Lsi06G002540 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi06G002540
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionMitochondrial ATP synthase subunit G protein
Locationchr06 : 2846054 .. 2850547 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAATTTTGTTTTAAAAAAAGGAAAAACGAAAAAGGAGGAGGAATTCTCGAAACGGCCCCTGCTGCGTATAGCGTCCTTCTTCTCATATCATTTTTCCATTTTCTCTCGTTCACTAACTCCGCAGAGCTCGCGGCGGCACAGTACAAGCTAGCGTTAGAAGGAAGAAGCGGCCAGCAATTCACTCCGCCTTTTCTCGATTTCTTCTTCATTTCTTTGATTTTGCATTTCCCAATCAGACATTCAAAGGTAAAGTTCTGCTACTCCCCTTCTTCTTCTTTATTTATTTATTTTTTGTATTTTTAACCATTTTTCGTCAGATCTCAATTCCATGTTTGCTGATGTGCTCTTTCGGTTTCGTAATTGTTAGATCTTTTATTTAGTATGATGGATTTTTGGGTGTGTTTTGTATTTGTTGAATTTTGAATCGTGGCTTCGTAGTCTCGATTTTCAAGGTTCAGTAATTAGGGAACCATCGTGAGATGATTTTTTTTTCAAGATGACATTGAATACTAGGTTTTTGTTTCTATGTTGAAATTAGAAATGAGTAGCTTATTCTGCTTAATTTGAGGGGAATTCCTTTTTCTTTTATTGTGTGGCGATTTTGGATTGTTTGATGCCGTAACGGAGTAGAGATCATACGCTGGAATGTGGTGTCTGTTTTGAGAGGATTTGGTTCTGGTTCTATTTTTGGCGCCATCATAAAGTCGCAGTCAGTGCAGTAGTTTATAGCATATATTTCTGATTCTCCATGTCTTGTTGTACTTCCTAAAAGTTCTGACAGCTATTATTAACGCTTCCTTGAGTAATAGTTACCTCTTTGAACTGTTCTGTAACTTTGGTCTGCTCCACACAACATTTTTACCCTAATAAAATTGGGAAAGAATGAACCACCATGGGTTGGCCTGGTCATCAAAATAATCATTAGCTCATAGAGAATTGAGTTTAAGGCATGTGGCCACCTACATGGAATTTAGTATCCTACGAGTTTTCTTGACAACCAAATGTAGTAGGGTTAGGAGCTAGGAGGTGGTCTGGAATCTCACGGATATAAAGAAAGGTGGAAAAATGAGTCTAGGCAGCTTCTATTTGGTAATGTTAGTTTTTTTGCAAGTTCAGCAAGTAGGAGTGAGTTTTCGAGCCTCCTTCAATGTACCGGAGCCTTATGGTGAGCTCTATTCTCACAAAGTTCCAATTCATTGATGAGTAAAACAAAAACGTCTTTTATTGATTTTGATTGTTTCATCAATGCAGTTTAAACTTTCTAAACAAATTTTGTTGTCTTTGTTCTTAACAAACTCAGTGATACTACCTTCCAATTCCAACATCAACATACTCATCTCTATCGATGTTTGCTCTCAAAGTTTAGAACCAGGGCCAGAACCATATCAGTACTGTAGGAATTAAAAATTGACGTAAAAATTCAAGAGTGTAGATTAATTTTTTGGAAGGAAAATACAAAGGTCTATAGCCTTTCAAGGGGATTATCTATCTCTTACATATCCTTCACTCAATGTTCCTTTATGTGTCTCCCTCTGATCACCCTAACAGTGCTATTTGTATCCATATTTACACCAATAAACCCACTAGCTATGAGTCTATGACTTATATACTCAGTGGTAACAATCCCATCAAAGTACTTTATCATACAATAAGTTATTTTGCGTGTACTGAGAATATTGAGTGGAGCTTCATATCATTTGTTATTAAATCCTTAATGGGGAGTTTTTAGTTTCTGGACTGCCTGGCAAAAGCTACCTTGCCCTTTTGATTGTACTGTTTGTTATCCCAACTTGGGCTTGTCGATCTCTCCTCTTATTTGGGCATGTAGTTCCTCTTGTAGTATATGGCCTATACTTTTTATTGCTCCTATCCATTATTCCACCTAACGCGTCTCTTTTTCCTACAAACTATCAACTCTTGTTTGAGTAATGGTTAGCTTGGTCCCCAAGTCCTATTGCTATTGTCACTTTACCTTCAACCATAAAATTGATCTGTTCTCGCACCTCAGTTTTACTGGAAATTTAATAAAGAGTGAGAAAAGTCCAGCCTTTTCTGCATCTCTTATGTTTTGTAAGTTGAGAGAGAGACAAACAGAGAGTTCTCAAACCTTTGCTTACACAGTATTTAAGCTACTACTCGATGGCCTTTGATGTATATTCAAAATTAAATTAGCATTCCTTCCCAGAATATTTTGTCAGTGATTCAGTGCCATCTCTTGCTAGTCAACTGAGTTCCTACTTTGGTAGTCTTTTAGCTTCATCTGTAGTGTTTTAGTTACCTGATGTTGAAACTATGGTGTCAAAGCTACTTAATACTTCAGGCAGGAGACACTATCTACAATATTTATTTATAGAGACCAAAACCTGGGAAGGGCATGGTGGTCATATGGTCCTAGGTTTAAGACCAAAATGTTGTGATGCCAAATGTCAAATGATAGTCCAAGTTTCAAATAATGGATTTTGAGCGCTTGATGAGTTTTGTTGCGAAGTAAAAGATTTGTAAATATATAAAGTAATATCATGATTTAGTTAATGAGGATTTTCTATAAACATCATTTTCACGTTCTTGAGTCTTCTTTTTTTAAAGAAACGATTTAATTGATGTATGAAATTTACAAAAGGGATGATTGATCTATGATAGTTACAAAAAGCTTTCCCAATTTGAAGAAAGGGAGGCATAACTATCAGAAACCTTGACTTCCTCGATTGTTACAACATCTCATATTTTTGTATGCTGCATTTCAGGGCATAAGACTTTAAACTAATGGCATCCAAGTTGACTCAGTTACAATCCAAGGCCACTCAAGCATCACAATTTGTGTTAAAGAATGGGTGTTCTTACTACAAGCAATTATTGGAACAAAACAAGCAATTTATTCAGGAACCACCTACAGTGGAGAAATGCAACGAGCTTTCTAAGCAACTATTTTACACTCGTCTTGCAAGGTCATAGTTTCTACACTCTCTTTATATTGGCATACTGTTTGACTTTATCGCTTTGCATCTTTTTGGAATTAGGAAAGAGTACCCATTCTTCCCATAATAATGCAGGACCTAGTTTTCCTTGGTCTGTTGGTGAAATATCGTCTGTGCTTAGTCATTTGTGTTCTTTAGTTTCATTTTTTCTAAATGTTTTCCTAGTTGTTTTTTTTTTTTCAATCCTACGTTTTTCTTCTCCTTTCCAGCCTTTCATCAACGTAGTTTCTGTCTTGTTGAGTCCCTTTTTACACATTTAATTTAATTTACTTTTCACTAATATAAATGTTTGGTACTTATGGTGCTGCGACCTTTATGAGTTTATATCAACTATTGTAGAGAAGAAAAAAAGTCAATTGATCCCAACAATATTTAAGAAGTGATTTAGTGGTCAATGTGTGACGCAGTGCTGGCTCTAAACTACAAAATTCATGTCTTTTAAGATTTTTCAATTATATATAGCATCAGCATATTGCATAATAAGTTTTTTTTTTTCACATTGATGTCCATAGATTTACTTTATGTATGGGATAATATTTAGAGTTCTCACTGATATCCTAGCATTTTTAACAATTTTAGAAATATATAACAGTGCTTTTAGAAGAAACGCACAATAAGTATCATAACAACTTTACATTTATATTTACTATGAACTTCCTTTGAATATAATTTATAATACCATACATATTATACAAATTAATCATTAAATTGAACACAATATATAAGCTCAACTGGAAATCTTTTCACATATGAGATACTCTAATGCATTCTTCTCATATTACGAGCTACATAACTTTTTCCAGTGCATGATGGTAAAACCTACTTTATTGTTGCCATCCGAAACTATATTCTTCTGTAATCTTCTTATATCCAAAGAAATATGAGCAAACTCCGTGTGTGAAACGTGAGGCCAAAAGAATATCATTTTGACATCATCCTATCAATGCAGTCTTCCAGGTCGGTACGAATCGTTCCATAAGGAACTTGATTATGTAAAACAATTATGGAAGAACAGACAAGAGCTGAAGGTGGAAGATGCTGGTATTGCTGCTCTATTTGGTCTGGAGTGCTTTGCATGGTTTTGTGCTGGTGAAATTGTGGGAAGGGGTTTTACTTTCACCGGATACTATGTCTGAGGTTTTCACTTTGGGAAAACATGGCTTTAGTTTCATCCTTAAGCTTCGCTTTCCTGCGTCGTCGTCGTTTGTACCATTCGAATGACTTGAATTCTGCATGAAATTTTGTTGCTTTCCTGCAAAATTTTTTAGAAGCTTAGTATTTGGTGAGGAAATCAGTTTACTTATTAATAATCCATGTATCCAGAGTAACTTGGATGGATAATGATGCTGTTGCTTTCTTTAATCTCCTGCAGAGTTTCTATCTTGAATCATGATAACTTTCAATTGAGTTCATATCATATACACTCTTTTGTTTTCATTTTGTATGAATTCACTGTTGAATTTCAAGTTGATTTAAGGACTTAGTTAATGAATCATTCCCTCTTCATTTACTCTTGG

mRNA sequence

TGAAATTTTGTTTTAAAAAAAGGAAAAACGAAAAAGGAGGAGGAATTCTCGAAACGGCCCCTGCTGCGTATAGCGTCCTTCTTCTCATATCATTTTTCCATTTTCTCTCGTTCACTAACTCCGCAGAGCTCGCGGCGGCACAGTACAAGCTAGCGTTAGAAGGAAGAAGCGGCCAGCAATTCACTCCGCCTTTTCTCGATTTCTTCTTCATTTCTTTGATTTTGCATTTCCCAATCAGACATTCAAAGGGCATAAGACTTTAAACTAATGGCATCCAAGTTGACTCAGTTACAATCCAAGGCCACTCAAGCATCACAATTTGTGTTAAAGAATGGGTGTTCTTACTACAAGCAATTATTGGAACAAAACAAGCAATTTATTCAGGAACCACCTACAGTGGAGAAATGCAACGAGCTTTCTAAGCAACTATTTTACACTCGTCTTGCAAGTCTTCCAGGTCGGTACGAATCGTTCCATAAGGAACTTGATTATGTAAAACAATTATGGAAGAACAGACAAGAGCTGAAGGTGGAAGATGCTGGTATTGCTGCTCTATTTGGTCTGGAGTGCTTTGCATGGTTTTGTGCTGGTGAAATTGTGGGAAGGGGTTTTACTTTCACCGGATACTATGTCTGAGGTTTTCACTTTGGGAAAACATGGCTTTAGTTTCATCCTTAAGCTTCGCTTTCCTGCGTCGTCGTCGTTTGTACCATTCGAATGACTTGAATTCTGCATGAAATTTTGTTGCTTTCCTGCAAAATTTTTTAGAAGCTTAGTATTTGGTGAGGAAATCAGTTTACTTATTAATAATCCATGTATCCAGAGTAACTTGGATGGATAATGATGCTGTTGCTTTCTTTAATCTCCTGCAGAGTTTCTATCTTGAATCATGATAACTTTCAATTGAGTTCATATCATATACACTCTTTTGTTTTCATTTTGTATGAATTCACTGTTGAATTTCAAGTTGATTTAAGGACTTAGTTAATGAATCATTCCCTCTTCATTTACTCTTGG

Coding sequence (CDS)

ATGGCATCCAAGTTGACTCAGTTACAATCCAAGGCCACTCAAGCATCACAATTTGTGTTAAAGAATGGGTGTTCTTACTACAAGCAATTATTGGAACAAAACAAGCAATTTATTCAGGAACCACCTACAGTGGAGAAATGCAACGAGCTTTCTAAGCAACTATTTTACACTCGTCTTGCAAGTCTTCCAGGTCGGTACGAATCGTTCCATAAGGAACTTGATTATGTAAAACAATTATGGAAGAACAGACAAGAGCTGAAGGTGGAAGATGCTGGTATTGCTGCTCTATTTGGTCTGGAGTGCTTTGCATGGTTTTGTGCTGGTGAAATTGTGGGAAGGGGTTTTACTTTCACCGGATACTATGTCTGA

Protein sequence

MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLFYTRLASLPGRYESFHKELDYVKQLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGYYV
BLAST of Lsi06G002540 vs. TrEMBL
Match: A0A0A0LYS9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G580240 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 3.1e-61
Identity = 117/122 (95.90%), Postives = 120/122 (98.36%), Query Frame = 1

Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLFYTRLA 60
           MASKL QLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQL YTRLA
Sbjct: 1   MASKLAQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDYVKQLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYE+FHKELDYVKQLWKNRQ+LKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYEAFHKELDYVKQLWKNRQDLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

BLAST of Lsi06G002540 vs. TrEMBL
Match: A5AY31_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g00810 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.3e-56
Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 1

Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLFYTRLA 60
           MASKL QLQSKA+QASQFV K+GC+YYKQL+EQNKQ+IQEPPTVEKCN LSKQLFYTRLA
Sbjct: 1   MASKLVQLQSKASQASQFVAKHGCAYYKQLMEQNKQYIQEPPTVEKCNLLSKQLFYTRLA 60

Query: 61  SLPGRYESFHKELDYVKQLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYE+F KELD VKQLWKNRQE+KVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYEAFWKELDCVKQLWKNRQEMKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

BLAST of Lsi06G002540 vs. TrEMBL
Match: E0CT31_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g04860 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 5.2e-56
Identity = 107/122 (87.70%), Postives = 117/122 (95.90%), Query Frame = 1

Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLFYTRLA 60
           MASKL QLQSKA QASQFV+K+GC+Y+KQLLEQNKQ++QEPPTVEKCN L+KQLFYTRLA
Sbjct: 1   MASKLQQLQSKAAQASQFVVKHGCAYHKQLLEQNKQYVQEPPTVEKCNLLAKQLFYTRLA 60

Query: 61  SLPGRYESFHKELDYVKQLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYESF KELDYVK +WKNRQELKVEDAGIAALFGLEC+AWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYESFWKELDYVKHMWKNRQELKVEDAGIAALFGLECYAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

BLAST of Lsi06G002540 vs. TrEMBL
Match: A5AHC7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001728 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 8.8e-56
Identity = 107/122 (87.70%), Postives = 116/122 (95.08%), Query Frame = 1

Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLFYTRLA 60
           MASKL QLQSKA QASQFV K+GC+Y+KQLLEQNKQ++QEPPTVEKCN L+KQLFYTRLA
Sbjct: 1   MASKLQQLQSKAAQASQFVXKHGCAYHKQLLEQNKQYVQEPPTVEKCNLLAKQLFYTRLA 60

Query: 61  SLPGRYESFHKELDYVKQLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYESF KELDYVK +WKNRQELKVEDAGIAALFGLEC+AWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYESFWKELDYVKHMWKNRQELKVEDAGIAALFGLECYAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

BLAST of Lsi06G002540 vs. TrEMBL
Match: A0A0D2R409_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G081200 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 3.3e-55
Identity = 109/121 (90.08%), Postives = 114/121 (94.21%), Query Frame = 1

Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLFYTRLA 60
           MASKL QLQSKA QAS+FV KNG +YYKQLLEQNKQ+IQEPPTVEKCNELSKQLFYTRLA
Sbjct: 1   MASKLQQLQSKACQASKFVAKNGTAYYKQLLEQNKQYIQEPPTVEKCNELSKQLFYTRLA 60

Query: 61  SLPGRYESFHKELDYVKQLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGR E+F KELDYVK LWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRNEAFWKELDYVKNLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 Y 122
           Y
Sbjct: 121 Y 121

BLAST of Lsi06G002540 vs. TAIR10
Match: AT2G19680.1 (AT2G19680.1 Mitochondrial ATP synthase subunit G protein)

HSP 1 Score: 205.7 bits (522), Expect = 1.6e-53
Identity = 101/121 (83.47%), Postives = 109/121 (90.08%), Query Frame = 1

Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLFYTRLA 60
           MASKL QLQSKA QAS+FV K+G SYYKQLLEQNKQ+IQEP T+EKC+ELSKQL YTRLA
Sbjct: 1   MASKLVQLQSKACQASKFVAKHGNSYYKQLLEQNKQYIQEPATIEKCSELSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDYVKQLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYE+F KE+DY K L KNR  LKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYETFRKEVDYAKNLLKNRANLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 Y 122
           Y
Sbjct: 121 Y 121

BLAST of Lsi06G002540 vs. TAIR10
Match: AT4G29480.1 (AT4G29480.1 Mitochondrial ATP synthase subunit G protein)

HSP 1 Score: 202.2 bits (513), Expect = 1.8e-52
Identity = 97/121 (80.17%), Postives = 108/121 (89.26%), Query Frame = 1

Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLFYTRLA 60
           MASKL Q+QSKA +AS+FV K+G SYY+QLLE+NKQ+IQEP TVEKC ELSKQL YTRLA
Sbjct: 1   MASKLIQVQSKACEASKFVAKHGTSYYRQLLEKNKQYIQEPATVEKCQELSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDYVKQLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYE+F KE+DY K LWKNR  LKVEDAGIAALFGLECFAW+CAGEI GRGFTFTGY
Sbjct: 61  SIPGRYETFWKEVDYAKNLWKNRSGLKVEDAGIAALFGLECFAWYCAGEIAGRGFTFTGY 120

Query: 121 Y 122
           Y
Sbjct: 121 Y 121

BLAST of Lsi06G002540 vs. TAIR10
Match: AT4G26210.1 (AT4G26210.1 Mitochondrial ATP synthase subunit G protein)

HSP 1 Score: 197.6 bits (501), Expect = 4.5e-51
Identity = 95/121 (78.51%), Postives = 110/121 (90.91%), Query Frame = 1

Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLFYTRLA 60
           MASKL QL+SKA +AS+FV K+G +YYKQLL++NK +IQEP T+EKCNELSKQL YTRLA
Sbjct: 1   MASKLLQLKSKACEASKFVSKHGTTYYKQLLDKNKMYIQEPATIEKCNELSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDYVKQLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGR ESF KE+++VK LWKNR +LKVEDAGIAALFGLECFAW+CAGEIVGRGFTFTGY
Sbjct: 61  SIPGRSESFWKEVNHVKGLWKNRADLKVEDAGIAALFGLECFAWYCAGEIVGRGFTFTGY 120

Query: 121 Y 122
           Y
Sbjct: 121 Y 121

BLAST of Lsi06G002540 vs. NCBI nr
Match: gi|449435822|ref|XP_004135693.1| (PREDICTED: uncharacterized protein LOC101205555 [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 4.5e-61
Identity = 117/122 (95.90%), Postives = 120/122 (98.36%), Query Frame = 1

Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLFYTRLA 60
           MASKL QLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQL YTRLA
Sbjct: 1   MASKLAQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDYVKQLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYE+FHKELDYVKQLWKNRQ+LKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYEAFHKELDYVKQLWKNRQDLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

BLAST of Lsi06G002540 vs. NCBI nr
Match: gi|659099884|ref|XP_008450823.1| (PREDICTED: uncharacterized protein LOC103492293 [Cucumis melo])

HSP 1 Score: 242.3 bits (617), Expect = 4.5e-61
Identity = 117/122 (95.90%), Postives = 120/122 (98.36%), Query Frame = 1

Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLFYTRLA 60
           MASKL QLQSKATQASQFVLKNGCSYYKQLLEQNKQ+IQEPPTVEKCNELSKQL YTRLA
Sbjct: 1   MASKLAQLQSKATQASQFVLKNGCSYYKQLLEQNKQYIQEPPTVEKCNELSKQLLYTRLA 60

Query: 61  SLPGRYESFHKELDYVKQLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYESFHKELDYVKQLWKNRQ+LKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYESFHKELDYVKQLWKNRQDLKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

BLAST of Lsi06G002540 vs. NCBI nr
Match: gi|225429460|ref|XP_002277333.1| (PREDICTED: uncharacterized protein LOC100267911 [Vitis vinifera])

HSP 1 Score: 226.1 bits (575), Expect = 3.3e-56
Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 1

Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLFYTRLA 60
           MASKL QLQSKA+QASQFV K+GC+YYKQL+EQNKQ+IQEPPTVEKCN LSKQLFYTRLA
Sbjct: 1   MASKLVQLQSKASQASQFVAKHGCAYYKQLMEQNKQYIQEPPTVEKCNLLSKQLFYTRLA 60

Query: 61  SLPGRYESFHKELDYVKQLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYE+F KELD VKQLWKNRQE+KVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYEAFWKELDCVKQLWKNRQEMKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

BLAST of Lsi06G002540 vs. NCBI nr
Match: gi|302143185|emb|CBI20480.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 224.9 bits (572), Expect = 7.4e-56
Identity = 107/122 (87.70%), Postives = 117/122 (95.90%), Query Frame = 1

Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLFYTRLA 60
           MASKL QLQSKA QASQFV+K+GC+Y+KQLLEQNKQ++QEPPTVEKCN L+KQLFYTRLA
Sbjct: 1   MASKLQQLQSKAAQASQFVVKHGCAYHKQLLEQNKQYVQEPPTVEKCNLLAKQLFYTRLA 60

Query: 61  SLPGRYESFHKELDYVKQLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYESF KELDYVK +WKNRQELKVEDAGIAALFGLEC+AWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYESFWKELDYVKHMWKNRQELKVEDAGIAALFGLECYAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

BLAST of Lsi06G002540 vs. NCBI nr
Match: gi|147770309|emb|CAN71304.1| (hypothetical protein VITISV_001728 [Vitis vinifera])

HSP 1 Score: 224.2 bits (570), Expect = 1.3e-55
Identity = 107/122 (87.70%), Postives = 116/122 (95.08%), Query Frame = 1

Query: 1   MASKLTQLQSKATQASQFVLKNGCSYYKQLLEQNKQFIQEPPTVEKCNELSKQLFYTRLA 60
           MASKL QLQSKA QASQFV K+GC+Y+KQLLEQNKQ++QEPPTVEKCN L+KQLFYTRLA
Sbjct: 1   MASKLQQLQSKAAQASQFVXKHGCAYHKQLLEQNKQYVQEPPTVEKCNLLAKQLFYTRLA 60

Query: 61  SLPGRYESFHKELDYVKQLWKNRQELKVEDAGIAALFGLECFAWFCAGEIVGRGFTFTGY 120
           S+PGRYESF KELDYVK +WKNRQELKVEDAGIAALFGLEC+AWFCAGEIVGRGFTFTGY
Sbjct: 61  SIPGRYESFWKELDYVKHMWKNRQELKVEDAGIAALFGLECYAWFCAGEIVGRGFTFTGY 120

Query: 121 YV 123
           YV
Sbjct: 121 YV 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LYS9_CUCSA3.1e-6195.90Uncharacterized protein OS=Cucumis sativus GN=Csa_1G580240 PE=4 SV=1[more]
A5AY31_VITVI2.3e-5689.34Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g00810 PE=4 SV=... [more]
E0CT31_VITVI5.2e-5687.70Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g04860 PE=4 SV=... [more]
A5AHC7_VITVI8.8e-5687.70Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001728 PE=4 SV=1[more]
A0A0D2R409_GOSRA3.3e-5590.08Uncharacterized protein OS=Gossypium raimondii GN=B456_010G081200 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G19680.11.6e-5383.47 Mitochondrial ATP synthase subunit G protein[more]
AT4G29480.11.8e-5280.17 Mitochondrial ATP synthase subunit G protein[more]
AT4G26210.14.5e-5178.51 Mitochondrial ATP synthase subunit G protein[more]
Match NameE-valueIdentityDescription
gi|449435822|ref|XP_004135693.1|4.5e-6195.90PREDICTED: uncharacterized protein LOC101205555 [Cucumis sativus][more]
gi|659099884|ref|XP_008450823.1|4.5e-6195.90PREDICTED: uncharacterized protein LOC103492293 [Cucumis melo][more]
gi|225429460|ref|XP_002277333.1|3.3e-5689.34PREDICTED: uncharacterized protein LOC100267911 [Vitis vinifera][more]
gi|302143185|emb|CBI20480.3|7.4e-5687.70unnamed protein product [Vitis vinifera][more]
gi|147770309|emb|CAN71304.1|1.3e-5587.70hypothetical protein VITISV_001728 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Vocabulary: Molecular Function
TermDefinition
GO:0015078hydrogen ion transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0000276mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
Vocabulary: INTERPRO
TermDefinition
IPR006808ATP_synth_F0_gsu_mt
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component GO:0005840 ribosome
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G002540.1Lsi06G002540.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006808ATPase, F0 complex, subunit G, mitochondrialPANTHERPTHR12386FAMILY NOT NAMEDcoord: 1..122
score: 1.0
IPR006808ATPase, F0 complex, subunit G, mitochondrialPFAMPF04718ATP-synt_Gcoord: 15..120
score: 1.7
NoneNo IPR availablePANTHERPTHR12386:SF14SUBFAMILY NOT NAMEDcoord: 1..122
score: 1.0

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi06G002540Csa2G000550Cucumber (Chinese Long) v2culsiB134
Lsi06G002540Csa1G580240Cucumber (Chinese Long) v2culsiB058
Lsi06G002540CSPI02G00540Wild cucumber (PI 183967)cpilsiB133
Lsi06G002540CSPI01G27850Wild cucumber (PI 183967)cpilsiB059
Lsi06G002540Cucsa.288520Cucumber (Gy14) v1cgylsiB471
Lsi06G002540Cucsa.116930Cucumber (Gy14) v1cgylsiB164
Lsi06G002540CmaCh11G006750Cucurbita maxima (Rimu)cmalsiB128
Lsi06G002540CmaCh05G013900Cucurbita maxima (Rimu)cmalsiB732
Lsi06G002540CmaCh10G007000Cucurbita maxima (Rimu)cmalsiB063
Lsi06G002540CmoCh05G013930Cucurbita moschata (Rifu)cmolsiB724
Lsi06G002540CmoCh10G007270Cucurbita moschata (Rifu)cmolsiB050
Lsi06G002540CmoCh11G006860Cucurbita moschata (Rifu)cmolsiB118
Lsi06G002540Cla016824Watermelon (97103) v1lsiwmB411
Lsi06G002540Cla011231Watermelon (97103) v1lsiwmB396
Lsi06G002540MELO3C015443Melon (DHL92) v3.5.1lsimeB396
Lsi06G002540MELO3C004618Melon (DHL92) v3.5.1lsimeB413
Lsi06G002540ClCG03G015840Watermelon (Charleston Gray)lsiwcgB364
Lsi06G002540ClCG11G001840Watermelon (Charleston Gray)lsiwcgB355
Lsi06G002540MELO3C004617.2Melon (DHL92) v3.6.1lsimedB438
Lsi06G002540MELO3C015443.2Melon (DHL92) v3.6.1lsimedB418
Lsi06G002540Cla97C11G208240Watermelon (97103) v2lsiwmbB359
Lsi06G002540Bhi02G001591Wax gourdlsiwgoB517
Lsi06G002540Bhi06G001426Wax gourdlsiwgoB478
Lsi06G002540Cp4.1LG04g10550Cucurbita pepo (Zucchini)cpelsiB563
Lsi06G002540Cp4.1LG11g11610Cucurbita pepo (Zucchini)cpelsiB093
Lsi06G002540Cp4.1LG07g10810Cucurbita pepo (Zucchini)cpelsiB683
Lsi06G002540CsGy1G027080Cucumber (Gy14) v2cgyblsiB055
Lsi06G002540CsGy2G000510Cucumber (Gy14) v2cgyblsiB123
Lsi06G002540Carg13016Silver-seed gourdcarlsiB086
Lsi06G002540Carg10812Silver-seed gourdcarlsiB519
Lsi06G002540Carg12267Silver-seed gourdcarlsiB034
Lsi06G002540CsaV3_2G001570Cucumber (Chinese Long) v3cuclsiB145
Lsi06G002540CsaV3_1G040150Cucumber (Chinese Long) v3cuclsiB068
Lsi06G002540CsaV3_UNG052430Cucumber (Chinese Long) v3cuclsiB343
The following gene(s) are paralogous to this gene:

None