Lsi06G002400 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi06G002400
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr06 : 2751091 .. 2755465 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACCTGAGAAGTGATGATCGCAAATGGAAGAGAGATCGGTGCCGAGAAATGGAAAGTAAAGAATTAAGGGCAGATCTGGTTGATAGGCGAATTGGATTCGGCTTTGCTTAGGCGTGTTGTTTTAGTGTAGGATGAGAGAGAGAGAGAGAGGAAGGAAGTTTCATAATTCATAGCCTTTTTCTTCACGGCGTTGACGGCGCCGTTGGATTCCACGACGGTCACACTTGGATTGGTCACAACTCTTGATGATAAAATATCCGTCTAGTTAGGCCAGCTAATCTCACGATAACTTGTCTGACTCTATAAATTTGAGTATCAGTGAAGTTAGTAGGATATTAATTGTTAAGTGGGTGGTCACCATAGATTAAACTCATGTTCTCTTAGTTATTTATTGAGACGGTTTTTCTTTTCTTTTTTTTTTTTTATCTCTAGGTCAACATATGATGATTTATTGATATATGGATAAATAAGAGAGTTTTACATCGATGTTAAAGATTAACTAATACTGATATTTTTTTTTAAGAAAAAAATGATAGTGATATTTTGTTGGTATAAATATTTTATCAATGTCCATCCATATATATTCTCAAAAATGAAAATTTGATATTGATATTATTATCGATATTTGTATTTTAATCATTTTTATGTGGTCATCAAATTCAGTTCCAATAAAATACAGTACAAATTACAATTGCATTTAATTTTTGAGACGATGAAGGTTAAATTACGGTTGATTTGATTGAAAAACAAAATATGAAAATAAGGAATTTTAATCAAAATATAAGGCATTCTTTAATTCGTGATTTGTTATGCCCAACTTTAAAATGGGTACATGAATAGACCGAGATCACATTTGAATAAGAGTGATGTTCAGTATATGAAAGTATGGTTAAGAAAAGCTTAAAAGAATCAAAAGTTACTATCTACGCCAATAAGCTTAGGATGCATGAATAGACCGAGATCGCATTTGTCTTTATGGATGCATAGATCGGCCAATGTTATGGGATAAACTATCGAGGCTCTAACTTAGGAGAACTCAAAGCATACTAACCCAAAAAATTACAAATCTCCTTGGCTAGTCCTTTAAGGTGAGCACTAACTACATAAAAGAGAACTGACTTATGAAGCTGGTGCAAACTGAGCTAAGGTATATATTGGAGAGGAAACATATAAACAAAAGGGTCAATTCCATAAGTAAGGTGTCCAATCTACCCTCAGCTCAACTAACTGATATTACGCAGGACTAAATACTAACTTAAGTATATGAGAGTACAAAACTTTTAATATCGGTCTTAAAAATGTTTATTTAAAACTTAAAAAATGGGGTTCAAACAAATCTTGATGCACTCAAATTAAAGATTAAAGATCACACAAATCTCTTACAAACAGTTTGCTAGCTCTCATCCTCCTCATTTGGTTTTCAACCCAATTTATAAAATTGGATATGATTTGGATAAATTACTAGAGGAAGAGGAAATCTTATGAAAACAAAGATCAAGAGAATGATTACTTAATTAGGATATCAAAATTTCAAGTTATTTCATCATGGATGCTCTTAAGTATTCGCAAGAAGATGATATGAACAATGCTCTTTTAGTTCATTTTCAAAAGAGGCAATTGTAAATATAACAATCAGATTCAAAGTATTAACATATATAACAATATTTTAAAAAAATTGCGAAAATGGTCTATCAGTGACACTAATAAACCATAAGAGTCTATCAGCGATAGAAGTTCATCATTGATAGATTTTGCTATATTTTCAATTTTTTTAAAATGTTATTTTATACTTGGTTATTATCTTTAAAATTGCTATGCATTACAATTACCCTTTTAAAAAACAAGGAGTTAAAATTTCCCTTGGGCAAATGTTCCCACCAAAACTCCTAACATGATTGCTTTTATTCCAATGGTATTGCCGTATTGGTTAATAGTTGGTGATCAAACTACTTTTTAATCATCCAAGCTCTACTAAAACCATTCTTCAATCTTTGATCTTAGGCCTATAAGTGATTGTAATGTCTTTATAAATATGTATTTAAAGTTATTGCTAATAGGTTGAATCCTATTTTAAATTCGATTTTTCTTCTTCTCAATTTGCTTTTATCCTTCTCGTGCTATTGCTAATAAACAATATTATTCTTATCCATAAGTGTATTAACTATTACTAAGAAAAACTTTGGTAAAACGTTGTTATCTGCTTTTAAATTAGATATGAGTAAGATTTTTGACAGAGTCGAGTATGTTTTTCTTTTCTTTCAAAAAACTTACCATGCTTAAGCTTGACTTTAAAATTGGTTAGTTTGATTATAAAATGTTTAGCCTTTGTTTCTTTCTCGCTTTTGATTGATGGTAAAGTCAAGGATAACATTAAGACATGGGAGATCCTTTATCCCTTGTCTTCTCCTCCTTTGCTTCCAAGGTGTCTCAAACTCTTTTGAATTTTGTAATTTGTACCACAAAACTTTTAAGTATTAATTTTTAGGTCTTATTTGATAATTGTCTTCAGGACAGTGCTTATTAGAAGCATACCTTAATTATGTTTTGAATCTCCAAAGATTTTGAGATTTTTTCAAGTATTTGGTTATTTCATATCTAAGCCTTGTTACATCATCTTGTTTACATTTGAGTTTGAATATTATACATTGAGTGCATTGTTTCTAGTTAAGGTAGTTAAGGTGTAATCAATTTGCTAGTGTATTCAGACTTATATATCATTTTCCTCAATAGTTCCAAAGTTTCAAACTTTTACAAAATATCAAATATGGGAGGGTGTCTGATATGCTTTTAAAGTTAAAAAAAAAAAAATTTATTAGACACAAAATTAAGTATATATCACTTGGTACACACTTTTAAAGTTCAGAGAGATTTTAGATTCAAGACAAAAAGTTCAACAACCTGTTAAACACAAAACTAAAATAATTTTGTTATGTTTAAAATCACTAAAATATTGTCTTTGAACATTCCAAATCAATTTAAAGTTTGACTTTATACTTTTAAATGCAAGTTTCATACCATTATGATTAATTTGAAGTCATTAAAGGTATTTTTCGAAGATTTTAAAACTGACAAAATGAATTTAACCGTTTCAACATCACTTTCAAACTTGGAACAGGGCAACGTTTGGGAGTGATTTTGGCATGGTCAAAAACATTTTCTCCCTTGCCAAAATCACTTCACTTTAAAAAGGATGATGTTTGGCATTGAATAAAATTGATTTTACGAAAATCTAAAATTATTTTAAATTAATTAGGAAGAATTAGTGGGTAGGTGATTTTTGTTGGGGTGAATGACTAGGATTAGGCCTAAAAATGGTTATATAGTTTAACTTCGTTAAAATATTGTTGGTTAGTTATTCATGAAATCAATATTTTTTTCATTTAAATAATCATTGACCACAAAATGACAATCAATTTTTTAAAACATAAATGCATCAACGGAAACAAACACCATCAACAAACACTAAAACTATCAGACCCTTCGAGAACAAGAAGAACAAAAGTTGGAAAGACATCTTTTCCGACCTAGGATAACCCAACAATGGAAGACAAAAAAGCTAAATTGTGAATTACTTTGTTCTCCTCTCTAGAGACCTTACAAAAATTAAAAATATTTACACAAGATGACGATCATCTAAGTATTTAGATGATACAAACAACTAAATTGAATGAAAAATATATTTTGAATTTTTTTTTTTTTTTTTTGAGGTTTATCATACGCATTTTTCTTATAAAACATATCAATCATATATATAAAAGTTTAACAATAAAACGAAAGAAAAAAATAAGAACTCATTTGGATTGACTAAAGAAAAAAGTGTTTTTTTTTTAAAAAAAAGTCGTTATTATTTAAACTCTTCTGATAAAATTTTTTAAAAAAAAGTGTTGCAAAAGCTATTTTGGGTGGTTGTCAAATACTCTAATTTTTTTTTTTAAATAGCTTATTTTCAAAATTAAATACTTGAAAAGTTAAACCAAACGCACCTAAAATTAATAAAAGTAGAAATACTCTTTTTAGTAATTTGATTACTCTAAAAACACTTTTGTTAAAAGGTACTCTAAAATCACTTTTGGAACCAAACACATATATGTTCTTGATAATTTTCATCCTTATATATCATTTTTAAATGTTAAATGATCCATAGGTATTTAATTTGTTCTAACTTATAAAAAAAGTAAACAAATAAATTTTCGTCAAAGCATACATAACTCAATTGATATGCAATATGTGTTAACGTCTACTAATATATTTTTCAGAAGGAAAAAAAATGTCTTTGGCTCATTACAACGATCTACTAGATCGTGTACTTAAGCATCGTGGTGCTGATAAGGTCGAGATTGTAGTTGTCTGTCTTCAATTTGCCGGCCGATAA

mRNA sequence

ATGTACCTGAGAAGTGATGATCGCAAATGGAAGAGAGATCGGTGCCGAGAAATGGAAAGTAAAGAATTAAGGGCAGATCTGAAAAACTTTGGTAAAACGTTGTTATCTGCTTTTAAATTAGATATGAAAGGAAAAAAAATGTCTTTGGCTCATTACAACGATCTACTAGATCGTGTACTTAAGCATCGTGGTGCTGATAAGGTCGAGATTGTAGTTGTCTGTCTTCAATTTGCCGGCCGATAA

Coding sequence (CDS)

ATGTACCTGAGAAGTGATGATCGCAAATGGAAGAGAGATCGGTGCCGAGAAATGGAAAGTAAAGAATTAAGGGCAGATCTGAAAAACTTTGGTAAAACGTTGTTATCTGCTTTTAAATTAGATATGAAAGGAAAAAAAATGTCTTTGGCTCATTACAACGATCTACTAGATCGTGTACTTAAGCATCGTGGTGCTGATAAGGTCGAGATTGTAGTTGTCTGTCTTCAATTTGCCGGCCGATAA

Protein sequence

MYLRSDDRKWKRDRCREMESKELRADLKNFGKTLLSAFKLDMKGKKMSLAHYNDLLDRVLKHRGADKVEIVVVCLQFAGR
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G002400.1Lsi06G002400.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi06G002400Silver-seed gourdcarlsiB034
Lsi06G002400Silver-seed gourdcarlsiB086
Lsi06G002400Silver-seed gourdcarlsiB180
Lsi06G002400Silver-seed gourdcarlsiB519
Lsi06G002400Silver-seed gourdcarlsiB817
Lsi06G002400Cucumber (Chinese Long) v3cuclsiB068
Lsi06G002400Cucumber (Chinese Long) v3cuclsiB145
Lsi06G002400Watermelon (97103) v2lsiwmbB359
Lsi06G002400Watermelon (97103) v2lsiwmbB365
Lsi06G002400Watermelon (97103) v2lsiwmbB382
Lsi06G002400Wax gourdlsiwgoB478
Lsi06G002400Wax gourdlsiwgoB484
Lsi06G002400Wax gourdlsiwgoB517
Lsi06G002400Bottle gourd (USVL1VR-Ls)lsilsiB059
Lsi06G002400Bottle gourd (USVL1VR-Ls)lsilsiB163
Lsi06G002400Cucumber (Gy14) v1cgylsiB164
Lsi06G002400Cucumber (Gy14) v1cgylsiB471
Lsi06G002400Cucurbita maxima (Rimu)cmalsiB063
Lsi06G002400Cucurbita maxima (Rimu)cmalsiB128
Lsi06G002400Cucurbita maxima (Rimu)cmalsiB179
Lsi06G002400Cucurbita maxima (Rimu)cmalsiB253
Lsi06G002400Cucurbita maxima (Rimu)cmalsiB444
Lsi06G002400Cucurbita maxima (Rimu)cmalsiB732
Lsi06G002400Cucurbita moschata (Rifu)cmolsiB050
Lsi06G002400Cucurbita moschata (Rifu)cmolsiB118
Lsi06G002400Cucurbita moschata (Rifu)cmolsiB169
Lsi06G002400Cucurbita moschata (Rifu)cmolsiB241
Lsi06G002400Cucurbita moschata (Rifu)cmolsiB433
Lsi06G002400Cucurbita moschata (Rifu)cmolsiB724
Lsi06G002400Cucurbita pepo (Zucchini)cpelsiB093
Lsi06G002400Cucurbita pepo (Zucchini)cpelsiB305
Lsi06G002400Cucurbita pepo (Zucchini)cpelsiB563
Lsi06G002400Cucurbita pepo (Zucchini)cpelsiB683
Lsi06G002400Wild cucumber (PI 183967)cpilsiB059
Lsi06G002400Wild cucumber (PI 183967)cpilsiB133
Lsi06G002400Cucumber (Chinese Long) v2culsiB058
Lsi06G002400Cucumber (Chinese Long) v2culsiB134
Lsi06G002400Melon (DHL92) v3.5.1lsimeB396
Lsi06G002400Melon (DHL92) v3.5.1lsimeB411
Lsi06G002400Melon (DHL92) v3.5.1lsimeB413
Lsi06G002400Watermelon (Charleston Gray)lsiwcgB355
Lsi06G002400Watermelon (Charleston Gray)lsiwcgB364
Lsi06G002400Watermelon (Charleston Gray)lsiwcgB381
Lsi06G002400Watermelon (97103) v1lsiwmB396
Lsi06G002400Watermelon (97103) v1lsiwmB401
Lsi06G002400Watermelon (97103) v1lsiwmB411
Lsi06G002400Cucumber (Gy14) v2cgyblsiB055
Lsi06G002400Cucumber (Gy14) v2cgyblsiB123
Lsi06G002400Melon (DHL92) v3.6.1lsimedB418
Lsi06G002400Melon (DHL92) v3.6.1lsimedB434
Lsi06G002400Melon (DHL92) v3.6.1lsimedB438