Lsi06G002140 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCGCCTTTCCTTCTTCAAATGCGTGTGGCTTCTACCTATATATCTTCTCACACGTGTCGATTTTGTATCTGTCCATTTTTTCCCCTTTTTTATCTCTCCCTTCTTCCTCTTCCTTTTATTCTCTCTCTTTTTCCTCTCTTTTCTCTTCCTTCCTTCCCCGCCTCCGCCATGGACGACGCCTCCTCCGACAACGACCACCACGACCTCGACTTTACATCCACCAGTTCCGGTTTATCATCCATACTCAGCACCGACGATTTCCGAAGCTCCTCTAGTTCTGGCGACGTCTCCGTCACCAGCACTAGTTCTGGCGAGATTCCGGCTGTTATTGTAGCGGAGGCTGCTATGGAGACGAGGTCCGTAGACCTTACAACGCCGGTATCGGAACCGGCGAGACGGAAGTGCATCGGGAGGACGAATAGGGCGGGACTACACTGGGGACTTACTTCGGTTATCGGAAGGCGGAGGGAGATGGAGGACGCTATCGCTGTTAAGCCAGGATTCATGTCTTCCAGATGCGATCACGTCGGAGGTTGTACGGCTCCAGGTTCTAGAACCTCCGGAGAGATCTCGCCCCTCCATTTCTTCGCCGTGTACGACGGTCACGGTGGCTCTCAGGTGTGTACGTTCTCTTCAATTTCTATCGCCTTTCTATGAATTTATGCATTTCGAATTTCGAATTTCAAATTAGGGCTAATTTTAGGTTTGACCTTCTGATAAAATTACAAGCATTAACCAGAAAGAGCTAGAAAGAAGAGAACTCTAATTCTTCTTTTTTTTTTTTTTTAATTTATTTTCGAGAGAAATAATCTCAAAAATAATAATTCGCAGATAACCAGTTTTAGAAAAATATTTTATGTTGACACAGCATTACCTATTACTATTATTACTTTTTTTCTTCGAAGCTAATAATTGCTTTTTCCACTAAGGAACGACACATGTCATTCAATGAGTGGTCCCCCTACGAAAGAATTTTGGAGGTTCCCATTTTAGTATAAGGACACGTGTCGTTGAAGCCCTCTTTTTTTCTCCCTTTTTCTTTTGTTCTCTTCAATCAGTTTCGTGGTTAGGTATGGGAAAAAAATGATCTATTTTAATAAATGACCTTGAGAAATCACTGGGATTTAAAGTTTATTATGACGTAATAATGTATTTTCCTGATGACGAAAAAATGGGGTGTTATTGTTTTATATATTATCTGACGTGTTTTAATCACGGGATGAATTGGTTTTATTAATAATAAGAATTACAAATTCTGAGGAAGTCGCACGATTTCCAATTGCTTTATTATTGGGGGTGGTCTCGTTTGTATCTTTTTCTTCATTCAGTGAATCATGAATGGCGCGTTTAATTAGAAGAAAACAAGAAATCTGTTTTTTTTTTTTATTTCACGTTTTTATTGCCCTCGAATGGGAGTTTTCTGTCGGCTTTGAGGATTTTTTTTTAATATTAAATTTTGAATTTGATAGTACTCTTTTTTTTTTTTATTCTATTAAAATTGTAGCCTAAGCTAACAAAAAAAATATAGGATAATTTTTTAGAAATAGAAAAATAAGGGAAACTATTTACACAAAACAACAAAATTTTTAGATAGTTGTGATAGACGTTGATAAATCAGTGATATGAATGATAGAAGTCTATCAACGTCTATCAATATTTTTTTTTGCTATTTTCTGTAAATAGTTTGACATTTTTTCTATTTGTGAAAATTTCTCAAGAATTTATCTATTAAGCAAAAACGATTGCATCGTTAAATCGAAATTTTATCTTAAGTGTTTACCAATCCGTACTAAAAATTGGTGTAATTGTAATGAGATTCCATTGATAGATGGTCATAATCGCAAGTATAATTTGATTATTGTTTTGTCACGTTTACTTAAAATTATGAGTCTGTAACATTTACTGTTAAACGGTAACAATAACAGTAATTGTGACAGATTCTGTGATTCTCATGTTGTAATAGTACAATAACGGTAATCGTAATAGTAATGATAACATGATTTTTAAACACAATCAAATGGATCACCTTCTCCTCTTCAATCGGATTGCACTTTTTAATTATAGATTTAGAAATGGATCTTAGATGTTAGTATGGATATGGAGCACAAGTAAACAACACCAAACGTAATTAATTGGAATCCACCCTAAGATTACAATCTGCCTTAATTCGTTTTAGAAAATCATCTCTAAGAAAAATGTTTTTTTATTCCACCAACCGACCGACCACATAGCAAGAAAGTTAAATAATGAAGACTTTTCAAAAAAGTTTGGAAACTTAAATAATGAAGACTTTTCAAAATAGTTTGGAAACTACCACCATATTTTATAAACATCACATAATATTACTAATATTCTATATTGAATGATGCACGCCCACCCATATGCCAGAAGAAAAAAAAAGGTTTATTTTGGGCCAGGTGAGTAGATAACTGCGGACAATGTTCCCCAATAGCTGCTCTATCCACCCAAGAATCAAGATCTGGGTGCATGATTTCCAGCCATGGTTTATGATTTTTGGATTCATGGGAAGTTGGAAATTTTAGATCATAATTCATTTGAATAATTGAAGTCGTTGCGTAGATTTATGTGCTTCACAAAAAGAGTAGTTAAACATCTCATTTTGTAAAAGTATGTCATTATGGTTGATTGTTTAACTGGGTTCTTTCTTAAATCCATTGGTTGTGCTGTGTTTTTGAATGCTAGATATGTTGATTTATGCTGGTACTGATTTCTTCCGGCGTGGATTCGTCGGATTTATGATCTTTTCAGATAACTGACACCCAGCTAACGACTTCGTGGAAACTTTAACATATATATATAATCTATAGGTGGCCAAATTCTGTGCGGAGAGAATGCATGAAGTGATAGCGGAAGAGTGGGGAAGAGAAGGAATCAACGGCCATGAATGGCAGAGGAGGTGGGAAGTTGCTTTCTCTAATGGCTTCCAGAGGACTGATAATGAGGTGGTATCAGAGGCAGTGGCAACCGACATGGTTGGATCTACTGCAGTTGTAGTCGTTCTATCTGCCTGCCAGATTATTGCATCCAATTGCGGTGACTCTCGGGCGGTTCTTTGTCAAAGGAATAAAGCAATTCCATTGACAGTGGATCAAAAGGTCATTAGTTTCCCAACCGCATTATGATTTAATTACTTCTTTTAGAGAAATCATTAAGGGAAAGCATTTGTTTTATTGATCGTGTTACAGCCTGACAGACAGGATGAACTCATGAGAATTGAAAGAGATGGAGGCAAAGTCATAAACTGGATGGGTGCTAGAGTGCTTGGAGTTCTTGCCATGTCAAGAGCCATAGGTTTCCACCTCTTTCCCTCTCTCTCTCACACACACATCTTGTCCTTAGTGGATGTTACCTTACCTTAATTTCGATTCTTTATTAATCAGAACTATCAGAGATCATATACGTGTCTATTCTTGGATGATTTTTCAATTTTGAAGACTATTCCAATTTCCACTGTGAGTATAGCCATGTTAGCATGGCTTATGTGCCTCTACTTGTAGAGTGTCTCCCAATTATTTCCATTTCTACTGTAACTGATAATAGGAAAAAGTAAGGATGTGAGTGAGATTTGACAGAAATTGGGATCCAATGATTCTCCACAGTCCACCCTCATTTACGTCCATTGTGCTTTTCCATGGAATAGTCCTGTATTATCACAGAATTACATACATTTGCAGGTTGCATTTACTCTAAGCTTGACAAATTGGCTTTATGTGTATGGATGTTCAGGGGATCGATATCTTCGGCCGTGGATAATTCCGGTGCCGGAGATTAGTTTCACAACAAGGAGTGATGAGGATGAATGTTTGGTTCTAGCAAGCGATGGACTTTGGGATGTAATGACGAATGAAGAAGTTGGGCAGGTGGCTTGCCATCTTCTTAGGCGGCTTCGCAGGTCGTCGTCGACGACGACGGACGACACACCTCCAGCACAGATTGTGGCTAATAATCTCACTGAAATAGCATATGGAAGAAACAGTTCTGATAACATTTCTGTTATTGTCATCGATCTGAAAGCAAGGAGAGCAAACACACAGAGGCAATGACAGAACATGATGTCTGGAAGGCAAGGTTCTAATAACTTCACCCTGTTCTCTTCCATAACTAATAGATAGCATAATACCATCTTTGTTTTCTTCACTGTTCTCACCACTCTCCATCAAAAACATGTACAGAGCTCACTAACAAAAATGAAAAATCTGCTTTGCTTGGTCACAGAGAGAAATTGTTCTCTCTCTAAAACCTTCCTATCAATTTGAATTGATTTTTCTTTTCTTTTCTTTCAATAGTAGAGAATGTATCTTGGACACAAGTCCATGAAGATGATCATGATAAAGAAAAGAAAGATTTAAACCATCAACCTACTTTATCAGCGATATTTCATAAAATATATAAACTTGAACGGCAGTACATTCAATCTCTTATTTAATGTATCTTGGACACAAGTTCATTAGATTTTTGAAGATTTTTTTTGGATAAATTTAACATTGTAGTACATTCTCTCTTATTTAATTTTCGTAATATTTATAATTAAAATATTAACGGAAAATAAAATGAATTTAAT ATCGCCTTTCCTTCTTCAAATGCGTGTGGCTTCTACCTATATATCTTCTCACACGTGTCGATTTTGTATCTGTCCATTTTTTCCCCTTTTTTATCTCTCCCTTCTTCCTCTTCCTTTTATTCTCTCTCTTTTTCCTCTCTTTTCTCTTCCTTCCTTCCCCGCCTCCGCCATGGACGACGCCTCCTCCGACAACGACCACCACGACCTCGACTTTACATCCACCAGTTCCGGTTTATCATCCATACTCAGCACCGACGATTTCCGAAGCTCCTCTAGTTCTGGCGACGTCTCCGTCACCAGCACTAGTTCTGGCGAGATTCCGGCTGTTATTGTAGCGGAGGCTGCTATGGAGACGAGGTCCGTAGACCTTACAACGCCGGTATCGGAACCGGCGAGACGGAAGTGCATCGGGAGGACGAATAGGGCGGGACTACACTGGGGACTTACTTCGGTTATCGGAAGGCGGAGGGAGATGGAGGACGCTATCGCTGTTAAGCCAGGATTCATGTCTTCCAGATGCGATCACGTCGGAGGTTGTACGGCTCCAGGTTCTAGAACCTCCGGAGAGATCTCGCCCCTCCATTTCTTCGCCGTGTACGACGGTCACGGTGGCTCTCAGATAACTGACACCCAGCTAACGACTTCGTGGAAACTTTAACATATATATATAATCTATAGGTGGCCAAATTCTGTGCGGAGAGAATGCATGAAGTGATAGCGGAAGAGTGGGGAAGAGAAGGAATCAACGGCCATGAATGGCAGAGGAGGTGGGAAGTTGCTTTCTCTAATGGCTTCCAGAGGACTGATAATGAGGTGGTATCAGAGGCAGTGGCAACCGACATGGTTGGATCTACTGCAGTTGTAGTCGTTCTATCTGCCTGCCAGATTATTGCATCCAATTGCGGTGACTCTCGGGCGGTTCTTTGTCAAAGGAATAAAGCAATTCCATTGACAGTGGATCAAAAGCCTGACAGACAGGATGAACTCATGAGAATTGAAAGAGATGGAGGCAAAGTCATAAACTGGATGGGTGCTAGAGTGCTTGGAGTTCTTGCCATGTCAAGAGCCATAGGGGATCGATATCTTCGGCCGTGGATAATTCCGGTGCCGGAGATTAGTTTCACAACAAGGAGTGATGAGGATGAATGTTTGGTTCTAGCAAGCGATGGACTTTGGGATGTAATGACGAATGAAGAAGTTGGGCAGGTGGCTTGCCATCTTCTTAGGCGGCTTCGCAGGTCGTCGTCGACGACGACGGACGACACACCTCCAGCACAGATTGTGGCTAATAATCTCACTGAAATAGCATATGGAAGAAACAGTTCTGATAACATTTCTGTTATTGTCATCGATCTGAAAGCAAGGAGAGCAAACACACAGAGGCAATGACAGAACATGATGTCTGGAAGGCAAGGTTCTAATAACTTCACCCTGTTCTCTTCCATAACTAATAGATAGCATAATACCATCTTTGTTTTCTTCACTGTTCTCACCACTCTCCATCAAAAACATGTACAGAGCTCACTAACAAAAATGAAAAATCTGCTTTGCTTGGTCACAGAGAGAAATTGTTCTCTCTCTAAAACCTTCCTATCAATTTGAATTGATTTTTCTTTTCTTTTCTTTCAATAGTAGAGAATGTATCTTGGACACAAGTCCATGAAGATGATCATGATAAAGAAAAGAAAGATTTAAACCATCAACCTACTTTATCAGCGATATTTCATAAAATATATAAACTTGAACGGCAGTACATTCAATCTCTTATTTAATGTATCTTGGACACAAGTTCATTAGATTTTTGAAGATTTTTTTTGGATAAATTTAACATTGTAGTACATTCTCTCTTATTTAATTTTCGTAATATTTATAATTAAAATATTAACGGAAAATAAAATGAATTTAAT ATGCATGAAGTGATAGCGGAAGAGTGGGGAAGAGAAGGAATCAACGGCCATGAATGGCAGAGGAGGTGGGAAGTTGCTTTCTCTAATGGCTTCCAGAGGACTGATAATGAGGTGGTATCAGAGGCAGTGGCAACCGACATGGTTGGATCTACTGCAGTTGTAGTCGTTCTATCTGCCTGCCAGATTATTGCATCCAATTGCGGTGACTCTCGGGCGGTTCTTTGTCAAAGGAATAAAGCAATTCCATTGACAGTGGATCAAAAGCCTGACAGACAGGATGAACTCATGAGAATTGAAAGAGATGGAGGCAAAGTCATAAACTGGATGGGTGCTAGAGTGCTTGGAGTTCTTGCCATGTCAAGAGCCATAGGGGATCGATATCTTCGGCCGTGGATAATTCCGGTGCCGGAGATTAGTTTCACAACAAGGAGTGATGAGGATGAATGTTTGGTTCTAGCAAGCGATGGACTTTGGGATGTAATGACGAATGAAGAAGTTGGGCAGGTGGCTTGCCATCTTCTTAGGCGGCTTCGCAGGTCGTCGTCGACGACGACGGACGACACACCTCCAGCACAGATTGTGGCTAATAATCTCACTGAAATAGCATATGGAAGAAACAGTTCTGATAACATTTCTGTTATTGTCATCGATCTGAAAGCAAGGAGAGCAAACACACAGAGGCAATGA MHEVIAEEWGREGINGHEWQRRWEVAFSNGFQRTDNEVVSEAVATDMVGSTAVVVVLSACQIIASNCGDSRAVLCQRNKAIPLTVDQKPDRQDELMRIERDGGKVINWMGARVLGVLAMSRAIGDRYLRPWIIPVPEISFTTRSDEDECLVLASDGLWDVMTNEEVGQVACHLLRRLRRSSSTTTDDTPPAQIVANNLTEIAYGRNSSDNISVIVIDLKARRANTQRQ
BLAST of Lsi06G002140 vs. Swiss-Prot
Match: P2C06_ORYSJ (Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=1 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 1.9e-57 Identity = 126/242 (52.07%), Postives = 161/242 (66.53%), Query Frame = 1
BLAST of Lsi06G002140 vs. Swiss-Prot
Match: P2C56_ARATH (Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2) HSP 1 Score: 212.2 bits (539), Expect = 5.8e-54 Identity = 118/237 (49.79%), Postives = 152/237 (64.14%), Query Frame = 1
BLAST of Lsi06G002140 vs. Swiss-Prot
Match: P2C53_ORYSJ (Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 9.9e-54 Identity = 119/245 (48.57%), Postives = 160/245 (65.31%), Query Frame = 1
BLAST of Lsi06G002140 vs. Swiss-Prot
Match: P2C16_ARATH (Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 2.4e-52 Identity = 117/248 (47.18%), Postives = 155/248 (62.50%), Query Frame = 1
BLAST of Lsi06G002140 vs. Swiss-Prot
Match: P2C77_ARATH (Protein phosphatase 2C 77 OS=Arabidopsis thaliana GN=ABI2 PE=1 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.6e-51 Identity = 115/240 (47.92%), Postives = 145/240 (60.42%), Query Frame = 1
BLAST of Lsi06G002140 vs. TrEMBL
Match: A0A0A0M1Q8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G574880 PE=3 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 1.8e-118 Identity = 218/228 (95.61%), Postives = 223/228 (97.81%), Query Frame = 1
BLAST of Lsi06G002140 vs. TrEMBL
Match: M5VQQ7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006926mg PE=3 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 1.0e-97 Identity = 176/228 (77.19%), Postives = 201/228 (88.16%), Query Frame = 1
BLAST of Lsi06G002140 vs. TrEMBL
Match: W9QYN5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010877 PE=3 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 2.4e-94 Identity = 176/230 (76.52%), Postives = 199/230 (86.52%), Query Frame = 1
BLAST of Lsi06G002140 vs. TrEMBL
Match: V7CQA5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G309100g PE=3 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 2.6e-93 Identity = 171/227 (75.33%), Postives = 198/227 (87.22%), Query Frame = 1
BLAST of Lsi06G002140 vs. TrEMBL
Match: A0A067FSY4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016186mg PE=3 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 4.9e-92 Identity = 176/228 (77.19%), Postives = 197/228 (86.40%), Query Frame = 1
BLAST of Lsi06G002140 vs. TAIR10
Match: AT4G26080.1 (AT4G26080.1 Protein phosphatase 2C family protein) HSP 1 Score: 212.2 bits (539), Expect = 3.3e-55 Identity = 118/237 (49.79%), Postives = 152/237 (64.14%), Query Frame = 1
BLAST of Lsi06G002140 vs. TAIR10
Match: AT1G72770.1 (AT1G72770.1 HYPERSENSITIVE TO ABA1) HSP 1 Score: 206.8 bits (525), Expect = 1.4e-53 Identity = 117/248 (47.18%), Postives = 155/248 (62.50%), Query Frame = 1
BLAST of Lsi06G002140 vs. TAIR10
Match: AT5G57050.1 (AT5G57050.1 Protein phosphatase 2C family protein) HSP 1 Score: 204.1 bits (518), Expect = 8.9e-53 Identity = 115/240 (47.92%), Postives = 145/240 (60.42%), Query Frame = 1
BLAST of Lsi06G002140 vs. TAIR10
Match: AT3G11410.1 (AT3G11410.1 protein phosphatase 2CA) HSP 1 Score: 201.8 bits (512), Expect = 4.4e-52 Identity = 107/183 (58.47%), Postives = 135/183 (73.77%), Query Frame = 1
BLAST of Lsi06G002140 vs. TAIR10
Match: AT1G17550.1 (AT1G17550.1 homology to ABI2) HSP 1 Score: 195.7 bits (496), Expect = 3.2e-50 Identity = 118/245 (48.16%), Postives = 150/245 (61.22%), Query Frame = 1
BLAST of Lsi06G002140 vs. NCBI nr
Match: gi|449435774|ref|XP_004135669.1| (PREDICTED: probable protein phosphatase 2C 6 [Cucumis sativus]) HSP 1 Score: 433.3 bits (1113), Expect = 2.6e-118 Identity = 218/228 (95.61%), Postives = 223/228 (97.81%), Query Frame = 1
BLAST of Lsi06G002140 vs. NCBI nr
Match: gi|659099791|ref|XP_008450778.1| (PREDICTED: probable protein phosphatase 2C 6 [Cucumis melo]) HSP 1 Score: 433.0 bits (1112), Expect = 3.4e-118 Identity = 219/228 (96.05%), Postives = 222/228 (97.37%), Query Frame = 1
BLAST of Lsi06G002140 vs. NCBI nr
Match: gi|645274771|ref|XP_008242497.1| (PREDICTED: protein phosphatase 2C 56-like [Prunus mume]) HSP 1 Score: 365.2 bits (936), Expect = 8.6e-98 Identity = 176/228 (77.19%), Postives = 201/228 (88.16%), Query Frame = 1
BLAST of Lsi06G002140 vs. NCBI nr
Match: gi|595804224|ref|XP_007202122.1| (hypothetical protein PRUPE_ppa006926mg [Prunus persica]) HSP 1 Score: 364.4 bits (934), Expect = 1.5e-97 Identity = 176/228 (77.19%), Postives = 201/228 (88.16%), Query Frame = 1
BLAST of Lsi06G002140 vs. NCBI nr
Match: gi|703094735|ref|XP_010095347.1| (putative protein phosphatase 2C 6 [Morus notabilis]) HSP 1 Score: 353.2 bits (905), Expect = 3.4e-94 Identity = 176/230 (76.52%), Postives = 199/230 (86.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |