Lsi06G001940 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G001940
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Kinesin-like protein
Location	chr06 : 2134818 .. 2135402 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAAGCTCAAGAGGAATGCCAAAAAGTCAAGAACCAAATACAGAAGGCCGAGTTTCTATTGAGCGAAAACAAGAAACTATTTTCTTCCGATCGTCATCCATGTGTCGAAACTCCCGAGATGAACCATGTAGTGCCCAGGGAAGATCGGAAGGAAGTCACTGTCACTCCAAGAAAATCTAAAGTTCCAAGTAAAACTATCATTTCCAATTCTTTGCCTCGTTTCATGACTTCTACAATGGCGAGTCGCCAAAGGCAAAGTGCTGCAGAAAACAAAGTAGTAGTGATGGGGAAAGCGAAAAGTTTGAGATTTGGAGCAAGAAGCTCTGTCCAATTCTCGAGCTCCCAATCCATCAGTTACTCAGATTTTCGTATAAGAGCAAGCCTACAATTATCAAATAAGAAATCACGGTATGTAGAACCCGACACTCTCTCAACCGAAGCTCCTCAAGTCAATGGCTCAGAACTGAAAAAAGATCCATTGCCATTGCCATTGCCACAAAGCAAATTGGTAACTTCATCTGATTCGAACTTGAGAGTTACGCTTTCTCGTCACCGGAGAAGGATGTCTGATCTAATCTAA

mRNA sequence

ATGAAGGAAGCTCAAGAGGAATGCCAAAAAGTCAAGAACCAAATACAGAAGGCCGAGTTTCTATTGAGCGAAAACAAGAAACTATTTTCTTCCGATCGTCATCCATGTGTCGAAACTCCCGAGATGAACCATGTAGTGCCCAGGGAAGATCGGAAGGAAGTCACTGTCACTCCAAGAAAATCTAAAGTTCCAAGTAAAACTATCATTTCCAATTCTTTGCCTCGTTTCATGACTTCTACAATGGCGAGTCGCCAAAGGCAAAGTGCTGCAGAAAACAAAGTAGTAGTGATGGGGAAAGCGAAAAGTTTGAGATTTGGAGCAAGAAGCTCTGTCCAATTCTCGAGCTCCCAATCCATCAGTTACTCAGATTTTCGTATAAGAGCAAGCCTACAATTATCAAATAAGAAATCACGGTATGTAGAACCCGACACTCTCTCAACCGAAGCTCCTCAAGTCAATGGCTCAGAACTGAAAAAAGATCCATTGCCATTGCCATTGCCACAAAGCAAATTGGTAACTTCATCTGATTCGAACTTGAGAGTTACGCTTTCTCGTCACCGGAGAAGGATGTCTGATCTAATCTAA

Coding sequence (CDS)

ATGAAGGAAGCTCAAGAGGAATGCCAAAAAGTCAAGAACCAAATACAGAAGGCCGAGTTTCTATTGAGCGAAAACAAGAAACTATTTTCTTCCGATCGTCATCCATGTGTCGAAACTCCCGAGATGAACCATGTAGTGCCCAGGGAAGATCGGAAGGAAGTCACTGTCACTCCAAGAAAATCTAAAGTTCCAAGTAAAACTATCATTTCCAATTCTTTGCCTCGTTTCATGACTTCTACAATGGCGAGTCGCCAAAGGCAAAGTGCTGCAGAAAACAAAGTAGTAGTGATGGGGAAAGCGAAAAGTTTGAGATTTGGAGCAAGAAGCTCTGTCCAATTCTCGAGCTCCCAATCCATCAGTTACTCAGATTTTCGTATAAGAGCAAGCCTACAATTATCAAATAAGAAATCACGGTATGTAGAACCCGACACTCTCTCAACCGAAGCTCCTCAAGTCAATGGCTCAGAACTGAAAAAAGATCCATTGCCATTGCCATTGCCACAAAGCAAATTGGTAACTTCATCTGATTCGAACTTGAGAGTTACGCTTTCTCGTCACCGGAGAAGGATGTCTGATCTAATCTAA

Protein sequence

MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI

Homology

[Close]

BLAST of Lsi06G001940 vs. TrEMBL
Match: A0A0A0LZ68_CUCSA (Kinesin-like protein OS=Cucumis sativus GN=Csa_1G573710 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 3.2e-84
Identity = 178/198 (89.90%), Postives = 183/198 (92.42%), Query Frame = 1


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           MKEAQEECQKVKNQIQKAEFLL ENKKLFSSD HP VETPE NH+VP EDRKEVT TPRK
Sbjct: 435 MKEAQEECQKVKNQIQKAEFLLCENKKLFSSDHHPRVETPEANHIVPVEDRKEVTRTPRK 494

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
           SKVPSK IISNSLPRFMTSTMASRQRQ+AAENK +VMG+ KSLRFGARSSVQFSSSQSIS
Sbjct: 495 SKVPSKAIISNSLPRFMTSTMASRQRQTAAENK-IVMGRVKSLRFGARSSVQFSSSQSIS 554

Query: 121 YSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDP----LPLPLPQSKLVTSSD 180
           YSDFRIRASLQLSNKKSRYVEPDTLSTE PQVNGSE KKDP    LPLPLPQSK+VTSSD
Sbjct: 555 YSDFRIRASLQLSNKKSRYVEPDTLSTETPQVNGSEPKKDPLPLSLPLPLPQSKMVTSSD 614

Query: 181 SNLRVTLSRHRRRMSDLI 195
           SNLRVTLSRHRRRMSDLI
Sbjct: 615 SNLRVTLSRHRRRMSDLI 631

[Close]

BLAST of Lsi06G001940 vs. TrEMBL
Match: U7E2V5_POPTR (Kinesin-like protein OS=Populus trichocarpa GN=POPTR_0030s00220g PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 4.4e-41
Identity = 109/194 (56.19%), Postives = 139/194 (71.65%), Query Frame = 1


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           M+EA+EECQKV+ Q+QKAEFLLSEN++L S+  H   +  E   + P+ED +EV  T R 
Sbjct: 451 MREAEEECQKVRYQVQKAEFLLSENRELLSTTYH-VPDDKENAPISPKEDYREVNSTSRV 510

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
           +    +  +++  PRFMTST+ASRQRQSAAE   +V+G+A+SLR   RSS+QFS+SQS S
Sbjct: 511 TDKGIRRNMTSPFPRFMTSTVASRQRQSAAEK--LVVGRARSLRSATRSSLQFSASQSFS 570

Query: 121 YSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLR 180
           YS+FR RA L+ SN+KSRY E   L  E+P+ NG E+K       LP+SK V SSD NLR
Sbjct: 571 YSEFRFRAILKESNRKSRYGETKPLLPESPKCNGPEMKM----ASLPRSKTVISSDPNLR 630

Query: 181 VTLSRHRRRMSDLI 195
            TLSRHRRRMSDLI
Sbjct: 631 TTLSRHRRRMSDLI 637

[Close]

BLAST of Lsi06G001940 vs. TrEMBL
Match: M5WRS4_PRUPE (Kinesin-like protein OS=Prunus persica GN=PRUPE_ppa002746mg PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.8e-40
Identity = 114/196 (58.16%), Postives = 137/196 (69.90%), Query Frame = 1


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           M+EA+EEC K+KNQIQK + LL EN+KLFS+   P  +  E   + P E  KE    PRK
Sbjct: 454 MREAEEECHKLKNQIQKVDLLLCENRKLFSTTYGPLED--EKAPISPEEYLKEAVEMPRK 513

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
            +  SK  +SNSLPRFMTST ASRQR+SAAE +VV  GKA+SLR   RSS+QF++SQS+S
Sbjct: 514 LEKTSKGNVSNSLPRFMTSTAASRQRRSAAEREVV--GKARSLRSVTRSSIQFTASQSMS 573

Query: 121 YSDFRIRASLQLSNKKSRYV--EPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSN 180
           YSD +I+A LQ SN+KSRY     DTL  E+P+ N SE  K        +SKLVTSSD N
Sbjct: 574 YSDPQIKAILQNSNRKSRYAPEAADTLPAESPKCNVSESSK-------TRSKLVTSSDPN 633

Query: 181 LRVTLSRHRRRMSDLI 195
           LRVTL RHRR MSDLI
Sbjct: 634 LRVTLGRHRRWMSDLI 638

[Close]

BLAST of Lsi06G001940 vs. TrEMBL
Match: A0A061F9N3_THECC (Kinesin-like protein OS=Theobroma cacao GN=TCM_026435 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.4e-39
Identity = 108/194 (55.67%), Postives = 139/194 (71.65%), Query Frame = 1


Query: 2   KEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKE-VTVTPRK 61
           +EA+EECQK+  QI+KAEFLLSENKKL+S+      E  E +   P+ED K+ V  TP+ 
Sbjct: 455 REAEEECQKITCQIKKAEFLLSENKKLYSTSYEIPDENEEKSTESPKEDVKDHVIETPKI 514

Query: 62  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 121
           ++   K      LPRFMTST+ASR+RQSAAE ++V   +A+SLR  ARSSVQFS SQS+S
Sbjct: 515 TQKAMKQSTHRPLPRFMTSTVASRERQSAAEREIVK--RARSLRSEARSSVQFSGSQSLS 574

Query: 122 YSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLR 181
           +SD R RA L+ S K SR+ + +  +TE+P+ NGS LK     + LP+SK+VTSSD NLR
Sbjct: 575 FSDPRFRAFLRHSRKNSRFKDTNAPATESPRCNGSALK----TISLPRSKMVTSSDPNLR 634

Query: 182 VTLSRHRRRMSDLI 195
           VTLSRHRRRMSD +
Sbjct: 635 VTLSRHRRRMSDFV 642

[Close]

BLAST of Lsi06G001940 vs. TrEMBL
Match: A0A059D3Z4_EUCGR (Kinesin-like protein OS=Eucalyptus grandis GN=EUGRSUZ_B01741 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.0e-38
Identity = 111/196 (56.63%), Postives = 132/196 (67.35%), Query Frame = 1


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPC--VETPEMNHVVPREDRKEVTVTP 60
           MKEA+EE Q V +Q+ KAEFLLSENKKLFSS   P   VE P        +D KEV  TP
Sbjct: 262 MKEAEEESQIVTDQLLKAEFLLSENKKLFSSTYDPVEDVEKP-----TSPKDLKEVLGTP 321

Query: 61  RKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQS 120
             S    K +  NSLPRFMTST ASRQRQSA+E  +V  G+ KS R   R S+QFS SQS
Sbjct: 322 PASAKVVKQMRCNSLPRFMTSTAASRQRQSASERDIV--GRTKSWRSVTRGSIQFSGSQS 381

Query: 121 ISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSN 180
            SYSD  ++A+L+ SN+KSRY EP  L TE+P+  G + K    P  LP+SK+VTSSD N
Sbjct: 382 FSYSDPHLKATLEKSNRKSRYAEPKALPTESPKCAGLDSK----PASLPRSKMVTSSDPN 441

Query: 181 LRVTLSRHRRRMSDLI 195
           +R TL RHRRRMS+LI
Sbjct: 442 VRATLCRHRRRMSNLI 446

[Close]

BLAST of Lsi06G001940 vs. TAIR10
Match: AT5G27950.1 (AT5G27950.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 100.9 bits (250), Expect = 9.1e-22
Identity = 78/198 (39.39%), Postives = 116/198 (58.59%), Query Frame = 1


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           M+E QE C+K+K ++Q+ E L++E+KKLF       +E  E   + P +  K+   TP  
Sbjct: 429 MEETQEGCKKIKARLQEVECLVNEHKKLFWITNDKYLEDIEKKAISPLDHLKDTDATPIS 488

Query: 61  S-KVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSI 120
           S K+      S  +PRFMTST+ASRQRQ+ +E +  +  KA+S+R  A++  QFS+SQS+
Sbjct: 489 SDKLVKIRKSSGFVPRFMTSTVASRQRQTMSEKE--INAKAQSIRSVAKNLTQFSTSQSL 548

Query: 121 SYSDFRIRASLQLSNKKSRYVEPDT-LSTEAPQ---VNGSELKKDPLPLPLPQSKLVTSS 180
           S SD R +A L+ S  K      ++    E P+    + S  +K+      P+SK+VTSS
Sbjct: 549 SLSDSRSKALLRRSYTKPLQAAANSGTPPETPKRHIKDNSLQRKNMNDTSSPRSKMVTSS 608

Query: 181 DSNLRVTLSRHRRRMSDL 194
           D N+R  L  H+RRMS L
Sbjct: 609 DPNVRAKLCHHKRRMSSL 624

[Close]

BLAST of Lsi06G001940 vs. NCBI nr
Match: gi|778662678|ref|XP_004135657.2| (PREDICTED: kinesin-like protein KIFC3 [Cucumis sativus])

HSP 1 Score: 319.3 bits (817), Expect = 4.6e-84
Identity = 178/198 (89.90%), Postives = 183/198 (92.42%), Query Frame = 1


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           MKEAQEECQKVKNQIQKAEFLL ENKKLFSSD HP VETPE NH+VP EDRKEVT TPRK
Sbjct: 435 MKEAQEECQKVKNQIQKAEFLLCENKKLFSSDHHPRVETPEANHIVPVEDRKEVTRTPRK 494

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
           SKVPSK IISNSLPRFMTSTMASRQRQ+AAENK +VMG+ KSLRFGARSSVQFSSSQSIS
Sbjct: 495 SKVPSKAIISNSLPRFMTSTMASRQRQTAAENK-IVMGRVKSLRFGARSSVQFSSSQSIS 554

Query: 121 YSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDP----LPLPLPQSKLVTSSD 180
           YSDFRIRASLQLSNKKSRYVEPDTLSTE PQVNGSE KKDP    LPLPLPQSK+VTSSD
Sbjct: 555 YSDFRIRASLQLSNKKSRYVEPDTLSTETPQVNGSEPKKDPLPLSLPLPLPQSKMVTSSD 614

Query: 181 SNLRVTLSRHRRRMSDLI 195
           SNLRVTLSRHRRRMSDLI
Sbjct: 615 SNLRVTLSRHRRRMSDLI 631

[Close]

BLAST of Lsi06G001940 vs. NCBI nr
Match: gi|659099733|ref|XP_008450750.1| (PREDICTED: kinesin-like protein KIFC3 [Cucumis melo])

HSP 1 Score: 315.5 bits (807), Expect = 6.6e-83
Identity = 176/196 (89.80%), Postives = 180/196 (91.84%), Query Frame = 1


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           MKEAQEECQKVKNQIQKAEFLL ENKKL SSD HP V TPE NH+VP EDRKEVT TPRK
Sbjct: 435 MKEAQEECQKVKNQIQKAEFLLCENKKLLSSDHHPHVNTPEANHIVPVEDRKEVTSTPRK 494

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
           SKVPSKTI+SNSLPRFMTSTMASRQRQSAAENK+V  G+ KSLRFGARSSVQFSSSQSIS
Sbjct: 495 SKVPSKTIVSNSLPRFMTSTMASRQRQSAAENKIVT-GRVKSLRFGARSSVQFSSSQSIS 554

Query: 121 YSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLP--LPLPQSKLVTSSDSN 180
           YSDFRIRASLQLSNKKSRYVEPDTLSTE PQVNGSE KKDPLP  LPLPQSKLVTSSDSN
Sbjct: 555 YSDFRIRASLQLSNKKSRYVEPDTLSTEPPQVNGSEPKKDPLPLSLPLPQSKLVTSSDSN 614

Query: 181 LRVTLSRHRRRMSDLI 195
           LRV LSRHRRRMSDLI
Sbjct: 615 LRVMLSRHRRRMSDLI 629

[Close]

BLAST of Lsi06G001940 vs. NCBI nr
Match: gi|645222453|ref|XP_008218171.1| (PREDICTED: kinesin-like protein KIFC3 [Prunus mume])

HSP 1 Score: 181.8 bits (460), Expect = 1.1e-42
Identity = 117/196 (59.69%), Postives = 141/196 (71.94%), Query Frame = 1


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           M+EA+EEC K+KNQIQK + LL EN+KLFS+   P  +  E   + P+E  KE    PRK
Sbjct: 454 MREAEEECHKLKNQIQKVDLLLRENRKLFSTTYGPLED--EKAPISPKEYLKEAVEMPRK 513

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
            +  SK  +SNSLPRFMTST ASRQRQSAAE +VV  GKA+SLR  ARSS+QF++SQS+S
Sbjct: 514 PEKASKGNVSNSLPRFMTSTAASRQRQSAAEREVV--GKARSLRSVARSSIQFTASQSMS 573

Query: 121 YSDFRIRASLQLSNKKSRYVE--PDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSN 180
           YSD +I+A LQ SN+KSRY +   DTL  E+P+ N SE  K        +SKLVTSSD N
Sbjct: 574 YSDPQIKAILQNSNRKSRYAQEAADTLPAESPKCNVSESSK-------TRSKLVTSSDPN 633

Query: 181 LRVTLSRHRRRMSDLI 195
           LRVTL RHRRRMSDLI
Sbjct: 634 LRVTLGRHRRRMSDLI 638

[Close]

BLAST of Lsi06G001940 vs. NCBI nr
Match: gi|566259488|ref|XP_006389302.1| (kinesin motor family protein [Populus trichocarpa])

HSP 1 Score: 176.0 bits (445), Expect = 6.3e-41
Identity = 109/194 (56.19%), Postives = 139/194 (71.65%), Query Frame = 1


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           M+EA+EECQKV+ Q+QKAEFLLSEN++L S+  H   +  E   + P+ED +EV  T R 
Sbjct: 451 MREAEEECQKVRYQVQKAEFLLSENRELLSTTYH-VPDDKENAPISPKEDYREVNSTSRV 510

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
           +    +  +++  PRFMTST+ASRQRQSAAE   +V+G+A+SLR   RSS+QFS+SQS S
Sbjct: 511 TDKGIRRNMTSPFPRFMTSTVASRQRQSAAEK--LVVGRARSLRSATRSSLQFSASQSFS 570

Query: 121 YSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLR 180
           YS+FR RA L+ SN+KSRY E   L  E+P+ NG E+K       LP+SK V SSD NLR
Sbjct: 571 YSEFRFRAILKESNRKSRYGETKPLLPESPKCNGPEMKM----ASLPRSKTVISSDPNLR 630

Query: 181 VTLSRHRRRMSDLI 195
            TLSRHRRRMSDLI
Sbjct: 631 TTLSRHRRRMSDLI 637

[Close]

BLAST of Lsi06G001940 vs. NCBI nr
Match: gi|595841981|ref|XP_007208321.1| (hypothetical protein PRUPE_ppa002746mg [Prunus persica])

HSP 1 Score: 173.3 bits (438), Expect = 4.1e-40
Identity = 114/196 (58.16%), Postives = 137/196 (69.90%), Query Frame = 1


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           M+EA+EEC K+KNQIQK + LL EN+KLFS+   P  +  E   + P E  KE    PRK
Sbjct: 454 MREAEEECHKLKNQIQKVDLLLCENRKLFSTTYGPLED--EKAPISPEEYLKEAVEMPRK 513

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
            +  SK  +SNSLPRFMTST ASRQR+SAAE +VV  GKA+SLR   RSS+QF++SQS+S
Sbjct: 514 LEKTSKGNVSNSLPRFMTSTAASRQRRSAAEREVV--GKARSLRSVTRSSIQFTASQSMS 573

Query: 121 YSDFRIRASLQLSNKKSRYV--EPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSN 180
           YSD +I+A LQ SN+KSRY     DTL  E+P+ N SE  K        +SKLVTSSD N
Sbjct: 574 YSDPQIKAILQNSNRKSRYAPEAADTLPAESPKCNVSESSK-------TRSKLVTSSDPN 633

Query: 181 LRVTLSRHRRRMSDLI 195
           LRVTL RHRR MSDLI
Sbjct: 634 LRVTLGRHRRWMSDLI 638

The following BLAST results are available for this feature:

BLAST of Lsi06G001940 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi06G001940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZ68_CUCSA	3.2e-84	89.90	Kinesin-like protein OS=Cucumis sativus GN=Csa_1G573710 PE=3 SV=1	[more]
U7E2V5_POPTR	4.4e-41	56.19	Kinesin-like protein OS=Populus trichocarpa GN=POPTR_0030s00220g PE=3 SV=1	[more]
M5WRS4_PRUPE	2.8e-40	58.16	Kinesin-like protein OS=Prunus persica GN=PRUPE_ppa002746mg PE=3 SV=1	[more]
A0A061F9N3_THECC	2.4e-39	55.67	Kinesin-like protein OS=Theobroma cacao GN=TCM_026435 PE=3 SV=1	[more]
A0A059D3Z4_EUCGR	2.0e-38	56.63	Kinesin-like protein OS=Eucalyptus grandis GN=EUGRSUZ_B01741 PE=3 SV=1	[more]

BLAST of Lsi06G001940 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G27950.1	9.1e-22	39.39	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]

BLAST of Lsi06G001940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778662678\|ref\|XP_004135657.2\|	4.6e-84	89.90	PREDICTED: kinesin-like protein KIFC3 [Cucumis sativus]	[more]
gi\|659099733\|ref\|XP_008450750.1\|	6.6e-83	89.80	PREDICTED: kinesin-like protein KIFC3 [Cucumis melo]	[more]
gi\|645222453\|ref\|XP_008218171.1\|	1.1e-42	59.69	PREDICTED: kinesin-like protein KIFC3 [Prunus mume]	[more]
gi\|566259488\|ref\|XP_006389302.1\|	6.3e-41	56.19	kinesin motor family protein [Populus trichocarpa]	[more]
gi\|595841981\|ref\|XP_007208321.1\|	4.1e-40	58.16	hypothetical protein PRUPE_ppa002746mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0007018	microtubule-based movement
biological_process	GO:0050789	regulation of biological process
cellular_component	GO:0005871	kinesin complex
cellular_component	GO:0005874	microtubule
cellular_component	GO:0045298	tubulin complex
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003777	microtubule motor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G001940.1	Lsi06G001940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 1..21 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G001940	Csa1G573710	Cucumber (Chinese Long) v2	culsiB058
Lsi06G001940	CSPI01G27300	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G001940	Cucsa.289070	Cucumber (Gy14) v1	cgylsiB471
Lsi06G001940	CmoCh10G011010	Cucurbita moschata (Rifu)	cmolsiB057
Lsi06G001940	Cla011288	Watermelon (97103) v1	lsiwmB396
Lsi06G001940	MELO3C015383	Melon (DHL92) v3.5.1	lsimeB396
Lsi06G001940	ClCG03G016350	Watermelon (Charleston Gray)	lsiwcgB364
Lsi06G001940	MELO3C015383.2	Melon (DHL92) v3.6.1	lsimedB418
Lsi06G001940	Cla97C03G066670	Watermelon (97103) v2	lsiwmbB365
Lsi06G001940	Bhi02G001662	Wax gourd	lsiwgoB517
Lsi06G001940	CsaV3_1G039610	Cucumber (Chinese Long) v3	cuclsiB068

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G001940	Silver-seed gourd	carlsiB831
Lsi06G001940	Cucurbita maxima (Rimu)	cmalsiB139
Lsi06G001940	Cucurbita moschata (Rifu)	cmolsiB125
Lsi06G001940	Cucurbita pepo (Zucchini)	cpelsiB561
Lsi06G001940	Cucumber (Gy14) v2	cgyblsiB055