Lsi06G001620 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCTTTGCCACTACCTTCGCTTTCACTTTCGGATCATTAGCTTCTTCACGAAGTAGATCGAAGACTTGCAGACACTCCGATTCAGAGTCAATGGAAAACCATAATTTAAATGCTTCTTTCCTTCGCCATTTCTCTTCACTCGTCTACTCACTTCTTCTCCACCACAAAGTTTATCGTGAAAGAGATGGCCAATTGCCTCCTCCTTCCTCCTCAGGATCCATGGCCGGTTGGATTCCGGTTCCATCCAACAGATGAGGAGCTGTTTAATCACTATCTGAAGAACAAGATTGTTGGTCAGGAATCCCTCGTTCAATACATCCCTCAAGTTGATATCTGCAACTATGAGCCATGGCAACTCCCTAGTATGTTTCTCCCTCTTTCTCAACCACATTTCTTCGTTTCATGCCTTTGCATTTCTACAAGCTTTCTGATTCTCTGACCTTCTCTTCGTAGGGCTATCGAAGGATCAAACAGGGGATCAGCAGTGGTTTTTCTTTTCTGCTCAAGACTTCAAGTATTCCAATGGCCGTCGATCCAATAGGGCCACAAGAACCGGTTACTGGAAATCCACTGGCAAGGACCGCAAAATCATGGCTCGAGGAACCACAAACTTGATTGGTACCAAGAAAACTCTAGTCTTCTACAGCGGCCGGGTTCCAAATGGGAGCAGGACCCATTGGGTTATACATGAGTATCATCTTCACCCAGACCCCAACTTCGCTCACCTGGTGATTGCCCTCATTCTTTTGTGCCCTAAACGTTTTTTCTTTCATGTCTTTGTACTCTAATTTCGTTTATTTTTGGAATTTGCATATGCTCTTTCATGACGTCTCTCATATAGTTTTGATCAAGGTTAAAATAAGATTTCAATCTTATGAATATATCGATGGATAAATCGATATCGATATCAACATGTATTTCTGTAAGTCATGAAACTTATAAAATTTATTTAGATTAATAATTAAGGTGTTTTTACTCTCAAATTAAGTTATGGGTATTGTTATGAGTATTCTTACTTATATTGGACTACATAGATATATTTTTTATGTTTTACGTGCATTTATAAAAGATGTTGGAGATATCTATGGATATTTAACGTGCATGTCAAACTCTTCTATTTACGGATATATCAACATGTCGACGGATATTTTATCCTTCGTTTTGATTAGTGTACTTGTATCTTCATATTTACTAAAGTTTGATTTGATTTATTCATTAAAAATTTTGGAAAAATATGCAGCATCTGTCCTGAATTTTACAGTTTGCACTATATCTTGGTCTAACACTCCTTGCGTTGTCTTCTTGTTCATGCAGAGATCGTTTGTTATTTGTCGCCTAAAGAAAAAGGGGAACGAGAATGATGTTTTGATGTGTGAAGAAGCTGAACCAAATGGTCGTTTGACTTCGACCAATGTAGCCACTGGGAACCAAAATCAAGAGGTTAGAATTTAGAAACATTAATCCCTGGACGTTGCCTAGTCAGTGCAGTATGATTTGTTTTAACAACCTTAACATTTATATGTTCAGATTCCAGGAAATGGACCATCATTGTTTCCAGATCTCCAGGTTTCGGATTACGATGTTTCCGAATTGCTGTCCCCTTTGTTTTCTAACCCTGAACCCACTTCATTGGATTTCCAAGTTATCAATAGCTATGGGTCTCATGCAAATGGACCTACTGATGAGGATGTTAACTCAGTTCTTGTTGATGATGAAAATTATTTCCATGAAGGGATGTCAGATAGTTCGATCAGTGATTACACTTTCAACTGGGAGGAGTTGTTTAACTCGGTTAATGAAGATCGGGGTGGTGGATTCAGCAGTGACACTGCCATGGATACAGCTTTAAGCTGGCAGGTAAAAGGATATGATAAATTATACAGAAATATCTTGCGGAAATCATTGACTGAGGAGATTGATGTGAGTTTGTTTAGGCACATATTCTTCACTGCAATTTCATTTCTTGCTTACGTTTATGTTGTGTTAGAAACTAAGAAGCACAAATATAGATACGAGATACCGATACAACACGGCACGGATACAACGACACGTCATTTTTTAAAAAAATATAGGACACGAACACGACACTGACACGTTTATTAAAATATACATTTTAAAAAACATATATCATTTTTATATTAGAACATTCAAAGTGAAGGAGTTGATGCATTTATATGCTTAAAAAATAAGCTTGATGTATTTCAATTTTCACACTCAAAGTTTATTAATATTGTCATATATGTGTCTTTTTAGTTTACTCAACAATGTTCAATACATGTTTAACACATTTGTTGCACTAACAAGTGTTCGATACATGTCCAATAAGTGTTAGAGTGTCCAAGTGTCGGACACTGACACTCTAGTAAAACTAATGTGTCCATATGTTTCATTGTGTTGCAGTATGATCATGCTTCTCCCAGCCTTTTTGGTGAAAGTATGCCGATGATTAAAGAATCTCGTAGAAGCCCACTTACTTCAAAGATCCTGAAGTACGAAGGGACAAAAGATAGACTTCAAACCAAATGCTTATTGTATCAGAATGATGACTCTGACAGGGAAACAAGAAATTTCAGCTCTCAACATCAACCTAAATCCCATAAGGTTGTAGACCATGTAGATGCTTCACAAAATGTCCAGCCAAAGAAGGAAACTCAACTCCAAGTAGTGTCATCTCTTAGCAAGGTGAGAAAACAGAACAAAACACTCACATAGGAAAAATTCATATATGTTTTTATCATGAAAGCAACTTGAATGACTTTAATTTGCCATGTTTGACATCAAACCTCGTTCGATTTTCAGGCTAAATCAGTTCCAAAACGAATTAAAGTTGTCAGACCAGCTGCAGCTTCAAAGAAAGACACTGTTGAAGACCAACAAAGTGAAGTTGAGAATGGTGTAGCCTACAGGTTAAAGTCAACTGGCCATGGGTCTCTTGAGAGTGGAGGAAAGTGTTTCTCAAGTTTCTTGACTACAAAATGCATTCACCACAAATCAAGTCCAGCCTCCTATTTTGCCAGAGCATGTGTAGGCTTCATTTTGTTCTTCACAGTTGCAAGACAAGTGCTGCTGTATGGAAATTGATGATAAAAATTTTAGGTTAAAATAACATTTTGATCCCTATGCTTAATTTTAACTTTGTTCAATTTTAGTCCCAGTACTATCAATAAATCTTAAATTTAGTCCCCAATATTAAGTTGTTGATTTTTTAAAAAACTTTTTGTTATTTATATCCTTTTTGTTATAAATTTTAAAAACATATATACATATTTTATTTTCTTGCAAGAAAATTATTATTATTGTTTAATCAATTTCGATAAAAATTAACTTTGAAGGACTAAATTTAAGATTTATTGAAAATTCTGGGACTAGAATTGGACAATCGAAAGTATAGGGACTAAAATTGGATAAACTTTATAGTATAGGGTAATTATATTAAGTTACCATATTTCCTTGTACAAAGATGGTGTTCAAATAATGGTTGAGGCTGATTGAAAATGTTAGAGATAGCTCCCTCTGTGTATTTCTGTATTTGGGGTGGATTGCTTCTGATTGCAATCTTTAACTTTAAAAACGTTTGATTTAGGATTGACGTGCGTGTAAAGGTTATATCGACGAACACATCTACTATGTGTAAGAGTGCAATCATAGGTCTATTAACCTAAAGTTGATGAATCAAAATTAATTGATTAAATAGTGTAATTAATTAATTTTATATATTGTGCCCATTTTTATTCTAAACATTAGTGTATCATCTTTCGACAATATCTATAAATCTTATGAGTCGTAAAGTGGATCAACTTAAAAGAAGTCTTTCTTTTTCCAATTATTTTTTTAGTGAGGACTTTTTGCACGATTGCAATGTCAAAATTGTATTTTAGGCAATCAATGTTTAG GCTTTGCCACTACCTTCGCTTTCACTTTCGGATCATTAGCTTCTTCACGAAGTAGATCGAAGACTTGCAGACACTCCGATTCAGAGTCAATGGAAAACCATAATTTAAATGCTTCTTTCCTTCGCCATTTCTCTTCACTCGTCTACTCACTTCTTCTCCACCACAAAGTTTATCGTGAAAGAGATGGCCAATTGCCTCCTCCTTCCTCCTCAGGATCCATGGCCGGTTGGATTCCGGTTCCATCCAACAGATGAGGAGCTGTTTAATCACTATCTGAAGAACAAGATTGTTGGTCAGGAATCCCTCGTTCAATACATCCCTCAAGTTGATATCTGCAACTATGAGCCATGGCAACTCCCTAGGCTATCGAAGGATCAAACAGGGGATCAGCAGTGGTTTTTCTTTTCTGCTCAAGACTTCAAGTATTCCAATGGCCGTCGATCCAATAGGGCCACAAGAACCGGTTACTGGAAATCCACTGGCAAGGACCGCAAAATCATGGCTCGAGGAACCACAAACTTGATTGGTACCAAGAAAACTCTAGTCTTCTACAGCGGCCGGGTTCCAAATGGGAGCAGGACCCATTGGGTTATACATGAGTATCATCTTCACCCAGACCCCAACTTCGCTCACCTGAGATCGTTTGTTATTTGTCGCCTAAAGAAAAAGGGGAACGAGAATGATGTTTTGATGTGTGAAGAAGCTGAACCAAATGGTCGTTTGACTTCGACCAATGTAGCCACTGGGAACCAAAATCAAGAGATTCCAGGAAATGGACCATCATTGTTTCCAGATCTCCAGGTTTCGGATTACGATGTTTCCGAATTGCTGTCCCCTTTGTTTTCTAACCCTGAACCCACTTCATTGGATTTCCAAGTTATCAATAGCTATGGGTCTCATGCAAATGGACCTACTGATGAGGATGTTAACTCAGTTCTTGTTGATGATGAAAATTATTTCCATGAAGGGATGTCAGATAGTTCGATCAGTGATTACACTTTCAACTGGGAGGAGTTGTTTAACTCGGTTAATGAAGATCGGGGTGGTGGATTCAGCAGTGACACTGCCATGGATACAGCTTTAAGCTGGCAGAATGATGACTCTGACAGGGAAACAAGAAATTTCAGCTCTCAACATCAACCTAAATCCCATAAGGTTGTAGACCATGTAGATGCTTCACAAAATGTCCAGCCAAAGAAGGAAACTCAACTCCAAGTAGTGTCATCTCTTAGCAAGGCTAAATCAGTTCCAAAACGAATTAAAGTTGTCAGACCAGCTGCAGCTTCAAAGAAAGACACTGTTGAAGACCAACAAAGTGAAGTTGAGAATGGTGTAGCCTACAGGTTAAAGTCAACTGGCCATGGGTCTCTTGAGAGTGGAGGAAAGTGTTTCTCAAGTTTCTTGACTACAAAATGCATTCACCACAAATCAAGTCCAGCCTCCTATTTTGCCAGAGCATGTGCAATCAATGTTTAG ATGCTTCTTTCCTTCGCCATTTCTCTTCACTCGTCTACTCACTTCTTCTCCACCACAAAGTTTATCGTGAAAGAGATGGCCAATTGCCTCCTCCTTCCTCCTCAGGATCCATGGCCGGTTGGATTCCGGTTCCATCCAACAGATGAGGAGCTGTTTAATCACTATCTGAAGAACAAGATTGTTGGTCAGGAATCCCTCGTTCAATACATCCCTCAAGTTGATATCTGCAACTATGAGCCATGGCAACTCCCTAGGCTATCGAAGGATCAAACAGGGGATCAGCAGTGGTTTTTCTTTTCTGCTCAAGACTTCAAGTATTCCAATGGCCGTCGATCCAATAGGGCCACAAGAACCGGTTACTGGAAATCCACTGGCAAGGACCGCAAAATCATGGCTCGAGGAACCACAAACTTGATTGGTACCAAGAAAACTCTAGTCTTCTACAGCGGCCGGGTTCCAAATGGGAGCAGGACCCATTGGGTTATACATGAGTATCATCTTCACCCAGACCCCAACTTCGCTCACCTGAGATCGTTTGTTATTTGTCGCCTAAAGAAAAAGGGGAACGAGAATGATGTTTTGATGTGTGAAGAAGCTGAACCAAATGGTCGTTTGACTTCGACCAATGTAGCCACTGGGAACCAAAATCAAGAGATTCCAGGAAATGGACCATCATTGTTTCCAGATCTCCAGGTTTCGGATTACGATGTTTCCGAATTGCTGTCCCCTTTGTTTTCTAACCCTGAACCCACTTCATTGGATTTCCAAGTTATCAATAGCTATGGGTCTCATGCAAATGGACCTACTGATGAGGATGTTAACTCAGTTCTTGTTGATGATGAAAATTATTTCCATGAAGGGATGTCAGATAGTTCGATCAGTGATTACACTTTCAACTGGGAGGAGTTGTTTAACTCGGTTAATGAAGATCGGGGTGGTGGATTCAGCAGTGACACTGCCATGGATACAGCTTTAAGCTGGCAGAATGATGACTCTGACAGGGAAACAAGAAATTTCAGCTCTCAACATCAACCTAAATCCCATAAGGTTGTAGACCATGTAGATGCTTCACAAAATGTCCAGCCAAAGAAGGAAACTCAACTCCAAGTAGTGTCATCTCTTAGCAAGGCTAAATCAGTTCCAAAACGAATTAAAGTTGTCAGACCAGCTGCAGCTTCAAAGAAAGACACTGTTGAAGACCAACAAAGTGAAGTTGAGAATGGTGTAGCCTACAGGTTAAAGTCAACTGGCCATGGGTCTCTTGAGAGTGGAGGAAAGTGTTTCTCAAGTTTCTTGACTACAAAATGCATTCACCACAAATCAAGTCCAGCCTCCTATTTTGCCAGAGCATGTGCAATCAATGTTTAG MLLSFAISLHSSTHFFSTTKFIVKEMANCLLLPPQDPWPVGFRFHPTDEELFNHYLKNKIVGQESLVQYIPQVDICNYEPWQLPRLSKDQTGDQQWFFFSAQDFKYSNGRRSNRATRTGYWKSTGKDRKIMARGTTNLIGTKKTLVFYSGRVPNGSRTHWVIHEYHLHPDPNFAHLRSFVICRLKKKGNENDVLMCEEAEPNGRLTSTNVATGNQNQEIPGNGPSLFPDLQVSDYDVSELLSPLFSNPEPTSLDFQVINSYGSHANGPTDEDVNSVLVDDENYFHEGMSDSSISDYTFNWEELFNSVNEDRGGGFSSDTAMDTALSWQNDDSDRETRNFSSQHQPKSHKVVDHVDASQNVQPKKETQLQVVSSLSKAKSVPKRIKVVRPAAASKKDTVEDQQSEVENGVAYRLKSTGHGSLESGGKCFSSFLTTKCIHHKSSPASYFARACAINV
BLAST of Lsi06G001620 vs. Swiss-Prot
Match: NAC14_ARATH (NAC domain-containing protein 14 OS=Arabidopsis thaliana GN=NAC014 PE=2 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.4e-43 Identity = 90/180 (50.00%), Postives = 116/180 (64.44%), Query Frame = 1
BLAST of Lsi06G001620 vs. Swiss-Prot
Match: NTL9_ARATH (Protein NTM1-like 9 OS=Arabidopsis thaliana GN=NTL9 PE=1 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.6e-42 Identity = 93/189 (49.21%), Postives = 118/189 (62.43%), Query Frame = 1
BLAST of Lsi06G001620 vs. Swiss-Prot
Match: NAC86_ARATH (NAC domain-containing protein 86 OS=Arabidopsis thaliana GN=NAC086 PE=2 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 3.0e-41 Identity = 97/222 (43.69%), Postives = 132/222 (59.46%), Query Frame = 1
BLAST of Lsi06G001620 vs. Swiss-Prot
Match: NAC91_ARATH (NAC domain-containing protein 91 OS=Arabidopsis thaliana GN=NAC091 PE=1 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 8.1e-39 Identity = 93/217 (42.86%), Postives = 130/217 (59.91%), Query Frame = 1
BLAST of Lsi06G001620 vs. Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 5.2e-38 Identity = 85/167 (50.90%), Postives = 104/167 (62.28%), Query Frame = 1
BLAST of Lsi06G001620 vs. TrEMBL
Match: A0A0A0LWI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G572390 PE=4 SV=1) HSP 1 Score: 619.4 bits (1596), Expect = 3.5e-174 Identity = 329/469 (70.15%), Postives = 365/469 (77.83%), Query Frame = 1
BLAST of Lsi06G001620 vs. TrEMBL
Match: A0A151RAR5_CAJCA (NAC domain-containing protein 78 OS=Cajanus cajan GN=KK1_038960 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 7.8e-49 Identity = 109/259 (42.08%), Postives = 152/259 (58.69%), Query Frame = 1
BLAST of Lsi06G001620 vs. TrEMBL
Match: F6I305_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02270 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.5e-47 Identity = 100/191 (52.36%), Postives = 124/191 (64.92%), Query Frame = 1
BLAST of Lsi06G001620 vs. TrEMBL
Match: V7APU1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G121100g PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 2.8e-46 Identity = 111/268 (41.42%), Postives = 155/268 (57.84%), Query Frame = 1
BLAST of Lsi06G001620 vs. TrEMBL
Match: V7ASZ2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G121100g PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 2.8e-46 Identity = 111/268 (41.42%), Postives = 155/268 (57.84%), Query Frame = 1
BLAST of Lsi06G001620 vs. TAIR10
Match: AT1G33060.2 (AT1G33060.2 NAC 014) HSP 1 Score: 177.9 bits (450), Expect = 1.4e-44 Identity = 90/180 (50.00%), Postives = 116/180 (64.44%), Query Frame = 1
BLAST of Lsi06G001620 vs. TAIR10
Match: AT4G35580.2 (AT4G35580.2 NAC transcription factor-like 9) HSP 1 Score: 175.3 bits (443), Expect = 8.9e-44 Identity = 93/189 (49.21%), Postives = 118/189 (62.43%), Query Frame = 1
BLAST of Lsi06G001620 vs. TAIR10
Match: AT5G17260.1 (AT5G17260.1 NAC domain containing protein 86) HSP 1 Score: 171.0 bits (432), Expect = 1.7e-42 Identity = 97/222 (43.69%), Postives = 132/222 (59.46%), Query Frame = 1
BLAST of Lsi06G001620 vs. TAIR10
Match: AT1G65910.1 (AT1G65910.1 NAC domain containing protein 28) HSP 1 Score: 170.2 bits (430), Expect = 2.9e-42 Identity = 94/228 (41.23%), Postives = 128/228 (56.14%), Query Frame = 1
BLAST of Lsi06G001620 vs. TAIR10
Match: AT3G17730.1 (AT3G17730.1 NAC domain containing protein 57) HSP 1 Score: 168.7 bits (426), Expect = 8.3e-42 Identity = 96/237 (40.51%), Postives = 135/237 (56.96%), Query Frame = 1
BLAST of Lsi06G001620 vs. NCBI nr
Match: gi|659099647|ref|XP_008450706.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis melo]) HSP 1 Score: 632.5 bits (1630), Expect = 5.7e-178 Identity = 334/469 (71.22%), Postives = 370/469 (78.89%), Query Frame = 1
BLAST of Lsi06G001620 vs. NCBI nr
Match: gi|778662593|ref|XP_011659914.1| (PREDICTED: NAC transcription factor 25-like [Cucumis sativus]) HSP 1 Score: 619.4 bits (1596), Expect = 5.0e-174 Identity = 329/469 (70.15%), Postives = 365/469 (77.83%), Query Frame = 1
BLAST of Lsi06G001620 vs. NCBI nr
Match: gi|659099643|ref|XP_008450704.1| (PREDICTED: uncharacterized protein LOC103492204 isoform X1 [Cucumis melo]) HSP 1 Score: 443.7 bits (1140), Expect = 3.8e-121 Identity = 223/307 (72.64%), Postives = 249/307 (81.11%), Query Frame = 1
BLAST of Lsi06G001620 vs. NCBI nr
Match: gi|659099645|ref|XP_008450705.1| (PREDICTED: uncharacterized protein LOC103492204 isoform X2 [Cucumis melo]) HSP 1 Score: 443.7 bits (1140), Expect = 3.8e-121 Identity = 223/307 (72.64%), Postives = 249/307 (81.11%), Query Frame = 1
BLAST of Lsi06G001620 vs. NCBI nr
Match: gi|225453680|ref|XP_002268892.1| (PREDICTED: NAC transcription factor NAM-B1-like isoform X3 [Vitis vinifera]) HSP 1 Score: 204.1 bits (518), Expect = 5.1e-49 Identity = 119/265 (44.91%), Postives = 150/265 (56.60%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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