Lsi06G001600 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G001600
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Superoxide dismutase
Location	chr06 : 1710508 .. 1716036 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTCTTGCTGCAATCCTATGAACGTTAGCTCTCCGCTTCTGCTGACCAATTCTTCCCAGCAGTTAAAGAGCACCAAGCATCCTTACTTGGTACATTGCCTTTTCCTTGATATTCTCCGATTGATACTTACTTGGTTCAAATAATTCGCTTCATTCATGTAAACTCTTTCATCGAACAAATATAGAATGCAATAGTTCCTCAGATTGAGGTTACTTTTTCTTTTGACTCTTCTCCCTCACCCTCTTCCTCTCTTCCCCCTTACATCTCTGTGTAGTCTCCTTTCCCAGCCTCTACTGTTTTATTTCCATTTGCATCAATAAAGAAACAATGTATGTGGAGTCTGGTCATGGGCCAAGGACCAATATTCGGACCTAAATCCTATATTTTGTGACCGTCAGGTGATATTTAAGAAGTCAGGATTATTTACAGTACAGGAGGTCCTTTGGGGTACTGAGATTATTTAGTAACTATATTGTTCTTTTTAAAGTCTGACATCAAAATTTTCCAAATGGAAGGAGATGTAGACACGTTTACCTTCTCACCCATATTCATTTATTGAGCAGAATTGTGCATTTGAAAATTTTCAATTTGTACAATATGTTTATCACTATTTAAAGACAAGATTTTGGACTTCTTCTATGGTTATATGTTTGGGCTTCTGACTCTAAGGAAGTAAAATAATTTTCAGAGAAGCTTTTATGTTATCGAGGTAGTTCATCTCTCTTCCTCTCTCTCTTTATTTTTGTTTAGACTTTTGTTACAACAGATTCAATTTAACATTATAAATAAAAAGTATCTGATATATTTTTTTTTTTCTTTTCTTCTTTTTTGATGAAACTCTGCCAAAGAGTTGCTGTAAGTATTAGTTCCTATTTCACAACCATTGTCGCATCTTGGAAATCGTCAATATCAATCTTCATGCAGAAGGCCTTCAGGAGAGAGCATTTTATTTGATACTGACGCATGTTTGTTCTTTGCAGTATCAGAGTAAGTTGCATAAGACAAGCTCTGATGTAACCACAAAAGGAATGAAAGTTTTTGCTTATTATGGCTTGAAGACACCCCCCTATGAACTTGTAAGTCACCAACCTAATAATGTGCTTACTTATTTTGGAACCAAAATTCCATGTTTTAGGGCTTGTTTCTTGCAGATATTTGCTTCTTGCTCATAGAGTTCACTTGATGGTCCCACATATTTAGACATGTCTTTTTTAGGAGCAAGCATAGCAAAGATCTTCAAAGCAAGAGTTGCGAAATTATGCTTTATGTTTCTTTATTTACTTTTAAGAGTCTTGTCTCAAATACCACACCACATCTTGCATAAAATTGAAATTGTGCCGTTCCGTTACAGTATTCCCTTATACTTTTGGTTCTTGAATTTTTTTCTGTAAAGATTATTAAGACTCAGGTTTAATAGCTAGTAAAACATTATTTGAACCCACATAAAGCAGGTTTAATATACTGGCATTAAATGTGATTGGAGTGGCTTTAGTATTTCTTGTCTTCTTTCAAAATTGGCAACTAGACGTGAGAGGTCAACATAGGTGAGTTGACATCAATAAGGCACCTATCCTGGTTCTTTCTTCTTCTTCTTCCTCTCTTTCTCTCACATATGAAATTTTTATAGTTTTTGATATATTGTAAACATAATCTCAATCACTCTTATGTATTTAGATTTATGCGTATTGGGGTCCTTTAAAATCCCCAATTTTTGGGGTGGATTGCTTATCCCGTCTCTTGTAGCTAGCTTTTCTGTGGATATAGTCATTGTCGGATCATAGATTCATAATAAGCCTACAAATTTCTACCAAAGTGATTATAAATTTTCACAATTGCAGCATTACTGGTAAGAAATGGATATATCTATAAACTTTTTAACAGCACTAAGTTTTATTTTCTTCTCTACTTTCAGGATGCTTTAGAACCATATATGAGTCAGAGGACATTGGAGGTTCACTGGGGTAAACATCACCGTAATTACGTTGAAGGTTTGAACAAGCAACTGAGCCAAAATGATATTCTATATGGCCACACTTTGGATGAACTTCTCAAAGTAACATATAACAATGGGAATCCTTTACCTGAGTTTAACAATGCTGCCCAGGTACTTCAATGTTAATTCATACCTTAATTTAAATTATGAGGGCTAAAATTAAACCTTTCTGATATTCTGATTGACTCCTTCATGTAAGCCTTTTATTTGAGTTCAAGCTATTTAGCACATGATACAATTTCTACCGCTAGTATGTAGCATTTCAAAAGCTACTTGATTTCAACTGATTGTTCGCTTTATCATTAATAAGAAAGACATGAGATGATCTTTATTTTGTTTTAATATTGAGACAGAAAGATTTCTATAAAATCTGATTACCAAATGAAGTGTTCAATACTCTCAAAGGAAAAAAAAGAAAAAAAAGAAAAAGAAAAAAAACAATGTTATCCTATTAGTTCTTACATATGGTGACTGGGGTGGCTATGAAATTGAAATTGAATAGTTAATAGCATACTTCTGCTAATAGCAGGTCATATACTATGAGATCCTTAATGCGCCATCTTACATGCAGAGCTATTATTCTTGATACGAAAATTTCCAAAGCTATCTGAGCTTGGCTTTAGTGTATTTATATCACTTAAAAAGGAGATACCATCCCTGCCTAATTTCGCCTGATTGCTAAAATCTCAAGACCATCTTTTTGTCCCCTTTTTCTTTACACTTAACCGTCTCATTTTTTCAAAAATCTTGAGACATCTCAAGGTCAGTGGTGGTCATTGCTGGACATGTTCAACCCTTCTGAGGTGCCCATCTTCCTGTTCAACATTGTCTTGAACAAGTACAAAGTGAATGTGCTTTGAATGTGAGGTTGTATTATTAGAAGTCCTTTTTTTTACCTTGGATGGAAACGCAGATGCATTTTTATTTCTGGTCTGACAAACTCAGTTTACTCTTACATTACCCTGTGGGGGGAGTCTACTTCTTGTGTGATAATATTTTGTTTAGTTTGTTGCATGGGCCGTTCTTTTTTGTAAGTCCTCTCTTTATACTTGTATTAATGATAGTTGGTTTCTTATCCAATATTTGTATGTTCGATATCCTGTGCATTCGACATCCTTGTATGAGAAATGAAATTGATTTTTTTTTTCTCTTCAGGACAGAATGAATCTGGAAAAGTATGTTACTTTTGTAGATTTTCTAGTAATGTGTTCTGTAAAAGTTCGGGCCGTGCTAGAAATTAAGCCATAAAAATGGAAAAAGATGTTGGCTCCTTACCTTTGTGTATGTTCAGGTCTGGAATCACGACTTCTTTTGGGAATCCATGCAACCTGGAGGTGGAAACATGCCCAAACTTGGTGTTCTACAACAAATTGAAAAAGATTTTGGTTCTTTCATCAATTTCAGGGACAAGTTTATACAAGCGTCTCTTTCACTCTTTGGTTCTGGCTGGGTTTGGCTTGTTTGTAAGTTTTCAAACTTTGGTTAAACATTTTTTTAATAAGTGCTTTTTTAACACCTTTATAATAAGTACTTTTTGGTTGAAATAACTATCTGAATTTGAATCACCCAATTTGCAAATGGTACCGGGCTACCAGCTTATACATGGAAAATTGCCCAAAATAACCAAAAACCCAAAAACTTGTATCAAACTGACATCTTTTTTAAACATGTTTTTTTTAACCCTTTTGAGATGTGAAATGCCCAGTTTGCCCTCACTTTTAAATGTTGAGAGTGATCGATTGAGGTGTGGTAGAGAAGCTGAGAGTGATCGGCTGAGGTGTCTACTTGACCCCATTCTTATTATCAATAACATTGACAGTAGATGGTGCAAGGTTGGTGGAGAATAAATGTTGACAGGGAATAAATTGGAATATTGAAGTTACATTCATTGAAGTTGACTGATTATTGAAGAGGAAGAAGAAGAAACACAGAGAGAAGAAATGGGAAAGCAATTCATTTAAAACTGAGGGGAAAGGGGTATTTCACATCTCAAAAAGGTAAAAAAAGAATATATATATATATATATGTTTTTTTAAAACAGGATAGTTTGATAGAAGTTTTCGGGTTTTGGGTTATTTTGGGCAATTTTCCCTTGTTCTCTATCTCTCTGTCTTCTTTTCCTTATTTTTTTTTTCTTTTTTAAAGCGTGACTGTATTTATGATCTCTTCAAGATTTCCAGTGTTTTTGTAAAGTCTTTTCTTTGAGGGTTATTTCATCAGAACTTAGTGGACTGGCTATTACCTTAGCATTATTTTGTCTCCTCTTGGACTTCACTTCCGAAATTGCTTTTTCCTTATCATCAAATGTAACATATCATCACTTTTTTGCTGCTTTATAGAGCTGTTGCAGAGTGCCCAGTCAGAAAATCTGCAACCATTTATGGTTAATGATCGATACACAAACTTCGTTATCTAGTTATTAACTTATTATCTTCTTTCTCTGTCATTTCTCTGTTTAACTCTATGATCTCAAAAGCTTGACAAAATATTGTGCCTATCGTTTTTCGATATTCAAATTGACGATGTAGTTTTGTTTTATGAACGATCATTTGACACAATCTACTTAGTTATCTTGAATTGTTGTTCATTGCATCAGTGAAGAGACAAGAAAAACGACTTGCTGTGATCACAACTTCGAATGCGATAAGCCCACTTCTTTGGGATGACATTGTAAGTCAATGCCCCATTTTGTGTACAAGGTTCTTTTATTCTCAGAAATTTGATTCTCCATATTTTGTTGTGCAGCCAATCATTTGCTTGGATATGTGGGAGGTATCAAATACTTTTCTACCTTCAAATATTTTGTTTTGTTTCTTCATTTGAGCAGATCATATATCATATATGATAACATTTGATTGTTTTTTTTCCCTCCAGCATGCTTACTATCTGGATTACAAGGTATGAAACTCTGCCTGATTGTCTGCTATATTTTATTTATGGATTAAAATACCATTTTAGTCCAAGTAATTTGAAACTCATCTCATTTTGGCCCCGTACTTCCACATGTCCAAATTTAGTCATTATACTTTCAATTGAATTTAAAGTTAGTTCTTATAGTTAGTTTGAAGTTAGCTTTTACTGAATTTGGTTAAAAAAATCCATTCAAGTAAAGACACCATGTAAATATCTTTCCAAAATTTATAGATTGAAGACTAATAGAGATGCTCGTAGCCTACTTTCACTAATTTTTTAGAAGGTTTTGTCCACAAGAAGGCCAACTTTGGGAGGCCTGGATACCTTGTATTATCAAGTTATTTAAGTGAGATTTCTGTGATTGATTTTATTTGTATCTTACCTTGACACAGAATGATAAAAAAGAGTATGTCAATGTGTTCATGGACCATCTTGTATCGTGGAATGCAGCGTTGGGGCGTATGGCCCGAGCAGAGTGTTTCGTGAATTTAGGCGAGCCGAAAATTCCTGTAGCGTAATAACATTCATTGATACTAGAGTTACTCGCAAGTGGTCCAACGAAGCGACGGAGGGAATCTCTAAACCTCATGTATGTGATCAAGTTCCCTTTCAGGTTTGA

mRNA sequence

ATGATTTCTTGCTGCAATCCTATGAACGTTAGCTCTCCGCTTCTGCTGACCAATTCTTCCCAGCAGTTAAAGAGCACCAAGCATCCTTACTTGTATCAGAGTAAGTTGCATAAGACAAGCTCTGATGTAACCACAAAAGGAATGAAAGTTTTTGCTTATTATGGCTTGAAGACACCCCCCTATGAACTTGATGCTTTAGAACCATATATGAGTCAGAGGACATTGGAGGTTCACTGGGGTAAACATCACCGTAATTACGTTGAAGGTTTGAACAAGCAACTGAGCCAAAATGATATTCTATATGGCCACACTTTGGATGAACTTCTCAAAGTAACATATAACAATGGGAATCCTTTACCTGAGTTTAACAATGCTGCCCAGGTCTGGAATCACGACTTCTTTTGGGAATCCATGCAACCTGGAGGTGGAAACATGCCCAAACTTGGTGTTCTACAACAAATTGAAAAAGATTTTGGTTCTTTCATCAATTTCAGGGACAAGTTTATACAAGCGTCTCTTTCACTCTTTGGTTCTGGCTGGGTTTGGCTTGTTTTGAAGAGACAAGAAAAACGACTTGCTGTGATCACAACTTCGAATGCGATAAGCCCACTTCTTTGGGATGACATTGTAAGTCAATGCCCCATTTTGTGTACAAGCGTTGGGGCGTATGGCCCGAGCAGAGTGTTTCGTGAATTTAGGCGAGCCGAAAATTCCTGTAGCGTAATAACATTCATTGATACTAGAGTTACTCGCAAGTGGTCCAACGAAGCGACGGAGGGAATCTCTAAACCTCATGTATGTGATCAAGTTCCCTTTCAGGTTTGA

Coding sequence (CDS)

ATGATTTCTTGCTGCAATCCTATGAACGTTAGCTCTCCGCTTCTGCTGACCAATTCTTCCCAGCAGTTAAAGAGCACCAAGCATCCTTACTTGTATCAGAGTAAGTTGCATAAGACAAGCTCTGATGTAACCACAAAAGGAATGAAAGTTTTTGCTTATTATGGCTTGAAGACACCCCCCTATGAACTTGATGCTTTAGAACCATATATGAGTCAGAGGACATTGGAGGTTCACTGGGGTAAACATCACCGTAATTACGTTGAAGGTTTGAACAAGCAACTGAGCCAAAATGATATTCTATATGGCCACACTTTGGATGAACTTCTCAAAGTAACATATAACAATGGGAATCCTTTACCTGAGTTTAACAATGCTGCCCAGGTCTGGAATCACGACTTCTTTTGGGAATCCATGCAACCTGGAGGTGGAAACATGCCCAAACTTGGTGTTCTACAACAAATTGAAAAAGATTTTGGTTCTTTCATCAATTTCAGGGACAAGTTTATACAAGCGTCTCTTTCACTCTTTGGTTCTGGCTGGGTTTGGCTTGTTTTGAAGAGACAAGAAAAACGACTTGCTGTGATCACAACTTCGAATGCGATAAGCCCACTTCTTTGGGATGACATTGTAAGTCAATGCCCCATTTTGTGTACAAGCGTTGGGGCGTATGGCCCGAGCAGAGTGTTTCGTGAATTTAGGCGAGCCGAAAATTCCTGTAGCGTAATAACATTCATTGATACTAGAGTTACTCGCAAGTGGTCCAACGAAGCGACGGAGGGAATCTCTAAACCTCATGTATGTGATCAAGTTCCCTTTCAGGTTTGA

Protein sequence

MISCCNPMNVSSPLLLTNSSQQLKSTKHPYLYQSKLHKTSSDVTTKGMKVFAYYGLKTPPYELDALEPYMSQRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFIQASLSLFGSGWVWLVLKRQEKRLAVITTSNAISPLLWDDIVSQCPILCTSVGAYGPSRVFREFRRAENSCSVITFIDTRVTRKWSNEATEGISKPHVCDQVPFQV

Homology

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BLAST of Lsi06G001600 vs. Swiss-Prot
Match: SODF3_ARATH (Superoxide dismutase [Fe] 3, chloroplastic OS=Arabidopsis thaliana GN=FSD3 PE=1 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.2e-77
Identity = 139/205 (67.80%), Postives = 168/205 (81.95%), Query Frame = 1


Query: 16  LTNSSQQLKSTKHPYLYQSKLHKTSSDVTTKGMKVFAYYGLKTPPYELDALEPYMSQRTL 75
           +++SS +LKS K   L  S   +  S  +  G+KV AYYGLKTPPY LDALEPYMS+RTL
Sbjct: 14  ISDSSIRLKSPK--LLNLSNQQRRRSLRSRGGLKVEAYYGLKTPPYPLDALEPYMSRRTL 73

Query: 76  EVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLPEFNNAAQVWNHDFFW 135
           EVHWGKHHR YV+ LNKQL ++D LYG+T++EL+K TYNNGNPLPEFNNAAQV+NHDFFW
Sbjct: 74  EVHWGKHHRGYVDNLNKQLGKDDRLYGYTMEELIKATYNNGNPLPEFNNAAQVYNHDFFW 133

Query: 136 ESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFIQASLSLFGSGWVWLVLKRQEKRLAVI 195
           ESMQPGGG+ P+ GVL+QI+KDFGSF NFR+KF  A+L+ FGSGWVWLVLKR+E+RL V+
Sbjct: 134 ESMQPGGGDTPQKGVLEQIDKDFGSFTNFREKFTNAALTQFGSGWVWLVLKREERRLEVV 193

Query: 196 TTSNAISPLLWDDIVSQCPILCTSV 221
            TSNAI+PL+WDDI    PI+C  V
Sbjct: 194 KTSNAINPLVWDDI----PIICVDV 212

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BLAST of Lsi06G001600 vs. Swiss-Prot
Match: SODF2_ORYSJ (Superoxide dismutase [Fe] 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0143000 PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.1e-66
Identity = 122/220 (55.45%), Postives = 159/220 (72.27%), Query Frame = 1


Query: 49  KVFAYYGLKTPPYELDALEPYMSQRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDEL 108
           KV AYY L TPPY+LDALEPY+S+RT+E+HWGKH ++YV+ LNKQL+ + + YG+TL+EL
Sbjct: 38  KVVAYYALTTPPYKLDALEPYISKRTVELHWGKHQQDYVDSLNKQLATS-MFYGYTLEEL 97

Query: 109 LKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKF 168
           +K  YNNGNPLPE+NNAAQVWNH FFWESMQP GG  P  GVLQQIEKDFGSF NFR++F
Sbjct: 98  IKEAYNNGNPLPEYNNAAQVWNHHFFWESMQPEGGGSPGRGVLQQIEKDFGSFTNFREEF 157

Query: 169 IQASLSLFGSGWVWLVLKRQEKRLAVITTSNAISPLLWDDIVSQCPILCTSVGAYGPSRV 228
           I+++LSL GSGWVWLVLKR+E++ +V+ T NAISPL   DI    P++   +  +     
Sbjct: 158 IRSALSLLGSGWVWLVLKRKERKFSVVHTQNAISPLALGDI----PLINLDLWEHAYYLD 217

Query: 229 FREFRR--AENSCSVITFIDTRVTRKWSNEATEGISKPHV 267
           +++ RR    N    +   DT   R    EA   + +P++
Sbjct: 218 YKDDRRMYVTNFIDHLVSWDTVTLRMMRAEAFVNLGEPNI 252

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BLAST of Lsi06G001600 vs. Swiss-Prot
Match: SODF2_ARATH (Superoxide dismutase [Fe] 2, chloroplastic OS=Arabidopsis thaliana GN=FSD2 PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.9e-47
Identity = 88/173 (50.87%), Postives = 117/173 (67.63%), Query Frame = 1


Query: 50  VFAYYGLKTPPYELDALEPYMSQRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELL 109
           + A + LK PPY LDALEP+MS+ TL+ HWGKHH+ YVE LNKQ+   D L   +L+E++
Sbjct: 49  ITAGFELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLNKQILGTD-LDALSLEEVV 108

Query: 110 KVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFI 169
            ++YN GN LP FNNAAQ WNH+FFWES+QPGGG  P   +L+ IE+DFGSF  F ++F 
Sbjct: 109 LLSYNKGNMLPAFNNAAQAWNHEFFWESIQPGGGGKPTGELLRLIERDFGSFEEFLERFK 168

Query: 170 QASLSLFGSGWVWLVL---------------KRQEKRLAVITTSNAISPLLWD 208
            A+ S FGSGW WL                 K ++K+L ++ T NA++PL+WD
Sbjct: 169 SAAASNFGSGWTWLAYKANRLDVANAVNPLPKEEDKKLVIVKTPNAVNPLVWD 220

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BLAST of Lsi06G001600 vs. Swiss-Prot
Match: SODF_NICPL (Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia GN=SODB PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 5.4e-46
Identity = 87/167 (52.10%), Postives = 114/167 (68.26%), Query Frame = 1


Query: 54  YGLKTPPYELDALEPYMSQRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTY 113
           + L+ PPY +DALEP+MS RT E HWGKHHR YV+ LNKQ+   + L G TL++++ VTY
Sbjct: 2   FELQPPPYPMDALEPHMSSRTFEFHWGKHHRAYVDNLNKQIDGTE-LDGKTLEDIILVTY 61

Query: 114 NNGNPLPEFNNAAQVWNHDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFIQASL 173
           N G PLP FNNAAQ WNH FFWESM+P GG  P   +L+ I +DFGS+  F  +F  A+ 
Sbjct: 62  NKGAPLPAFNNAAQAWNHQFFWESMKPNGGGEPSGELLELINRDFGSYDAFVKEFKAAAA 121

Query: 174 SLFGSGWVWLVLKRQEKRLAVITTSNAISPLLWDDIVSQCPILCTSV 221
           + FGSGW WL  K +EK+LA++ T NA +PL    ++   P+L   V
Sbjct: 122 TQFGSGWAWLAYKPEEKKLALVKTPNAENPL----VLGYTPLLTIDV 163

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BLAST of Lsi06G001600 vs. Swiss-Prot
Match: SODF_SOYBN (Superoxide dismutase [Fe], chloroplastic OS=Glycine max GN=SODB PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 5.4e-46
Identity = 87/176 (49.43%), Postives = 117/176 (66.48%), Query Frame = 1


Query: 46  KGMKVFAYYGLKTPPYELDALEPYMSQRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTL 105
           +G KV A + LK PPY L+ LEP MSQ+TLE HWGKHH+ YVE L KQ+   + L G +L
Sbjct: 19  EGPKVNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHKTYVENLKKQVVGTE-LDGKSL 78

Query: 106 DELLKVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFR 165
           +E++  +YN G+ LP FNNAAQVWNHDFFWE M+PGGG  P   +L+ IE+DFGSF+ F 
Sbjct: 79  EEIIVTSYNKGDILPAFNNAAQVWNHDFFWECMKPGGGGKPSGELLELIERDFGSFVKFL 138

Query: 166 DKFIQASLSLFGSGWVWLVLKR---------------QEKRLAVITTSNAISPLLW 207
           D+F  A+ + FGSGW WL  +                ++ +L V+ + NA++PL+W
Sbjct: 139 DEFKAAAATQFGSGWAWLAYRARKFDGENVANPPSPDEDNKLVVLKSPNAVNPLVW 193

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BLAST of Lsi06G001600 vs. TrEMBL
Match: A0A0S2LKX3_CUCME (Superoxide dismutase 2 OS=Cucumis melo PE=2 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.1e-109
Identity = 192/217 (88.48%), Postives = 203/217 (93.55%), Query Frame = 1


Query: 1   MISCCNPMNVSSPLLLTNSSQQLKSTKHPYLYQSKLHKTSSDVTTKGMKVFAYYGLKTPP 60
           MI+CCN +NV+SP LLTNSSQQLK T HPYL+QSKL K SSDVTT+GMKV AYYGLKTPP
Sbjct: 1   MITCCNSLNVNSPFLLTNSSQQLKKTMHPYLHQSKLQKRSSDVTTRGMKVAAYYGLKTPP 60

Query: 61  YELDALEPYMSQRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120
           YELDALEPYMS+RTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP
Sbjct: 61  YELDALEPYMSRRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120

Query: 121 EFNNAAQVWNHDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFIQASLSLFGSGW 180
           EFNNAAQVWNHDFFWESMQPGGG+MPKLGVLQQIEKDFGSF NFRDKFI AS+S FGSGW
Sbjct: 121 EFNNAAQVWNHDFFWESMQPGGGDMPKLGVLQQIEKDFGSFTNFRDKFILASISHFGSGW 180

Query: 181 VWLVLKRQEKRLAVITTSNAISPLLWDDIVSQCPILC 218
           VWLVLKRQEKRLAVITTSNA+SP+LWDDI    PI+C
Sbjct: 181 VWLVLKRQEKRLAVITTSNALSPILWDDI----PIIC 213

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BLAST of Lsi06G001600 vs. TrEMBL
Match: A0A0A0LWI3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G571850 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 3.4e-108
Identity = 190/217 (87.56%), Postives = 203/217 (93.55%), Query Frame = 1


Query: 1   MISCCNPMNVSSPLLLTNSSQQLKSTKHPYLYQSKLHKTSSDVTTKGMKVFAYYGLKTPP 60
           MISCCN +NV+SP LLTN SQQLKST+HPYL+QSKL K +SD TT+GMKV AYYGLKTPP
Sbjct: 1   MISCCNSLNVNSPFLLTNYSQQLKSTRHPYLHQSKLQKRNSDGTTRGMKVVAYYGLKTPP 60

Query: 61  YELDALEPYMSQRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120
           YELDALEPYMS+RTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP
Sbjct: 61  YELDALEPYMSRRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120

Query: 121 EFNNAAQVWNHDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFIQASLSLFGSGW 180
           EF+NAAQVWNHDFFWESMQPGGG+MPKLGVLQQIEKDFGSF NFR+KFI ASLS FGSGW
Sbjct: 121 EFDNAAQVWNHDFFWESMQPGGGDMPKLGVLQQIEKDFGSFTNFREKFILASLSHFGSGW 180

Query: 181 VWLVLKRQEKRLAVITTSNAISPLLWDDIVSQCPILC 218
           VWLVLKRQEKRLAVITTSNA+SP+LWDDI    PI+C
Sbjct: 181 VWLVLKRQEKRLAVITTSNALSPILWDDI----PIVC 213

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BLAST of Lsi06G001600 vs. TrEMBL
Match: A0A0H3YCR8_CAMSI (Iron superoxide dismutase 3 OS=Camellia sinensis GN=FSD3 PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 8.0e-81
Identity = 148/207 (71.50%), Postives = 171/207 (82.61%), Query Frame = 1


Query: 4   CCNPMNVSSPLLLTNS-SQQLKSTKHPYLYQSKLHKTSSDVTTKGMKVFAYYGLKTPPYE 63
           CCN    SS +L     S+ LK+ K P   +S+  K     T K  KV AY+GL+ PPY+
Sbjct: 8   CCNLFPTSSHILGAGDLSKLLKNPKLPL--RSQRQKREQHGTQKTPKVLAYHGLQKPPYK 67

Query: 64  LDALEPYMSQRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLPEF 123
           LDALEPYMSQRTLE+HWG+HHR YVEGLNKQL +NDILYGHT+DEL+KVTYNNGNPLPEF
Sbjct: 68  LDALEPYMSQRTLEMHWGEHHRLYVEGLNKQLEKNDILYGHTMDELVKVTYNNGNPLPEF 127

Query: 124 NNAAQVWNHDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFIQASLSLFGSGWVW 183
           NNAAQVWNHDFFWESMQPGGGNMP +G+LQQIEKDF SF NF++KFI+A+L+LFGSGWVW
Sbjct: 128 NNAAQVWNHDFFWESMQPGGGNMPIMGLLQQIEKDFASFNNFKEKFIEAALTLFGSGWVW 187

Query: 184 LVLKRQEKRLAVITTSNAISPLLWDDI 210
           LVLKR EKRL V+ TSNA+SPL+WDDI
Sbjct: 188 LVLKRSEKRLEVVRTSNAVSPLVWDDI 212

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BLAST of Lsi06G001600 vs. TrEMBL
Match: A0A151R579_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_041023 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.4e-80
Identity = 145/211 (68.72%), Postives = 177/211 (83.89%), Query Frame = 1


Query: 1   MISCC-NPMNVSSPLLLTNSSQQLKSTKHPYLYQSKLHKTSS-DVTTKGMKVFAYYGLKT 60
           M SC  NP+ +SS L+  + S++ K  K        LHK    D + +  K+ A+YGLKT
Sbjct: 1   MASCYFNPIPISSQLISADLSRKFKIPK-------LLHKKKRFDGSPRSSKITAFYGLKT 60

Query: 61  PPYELDALEPYMSQRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNP 120
           PPYELDALEPYMS+RT+++HWG++HRN++EGLNKQL ++DILYG+TLDEL+KVTYNNGNP
Sbjct: 61  PPYELDALEPYMSKRTIDMHWGEYHRNFIEGLNKQLEKDDILYGYTLDELVKVTYNNGNP 120

Query: 121 LPEFNNAAQVWNHDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFIQASLSLFGS 180
            PEFNNAA+VWNHDFFWESMQPGGGNMP LG+LQQIEKDFGSFINFR+KFI A+L+LFGS
Sbjct: 121 FPEFNNAAEVWNHDFFWESMQPGGGNMPTLGLLQQIEKDFGSFINFREKFIGAALTLFGS 180

Query: 181 GWVWLVLKRQEKRLAVITTSNAISPLLWDDI 210
           GWVWLVLKR+EKRLA++ TSNAI P++WDDI
Sbjct: 181 GWVWLVLKREEKRLAIVKTSNAICPIVWDDI 204

[Close]

BLAST of Lsi06G001600 vs. TrEMBL
Match: D7TES2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0042g00100 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.4e-80
Identity = 144/206 (69.90%), Postives = 172/206 (83.50%), Query Frame = 1


Query: 4   CCNPMNVSSPLLLTNSSQQLKSTKHPYLYQSKLHKTSSDVTTKGMKVFAYYGLKTPPYEL 63
           C N    SS +LLT+ SQ+ K  K     Q+  HK     + K  KV A+YGLK PPY+L
Sbjct: 62  CNNSFPASSHVLLTDLSQRWKCPK----LQNLRHKGQFHGSQKASKVLAFYGLKAPPYKL 121

Query: 64  DALEPYMSQRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLPEFN 123
           DALEP+MS+RTLE+HWG HHR YVEGLNKQL ++DILYGHTLDEL+KVTYNNGNPLPEFN
Sbjct: 122 DALEPHMSRRTLEMHWGDHHRGYVEGLNKQLEKDDILYGHTLDELVKVTYNNGNPLPEFN 181

Query: 124 NAAQVWNHDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFIQASLSLFGSGWVWL 183
           NAAQVWNHDFFWESMQPGGG+MP+LG+L+QIEKDFGSF NF++KF++A+L+LFGSGWVWL
Sbjct: 182 NAAQVWNHDFFWESMQPGGGDMPRLGLLEQIEKDFGSFTNFKEKFLEAALTLFGSGWVWL 241

Query: 184 VLKRQEKRLAVITTSNAISPLLWDDI 210
           VLKR E+ LAV+ TSNAI+P++WDDI
Sbjct: 242 VLKRNERCLAVVKTSNAINPIVWDDI 263

[Close]

BLAST of Lsi06G001600 vs. TAIR10
Match: AT5G23310.1 (AT5G23310.1 Fe superoxide dismutase 3)

HSP 1 Score: 291.2 bits (744), Expect = 6.7e-79
Identity = 139/205 (67.80%), Postives = 168/205 (81.95%), Query Frame = 1


Query: 16  LTNSSQQLKSTKHPYLYQSKLHKTSSDVTTKGMKVFAYYGLKTPPYELDALEPYMSQRTL 75
           +++SS +LKS K   L  S   +  S  +  G+KV AYYGLKTPPY LDALEPYMS+RTL
Sbjct: 14  ISDSSIRLKSPK--LLNLSNQQRRRSLRSRGGLKVEAYYGLKTPPYPLDALEPYMSRRTL 73

Query: 76  EVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLPEFNNAAQVWNHDFFW 135
           EVHWGKHHR YV+ LNKQL ++D LYG+T++EL+K TYNNGNPLPEFNNAAQV+NHDFFW
Sbjct: 74  EVHWGKHHRGYVDNLNKQLGKDDRLYGYTMEELIKATYNNGNPLPEFNNAAQVYNHDFFW 133

Query: 136 ESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFIQASLSLFGSGWVWLVLKRQEKRLAVI 195
           ESMQPGGG+ P+ GVL+QI+KDFGSF NFR+KF  A+L+ FGSGWVWLVLKR+E+RL V+
Sbjct: 134 ESMQPGGGDTPQKGVLEQIDKDFGSFTNFREKFTNAALTQFGSGWVWLVLKREERRLEVV 193

Query: 196 TTSNAISPLLWDDIVSQCPILCTSV 221
            TSNAI+PL+WDDI    PI+C  V
Sbjct: 194 KTSNAINPLVWDDI----PIICVDV 212

[Close]

BLAST of Lsi06G001600 vs. TAIR10
Match: AT5G51100.1 (AT5G51100.1 Fe superoxide dismutase 2)

HSP 1 Score: 189.5 bits (480), Expect = 2.7e-48
Identity = 88/173 (50.87%), Postives = 117/173 (67.63%), Query Frame = 1


Query: 50  VFAYYGLKTPPYELDALEPYMSQRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELL 109
           + A + LK PPY LDALEP+MS+ TL+ HWGKHH+ YVE LNKQ+   D L   +L+E++
Sbjct: 49  ITAGFELKPPPYPLDALEPHMSRETLDYHWGKHHKTYVENLNKQILGTD-LDALSLEEVV 108

Query: 110 KVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFI 169
            ++YN GN LP FNNAAQ WNH+FFWES+QPGGG  P   +L+ IE+DFGSF  F ++F 
Sbjct: 109 LLSYNKGNMLPAFNNAAQAWNHEFFWESIQPGGGGKPTGELLRLIERDFGSFEEFLERFK 168

Query: 170 QASLSLFGSGWVWLVL---------------KRQEKRLAVITTSNAISPLLWD 208
            A+ S FGSGW WL                 K ++K+L ++ T NA++PL+WD
Sbjct: 169 SAAASNFGSGWTWLAYKANRLDVANAVNPLPKEEDKKLVIVKTPNAVNPLVWD 220

[Close]

BLAST of Lsi06G001600 vs. TAIR10
Match: AT4G25100.1 (AT4G25100.1 Fe superoxide dismutase 1)

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-43
Identity = 84/171 (49.12%), Postives = 114/171 (66.67%), Query Frame = 1


Query: 50  VFAYYGLKTPPYELDALEPYMSQRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELL 109
           V A Y LK PP+ LDALEP+MS++TLE HWGKHHR YV+ L KQ+   + L G  L+ ++
Sbjct: 7   VTANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNLKKQVLGTE-LEGKPLEHII 66

Query: 110 KVTYNNGNPLPEFNNAAQVWNHDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFI 169
             TYNNG+ LP FNNAAQ WNH+FFWESM+PGGG  P   +L  +E+DF S+  F ++F 
Sbjct: 67  HSTYNNGDLLPAFNNAAQAWNHEFFWESMKPGGGGKPSGELLALLERDFTSYEKFYEEFN 126

Query: 170 QASLSLFGSGWVWLVLKRQEKRLAVITTSNAISPLLWDDIVSQCPILCTSV 221
            A+ + FG+GW WL    +  +L V+ T NA++PL    ++   P+L   V
Sbjct: 127 AAAATQFGAGWAWLAYSNE--KLKVVKTPNAVNPL----VLGSFPLLTIDV 170

[Close]

BLAST of Lsi06G001600 vs. TAIR10
Match: AT3G56350.1 (AT3G56350.1 Iron/manganese superoxide dismutase family protein)

HSP 1 Score: 85.1 bits (209), Expect = 7.3e-17
Identity = 55/173 (31.79%), Postives = 79/173 (45.66%), Query Frame = 1


Query: 31  LYQSKLHKTSSDVTTKGMKVFAYYGLKTPPYELDALEPYMSQRTLEVHWGKHHRNYVEGL 90
           ++ + LH          ++      L   PY  DALEP +S+  + +H  KHH+ YV   
Sbjct: 13  IFATTLHDARGATMEPCLESMKTASLPDLPYAYDALEPAISEEIMRLHHQKHHQTYVTQY 72

Query: 91  NKQL-SQNDILYGHTLDELLKVTYNNGNPLPEFNNAAQVWNHDFFWESMQP---GGGNMP 150
           NK L S    +       ++K+       L +FN    V NH  FW+++ P   GGG  P
Sbjct: 73  NKALNSLRSAMADGDHSSVVKL-----QSLIKFNGGGHV-NHAIFWKNLAPVHEGGGKPP 132

Query: 151 KLGVLQQIEKDFGSFINFRDKFIQASLSLFGSGWVWLVLKRQEKRLAVITTSN 200
              +   I+  FGS      K      ++ GSGWVW  L R+ KRL V TT+N
Sbjct: 133 HDPLASAIDAHFGSLEGLIQKMNAEGAAVQGSGWVWFGLDRELKRLVVETTAN 179

[Close]

BLAST of Lsi06G001600 vs. TAIR10
Match: AT3G10920.1 (AT3G10920.1 manganese superoxide dismutase 1)

HSP 1 Score: 85.1 bits (209), Expect = 7.3e-17
Identity = 57/168 (33.93%), Postives = 83/168 (49.40%), Query Frame = 1


Query: 36  LHKTSSDVTT-KGMKVFAYYGLKTPPYELDALEPYMSQRTLEVHWGKHHRNYVEGLNKQL 95
           L +TSS +   +G++ F    L   PY+  ALEP +S   +++H  KHH+ YV   N  L
Sbjct: 15  LKETSSRLLRIRGIQTFTLPDL---PYDYGALEPAISGEIMQIHHQKHHQAYVTNYNNAL 74

Query: 96  SQNDILYGHTLDELLKVTYNNGNPLPEFNNAAQVWNHDFFWESMQP---GGGNMPKLGVL 155
            Q D      +++    T        +FN    V NH  FW+++ P   GGG  PK  + 
Sbjct: 75  EQLD----QAVNKGDASTVVKLQSAIKFNGGGHV-NHSIFWKNLAPSSEGGGEPPKGSLG 134

Query: 156 QQIEKDFGSFINFRDKFIQASLSLFGSGWVWLVLKRQEKRLAVITTSN 200
             I+  FGS      K      ++ GSGWVWL L ++ K+L V TT+N
Sbjct: 135 SAIDAHFGSLEGLVKKMSAEGAAVQGSGWVWLGLDKELKKLVVDTTAN 174

[Close]

BLAST of Lsi06G001600 vs. NCBI nr
Match: gi|953268162|gb|ALO62043.1| (superoxide dismutase 2 [Cucumis melo])

HSP 1 Score: 404.4 bits (1038), Expect = 1.5e-109
Identity = 192/217 (88.48%), Postives = 203/217 (93.55%), Query Frame = 1


Query: 1   MISCCNPMNVSSPLLLTNSSQQLKSTKHPYLYQSKLHKTSSDVTTKGMKVFAYYGLKTPP 60
           MI+CCN +NV+SP LLTNSSQQLK T HPYL+QSKL K SSDVTT+GMKV AYYGLKTPP
Sbjct: 1   MITCCNSLNVNSPFLLTNSSQQLKKTMHPYLHQSKLQKRSSDVTTRGMKVAAYYGLKTPP 60

Query: 61  YELDALEPYMSQRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120
           YELDALEPYMS+RTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP
Sbjct: 61  YELDALEPYMSRRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120

Query: 121 EFNNAAQVWNHDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFIQASLSLFGSGW 180
           EFNNAAQVWNHDFFWESMQPGGG+MPKLGVLQQIEKDFGSF NFRDKFI AS+S FGSGW
Sbjct: 121 EFNNAAQVWNHDFFWESMQPGGGDMPKLGVLQQIEKDFGSFTNFRDKFILASISHFGSGW 180

Query: 181 VWLVLKRQEKRLAVITTSNAISPLLWDDIVSQCPILC 218
           VWLVLKRQEKRLAVITTSNA+SP+LWDDI    PI+C
Sbjct: 181 VWLVLKRQEKRLAVITTSNALSPILWDDI----PIIC 213

[Close]

BLAST of Lsi06G001600 vs. NCBI nr
Match: gi|659099633|ref|XP_008450699.1| (PREDICTED: superoxide dismutase [Fe])

HSP 1 Score: 401.0 bits (1029), Expect = 1.7e-108
Identity = 190/217 (87.56%), Postives = 203/217 (93.55%), Query Frame = 1


Query: 1   MISCCNPMNVSSPLLLTNSSQQLKSTKHPYLYQSKLHKTSSDVTTKGMKVFAYYGLKTPP 60
           MI+CCN +NV+SP LLTNSSQQLK T+HPYL QSKL K SSDVTT+GMKV AYYGLKTPP
Sbjct: 1   MITCCNSLNVNSPFLLTNSSQQLKKTRHPYLRQSKLQKRSSDVTTRGMKVAAYYGLKTPP 60

Query: 61  YELDALEPYMSQRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120
           YELDALEPYMS++TLEVHWGKHHRNYVEGLNKQLSQ+DILYGHTLDELLKVTYNNGNPLP
Sbjct: 61  YELDALEPYMSRKTLEVHWGKHHRNYVEGLNKQLSQHDILYGHTLDELLKVTYNNGNPLP 120

Query: 121 EFNNAAQVWNHDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFIQASLSLFGSGW 180
           EFNNAAQVWNHDFFWESMQPGGG+MPKLGVLQQIEKDFGSF NFRDKFI AS+S FGSGW
Sbjct: 121 EFNNAAQVWNHDFFWESMQPGGGDMPKLGVLQQIEKDFGSFTNFRDKFILASISHFGSGW 180

Query: 181 VWLVLKRQEKRLAVITTSNAISPLLWDDIVSQCPILC 218
           VWLVLKRQEKRLAVITTSNA+SP+LWDDI    PI+C
Sbjct: 181 VWLVLKRQEKRLAVITTSNALSPILWDDI----PIIC 213

[Close]

BLAST of Lsi06G001600 vs. NCBI nr
Match: gi|778662585|ref|XP_011659912.1| (PREDICTED: superoxide dismutase [Fe])

HSP 1 Score: 399.4 bits (1025), Expect = 4.9e-108
Identity = 190/217 (87.56%), Postives = 203/217 (93.55%), Query Frame = 1


Query: 1   MISCCNPMNVSSPLLLTNSSQQLKSTKHPYLYQSKLHKTSSDVTTKGMKVFAYYGLKTPP 60
           MISCCN +NV+SP LLTN SQQLKST+HPYL+QSKL K +SD TT+GMKV AYYGLKTPP
Sbjct: 1   MISCCNSLNVNSPFLLTNYSQQLKSTRHPYLHQSKLQKRNSDGTTRGMKVVAYYGLKTPP 60

Query: 61  YELDALEPYMSQRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120
           YELDALEPYMS+RTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP
Sbjct: 61  YELDALEPYMSRRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120

Query: 121 EFNNAAQVWNHDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFIQASLSLFGSGW 180
           EF+NAAQVWNHDFFWESMQPGGG+MPKLGVLQQIEKDFGSF NFR+KFI ASLS FGSGW
Sbjct: 121 EFDNAAQVWNHDFFWESMQPGGGDMPKLGVLQQIEKDFGSFTNFREKFILASLSHFGSGW 180

Query: 181 VWLVLKRQEKRLAVITTSNAISPLLWDDIVSQCPILC 218
           VWLVLKRQEKRLAVITTSNA+SP+LWDDI    PI+C
Sbjct: 181 VWLVLKRQEKRLAVITTSNALSPILWDDI----PIVC 213

[Close]

BLAST of Lsi06G001600 vs. NCBI nr
Match: gi|470123427|ref|XP_004297728.1| (PREDICTED: superoxide dismutase [Fe])

HSP 1 Score: 310.5 bits (794), Expect = 3.0e-81
Identity = 146/207 (70.53%), Postives = 174/207 (84.06%), Query Frame = 1


Query: 11  SSPLLLTNSSQQLKSTKHPYLYQSKLHKTSSDVTTKGMKVFAYYGLKTPPYELDALEPYM 70
           SS LLL +SS   K+ K    +Q K  K  +D + +  KV AYYGLK PPY+LDALEPYM
Sbjct: 9   SSHLLLIHSSHCFKTPK--LSHQCKQQKRRADGSQRASKVVAYYGLKEPPYKLDALEPYM 68

Query: 71  SQRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLPEFNNAAQVWN 130
           SQRTLEVHWG HHRNYVEGLNKQL ++DILYG+T DEL+K TYNNGNPLPEFNNAAQVWN
Sbjct: 69  SQRTLEVHWGGHHRNYVEGLNKQLEKSDILYGYTFDELVKATYNNGNPLPEFNNAAQVWN 128

Query: 131 HDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFIQASLSLFGSGWVWLVLKRQEK 190
           HDFFW+SMQPGGG+MPKLGVL+QIEKDFGS+ +FR+KFI+A+L+LFGSGWVWLVLKR+E+
Sbjct: 129 HDFFWDSMQPGGGDMPKLGVLEQIEKDFGSYASFREKFIEAALTLFGSGWVWLVLKREER 188

Query: 191 RLAVITTSNAISPLLWDDIVSQCPILC 218
           +L ++ TSNAI P++WDDI    PI+C
Sbjct: 189 QLKIVRTSNAICPIVWDDI----PIIC 209

[Close]

BLAST of Lsi06G001600 vs. NCBI nr
Match: gi|658052347|ref|XP_008361911.1| (PREDICTED: superoxide dismutase [Fe])

HSP 1 Score: 309.7 bits (792), Expect = 5.1e-81
Identity = 146/209 (69.86%), Postives = 169/209 (80.86%), Query Frame = 1


Query: 1   MISCCNPMNVSSPLLLTNSSQQLKSTKHPYLYQSKLHKTSSDVTTKGMKVFAYYGLKTPP 60
           M+   +P   SS LLLT  S   KS++ P     K  K   D + +  +V  YYGLK PP
Sbjct: 2   MLCFSSPSPPSSHLLLTEFSHSFKSSQLPL--PCKQQKRQPDGSPRASRVVGYYGLKNPP 61

Query: 61  YELDALEPYMSQRTLEVHWGKHHRNYVEGLNKQLSQNDILYGHTLDELLKVTYNNGNPLP 120
           Y+LDALEPYMSQRTLEVHWG HHRNYVEGLNKQL ++D+LYG+T DEL+K TYNNGNPLP
Sbjct: 62  YKLDALEPYMSQRTLEVHWGGHHRNYVEGLNKQLEKSDVLYGYTFDELVKATYNNGNPLP 121

Query: 121 EFNNAAQVWNHDFFWESMQPGGGNMPKLGVLQQIEKDFGSFINFRDKFIQASLSLFGSGW 180
           EFNNAAQVWNHDFFWESMQPGGG MP+LGVLQQIEKDFGSF NFR+KF +A+L+LFGSGW
Sbjct: 122 EFNNAAQVWNHDFFWESMQPGGGEMPQLGVLQQIEKDFGSFSNFREKFTEAALTLFGSGW 181

Query: 181 VWLVLKRQEKRLAVITTSNAISPLLWDDI 210
           VWLVLKR+E+RL +I TSNAI P++WDDI
Sbjct: 182 VWLVLKREERRLQIIKTSNAICPIVWDDI 208

The following BLAST results are available for this feature:

BLAST of Lsi06G001600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SODF3_ARATH	1.2e-77	67.80	Superoxide dismutase [Fe] 3, chloroplastic OS=Arabidopsis thaliana GN=FSD3 PE=1 ...	[more]
SODF2_ORYSJ	6.1e-66	55.45	Superoxide dismutase [Fe] 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os...	[more]
SODF2_ARATH	4.9e-47	50.87	Superoxide dismutase [Fe] 2, chloroplastic OS=Arabidopsis thaliana GN=FSD2 PE=1 ...	[more]
SODF_NICPL	5.4e-46	52.10	Superoxide dismutase [Fe], chloroplastic (Fragment) OS=Nicotiana plumbaginifolia...	[more]
SODF_SOYBN	5.4e-46	49.43	Superoxide dismutase [Fe], chloroplastic OS=Glycine max GN=SODB PE=2 SV=1	[more]

BLAST of Lsi06G001600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0S2LKX3_CUCME	1.1e-109	88.48	Superoxide dismutase 2 OS=Cucumis melo PE=2 SV=1	[more]
A0A0A0LWI3_CUCSA	3.4e-108	87.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G571850 PE=4 SV=1	[more]
A0A0H3YCR8_CAMSI	8.0e-81	71.50	Iron superoxide dismutase 3 OS=Camellia sinensis GN=FSD3 PE=2 SV=1	[more]
A0A151R579_CAJCA	1.4e-80	68.72	Uncharacterized protein OS=Cajanus cajan GN=KK1_041023 PE=4 SV=1	[more]
D7TES2_VITVI	1.4e-80	69.90	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0042g00100 PE=4 SV=...	[more]

BLAST of Lsi06G001600 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23310.1	6.7e-79	67.80	Fe superoxide dismutase 3	[more]
AT5G51100.1	2.7e-48	50.87	Fe superoxide dismutase 2	[more]
AT4G25100.1	1.2e-43	49.12	Fe superoxide dismutase 1	[more]
AT3G56350.1	7.3e-17	31.79	Iron/manganese superoxide dismutase family protein	[more]
AT3G10920.1	7.3e-17	33.93	manganese superoxide dismutase 1	[more]

BLAST of Lsi06G001600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|953268162\|gb\|ALO62043.1\|	1.5e-109	88.48	superoxide dismutase 2 [Cucumis melo]	[more]
gi\|659099633\|ref\|XP_008450699.1\|	1.7e-108	87.56	PREDICTED: superoxide dismutase [Fe]	[more]
gi\|778662585\|ref\|XP_011659912.1\|	4.9e-108	87.56	PREDICTED: superoxide dismutase [Fe]	[more]
gi\|470123427\|ref\|XP_004297728.1\|	3.0e-81	70.53	PREDICTED: superoxide dismutase [Fe]	[more]
gi\|658052347\|ref\|XP_008361911.1\|	5.1e-81	69.86	PREDICTED: superoxide dismutase [Fe]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process
GO:0006801	superoxide metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0004784	superoxide dismutase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR019832	Mn/Fe_SOD_C
IPR019831	Mn/Fe_SOD_N
IPR001189	Mn/Fe_SOD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0019430	removal of superoxide radicals
biological_process	GO:0006801	superoxide metabolic process
cellular_component	GO:0042644	chloroplast nucleoid
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004784	superoxide dismutase activity
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G001600.1	Lsi06G001600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001189	Manganese/iron superoxide dismutase	PRINTS	PR01703	MNSODISMTASE	coord: 57..68 score: 2.6E-12coord: 122..135 score: 2.6E-12coord: 175..183 score: 2.6E-12coord: 78..91 score: 2.6
IPR001189	Manganese/iron superoxide dismutase	PANTHER	PTHR11404	SUPEROXIDE DISMUTASE 2	coord: 25..209 score: 2.5E
IPR019831	Manganese/iron superoxide dismutase, N-terminal	PFAM	PF00081	Sod_Fe_N	coord: 54..139 score: 1.8
IPR019831	Manganese/iron superoxide dismutase, N-terminal	unknown	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain	coord: 52..140 score: 1.02
IPR019832	Manganese/iron superoxide dismutase, C-terminal	PFAM	PF02777	Sod_Fe_C	coord: 149..219 score: 2.7
IPR019832	Manganese/iron superoxide dismutase, C-terminal	unknown	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain	coord: 138..220 score: 1.7
None	No IPR available	GENE3D	G3DSA:1.10.287.990		coord: 71..139 score: 1.1
None	No IPR available	PANTHER	PTHR11404:SF17	SUPEROXIDE DISMUTASE [FE] 3, CHLOROPLASTIC	coord: 25..209 score: 2.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G001600	Csa1G571850	Cucumber (Chinese Long) v2	culsiB058
Lsi06G001600	CSPI01G26930	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G001600	Cucsa.163650	Cucumber (Gy14) v1	cgylsiB270
Lsi06G001600	Cla011317	Watermelon (97103) v1	lsiwmB396
Lsi06G001600	MELO3C015351	Melon (DHL92) v3.5.1	lsimeB396
Lsi06G001600	ClCG03G016710	Watermelon (Charleston Gray)	lsiwcgB364
Lsi06G001600	MELO3C015351.2	Melon (DHL92) v3.6.1	lsimedB418
Lsi06G001600	Cla97C03G067030	Watermelon (97103) v2	lsiwmbB365
Lsi06G001600	CsGy1G026130	Cucumber (Gy14) v2	cgyblsiB055
Lsi06G001600	CsaV3_1G039270	Cucumber (Chinese Long) v3	cuclsiB068

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G001600	Cucurbita maxima (Rimu)	cmalsiB146
Lsi06G001600	Cucurbita moschata (Rifu)	cmolsiB130
Lsi06G001600	Cucurbita pepo (Zucchini)	cpelsiB564
Lsi06G001600	Silver-seed gourd	carlsiB501