Lsi06G001290 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G001290
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Alpha/beta-Hydrolases superfamily protein, putative
Location	chr06 : 1229898 .. 1234549 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTGGCTTATGTTCTGTGTAATGAGTTTTCAGTCTATATTGTGGTTTGCTGAGTTCAGAAATATCAATAGCCTTTCTAGGACGAGGACTTTCATGGATTTAAGTGTAACATCAATGATTCGGTTAGGCCTGCCTGCAGGGCTGTTTTAGCATTCAAGTCGGATTTTCATATCTTAGAAGTTAGAACCACTGTTTTTCTAAGCACAATGTGTAAAGTTTGAGTGAAGTAGGTCGTATATTATATGGCTTAACAAAATTAAATGAAATCTATTACTTTGAAATTTAACATTATCAAGCAGGACATGTTAATGGACATGTTAAGCATGAAGGTTGTTCAAATTCAAAGAAAAATCAAATTGATACATAGGAAGTTGGAGTGCTTGGGATTTTAGTTCTGATAGACTAGGGGAAAATAAAACTGATAGAGTCTAGAGAGGGGGAGAGAAATGAGTGATGTGACATGGATGACTTATTATTGAAGAAGTATAGACTTGGCCAATGAGGAGTTTGAGATGATATTTCTGTCAATTAGCCGTTGTTTTTTTTTTTTGGATATCCATGAGTGTTTGGGTCAGCTTACACGCGCCTCAACTAATCTCACGGGATAACCCGCTTGATCCTACAACGTTTGAGTATCAAGAAATCTCCTAAGATATTAAATCCTAGGTAAGTGATCACCATAGATTGAACCCATGACCTTTAGCCCTTTATTAATGTCATGCTCCTATTTACTACTAGGCCAACCCATGAGGGTTTCAATCAATAGTTGATATGATGGAAAAAGTTTCTTTTCTAGATTTTAGAGAGAGAGGTACATAGACAGATAGACTTACAATTGTGTTTGTGGAACTGGAGATAGCTGAGAGTTGGGAAGAGATGCTCAACTGCTCAACACTTCGAGCCTCAGGTGAGATTATTCGAGAGTCAAAATGGACGGAAATGAAAAAAGTTGACATGTACACATCTTAACACTATATTTGAGGCATCGTGTGTGCTTAACAGTTGATTGTAAGAGATTGCTTAGGCTCCTGGTGTGAGATGGTCAGTTTCTGGTTGGGAGAGAACCTTTTGAAACTCTCCTTAATGCATTCAGTTTGTAATCATGATTGTTTGACTTGTCCATGGTAATAGGCTGATTTCATCTGTCTTTGTGGATTGACTCCTAGATTATCATTTTTGTTTGCCTAAATGGTCTCCTTTAGCTAGCAAATGTTTATATTGTCTCCTTATCGAGGCCCAGTCACTTGATTCCACATTTCGCTCACCATCTTTGATAATCTATTTCTTCAACTTGCTGGTATATTAGACCTGTCATTCTCTCTTTCATTGTCAAATAAGCTCTTTATCTTTGTTGACCTCAGGAAGATGTAGCCGATGTCGTAGCTGACAGTATAGCTCAGTTCGTATCCTCATTACCCCCCACGGTTAGAAAAACTGCTGAAGAGCCTACTCCTGAACACATTCAGAAAGTTTTCGATGAATCAGGGAATAGCGACCACCACCACCACCACGATCATGGCAGCCATGGCATTCATGGAGCTGGCTACATGGACGGATATGGGCTCGGTAGTCATGCCTGGTAAACTAACATCCTCTTCTTTATGCAGGACACTCTCTCAAGAAGGGATCGGATATAAGCATACCTAAATGAGTCCCTTTGAGTCCTTACTTTTTCTGCCTGATTGATTGTACTTTTGCTTGAGCTTCTTAGGAAGGACGTCCTAACGGTAAACGTATCGTGACGACTCATTAACTTCTTAGATATCTCAAAAGTGTTTTTTTGTTACTGGACATATTAGATTGTTGCTTGCTGATTGGCCTGTATTTAATCGATCTGTTGCTTCATTGTTTTGAATGTATCTGATCTTACACTTTCTTTTCTTGAAACTGAAAATTTTGTTCAAAAGAAGACGAAAACTTATGCCAGTCTTGGTGTAGTTTTGTGTTGTAGGATGCAAGGCTTTAAATATGTATGGATTTATGAATGACAAGGTTTTATTTTTTGTGTTATCAAGTTTTGTTTTTATACCTCTGGCATAGCTCAACTGACCTAAGCTTGTATTATTCTTATTGACCTCACTCCATATATTGTCAAAAAGAACAAAAAAAACCTTATTTTAATATATTACTTATTTGTTATCTTTTTCTTTTTTCACTCTGAAAGAAACTTGATGAAAACAACCTTAAGGTCACGTTTACACACCTACAAAGAAGACAAAGAAGACATTCAAGTCGAAAATTCAATGAGTTAAGAAGATCATCAAGTCCAAAGATTGATAATCTAAGAAAATCAACAAGTCTAAAGATTAAAGTTTATATATTTGGTAAAAATAATTATAGTATAAAAATTGGAGATTTTAACAATACTACAAATGGTGTATCATTTATAGACTTGCAAATTTAATAATTATCATATTTATAAATTATTTATTTGTGTGACATATTTGCAAATATGACAATCAATTTTACTACCTATTACAATTATTCTAAATTCTAAGTTTAGCCTTGAACTTTTAGTTTTGTGTCAAATAGGATCCAAATTTTTTTAAAGTGCAACAGAGCTTTGAACTTTCATTTTTAGTTTCAATAAATACCTAAACCTTCAAAAGTATATAACAAATCTACATACTTTAAATTTTATATTTGATAGGTCGAAAAACTTTAATTTTGTATTTAGTAAATTTTTTATCTATTTGACAGTTTAAGAACTCACGAACTTACTAATAAAAAAATTGAAAGTTTTTTTTTTGGGCAACAATATGCTGGTTAAGAGATTCTAATCTTTGACTTTTTGGTCGAAAGTATATATTTTATATCAGTTGAATTATGCTCATATTGACATAAAATTGAAAGCTTAATATCTTATTTAGAATAAAAATTCAATTTTATTCCTAATAGAGTAATTAATTTCTAGAAATTTCTTTTATGCGAGGGATTTACTAGAGACCTTTCATAAATTAGATATAAAAGTATACAAATGAAGACATTTTAGACACTTACAAAAATTTCAAAGATTTAATCAACACAAATTTCAAAGTTCACAAATTTTTTTATGCCTGGTGTATTCCTTGATGATGTTCAATAAAAGCTTTGCTTCAACTATCATGAATTGACTTAATAGTCAATAAAGATCATGAATTTAATAAACGATTTAAAGAGAATGAGTATAATTCATGGTGGCTGCCTACCTAGAATAATAATAAGAAAAAGTATAATGAGAGCACCAAGGGACTTTATGACTTAAATGTTTAAGTAGATTGTACGTTAGTAGTTGAGTGTAGAGATGTTCCATTTTTCCCATGGAGACGAGGCCACGTGAGGACCTAAGGTGGGGATTTCCCGTTTAGGAAGGGAATGGGTAAAGGAGTGGGTAGAAAAAAAATTCCTCATGAGGTAAATGGAGAAGGGGAAGGGGGCCGGGATGAGGAATGATTCCCTCCCTGCCTCGCCCCGTTCCTCGTCCCCGCCCCATTAGCGTCTTTTATTTAATTATTATAATAATTTAATGTTGTGTTATTATTTATAAATATTGATATCTAAATTTCAAGTTTTATTGTTTAATGGTTAAGATATTGAATATATTTGAATTTAACCTTTAAATTTAGGTTGAATTTATGAATAATTTGGGGCAATTATTTCTTTCTTCTAATTTTTATGAGTAACTTTTTTTTAAAATTCAAATTGTTGATGTGGAACTAATCATATTAAAAAATTTAATAAGAAATTTAACTATTCAATTAAAATTTGACAATAATTTTATAGGGAATGAAATGGGAAGCTCCCCCACTCCATGGACATCTCTGGTTGAGTGTGTGTTAATACCAAATACATTTTTTTTTTTGTATCTGTATTTGGCTAGTTTTGTGTGTGTTTGAGGAGATGTTTTGATTTTGAAATTTTCTGAAGTTTTGTGGGGTTTTATGTTTTAACTTAAAGTTTTTGTGTTTTATTTTGGTTGCTAAAAAAATTAATGTAGGCATTAGACAAATAAGAGAAACATGAGAGTATATATATGAAATAAATTGGTTCTTTTCTAACTCAAAAAAATTTAAACAAATTGATCACTATACTAACAATAGAAGCGTTTTAAAACTTCTTTTTTAAAATTTTAGAATTATTTTTGTAACGAGGTATTAACAGTTTCTGTTCATATACTAACAATAAAGACATTTTTGAATGTTTTTAAAGTTTAAAAATATTTTTGATACTTTTAAAAGTGTATAGATATTTTTGAAATAAAACACTAACGGTTTCATTTAAAATAAATGATAAAAGATATTTCAAACTCTTTATAAAAGTTCAAAAATATTTTTTCCAAAGTTTATCTTTCTTTTTTTAATAATTTAGCCCAAAAGGTCCTCGACGATGGCAGGTTAGTTTTGTACTTTTGTTAAAGAATAAGGCTATTTTAGACAATTTCTCCAATTGTATGTCATTATACTAAAAAAAACTCCCTTCCTCTTCCATTTTACGCATCTAGCCCACCTTTGTTCCCGCTTTCATCCTCTCCGACACCGGCGTGCCTCTCACCCCTCCGGTGGTAGCAGTTTTGCGGCGCAGCTCTTCTTCTAAGACCCACGGCACGGCAGTGAAACCTACTCCGGGGAACTACGTGGCGGCACGATTGCCTCTTGCGCCATCTCCCTGA

mRNA sequence

ATGAATAGACTTACAATTGTGTTTGTGGAACTGGAGATAGCTGAGAGTTGGGAAGAGATGCTCAACTGCTCAACACTTCGAGCCTCAGCTAGCAAATGTTTATATTGTCTCCTTATCGAGGCCCAGTCACTTGATTCCACATTTCGCTCACCATCTTTGATAATCTATTTCTTCAACTTGCTGGAAGATGTAGCCGATGTCGTAGCTGACAGTATAGCTCAGTTCGTATCCTCATTACCCCCCACGGTTAGAAAAACTGCTGAAGAGCCTACTCCTGAACACATTCAGAAAGTTTTCGATGAATCAGGGAATAGCGACCACCACCACCACCACGATCATGGCAGCCATGGCATTCATGGAGCTGGCTACATGGACGGATATGGGCTCGGTAGTCATGCCTGGAAGGACGTCCTAACGCCCACCTTTGTTCCCGCTTTCATCCTCTCCGACACCGGCGTGCCTCTCACCCCTCCGGTGGTAGCAGTTTTGCGGCGCAGCTCTTCTTCTAAGACCCACGGCACGGCAGTGAAACCTACTCCGGGGAACTACGTGGCGGCACGATTGCCTCTTGCGCCATCTCCCTGA

Coding sequence (CDS)

ATGAATAGACTTACAATTGTGTTTGTGGAACTGGAGATAGCTGAGAGTTGGGAAGAGATGCTCAACTGCTCAACACTTCGAGCCTCAGCTAGCAAATGTTTATATTGTCTCCTTATCGAGGCCCAGTCACTTGATTCCACATTTCGCTCACCATCTTTGATAATCTATTTCTTCAACTTGCTGGAAGATGTAGCCGATGTCGTAGCTGACAGTATAGCTCAGTTCGTATCCTCATTACCCCCCACGGTTAGAAAAACTGCTGAAGAGCCTACTCCTGAACACATTCAGAAAGTTTTCGATGAATCAGGGAATAGCGACCACCACCACCACCACGATCATGGCAGCCATGGCATTCATGGAGCTGGCTACATGGACGGATATGGGCTCGGTAGTCATGCCTGGAAGGACGTCCTAACGCCCACCTTTGTTCCCGCTTTCATCCTCTCCGACACCGGCGTGCCTCTCACCCCTCCGGTGGTAGCAGTTTTGCGGCGCAGCTCTTCTTCTAAGACCCACGGCACGGCAGTGAAACCTACTCCGGGGAACTACGTGGCGGCACGATTGCCTCTTGCGCCATCTCCCTGA

Protein sequence

MNRLTIVFVELEIAESWEEMLNCSTLRASASKCLYCLLIEAQSLDSTFRSPSLIIYFFNLLEDVADVVADSIAQFVSSLPPTVRKTAEEPTPEHIQKVFDESGNSDHHHHHDHGSHGIHGAGYMDGYGLGSHAWKDVLTPTFVPAFILSDTGVPLTPPVVAVLRRSSSSKTHGTAVKPTPGNYVAARLPLAPSP

Homology

[Close]

BLAST of Lsi06G001290 vs. Swiss-Prot
Match: AXR4_ARATH (Protein AUXIN RESPONSE 4 OS=Arabidopsis thaliana GN=AXR4 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-08
Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 1


Query: 62  EDVADVVADSIAQFVSSLPPTVRKTAEEPTPEHIQKVFDESGNSDHHHHHDHGSHGIHGA 121
           E  +  +AD I++FVS LP ++R+ AEEP PE +QKV +E+   D H HH HG HG   A
Sbjct: 401 ESKSGELADYISEFVSLLPKSIRRVAEEPIPEEVQKVLEEAKAGDDHDHH-HG-HGHAHA 460

Query: 122 GYMDGYGLG 131
           GY D YGLG
Sbjct: 461 GYSDAYGLG 467

[Close]

BLAST of Lsi06G001290 vs. TrEMBL
Match: A0A0A0M1J7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570060 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.2e-24
Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 1


Query: 62  EDVADVVADSIAQFVSSLPPTVRKTAEEPTPEHIQKVFDESGNSDHHHHHDHGSHGIHGA 121
           EDVADVVADSI+QF+SSLPPTVRKTAEEPTPEHI + FDES NSDHHHHH H SHGI  A
Sbjct: 405 EDVADVVADSISQFISSLPPTVRKTAEEPTPEHIHEAFDESMNSDHHHHHHH-SHGI-PA 464

Query: 122 GYMDGYGLGSHAW 135
           GYM+GYGLGSHAW
Sbjct: 465 GYMEGYGLGSHAW 475

[Close]

BLAST of Lsi06G001290 vs. TrEMBL
Match: A0A0C9S2L9_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_18909_2033 transcribed RNA sequence OS=Wollemia nobilis PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.4e-15
Identity = 47/78 (60.26%), Postives = 57/78 (73.08%), Query Frame = 1


Query: 62  EDVADVVADSIAQFVSSLPPTVRKTAEEPTPEHIQKVFDESGNSDHHHHHD----HGSHG 121
           ED+A+ + ++IA+FVSSLPPT +   EEP PEHIQ++FDE G+  HH HHD    HG HG
Sbjct: 430 EDIAEEITEAIAKFVSSLPPTAKTVVEEPLPEHIQRMFDE-GHGHHHGHHDHVHHHGDHG 489

Query: 122 -IHGAGYMDGYGLGSHAW 135
             HG GYMDGYGLG  AW
Sbjct: 490 HSHGGGYMDGYGLGHGAW 506

[Close]

BLAST of Lsi06G001290 vs. TrEMBL
Match: A0A0D6R2A2_ARACU (Uncharacterized protein OS=Araucaria cunninghamii PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.2e-15
Identity = 46/79 (58.23%), Postives = 57/79 (72.15%), Query Frame = 1


Query: 62  EDVADVVADSIAQFVSSLPPTVRKTAEEPTPEHIQKVFDESGNSDHHHHHD----HGSHG 121
           ED+A+ + ++IA+FVSSLPPT +   EEP PEHIQ++FDE G+  HH HHD    HG HG
Sbjct: 430 EDIAEEITEAIAKFVSSLPPTAKTVVEEPLPEHIQRMFDE-GHGHHHDHHDHVHHHGDHG 489

Query: 122 -IHGAGYMDGYGLGSHAWK 136
             HG GYMDGYGLG   W+
Sbjct: 490 HSHGGGYMDGYGLGHGTWR 507

[Close]

BLAST of Lsi06G001290 vs. TrEMBL
Match: M5W4Y9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017101mg PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.7e-14
Identity = 47/79 (59.49%), Postives = 55/79 (69.62%), Query Frame = 1


Query: 62  EDVADVVADSIAQFVSSLPPTVRKTAEEPTPEHIQKVFDESGNSDHH-----HHHDHGSH 121
           ED AD VA++IA FVSSLP +VRK  EEP PEHIQK+FDE+ + +HH     H H HG  
Sbjct: 368 EDAADEVAENIAYFVSSLPASVRKVEEEPIPEHIQKMFDEAKSGEHHGHDDGHDHHHGHG 427

Query: 122 GIHGAGYMDGYGLG-SHAW 135
            +HG GY D YGLG SH W
Sbjct: 428 HVHGTGYPDAYGLGHSHGW 446

[Close]

BLAST of Lsi06G001290 vs. TrEMBL
Match: F6HZ08_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0128g00760 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.5e-14
Identity = 45/79 (56.96%), Postives = 54/79 (68.35%), Query Frame = 1


Query: 62  EDVADVVADSIAQFVSSLPPTVRKTAEEPTPEHIQKVFDESGNSDHHHHHDHGSHGIHG- 121
           ED AD +A++I +FVSSLP +VR+  EEP PEHIQK+ DE+   DHHHHH H  HG HG 
Sbjct: 395 EDAADELAENILRFVSSLPKSVRQVEEEPVPEHIQKMLDEAQGGDHHHHHHHHDHGAHGH 454

Query: 122 -----AGYMDGYGLGSHAW 135
                 GYM+ YGLG H W
Sbjct: 455 AHDHSDGYMNAYGLG-HGW 472

[Close]

BLAST of Lsi06G001290 vs. TAIR10
Match: AT1G54990.1 (AT1G54990.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 6.1e-10
Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 1


Query: 62  EDVADVVADSIAQFVSSLPPTVRKTAEEPTPEHIQKVFDESGNSDHHHHHDHGSHGIHGA 121
           E  +  +AD I++FVS LP ++R+ AEEP PE +QKV +E+   D H HH HG HG   A
Sbjct: 401 ESKSGELADYISEFVSLLPKSIRRVAEEPIPEEVQKVLEEAKAGDDHDHH-HG-HGHAHA 460

Query: 122 GYMDGYGLG 131
           GY D YGLG
Sbjct: 461 GYSDAYGLG 467

[Close]

BLAST of Lsi06G001290 vs. NCBI nr
Match: gi|659099535|ref|XP_008450650.1| (PREDICTED: protein AUXIN RESPONSE 4 [Cucumis melo])

HSP 1 Score: 127.9 bits (320), Expect = 2.0e-26
Identity = 65/74 (87.84%), Postives = 69/74 (93.24%), Query Frame = 1


Query: 62  EDVADVVADSIAQFVSSLPPTVRKTAEEPTPEHIQKVFDESGNSD-HHHHHDHGSHGIHG 121
           EDVADVVADSI+QF+SSLPPTVRKT EEPTPEHI +VFD+S NSD HHHHHDHGSHGIHG
Sbjct: 405 EDVADVVADSISQFISSLPPTVRKT-EEPTPEHIHEVFDQSMNSDHHHHHHDHGSHGIHG 464

Query: 122 AGYMDGYGLGSHAW 135
           AGYMDGYGLGS AW
Sbjct: 465 AGYMDGYGLGSQAW 477

[Close]

BLAST of Lsi06G001290 vs. NCBI nr
Match: gi|778662487|ref|XP_004135783.2| (PREDICTED: protein AUXIN RESPONSE 4 [Cucumis sativus])

HSP 1 Score: 120.6 bits (301), Expect = 3.1e-24
Identity = 62/73 (84.93%), Postives = 66/73 (90.41%), Query Frame = 1


Query: 62  EDVADVVADSIAQFVSSLPPTVRKTAEEPTPEHIQKVFDESGNSDHHHHHDHGSHGIHGA 121
           EDVADVVADSI+QF+SSLPPTVRKTAEEPTPEHI + FDES NSDHHHHH H SHGI  A
Sbjct: 405 EDVADVVADSISQFISSLPPTVRKTAEEPTPEHIHEAFDESMNSDHHHHHHH-SHGI-PA 464

Query: 122 GYMDGYGLGSHAW 135
           GYM+GYGLGSHAW
Sbjct: 465 GYMEGYGLGSHAW 475

[Close]

BLAST of Lsi06G001290 vs. NCBI nr
Match: gi|694403440|ref|XP_009376667.1| (PREDICTED: protein AUXIN RESPONSE 4-like [Pyrus x bretschneideri])

HSP 1 Score: 91.3 bits (225), Expect = 2.0e-15
Identity = 51/78 (65.38%), Postives = 56/78 (71.79%), Query Frame = 1


Query: 62  EDVADVVADSIAQFVSSLPPTVRKTAEEPTPEHIQKVFDESGNSDHHHHHDHGS----HG 121
           ED AD VA+ IA FVSSLP TVRK  EEP PEHIQK+ DE+ +SD HHHHDHG+    H 
Sbjct: 405 EDAADEVAEKIAYFVSSLPATVRKVEEEPIPEHIQKMLDEAKSSD-HHHHDHGNGHHHHH 464

Query: 122 IHGAGYMDGYGLG-SHAW 135
            HGAGY D YGLG  H W
Sbjct: 465 SHGAGYPDAYGLGHGHGW 481

[Close]

BLAST of Lsi06G001290 vs. NCBI nr
Match: gi|657957956|ref|XP_008370480.1| (PREDICTED: protein AUXIN RESPONSE 4 [Malus domestica])

HSP 1 Score: 89.7 bits (221), Expect = 5.9e-15
Identity = 49/77 (63.64%), Postives = 53/77 (68.83%), Query Frame = 1


Query: 62  EDVADVVADSIAQFVSSLPPTVRKTAEEPTPEHIQKVFDESGNSDHHHHH---DHGSHGI 121
           ED AD VA+ IA FVSSLP TVRK  EEP PEHIQK+ DE+ +SDHHHHH    H  H  
Sbjct: 405 EDAADEVAEKIAYFVSSLPATVRKVEEEPIPEHIQKMLDEAKSSDHHHHHHGDGHEHHHS 464

Query: 122 HGAGYMDGYGLG-SHAW 135
           HGA Y D YGLG  H W
Sbjct: 465 HGASYPDAYGLGHGHGW 481

[Close]

BLAST of Lsi06G001290 vs. NCBI nr
Match: gi|1009117225|ref|XP_015875201.1| (PREDICTED: protein AUXIN RESPONSE 4 [Ziziphus jujuba])

HSP 1 Score: 89.4 bits (220), Expect = 7.7e-15
Identity = 52/89 (58.43%), Postives = 60/89 (67.42%), Query Frame = 1


Query: 62  EDVADVVADSIAQFVSSLPPTVRKTAEEPTPEHIQKVFDE---SGNSDHHHHHDHGSHG- 121
           ED AD +A+SI QFVSSLP +VRK  EEP PEHIQK+FDE   +G+ +HHHHH H  HG 
Sbjct: 405 EDAADELAESIVQFVSSLPASVRKVEEEPIPEHIQKMFDEAEKNGHHNHHHHHHHHHHGD 464

Query: 122 ----------IHG-AGYMDGYGLG-SHAW 135
                     +HG AGYMD YGLG  HAW
Sbjct: 465 AGRDHHHDGHVHGHAGYMDAYGLGQGHAW 493

The following BLAST results are available for this feature:

BLAST of Lsi06G001290 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AXR4_ARATH	1.1e-08	52.17	Protein AUXIN RESPONSE 4 OS=Arabidopsis thaliana GN=AXR4 PE=2 SV=1	[more]

BLAST of Lsi06G001290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M1J7_CUCSA	2.2e-24	84.93	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570060 PE=4 SV=1	[more]
A0A0C9S2L9_9SPER	2.4e-15	60.26	TSA: Wollemia nobilis Ref_Wollemi_Transcript_18909_2033 transcribed RNA sequence...	[more]
A0A0D6R2A2_ARACU	3.2e-15	58.23	Uncharacterized protein OS=Araucaria cunninghamii PE=4 SV=1	[more]
M5W4Y9_PRUPE	2.7e-14	59.49	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017101mg PE=4 S...	[more]
F6HZ08_VITVI	3.5e-14	56.96	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0128g00760 PE=4 SV=...	[more]

BLAST of Lsi06G001290 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54990.1	6.1e-10	52.17	alpha/beta-Hydrolases superfamily protein	[more]

BLAST of Lsi06G001290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659099535\|ref\|XP_008450650.1\|	2.0e-26	87.84	PREDICTED: protein AUXIN RESPONSE 4 [Cucumis melo]	[more]
gi\|778662487\|ref\|XP_004135783.2\|	3.1e-24	84.93	PREDICTED: protein AUXIN RESPONSE 4 [Cucumis sativus]	[more]
gi\|694403440\|ref\|XP_009376667.1\|	2.0e-15	65.38	PREDICTED: protein AUXIN RESPONSE 4-like [Pyrus x bretschneideri]	[more]
gi\|657957956\|ref\|XP_008370480.1\|	5.9e-15	63.64	PREDICTED: protein AUXIN RESPONSE 4 [Malus domestica]	[more]
gi\|1009117225\|ref\|XP_015875201.1\|	7.7e-15	58.43	PREDICTED: protein AUXIN RESPONSE 4 [Ziziphus jujuba]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009926	auxin polar transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0009733	response to auxin
biological_process	GO:0009612	response to mechanical stimulus
biological_process	GO:0050896	response to stimulus
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0016020	membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G001290.1	Lsi06G001290.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G001290	Csa1G570060	Cucumber (Chinese Long) v2	culsiB058
Lsi06G001290	CSPI01G26620	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G001290	Cucsa.182070	Cucumber (Gy14) v1	cgylsiB304
Lsi06G001290	CmaCh11G011310	Cucurbita maxima (Rimu)	cmalsiB146
Lsi06G001290	CmoCh11G011690	Cucurbita moschata (Rifu)	cmolsiB130
Lsi06G001290	Cla005232	Watermelon (97103) v1	lsiwmB396
Lsi06G001290	MELO3C015323	Melon (DHL92) v3.5.1	lsimeB396
Lsi06G001290	ClCG03G016980	Watermelon (Charleston Gray)	lsiwcgB364
Lsi06G001290	Cla97C03G067350	Watermelon (97103) v2	lsiwmbB365
Lsi06G001290	Bhi02G001739	Wax gourd	lsiwgoB528
Lsi06G001290	Cp4.1LG04g00590	Cucurbita pepo (Zucchini)	cpelsiB564
Lsi06G001290	Carg25036	Silver-seed gourd	carlsiB221
Lsi06G001290	CsaV3_1G038960	Cucumber (Chinese Long) v3	cuclsiB068

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G001290	Cucurbita maxima (Rimu)	cmalsiB076
Lsi06G001290	Cucurbita maxima (Rimu)	cmalsiB178
Lsi06G001290	Cucurbita maxima (Rimu)	cmalsiB734
Lsi06G001290	Cucurbita moschata (Rifu)	cmolsiB065
Lsi06G001290	Cucurbita moschata (Rifu)	cmolsiB168
Lsi06G001290	Cucurbita moschata (Rifu)	cmolsiB723
Lsi06G001290	Cucurbita pepo (Zucchini)	cpelsiB095
Lsi06G001290	Cucurbita pepo (Zucchini)	cpelsiB302
Lsi06G001290	Cucumber (Gy14) v2	cgyblsiB055
Lsi06G001290	Melon (DHL92) v3.6.1	lsimedB418
Lsi06G001290	Silver-seed gourd	carlsiB732