Lsi06G001220 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G001220
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionNucleic acid binding protein, putative
Locationchr06 : 1182292 .. 1192089 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTTCAATTTCTTTAGAAAAGAAGAAATTGGACAAAATTAGTATATTTTTAGGGTTTTTCTCTTATTTTCCAAAAAATATTTTTCAATGTCCAAAATCTCAGGGTGTTCTGATGATGGTGGGAGCTTCGTTTCTGATGGTGAGAAATTAGAGAATCAGTTCAGCCATGGAAGCTCTGTATCCCATCAACACCCTCAGCTAAAAGCTCCCAAGAAGAAAAGAAACTTGGCAGGAACACCAGGTAATTTTTAGTTTGAGGAAAATTAGAATTTAGTTCTTATAATTTGATAAAATCCTCGTAAATAGTCTCTGTTAGAAGAATTATTTAAGAGATTTTTATCAAATTACAGACTTAAATTCTAACCTATTTCAAATCATAGGACTGAATTTACAAATCTAACCTTTCATTTAGTAGAGTATTGATCAATATATGACCTGAATTGTTTAATTTATAACAAGAAACAATTTTGTTTTTAGTTTTTATTTTATGAAATCAAGATAGTTGGGAGGGTTTTTTATACCATTTAGAGTTGTTTTTGTAAAGTTCTCTGAATTTCTACTGGAAATTTTCTAGTACTCTTTTATTTAAAATTTGATATATTATTTTCTTTTTTCATATGATTCTTTTATGACGAACAAAAAAAATAGAGTATTACTGGAAATATTTTCGTCACTAAATTTATATTAATTAAGATTAGATCGATATATTTCAAAGATGTGATGTGATTTGAGATTGAAAATAGTATGAGAGATAGGAGAAAATTTTCATAATGGTGGGTTTGGACAAGAGACTTTATAATCGTTATTATTTATTATTTATTTTTTTAAATTTGAAATTTGAAATTTGGTTAGAATTTTAAAAATATTTTTGGAGGGTGGAATACAAAATAAAGACCAAAATTTAAATATCTGAGTAGTTGGAAGGAGTTCAATTATTGGAGGGGGATTACAATGATTGCTTTGTACTATTTGGACTTTTCCCATGTTCATCATCCTACTTTTTAATGATTTTTCCTTTTGTTTTCAAAAACAATAATTATAACATTATTAAAATATTCTAAATTTTTTTTAAAGAAAATTACTATAAACAAACAAAAAAAAAATAAAACTATTTATAAATATAAAATTTCTATAGAATTTTATTGTGCGATCTATGATAAATTTTTTTATATTTATAAATAGTTTAACTGATTTTTTTTATATTTGATAACAACTATTTTTTAATTTAATTTAATTTTTTTAAAAAAATAATTACTGTGTTACTTGTATGTCTTTCTATGAATTGATTGACCTAATAAGACATATTTATATTGTGCTATTAACACAAATTATCTCAAATACTTGTCTTAAACTTTGAAATGGTAGGGATATGAAAATTATTTTAAAATATTTTTGTAACTTCAACTATATTTTAAAGGAAAATTTTCACAGATAGAAAAAATGTCAAATTATTTACGAAAAAATAGTAAAAAAAAAACGTTGATAGACTTCTATCAACATCTATAAGTGATAGATTTCTATCATTTCTATTACTGATAGACTCTGATAGATGTTGTATCACAACTATTTAAAAATTTTATTATTTTGTGTAAACAGTTTCCTTTACTTTTCTATTTTTAAAAATTTTCGTATTTTAAGTGAGCCCATTATTTGGGGATAATACTTTTAATGGTCATATGATATTTAAATGAACGAAATATTTATTAAAGAAAACAATTTAATAGGAATAGTGAAAAATAAATTATATAAAATTTGAAGTATAATATATAACAATATTGCGGGTAGGTCAGAAAACTTGGCCAACCAAAGCTGACCAATTTAATTCAAACAGTATATGTTCAAGTCTTTTTTATAGCTATTTAATTTTTAAAAAAATTAATCTTAATTATAAATACTGATTGATCCACCCATAAATTTGTATGTTATGTTTTATTCAAAAAAAAATTATTATAAATGAAAAAAAATATTAAATTATTTACAAATATAGAAAAATTAGAAATCTATTGTAGTCTATAACTAATAAACATTGAGATTTTTCTATAGTTATAAATATTTTTGCTATTTTTTTATATTTGAAAACAATCATTTTATTTAATACTATTAATATTTTCAAATTTTTAATTTTCCAAAACTAAAAAAAAAATGTTAGTTTGAGAAATTTTTCATCATTAGAAATTGGTTGGGAATTCAAAAAAAATGGAAAATTCATAATTGAAAATTTTGAAACATAAATTTTAAAAATTAAAAACTAATAAAGAAATTGTTTATTTCCTTCTTACCAATATTTTCACCTTGTTGGTACATATTTCATATCTAATATTTGTGAGTAAATTTATTAATTTTTGTATGTTTGGTATTAAAAATATTGTTACTAACTAAAAAGAAAAAATAAAAGTAAACCTCAATGTAATAGTTTTGTGTATTTGTATGTGTGTATTTATTTTGTATTTCACTATGAGATTTGGGCAATAAAATATTTTTAGTCATGCAAAAACAGTAAGATTTAACCGTTTACGAACTTGTATATCTCTAAGGTCTCTCGTCTTTTTAATATGGAATCTTCACCCTGCTATGATGGTGACATTTTATGAATATCAACGTTTAAATTGTTGTATATATATACAGATCCAGATGCAGACGTGGTAGCGTTATCTCCAAAAACTCTCATGGCGACGAATCGATTCATATGTGAAATATGCAACAAGGGATTTCAAAGAGACCAAAATTTGCAACTGCACAGGCGAGGTCACAACCTACCATGGAAGTTGAAGCAAAGGACAAACGGGAGCGAGACGAGGAGGAGGGTGTACGTGTGCCCAGAACCGTCATGTGTACACCACGACCCGGCGAGGGCGCTCGGAGACCTCACCGGAATCAAGAAACATTTCAGCAGAAAGCATGGGGAGAAGAAGTGGAAATGTGAGAAATGCTCTAAAAAATATGCTGTTCAATCTGACTTGAAAGCTCATTCCAAAACATGTGGCTCCAAGGAATACAAATGTGACTGTGGCACAATCTTTTCCAGGTTAATATATATTTTACCTTCACCAAAGCATATATTAATACACATATACATACATAATATGAAGCTTTTATTACAAGTTTTTTATTTTATTTTTTGAAGCTTATAGTATCCAATCCCTAGAGGTGTTCGTAGGTTGGATTGGGTTGAGTTGACAGACTTTTTAGACCCGACCTAATTGTTCGGGTTGTAAATTTTTTCAACCCAAGTAACTCTTATATGAATCCAACCCGACCCAACTATGGAACATTTGGGTTGGGTTTGTTTGAGTTACTTGGGTCATTTATTTAAATTTTTATGCCAAAAAAAAGTAAAATGTTAATAGGTAAAAAATTTATTTAATCATTTTTATATAATGAATTATAATTAACAACTCAATTTCAATTTAAATTATGAAAATTTTCTTTCCAATGTACTAAATAATTGTTTTTAGGAGTAATTGGAAAAAAAATTATCTGAAAAAAATTAAATTAAATTAAACTAAAATAAATATATGTATCTATAATTTTATCATAAGTAAAAAAAAAATATACATTTTAAAATTAATAATAAGTTCAAGTTATTTTAGGTGGACCCATGAACCAACTCAACCCATAACATTTTCATTTATTTGAACCCAATCCAACCCAAATGAGTTGATAACTCAATCCAAACTATACAGGTTTGGTTGAGTTAGGTTGATCAGATTTTTCGGGTCATTGGGTTTTTTGAACACCCCTACTAATTCCTCCATCCTCTACTATCTTGTAAAATAAATAACTAACTTTCAATTTTTTAAAAATTCAATGATCTGCGAGTTGACACAAAATTAAATGTTTAGGGTTCCATCATACATAAAATTCAAATTTATATCTCTTAGATTAATTAAGTATTAAAACTTTCAAATTGAAAAAAGCACCTATTGTTGGGAAAAACCTCCATCATACATAAAATTCAAATTTATATCTCTTAGATTAATTAAGTATTAAAACTTTCAAATTGAAAAAAGCACCTATTGTTGGAAAAAACCTCTCACACTTCTACCTTAGGAATAAGCAGAAAAATAACATAAAATTTAAAAGAATGCAATAAAACTGGAAACGCAAGAATTAACATGGAAAAAAAAAACTCCAAACCGGAGAAATAAACTACAGTCTAGAAAAATCCACTATGTGAAAAGTTATTACAATCACATAGATATCTATCCCAATTACAAAATTATTTTCTCCCCCTCACTTGCGGGCTTGAAATACGAAGAAGAGCCAAGCAAGTGGAAATGAATATTAATTGGGAAGGAAACAACAATGCAGAGACTCTGATAGCATCTTAAATCGCCAATTGACCCAAAAGCTTAAGCTGATAGGTAAATATAAATTTAATATAATATCTAACAAAAATAAAAGGAAATTTAACTATAATTAGCACACCTAAGCTTAAAAGTATTTCTAACAGAGACAATTTGAAATTAAAGACATAAACTCTTTTTATAGTGTTTAGATCTCATCACTTTCTCCAATCTTTTTTATGTGAGGCAAGTACATTTTTAATATTTTGCCTATATATATTTATACATATGAACCATGTATTTAAAATTAAATGTAGTGCGTCAGATGTGATGTTTGAAAACAAATAAAGATTAAGATAAAATAAAATAAAAGTTAATGATGAAGTATATCGATAAGAACTAGAATAATTTTTTAATGCAAATTGAGAAGGTAAAATATTTTAAAGTTTTAACAATAAAATTGACTTATAAGCTTATTAGCATTGGTTAAGCTCCAGAAAATATTAAATCCAATTTAATTCAATGGGAATTTTCCTAACCTTATTGAGTTAAAAATATATGTCTTTCCTTAGTATATATTTGCTTATATTCACACATGCCAAAACTCTTTAATACATTTCATTTTAGAGAAATTACTATAAACAGAAAAAATATCAAATTATTTACGAATCTAGAAAAATTTTATTGTCTATCAGTGATAGATCGCGATAGAATTTTATCGCTTTCTATCGCTCAAGCAAATAAATTCTATCGCCTAAGCGATAGAATTCTATCGCGATCTATCAGTGATAGACCGTAAGTTTTTCTATATTTGTAAATAGTTTGGCTCATTTTTCTATATTTGAAAAGAGCCCTTCATTTTATTCCTAACCTCTTTCAATTTTTTTATAAATTAGCTATCTGTTTTTTTTTTTTTTAAATTAAGTCTATATGTACAACTCCCATCAATTAATTTTTATGTTTTGTTGTTTACATTTTAGGAGCGTTTTCAAAATCAAAGTCAAAATTCGAAAAAGAAAAAAAAAGAATTTTAAAAACTTGTTTTTGTATTTGAGAATTGACTAATAATTCAAATGTTTAGATAAAAAATATGAAAACTATGAGTAAGAAATTGTGAGAAAACAAGTCCAATTTTAAAAAGCTAAAAACCAAAAGTCAAAAGATTACCGGACAAAGCCTTAACCATTAGACTATACATCTTGGAACAAAAAAAAATGTAAGAATATTAAGAACAAATAAATCTATAAATTTAATCTTAAAAAGATTCGCTCAAAGTTCTTCAAGTTGTATTTAGGTTAAATTTCAAATTTGTTCTCTATAGTTTGGAGAAAGTTAGAATCTAGTACATATGGTTTATAATTAGAATTTATTCGGTTCGATAAAATCTTCATAAATTAGTTCATACGGAACTATTTATAAGAGTTTTATCAAACTATAGGCACAATTTATGAACTTTATCAAACCATAAGGACTAAATTCTAATTTTTAAAATTATAGGGATTAATTTTTTTTTTGTAAACTTTTTAAAAATTACAGAGACTAAAGTTCTAACTTTTACCCAATCATGGAGATTAAATTTATAATTTAACCTCGTATTTATAAAAAAATTACATTTATCTATTTTATTAGGTTCTTTTTTATTCGATATGTGACAATTAGATATTACAGTCCTTATTTAGTTTCATGCTTCCTATTAACTGTGAGAATTAATTGTGTCTCTTTTATATCATGTGTTATTAGATTGATATTGAACTTCTGATTTAGTCTTGTGAGTATGTGAAAAATAAGTTAATATATGGAGAATTTTTAAAAATAAAAAAATAAAGAAAATTATTTACACAAAATAGTAAAACTTTTAGAGAAATTAATCTAAACAAAAAAAATATCAAACTATTTACAAATATAGAAAAATTTTATTGTCTATTAGTGATAGACTGCGATAGAATTCTATCACTTCCTATAGCTCAAGCAAATAGAATTCTATCGCGGTCTATCGCTGATAGACTGTAATTTTTTTCTATATTTATAAATTGTTTGACTCATTTTTCTATATTTGAAAATCGCTCAAATTTTTAGATATTTTGTGATAGACACTGATAGAAGTGATAGAAATCTACCACGGATAGATGCTGATAGAAGTCTATCAATATTTATTAGTGTTTTTTTTGTGTAAATAGTTTGACAAACTTTCTCTGAAAAAATTTCTTTTAATATATTCTCAACAAAATTGGTCAAGATTGATTAGCATTTATAATATAAACATTAGTTAAATCCAATCCTCAAATATTCTTATTTTTTAATCTTGGAGGTCGAGAAACATCAATTAAACATAATTCTCGAAGATCCCTATATTAATTTGAAGCTTTCGAGATTATCAATTAATAGTGATTAACTAGGACGAAATTCATTAATTTAAATGTTTACAAAATTATTTCTTCGTCAACCCCACAACGATAAGTGCAACAAAAAAAAAGCCGAAAAATTGAAATATCAAAAAAAATTATTATAAACTGAAAAAATATCAAACTATTTATAGATATAGAAAAAGTTTACTGTCTATTAGCAATAGGACTACAATAGAATTATATCGCGTGAGCGATAGAAATCTATCCTTTTCTACCACTCAAGCGATAGAATTCTATCGCGGTCTATGCTGACAGTAAAATTTTTCTATATTTGTAAATAGTTTGACTCATTTTTCTATATTTGAAAATAGTCCAAATATTAAATTCTCTGATTTGATTTGATTTGATTTTTTAGTATAAAATTAGATATCTTCATTTATATTAGGAGAAAAAAAGATTATTGGTTTGATCGATTTTAATTTGAAAAACTAATCAAAATCGAATCAGATAGTTTATTTAATATCCTTAAAAATAAACTCTAACATTAGGTACTTTTAGTATATTTTTAATTATTATAGTTCGAGTATATTTCTTTGTTTAGAAAAAAAAAATTCATTATTATGGTGCAGGGATGTTATTTTGAGATAATATGTTAAGAATTTTTTTTTTTATGTATAATTTCAATCTAAAAAAAATAGGGTCAATTTTAGCTTGAAAATAGGGGAAAAACCAAGACAAAACGAAATAAAAATTAAAAAAAAATGGAAGAAAAAAAAGGCCAAAAACCGACAAACAACCGATAATAAACTGAATGAAATAAAACCAAAATCCATTCCTTTTGTACATCGGTTTGAATTCAATTTCTTCTCTATAAAACTGATTGGTTTAGTTTGATTCTTAGTTAGTTTTAAAATCGACGAAATCGAACCGACTTTTTTATCAACCTCATTCTTTAGGTTGCATTATCATAAACATCTCTTAAACTTTTTTTTTTTTTTCAGAAGAGATAGCTTTATCACCCACAGAGCATTTTGCGATGCCTTAACAGAAGAAAACAACAAATTACTATCTCATCAACTATCAACAACAATGGCTTCCACCGCCATTGATGTACCTTCCTTTCAACCTCATCTTCTTTCTCAACCCCCCGTCCTTTCACCGCCATTAACGCTGCCTCACGACCTTATGCCTATTCCTCCAAAGCCCTTAAACCTATCTGCTGGTTCCATGTTTTCATCCTCCATTTCCACCACCGACGGCCACCACTTTCCCTCCCCCTCCGCCCTCATGTCCGCCACCGCCTTGCTGCAAAAGGCGGCACAGATGGGAGCTGCCGTCAACAACGGTGGAAACTCCACTCCTTGTATGAACTCACCGATGATCCATGATAAGGTACTCTTCAACAATACTATTCTCAAACTCTAAAGTATGAGCAAATAGGTTAGTTGCTTTATAGGAGCAGATAGGTTAGTTGCTTTATAGGTTTGAATGCTATTTTAGTCTTGAAGTAATACTAATTACTTACTTATCATAATTAAGTAGGAGTTTTTAGTTACTTTTCAATATAACGTATTTTTTATTAAATAAAAAATTTTAAACTCTGATTGATTATTATTTGGATTTTGGTTTTTGGTTTTTAGTTTTTAGTTTATGAAAATTAAGCTTATAAATACTTCTTCTATTTGCTTTATTATCTACTTTCTATTAATTTTTTAAAAACCAAGCAACGTTTTGAAAACTAAAAAAAGTAGGCTCCGTTTTGTTTTTGGTTTTTGAAAATTAAGCTTATTTTCTCATATTTTCTTATAATGGTTTACACCTTTCTTGAATACAAGTATTGAATTCTTAGCCAAATTTCAAAAACAAAAACTACTTTTTTTAGTTTTCAAAATTTGGCTTGATTTTTTGAAAACATGATAAAAATTAGATAAGAAAACAAGACATTTAAGAGTGAGAGGAATGTTTTTAAAATCTTGTTTTTGAAATTTGGCTGAGAATTCAACTATTTTACTTTTAAAAAAAATGAAAACTATTGTAAAATAGTGGGAAGAAATAGACTTAATGTTCAAAAACTAGAAAATAAAAACTAAATGATTATCAAACGAGAAATTAGTAATTAAATCTACTTCTATTAATATAAATATATATGTCACATCTCAAAGTAAGTATACCAACTTCCTATTTACATGTATGTTTAGGCAGTTTTTAATTTTTTCCTATGTATTTTTAGCTTTTGTCTATTTTAATTAGGCTAAAATATATATACCTGAGACTAAATAAAAATTTAACTTACCTTAAAAGTATATGAATTAAGATAGAATTTAACTTTATTTGTCCATATTATTAAATGTTATTTTTAAATATAGAAAAATGAGTCAAACTATTTACAAATATAAAAAAAAAAATTTATTATTTATCGCTCAAGCGATAAAATTTCATTGTGGTCTATCGCTGATAGACATTAAAAAATTTCCATATTTATAAATAGTTTGATATTTTTTCCTATTATTAACATACTCCAGTTACTCGGAGAAAAAAAATAAAAATTAAATATATATCTCAAATCGTGTTTGAATTAAAAAAATTTAATTTTATATTTAATCATTTATTCATATTCTTGACAGAAGGGTTTCGTTACAACCATGGCTCCTTCTTCCTTCTGTGGGCTATTGACTACCAACTGTTTGCAAAAATGTCAAGAAGAAAACAGTTTGTCTCAGCTACCTTCCAAAGGCAAAGTTGTGGACATGGAGATGATCGACCACATCCCGATGTTGAATGGAGTGTTCGATCAACCGCTCGTGGAGGCGGCGAGGAAGACGATGACACTAGATTTGTTGGGGGCTGAGGGAGGAAAAGGGATGAAATTTCAAGCACAAGAAAGTATGGGGTTTGGAGGGCTTGTGGAGAATATGAGTTATTTTAGAAACCAAGGAGCCATGGGAAGGCAAATTTGGGAGATTTGATGGTTTGAGAGTGAAAGCAAAGGCCATGTGATTTAGGATATTTTATGTGGCTCTTCCTCCTTGTTAGAAAAATATAAGAAACATAAATTTTTCCTTTTCAAAATATGAATATATTTATATGCTCTTAAGAAAACCCAAAGTCATATAATAAAAAACATATAATATAATTATATATATGAATACACATCATTTAATTAAGT

mRNA sequence

AAATTTCAATTTCTTTAGAAAAGAAGAAATTGGACAAAATTAGTATATTTTTAGGGTTTTTCTCTTATTTTCCAAAAAATATTTTTCAATGTCCAAAATCTCAGGGTGTTCTGATGATGGTGGGAGCTTCGTTTCTGATGGTGAGAAATTAGAGAATCAGTTCAGCCATGGAAGCTCTGTATCCCATCAACACCCTCAGCTAAAAGCTCCCAAGAAGAAAAGAAACTTGGCAGGAACACCAGATCCAGATGCAGACGTGGTAGCGTTATCTCCAAAAACTCTCATGGCGACGAATCGATTCATATGTGAAATATGCAACAAGGGATTTCAAAGAGACCAAAATTTGCAACTGCACAGGCGAGGTCACAACCTACCATGGAAGTTGAAGCAAAGGACAAACGGGAGCGAGACGAGGAGGAGGGTGTACGTGTGCCCAGAACCGTCATGTGTACACCACGACCCGGCGAGGGCGCTCGGAGACCTCACCGGAATCAAGAAACATTTCAGCAGAAAGCATGGGGAGAAGAAGTGGAAATGTGAGAAATGCTCTAAAAAATATGCTGTTCAATCTGACTTGAAAGCTCATTCCAAAACATGTGGCTCCAAGGAATACAAATGTGACTGTGGCACAATCTTTTCCAGAAGAGATAGCTTTATCACCCACAGAGCATTTTGCGATGCCTTAACAGAAGAAAACAACAAATTACTATCTCATCAACTATCAACAACAATGGCTTCCACCGCCATTGATGTACCTTCCTTTCAACCTCATCTTCTTTCTCAACCCCCCGTCCTTTCACCGCCATTAACGCTGCCTCACGACCTTATGCCTATTCCTCCAAAGCCCTTAAACCTATCTGCTGGTTCCATGTTTTCATCCTCCATTTCCACCACCGACGGCCACCACTTTCCCTCCCCCTCCGCCCTCATGTCCGCCACCGCCTTGCTGCAAAAGGCGGCACAGATGGGAGCTGCCGTCAACAACGGTGGAAACTCCACTCCTTGTATGAACTCACCGATGATCCATGATAAGAAGGGTTTCGTTACAACCATGGCTCCTTCTTCCTTCTGTGGGCTATTGACTACCAACTGTTTGCAAAAATGTCAAGAAGAAAACAGTTTGTCTCAGCTACCTTCCAAAGGCAAAGTTGTGGACATGGAGATGATCGACCACATCCCGATGTTGAATGGAGTGTTCGATCAACCGCTCGTGGAGGCGGCGAGGAAGACGATGACACTAGATTTGTTGGGGGCTGAGGGAGGAAAAGGGATGAAATTTCAAGCACAAGAAAGTATGGGGTTTGGAGGGCTTGTGGAGAATATGAGTTATTTTAGAAACCAAGGAGCCATGGGAAGGCAAATTTGGGAGATTTGATGGTTTGAGAGTGAAAGCAAAGGCCATGTGATTTAGGATATTTTATGTGGCTCTTCCTCCTTGTTAGAAAAATATAAGAAACATAAATTTTTCCTTTTCAAAATATGAATATATTTATATGCTCTTAAGAAAACCCAAAGTCATATAATAAAAAACATATAATATAATTATATATATGAATACACATCATTTAATTAAGT

Coding sequence (CDS)

ATGTCCAAAATCTCAGGGTGTTCTGATGATGGTGGGAGCTTCGTTTCTGATGGTGAGAAATTAGAGAATCAGTTCAGCCATGGAAGCTCTGTATCCCATCAACACCCTCAGCTAAAAGCTCCCAAGAAGAAAAGAAACTTGGCAGGAACACCAGATCCAGATGCAGACGTGGTAGCGTTATCTCCAAAAACTCTCATGGCGACGAATCGATTCATATGTGAAATATGCAACAAGGGATTTCAAAGAGACCAAAATTTGCAACTGCACAGGCGAGGTCACAACCTACCATGGAAGTTGAAGCAAAGGACAAACGGGAGCGAGACGAGGAGGAGGGTGTACGTGTGCCCAGAACCGTCATGTGTACACCACGACCCGGCGAGGGCGCTCGGAGACCTCACCGGAATCAAGAAACATTTCAGCAGAAAGCATGGGGAGAAGAAGTGGAAATGTGAGAAATGCTCTAAAAAATATGCTGTTCAATCTGACTTGAAAGCTCATTCCAAAACATGTGGCTCCAAGGAATACAAATGTGACTGTGGCACAATCTTTTCCAGAAGAGATAGCTTTATCACCCACAGAGCATTTTGCGATGCCTTAACAGAAGAAAACAACAAATTACTATCTCATCAACTATCAACAACAATGGCTTCCACCGCCATTGATGTACCTTCCTTTCAACCTCATCTTCTTTCTCAACCCCCCGTCCTTTCACCGCCATTAACGCTGCCTCACGACCTTATGCCTATTCCTCCAAAGCCCTTAAACCTATCTGCTGGTTCCATGTTTTCATCCTCCATTTCCACCACCGACGGCCACCACTTTCCCTCCCCCTCCGCCCTCATGTCCGCCACCGCCTTGCTGCAAAAGGCGGCACAGATGGGAGCTGCCGTCAACAACGGTGGAAACTCCACTCCTTGTATGAACTCACCGATGATCCATGATAAGAAGGGTTTCGTTACAACCATGGCTCCTTCTTCCTTCTGTGGGCTATTGACTACCAACTGTTTGCAAAAATGTCAAGAAGAAAACAGTTTGTCTCAGCTACCTTCCAAAGGCAAAGTTGTGGACATGGAGATGATCGACCACATCCCGATGTTGAATGGAGTGTTCGATCAACCGCTCGTGGAGGCGGCGAGGAAGACGATGACACTAGATTTGTTGGGGGCTGAGGGAGGAAAAGGGATGAAATTTCAAGCACAAGAAAGTATGGGGTTTGGAGGGCTTGTGGAGAATATGAGTTATTTTAGAAACCAAGGAGCCATGGGAAGGCAAATTTGGGAGATTTGA

Protein sequence

MSKISGCSDDGGSFVSDGEKLENQFSHGSSVSHQHPQLKAPKKKRNLAGTPDPDADVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNGSETRRRVYVCPEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDLKAHSKTCGSKEYKCDCGTIFSRRDSFITHRAFCDALTEENNKLLSHQLSTTMASTAIDVPSFQPHLLSQPPVLSPPLTLPHDLMPIPPKPLNLSAGSMFSSSISTTDGHHFPSPSALMSATALLQKAAQMGAAVNNGGNSTPCMNSPMIHDKKGFVTTMAPSSFCGLLTTNCLQKCQEENSLSQLPSKGKVVDMEMIDHIPMLNGVFDQPLVEAARKTMTLDLLGAEGGKGMKFQAQESMGFGGLVENMSYFRNQGAMGRQIWEI
Homology
[Close]
BLAST of Lsi06G001220 vs. Swiss-Prot
Match: IDD7_ARATH (Protein indeterminate-domain 7 OS=Arabidopsis thaliana GN=IDD7 PE=2 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 9.8e-87
Identity = 179/321 (55.76%), Postives = 219/321 (68.22%), Query Frame = 1 

Query: 1   MSKISGCSDDGGSFVSDGEKLENQFSHGSSVSHQHPQL-----KAPKKKRNLAGTPDPDA 60
           MS ++  S D  S VS G + E     GS+++  H +       + K+KRN  G PDP+A
Sbjct: 21  MSNLTSASGDQAS-VSSGNRTETS---GSNINQHHQEQCFVPQSSLKRKRNQPGNPDPEA 80

Query: 61  DVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNGSETRRRVYVC 120
           +V+ALSPKTLMATNRFICE+CNKGFQRDQNLQLH+RGHNLPWKLKQR+N    R++VYVC
Sbjct: 81  EVMALSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVC 140

Query: 121 PEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDLKAHSKTCGSKEY 180
           PEP CVHH P+RALGDLTGIKKHF RKHGEKKWKCEKCSKKYAVQSD KAH+KTCG+KEY
Sbjct: 141 PEPGCVHHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTKEY 200

Query: 181 KCDCGTIFSRRDSFITHRAFCDALTEENNKLLSHQLSTTMASTA----------IDVPSF 240
           KCDCGT+FSRRDSFITHRAFCDAL EE+ + + + +    +++           I   S 
Sbjct: 201 KCDCGTLFSRRDSFITHRAFCDALAEESARAMPNPIMIQASNSPHHHHHQTQQNIGFSSS 260

Query: 241 QPHLLSQPPVLSPPL---------TLPHDLMPIPPKPLNLSAGSMFSSSIST--TDGHHF 296
             +++S   +  P            +P  L+   P P N + G++F    S+  T    F
Sbjct: 261 SQNIISNSNLHGPMKQEESQHHYQNIPPWLISSNPNP-NGNNGNLFPPVASSVNTGRSSF 320

[Close]
BLAST of Lsi06G001220 vs. Swiss-Prot
Match: IDD9_ARATH (Protein indeterminate-domain 9 OS=Arabidopsis thaliana GN=IDD9 PE=2 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.6e-81
Identity = 136/181 (75.14%), Postives = 159/181 (87.85%), Query Frame = 1 

Query: 42  KKKRNLAGTPDPDADVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQ 101
           K+KRNL G PDPDA+V+ALSP +LM TNRFICE+CNKGF+RDQNLQLHRRGHNLPWKLKQ
Sbjct: 39  KRKRNLPGNPDPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQ 98

Query: 102 RTNGSETRRRVYVCPEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQS 161
           RTN  + +++VY+CPE +CVHHDPARALGDLTGIKKHFSRKHGEKKWKC+KCSKKYAV S
Sbjct: 99  RTNKEQVKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMS 158

Query: 162 DLKAHSKTCGSKEYKCDCGTIFSRRDSFITHRAFCDALTEENNKLLSHQLSTTMASTAID 221
           D KAHSK CG+KEY+CDCGT+FSR+DSFITHRAFCDAL EE+ + +S   +    + A+D
Sbjct: 159 DWKAHSKICGTKEYRCDCGTLFSRKDSFITHRAFCDALAEESARFVSVPPAPAYLNNALD 218

Query: 222 V 223
           V
Sbjct: 219 V 219

[Close]
BLAST of Lsi06G001220 vs. Swiss-Prot
Match: IDD3_ARATH (Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.6e-81
Identity = 155/222 (69.82%), Postives = 173/222 (77.93%), Query Frame = 1 

Query: 34  QHPQLKAP--KKKRNLAGTPDPDADVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRR 93
           QH  L  P  KKKRNL G PDP+A+V+ALSPKTLMATNRF+CEIC KGFQRDQNLQLHRR
Sbjct: 31  QHESLNPPLVKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRR 90

Query: 94  GHNLPWKLKQRTNGSETRRRVYVCPEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCE 153
           GHNLPWKLKQRT+  E R+RVYVCPE SCVHH P RALGDLTGIKKHF RKHGEKKWKCE
Sbjct: 91  GHNLPWKLKQRTS-KEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCE 150

Query: 154 KCSKKYAVQSDLKAHSKTCGSKEYKCDCGTIFSRRDSFITHRAFCDALTEENNKLLSHQL 213
           KC+K+YAVQSD KAHSKTCG++EY+CDCGTIFSRRDSFITHRAFCDAL EE  +L +   
Sbjct: 151 KCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETARLNAASH 210

Query: 214 STTMASTAIDVPSFQPHLLSQPPVLSPPLTLPHDLMPIPPKP 254
             + A+TA    +   H L    + SP L  P      PP+P
Sbjct: 211 LKSFAATA--GSNLNYHYLMGTLIPSPSLPQPPSFPFGPPQP 249

[Close]
BLAST of Lsi06G001220 vs. Swiss-Prot
Match: IDD12_ARATH (Protein indeterminate-domain 12 OS=Arabidopsis thaliana GN=IDD12 PE=2 SV=2)

HSP 1 Score: 302.8 bits (774), Expect = 6.1e-81
Identity = 155/270 (57.41%), Postives = 195/270 (72.22%), Query Frame = 1 

Query: 35  HPQLKAPKKKRNLAGTPDPDADVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHN 94
           H +   PKKKR L G PDPDA+V+ALSPKTL+ATNRF+CEICNKGFQRDQNLQLHRRGHN
Sbjct: 46  HTETHKPKKKRGLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHN 105

Query: 95  LPWKLKQRTNGSETRRRVYVCPEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCS 154
           LPWKLKQ+    + +++VYVCPE +C HH P+RALGDLTGIKKHF RKHGEKKWKCEKCS
Sbjct: 106 LPWKLKQKNTKEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCS 165

Query: 155 KKYAVQSDLKAHSKTCGSKEYKCDCGTIFSRRDSFITHRAFCDALTEENNKLLSHQLSTT 214
           K YAVQSD KAH+K CG+++Y+CDCGT+FSR+D+FITHRAFCDAL EE+ +L     ST+
Sbjct: 166 KFYAVQSDWKAHTKICGTRDYRCDCGTLFSRKDTFITHRAFCDALAEESARL----HSTS 225

Query: 215 MASTAIDVPSFQPHLLSQPPVLSPPLTLPHDLMPIPPKPLNLSAGSMFSSSISTTDGHHF 274
            ++     P+FQ H      + +   +L     P+  +P      S+ ++++ST      
Sbjct: 226 SSNLTNPNPNFQGHHF----MFNKSSSLLFTSSPLFIEP------SLSTAALST------ 285

Query: 275 PSPSALMSATALLQKAAQMGAAVNNGGNST 305
             P+A +SATALLQKA  + +    GG  T
Sbjct: 286 -PPTAALSATALLQKATSLSSTTFGGGGQT 294

[Close]
BLAST of Lsi06G001220 vs. Swiss-Prot
Match: IDD11_ARATH (Protein indeterminate-domain 11 OS=Arabidopsis thaliana GN=IDD11 PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.4e-80
Identity = 161/284 (56.69%), Postives = 192/284 (67.61%), Query Frame = 1 

Query: 1   MSKISGCSDDGGSFVSDGEKLE----NQFSHGSSVSHQH------PQLKAPKKKRNLAGT 60
           MS ++  S D  S VS G   E    N F H      Q       P  +  KK+RN  G 
Sbjct: 20  MSNLTSASGDQAS-VSSGNITEASGSNYFPHHQQQQEQQQQQLVVPDSQTQKKRRNQPGN 79

Query: 61  PDPDADVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNGSETRR 120
           PDP+++V+ALSPKTLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQR+N    R+
Sbjct: 80  PDPESEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIRK 139

Query: 121 RVYVCPEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDLKAHSKTC 180
           +VYVCPE SCVHHDP+RALGDLTGIKKHF RKHGEKKWKC+KCSKKYAVQSD KAHSKTC
Sbjct: 140 KVYVCPEASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKTC 199

Query: 181 GSKEYKCDCGTIFSRRDSFITHRAFCDALTEENNKLLSHQLSTTMASTAIDVPSFQPHLL 240
           G+KEY+CDCGT+FSRRDSFITHRAFC+AL EE              +  + +P  Q +  
Sbjct: 200 GTKEYRCDCGTLFSRRDSFITHRAFCEALAEE-------------TAREVVIPQNQNNNQ 259

Query: 241 SQPPVLSPPLTLPHDLMPIPPKPLNLSAGSMFSSSISTTDGHHF 275
             P ++    + PH      P  +N+S+ S  S + +  +  HF
Sbjct: 260 PNPLLIHQSASHPHHHHQTQP-TINVSSSSSSSHNHNIINSLHF 288

[Close]
BLAST of Lsi06G001220 vs. TrEMBL
Match: A0A0A0LZ12_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569480 PE=4 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 5.8e-179
Identity = 345/445 (77.53%), Postives = 375/445 (84.27%), Query Frame = 1 

Query: 1   MSKISGCSDDGGSFVSDGEKLENQFSHGSSVSHQH---PQLKAPKKKRNLAGTPDPDADV 60
           MSKISGCSDDGGSFVSD EKLENQF +G+  SH     PQL  PKKKRNL GTP PDA+V
Sbjct: 1   MSKISGCSDDGGSFVSDAEKLENQFFNGTFESHHQQPQPQLVVPKKKRNLPGTPVPDAEV 60

Query: 61  VALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNGSETRRRVYVCPE 120
           VALSP+TLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRT+GSET+R+VYVCPE
Sbjct: 61  VALSPETLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSGSETKRKVYVCPE 120

Query: 121 PSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDLKAHSKTCGSKEYKC 180
           PSCVHHDP RALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDLKAH+K CGSKEYKC
Sbjct: 121 PSCVHHDPGRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDLKAHTKACGSKEYKC 180

Query: 181 DCGTIFSRRDSFITHRAFCDALTEENNKLL-SHQLSTTMA-STAIDVP-SFQ----PHLL 240
           DCGTIFSRRDSFITHRAFCDAL EE+NKL+ +HQ +TTMA STAI+ P SFQ    PHLL
Sbjct: 181 DCGTIFSRRDSFITHRAFCDALAEEHNKLVNAHQGATTMASSTAINGPNSFQPQPLPHLL 240

Query: 241 SQPPVLSPPL-TLPHDLMPIPPKPLNLSAGSMFSSSIST---------TDGHHFPSPSAL 300
           S+P +LS PL TLPHDLMPIPPKPLNLSAGSMFSSSIS           D H F S SAL
Sbjct: 241 SRPGILSLPLTTLPHDLMPIPPKPLNLSAGSMFSSSISNNSATPTTFQNDNHLFSSSSAL 300

Query: 301 MSATALLQKAAQMGAAVNNGGNS-TPCMNSPMIHDKKGFVTTMAPSSFCGLLTTNCLQKC 360
           MSATALLQKAAQMGAAV++GGNS TPC NSPMIH+KKGFVTTMAPSSFCGLL TNCLQ+C
Sbjct: 301 MSATALLQKAAQMGAAVSSGGNSGTPCFNSPMIHEKKGFVTTMAPSSFCGLLATNCLQRC 360

Query: 361 -QEENSLSQLPSKGKVVDMEMI-------DHIPMLNGVFDQP--LVEAARKTMTLDLLGA 413
            Q++N LSQLPSKGK +DMEM+       ++I M+NGVFDQ   LVEAARKT TLDLLG 
Sbjct: 361 PQDQNMLSQLPSKGKAMDMEMMIDDDNNNNNITMMNGVFDQRSLLVEAARKTTTLDLLGD 420

[Close]
BLAST of Lsi06G001220 vs. TrEMBL
Match: F6I4K8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g02440 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 7.0e-100
Identity = 249/554 (44.95%), Postives = 303/554 (54.69%), Query Frame = 1 

Query: 1   MSKISGCSDDGGSFVSD---GEKLENQ---------------FSHGSSVSHQHPQLKAPK 60
           MS I+  + DGGSF S    GE+++ Q                S+ S+ S    Q    K
Sbjct: 1   MSNIT--AGDGGSFSSGTNGGEEVQQQPVNNLHGLSSSVPSSTSNNSNGSISQQQPPPAK 60

Query: 61  KKRNLAGTPDPDADVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQR 120
           KKRNL G PDP A+V+ALSP TLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL+QR
Sbjct: 61  KKRNLPGNPDPSAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQR 120

Query: 121 TNGSETRRRVYVCPEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSD 180
           ++ +E R+RVYVCPEPSCVHH+PARALGDLTGIKKHF RKHGEKKWKC+KCSKKYAVQSD
Sbjct: 121 SS-TEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD 180

Query: 181 LKAHSKTCGSKEYKCDCGTIFSRRDSFITHRAFCDALTEENNKLLSHQLSTTMASTAIDV 240
            KAHSKTCG++EYKCDCGTIFSRRDSFITHRAFCDAL EEN K+ +  L+ TM    + +
Sbjct: 181 WKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENTKV-NQGLANTMRRN-LQI 240

Query: 241 PSFQPHLLSQPPVLSPP------------------LTLPHDLMPIPPKPLNLSAGSMFSS 300
                 LLS  P+ + P                   TLPH+ MP+PPKPLN++A  MF  
Sbjct: 241 QGQVSELLSSMPLNNNPNSTMGLSEFTHSDSKNHLKTLPHEPMPVPPKPLNMAAAGMF-- 300

Query: 301 SISTTDGHHF----------------------------------PSPSALMSATALLQKA 360
             STT G  F                                  P  S LMSATALLQKA
Sbjct: 301 --STTSGSLFGCPITASSPSSSSRLQLSTNSSSPSFENGQQLPPPPASTLMSATALLQKA 360

Query: 361 AQMGAAVNNGGNSTPCMNSPMIHDKKGFVTTMAPSSFCGLLTTNCLQKCQEENS------ 420
           AQMGA       ST   NSP     KGFVT+MAP+ F G+L    LQK    N       
Sbjct: 361 AQMGATA-----STKMNNSP----PKGFVTSMAPTPFGGIL----LQKNSSSNDHHLQAD 420

Query: 421 ----LSQLPSKGKVVDMEMIDHIPMLNGVFDQ--------------------------PL 428
               L+Q   +    + E++  + M +G+FDQ                          P 
Sbjct: 421 PTQFLNQFFYQNDGAESEVMSEMGMFSGLFDQNHGLFKNMEHHEHSNSNNILAAKTTNPG 480

[Close]
BLAST of Lsi06G001220 vs. TrEMBL
Match: I1JRB5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G236600 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 4.6e-99
Identity = 211/354 (59.60%), Postives = 250/354 (70.62%), Query Frame = 1 

Query: 42  KKKRNLAGTPDPDADVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQ 101
           KKKRNL G PDP A+V+ALSP TL+ATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLK 
Sbjct: 68  KKKRNLPGNPDPSAEVIALSPNTLVATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKL 127

Query: 102 RTNGSETRRRVYVCPEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQS 161
           RT  ++ R+RVYVCPEPSCVHH+PARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQS
Sbjct: 128 RTT-TDVRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQS 187

Query: 162 DLKAHSKTCGSKEYKCDCGTIFSRRDSFITHRAFCDALTEENNKLLSHQLSTTMASTAID 221
           D KAHSK CG+KEYKCDCGTIFSRRDSFITHRAFCDAL+EENNK    QL   M  + + 
Sbjct: 188 DWKAHSKICGTKEYKCDCGTIFSRRDSFITHRAFCDALSEENNKFNEGQL-PKMHGSNLQ 247

Query: 222 VPSFQPHLLSQPPVLSP-----PLTLPHDLM-PIPPKPLNLSAGSMFSSSISTTDGHHFP 281
            P+  P+L++  P+        PL+LPHDLM  IP KP N +  + F+ S+S+T      
Sbjct: 248 PPTIIPNLVASLPINGANNHKHPLSLPHDLMTTIPAKPFNNNMAAAFTRSLSSTSQLSSK 307

Query: 282 SP-----------SALMSATALLQKAAQMGAAVNNGGNSTPCMNSPMIHDKKGF--VTTM 341
           SP           S  MSATALLQKAA+MGA VN+  N+    NS M+  +K F  VT+M
Sbjct: 308 SPNINMFEENGLLSPHMSATALLQKAAEMGATVNSNSNN----NSMMMSGEKSFINVTSM 367

Query: 342 APSSFCGLLTTNCLQKCQEENSLSQLPSKGKVVDMEM----IDHIPMLNGVFDQ 373
           AP S+ G++  N +   Q++ S     + G VVD       +  + M N + DQ
Sbjct: 368 APPSY-GIMNPN-MHNGQQDLSQYNFIANG-VVDGGSNGMGMSGLDMFNAILDQ 412

[Close]
BLAST of Lsi06G001220 vs. TrEMBL
Match: A0A0B2P8N2_GLYSO (Zinc finger protein MAGPIE OS=Glycine soja GN=glysoja_022668 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 4.6e-99
Identity = 211/354 (59.60%), Postives = 250/354 (70.62%), Query Frame = 1 

Query: 42  KKKRNLAGTPDPDADVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQ 101
           KKKRNL G PDP A+V+ALSP TL+ATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLK 
Sbjct: 68  KKKRNLPGNPDPSAEVIALSPNTLVATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKL 127

Query: 102 RTNGSETRRRVYVCPEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQS 161
           RT  ++ R+RVYVCPEPSCVHH+PARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQS
Sbjct: 128 RTT-TDVRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQS 187

Query: 162 DLKAHSKTCGSKEYKCDCGTIFSRRDSFITHRAFCDALTEENNKLLSHQLSTTMASTAID 221
           D KAHSK CG+KEYKCDCGTIFSRRDSFITHRAFCDAL+EENNK    QL   M  + + 
Sbjct: 188 DWKAHSKICGTKEYKCDCGTIFSRRDSFITHRAFCDALSEENNKFNEGQL-PKMHGSNLQ 247

Query: 222 VPSFQPHLLSQPPVLSP-----PLTLPHDLM-PIPPKPLNLSAGSMFSSSISTTDGHHFP 281
            P+  P+L++  P+        PL+LPHDLM  IP KP N +  + F+ S+S+T      
Sbjct: 248 PPTIIPNLVASLPINGANNHKHPLSLPHDLMTTIPAKPFNNNMAAAFTRSLSSTSQLSSK 307

Query: 282 SP-----------SALMSATALLQKAAQMGAAVNNGGNSTPCMNSPMIHDKKGF--VTTM 341
           SP           S  MSATALLQKAA+MGA VN+  N+    NS M+  +K F  VT+M
Sbjct: 308 SPNINMFEENGLLSPHMSATALLQKAAEMGATVNSNSNN----NSMMMSGEKSFINVTSM 367

Query: 342 APSSFCGLLTTNCLQKCQEENSLSQLPSKGKVVDMEM----IDHIPMLNGVFDQ 373
           AP S+ G++  N +   Q++ S     + G VVD       +  + M N + DQ
Sbjct: 368 APPSY-GIMNPN-MHNGQQDLSQYNFIANG-VVDGGSNGMGMSGLDMFNAILDQ 412

[Close]
BLAST of Lsi06G001220 vs. TrEMBL
Match: B9H586_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s02730g PE=4 SV=2)

HSP 1 Score: 368.2 bits (944), Expect = 1.3e-98
Identity = 213/391 (54.48%), Postives = 257/391 (65.73%), Query Frame = 1 

Query: 26  SHGSSVSHQHPQLKAPKKKRNLAGTPDPDADVVALSPKTLMATNRFICEICNKGFQRDQN 85
           S+GS+++ Q  Q    KKKRN+ G PDP ADV+ALSPKTLMATNRF+CEICNKGFQRDQN
Sbjct: 36  SNGSTITQQLQQPPVLKKKRNMPGNPDPSADVIALSPKTLMATNRFVCEICNKGFQRDQN 95

Query: 86  LQLHRRGHNLPWKLKQRTNGSETRRRVYVCPEPSCVHHDPARALGDLTGIKKHFSRKHGE 145
           LQLHRRGHNLPWKLKQR +G E R+RVY+CPEPSCVHH+PARALGDLTGIKKHF RKHGE
Sbjct: 96  LQLHRRGHNLPWKLKQRASG-EIRKRVYICPEPSCVHHNPARALGDLTGIKKHFYRKHGE 155

Query: 146 KKWKCEKCSKKYAVQSDLKAHSKTCGSKEYKCDCGTIFSRRDSFITHRAFCDALTEENNK 205
           KKWKC+KCSKKYAVQSD KAH KTCG+KEYKCDCGTIFSRRDSFITHRAFCDAL EENNK
Sbjct: 156 KKWKCDKCSKKYAVQSDWKAHVKTCGTKEYKCDCGTIFSRRDSFITHRAFCDALAEENNK 215

Query: 206 L-----------LSHQLSTTMASTAI--DVPSFQPHLLSQPPVLSPP--LTLPHDLMPIP 265
           +           +  Q+S+ + S+    + P  Q  ++S    L     L+LP  LMP+P
Sbjct: 216 VNQGLMPNMEPNIQGQISSLIPSSMAINNNPPSQSAMMSNFSHLDTKNSLSLPQALMPMP 275

Query: 266 PKPLNLSAGSMFSSSISTT---------------------------DGHHFPSPSALMSA 325
           PKP   S+GSMFSSS ++                            +GHH  + SA MSA
Sbjct: 276 PKP---SSGSMFSSSTASLFGGSRSMPFNSSSALQLNANSSAIFEGNGHHNLAGSASMSA 335

Query: 326 TALLQKAAQMGAAVNNGGNSTPCMNSPMIHDKKGFVTTMAPSSFCGLLTTNCLQKC--QE 373
           TALLQKAAQMGA  +    S+P M       +K FVT+MAP +F  +   N        +
Sbjct: 336 TALLQKAAQMGATASGNNVSSPMM-------QKSFVTSMAPPTFGSMHAQNDQSHVIGGD 395

[Close]
BLAST of Lsi06G001220 vs. TAIR10
Match: AT1G55110.1 (AT1G55110.1 indeterminate(ID)-domain 7)

HSP 1 Score: 322.0 bits (824), Expect = 5.5e-88
Identity = 179/321 (55.76%), Postives = 219/321 (68.22%), Query Frame = 1 

Query: 1   MSKISGCSDDGGSFVSDGEKLENQFSHGSSVSHQHPQL-----KAPKKKRNLAGTPDPDA 60
           MS ++  S D  S VS G + E     GS+++  H +       + K+KRN  G PDP+A
Sbjct: 21  MSNLTSASGDQAS-VSSGNRTETS---GSNINQHHQEQCFVPQSSLKRKRNQPGNPDPEA 80

Query: 61  DVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNGSETRRRVYVC 120
           +V+ALSPKTLMATNRFICE+CNKGFQRDQNLQLH+RGHNLPWKLKQR+N    R++VYVC
Sbjct: 81  EVMALSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVC 140

Query: 121 PEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDLKAHSKTCGSKEY 180
           PEP CVHH P+RALGDLTGIKKHF RKHGEKKWKCEKCSKKYAVQSD KAH+KTCG+KEY
Sbjct: 141 PEPGCVHHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTKEY 200

Query: 181 KCDCGTIFSRRDSFITHRAFCDALTEENNKLLSHQLSTTMASTA----------IDVPSF 240
           KCDCGT+FSRRDSFITHRAFCDAL EE+ + + + +    +++           I   S 
Sbjct: 201 KCDCGTLFSRRDSFITHRAFCDALAEESARAMPNPIMIQASNSPHHHHHQTQQNIGFSSS 260

Query: 241 QPHLLSQPPVLSPPL---------TLPHDLMPIPPKPLNLSAGSMFSSSIST--TDGHHF 296
             +++S   +  P            +P  L+   P P N + G++F    S+  T    F
Sbjct: 261 SQNIISNSNLHGPMKQEESQHHYQNIPPWLISSNPNP-NGNNGNLFPPVASSVNTGRSSF 320

[Close]
BLAST of Lsi06G001220 vs. TAIR10
Match: AT1G03840.1 (AT1G03840.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 304.7 bits (779), Expect = 9.1e-83
Identity = 155/222 (69.82%), Postives = 173/222 (77.93%), Query Frame = 1 

Query: 34  QHPQLKAP--KKKRNLAGTPDPDADVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRR 93
           QH  L  P  KKKRNL G PDP+A+V+ALSPKTLMATNRF+CEIC KGFQRDQNLQLHRR
Sbjct: 31  QHESLNPPLVKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRR 90

Query: 94  GHNLPWKLKQRTNGSETRRRVYVCPEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCE 153
           GHNLPWKLKQRT+  E R+RVYVCPE SCVHH P RALGDLTGIKKHF RKHGEKKWKCE
Sbjct: 91  GHNLPWKLKQRTS-KEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCE 150

Query: 154 KCSKKYAVQSDLKAHSKTCGSKEYKCDCGTIFSRRDSFITHRAFCDALTEENNKLLSHQL 213
           KC+K+YAVQSD KAHSKTCG++EY+CDCGTIFSRRDSFITHRAFCDAL EE  +L +   
Sbjct: 151 KCAKRYAVQSDWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETARLNAASH 210

Query: 214 STTMASTAIDVPSFQPHLLSQPPVLSPPLTLPHDLMPIPPKP 254
             + A+TA    +   H L    + SP L  P      PP+P
Sbjct: 211 LKSFAATA--GSNLNYHYLMGTLIPSPSLPQPPSFPFGPPQP 249

[Close]
BLAST of Lsi06G001220 vs. TAIR10
Match: AT3G45260.1 (AT3G45260.1 C2H2-like zinc finger protein)

HSP 1 Score: 304.7 bits (779), Expect = 9.1e-83
Identity = 136/181 (75.14%), Postives = 159/181 (87.85%), Query Frame = 1 

Query: 42  KKKRNLAGTPDPDADVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQ 101
           K+KRNL G PDPDA+V+ALSP +LM TNRFICE+CNKGF+RDQNLQLHRRGHNLPWKLKQ
Sbjct: 39  KRKRNLPGNPDPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQ 98

Query: 102 RTNGSETRRRVYVCPEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQS 161
           RTN  + +++VY+CPE +CVHHDPARALGDLTGIKKHFSRKHGEKKWKC+KCSKKYAV S
Sbjct: 99  RTNKEQVKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMS 158

Query: 162 DLKAHSKTCGSKEYKCDCGTIFSRRDSFITHRAFCDALTEENNKLLSHQLSTTMASTAID 221
           D KAHSK CG+KEY+CDCGT+FSR+DSFITHRAFCDAL EE+ + +S   +    + A+D
Sbjct: 159 DWKAHSKICGTKEYRCDCGTLFSRKDSFITHRAFCDALAEESARFVSVPPAPAYLNNALD 218

Query: 222 V 223
           V
Sbjct: 219 V 219

[Close]
BLAST of Lsi06G001220 vs. TAIR10
Match: AT4G02670.1 (AT4G02670.1 indeterminate(ID)-domain 12)

HSP 1 Score: 302.8 bits (774), Expect = 3.5e-82
Identity = 155/270 (57.41%), Postives = 195/270 (72.22%), Query Frame = 1 

Query: 35  HPQLKAPKKKRNLAGTPDPDADVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHN 94
           H +   PKKKR L G PDPDA+V+ALSPKTL+ATNRF+CEICNKGFQRDQNLQLHRRGHN
Sbjct: 46  HTETHKPKKKRGLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHN 105

Query: 95  LPWKLKQRTNGSETRRRVYVCPEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCS 154
           LPWKLKQ+    + +++VYVCPE +C HH P+RALGDLTGIKKHF RKHGEKKWKCEKCS
Sbjct: 106 LPWKLKQKNTKEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCS 165

Query: 155 KKYAVQSDLKAHSKTCGSKEYKCDCGTIFSRRDSFITHRAFCDALTEENNKLLSHQLSTT 214
           K YAVQSD KAH+K CG+++Y+CDCGT+FSR+D+FITHRAFCDAL EE+ +L     ST+
Sbjct: 166 KFYAVQSDWKAHTKICGTRDYRCDCGTLFSRKDTFITHRAFCDALAEESARL----HSTS 225

Query: 215 MASTAIDVPSFQPHLLSQPPVLSPPLTLPHDLMPIPPKPLNLSAGSMFSSSISTTDGHHF 274
            ++     P+FQ H      + +   +L     P+  +P      S+ ++++ST      
Sbjct: 226 SSNLTNPNPNFQGHHF----MFNKSSSLLFTSSPLFIEP------SLSTAALST------ 285

Query: 275 PSPSALMSATALLQKAAQMGAAVNNGGNST 305
             P+A +SATALLQKA  + +    GG  T
Sbjct: 286 -PPTAALSATALLQKATSLSSTTFGGGGQT 294

[Close]
BLAST of Lsi06G001220 vs. TAIR10
Match: AT5G03150.1 (AT5G03150.1 C2H2-like zinc finger protein)

HSP 1 Score: 301.6 bits (771), Expect = 7.7e-82
Identity = 138/183 (75.41%), Postives = 158/183 (86.34%), Query Frame = 1 

Query: 36  PQLKAPKKKRNLAGTPDPDADVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNL 95
           P   + KKKRN  GTPDPDADV+ALSP TLMATNRF+CEICNKGFQRDQNLQLHRRGHNL
Sbjct: 47  PNSSSAKKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNL 106

Query: 96  PWKLKQRTNGSETRRRVYVCPEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSK 155
           PWKLKQR+     +++VY+CP  +CVHHD +RALGDLTGIKKH+SRKHGEKKWKCEKCSK
Sbjct: 107 PWKLKQRSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSK 166

Query: 156 KYAVQSDLKAHSKTCGSKEYKCDCGTIFSRRDSFITHRAFCDALTEENNKLLSHQLSTTM 215
           KYAVQSD KAH+KTCG++EYKCDCGT+FSR+DSFITHRAFCDALTEE  ++ S   +  +
Sbjct: 167 KYAVQSDWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARMSSLSNNNPV 226

Query: 216 AST 219
            ST
Sbjct: 227 IST 229

[Close]
BLAST of Lsi06G001220 vs. NCBI nr
Match: gi|449435665|ref|XP_004135615.1| (PREDICTED: protein indeterminate-domain 2 [Cucumis sativus])

HSP 1 Score: 635.2 bits (1637), Expect = 8.3e-179
Identity = 345/445 (77.53%), Postives = 375/445 (84.27%), Query Frame = 1 

Query: 1   MSKISGCSDDGGSFVSDGEKLENQFSHGSSVSHQH---PQLKAPKKKRNLAGTPDPDADV 60
           MSKISGCSDDGGSFVSD EKLENQF +G+  SH     PQL  PKKKRNL GTP PDA+V
Sbjct: 1   MSKISGCSDDGGSFVSDAEKLENQFFNGTFESHHQQPQPQLVVPKKKRNLPGTPVPDAEV 60

Query: 61  VALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNGSETRRRVYVCPE 120
           VALSP+TLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRT+GSET+R+VYVCPE
Sbjct: 61  VALSPETLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSGSETKRKVYVCPE 120

Query: 121 PSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDLKAHSKTCGSKEYKC 180
           PSCVHHDP RALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDLKAH+K CGSKEYKC
Sbjct: 121 PSCVHHDPGRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDLKAHTKACGSKEYKC 180

Query: 181 DCGTIFSRRDSFITHRAFCDALTEENNKLL-SHQLSTTMA-STAIDVP-SFQ----PHLL 240
           DCGTIFSRRDSFITHRAFCDAL EE+NKL+ +HQ +TTMA STAI+ P SFQ    PHLL
Sbjct: 181 DCGTIFSRRDSFITHRAFCDALAEEHNKLVNAHQGATTMASSTAINGPNSFQPQPLPHLL 240

Query: 241 SQPPVLSPPL-TLPHDLMPIPPKPLNLSAGSMFSSSIST---------TDGHHFPSPSAL 300
           S+P +LS PL TLPHDLMPIPPKPLNLSAGSMFSSSIS           D H F S SAL
Sbjct: 241 SRPGILSLPLTTLPHDLMPIPPKPLNLSAGSMFSSSISNNSATPTTFQNDNHLFSSSSAL 300

Query: 301 MSATALLQKAAQMGAAVNNGGNS-TPCMNSPMIHDKKGFVTTMAPSSFCGLLTTNCLQKC 360
           MSATALLQKAAQMGAAV++GGNS TPC NSPMIH+KKGFVTTMAPSSFCGLL TNCLQ+C
Sbjct: 301 MSATALLQKAAQMGAAVSSGGNSGTPCFNSPMIHEKKGFVTTMAPSSFCGLLATNCLQRC 360

Query: 361 -QEENSLSQLPSKGKVVDMEMI-------DHIPMLNGVFDQP--LVEAARKTMTLDLLGA 413
            Q++N LSQLPSKGK +DMEM+       ++I M+NGVFDQ   LVEAARKT TLDLLG 
Sbjct: 361 PQDQNMLSQLPSKGKAMDMEMMIDDDNNNNNITMMNGVFDQRSLLVEAARKTTTLDLLGD 420

[Close]
BLAST of Lsi06G001220 vs. NCBI nr
Match: gi|659099519|ref|XP_008450641.1| (PREDICTED: zinc finger protein MAGPIE-like [Cucumis melo])

HSP 1 Score: 632.1 bits (1629), Expect = 7.1e-178
Identity = 342/442 (77.38%), Postives = 369/442 (83.48%), Query Frame = 1 

Query: 1   MSKISGCSDDGGSFVSDGEKLENQFSHGSSVSH------QHPQLKAPKKKRNLAGTPDPD 60
           MSKISGCSDDGGSFVS+ EKLENQF +GS  SH      Q PQL  PKKKRNL GTP PD
Sbjct: 1   MSKISGCSDDGGSFVSEAEKLENQFINGSFESHHQQQQQQQPQLVVPKKKRNLPGTPVPD 60

Query: 61  ADVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNGSETRRRVYV 120
           A+VVALSP+TLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLKQRT+GSET+R+VYV
Sbjct: 61  AEVVALSPETLMATNRFMCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSGSETKRKVYV 120

Query: 121 CPEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDLKAHSKTCGSKE 180
           CPE SCVHHDP RALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDLKAH+K CGSKE
Sbjct: 121 CPEASCVHHDPGRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDLKAHTKACGSKE 180

Query: 181 YKCDCGTIFSRRDSFITHRAFCDALTEENNKLL-SHQLSTT-----MASTAI-DVPSFQP 240
           YKCDCGTIFSRRDSFITHRAFCDAL EE+NKLL +HQ STT      +STAI + PSFQP
Sbjct: 181 YKCDCGTIFSRRDSFITHRAFCDALAEEHNKLLIAHQGSTTTMAAAASSTAINNGPSFQP 240

Query: 241 ----HLLSQPPVLSPPL-TLPHDLMPIPPKPLNLSAGSMFSSSIST----------TDGH 300
               HLLS+P +L  PL TLPHDLMPIPPKPLNLSAGSMFSSSIS            D H
Sbjct: 241 QPLSHLLSRPSILPLPLTTLPHDLMPIPPKPLNLSAGSMFSSSISNNSTTTTTTFQNDNH 300

Query: 301 HFPSPSALMSATALLQKAAQMGAAVNNGGNST-PCMNSPMIHDKKGFVTTMAPSSFCGLL 360
            FPS SALMSATALLQKAAQMGAAV++GGNS+ PC NS MIH+KKGFVTTMAPSSFCGLL
Sbjct: 301 LFPSSSALMSATALLQKAAQMGAAVSSGGNSSAPCFNSSMIHEKKGFVTTMAPSSFCGLL 360

Query: 361 TTNCLQKCQEENSLSQLPSKGKVVDMEMI---DHIPMLNGVFDQP--LVEAARKTMTLDL 407
            TNCLQ+C +EN LSQLPSKGK ++MEM+   + IPM+NGVFDQP  LVEAARK MTLDL
Sbjct: 361 ATNCLQRCPQENMLSQLPSKGKAMEMEMMIVNNDIPMMNGVFDQPSSLVEAARKKMTLDL 420

[Close]
BLAST of Lsi06G001220 vs. NCBI nr
Match: gi|296089673|emb|CBI39492.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 381.3 bits (978), Expect = 2.2e-102
Identity = 248/532 (46.62%), Postives = 305/532 (57.33%), Query Frame = 1 

Query: 1   MSKISGCSDDGGSFVSD---GEKLENQ---------------FSHGSSVSHQHPQLKAPK 60
           MS I+  + DGGSF S    GE+++ Q                S+ S+ S    Q    K
Sbjct: 1   MSNIT--AGDGGSFSSGTNGGEEVQQQPVNNLHGLSSSVPSSTSNNSNGSISQQQPPPAK 60

Query: 61  KKRNLAGTPDPDADVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQR 120
           KKRNL G PDP A+V+ALSP TLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL+QR
Sbjct: 61  KKRNLPGNPDPSAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQR 120

Query: 121 TNGSETRRRVYVCPEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSD 180
           ++ +E R+RVYVCPEPSCVHH+PARALGDLTGIKKHF RKHGEKKWKC+KCSKKYAVQSD
Sbjct: 121 SS-TEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD 180

Query: 181 LKAHSKTCGSKEYKCDCGTIFSRRDSFITHRAFCDALTEENNKLLSHQLSTTMASTAIDV 240
            KAHSKTCG++EYKCDCGTIFSRRDSFITHRAFCDAL EEN K+ +  L+ TM    + +
Sbjct: 181 WKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENTKV-NQGLANTMRRN-LQI 240

Query: 241 PSFQPHLLSQPPVLSPP------------------LTLPHDLMPIPPKPLNLSAGSMFSS 300
                 LLS  P+ + P                   TLPH+ MP+PPKPLN++A  MFS+
Sbjct: 241 QGQVSELLSSMPLNNNPNSTMGLSEFTHSDSKNHLKTLPHEPMPVPPKPLNMAAAGMFST 300

Query: 301 ----------SISTTDGHHFPSP--SALMSATALLQKAAQMGAAVNNGGNSTPCMNSPMI 360
                     + S  +G   P P  S LMSATALLQKAAQMGA       ST   NSP  
Sbjct: 301 TSGSLFGCPITASFENGQQLPPPPASTLMSATALLQKAAQMGATA-----STKMNNSP-- 360

Query: 361 HDKKGFVTTMAPSSFCGLLTTNCLQKCQEENS----------LSQLPSKGKVVDMEMIDH 420
              KGFVT+MAP+ F G+L    LQK    N           L+Q   +    + E++  
Sbjct: 361 --PKGFVTSMAPTPFGGIL----LQKNSSSNDHHLQADPTQFLNQFFYQNDGAESEVMSE 420

Query: 421 IPMLNGVFDQ--------------------------PLVEAARK-----TMTLDLLGAEG 428
           + M +G+FDQ                          P + +  +     TMT+D LG  G
Sbjct: 421 MGMFSGLFDQNHGLFKNMEHHEHSNSNNILAAKTTNPGLSSTPRNGKTDTMTVDFLGIGG 480

[Close]
BLAST of Lsi06G001220 vs. NCBI nr
Match: gi|225450831|ref|XP_002284051.1| (PREDICTED: zinc finger protein NUTCRACKER [Vitis vinifera])

HSP 1 Score: 372.5 bits (955), Expect = 1.0e-99
Identity = 249/554 (44.95%), Postives = 303/554 (54.69%), Query Frame = 1 

Query: 1   MSKISGCSDDGGSFVSD---GEKLENQ---------------FSHGSSVSHQHPQLKAPK 60
           MS I+  + DGGSF S    GE+++ Q                S+ S+ S    Q    K
Sbjct: 1   MSNIT--AGDGGSFSSGTNGGEEVQQQPVNNLHGLSSSVPSSTSNNSNGSISQQQPPPAK 60

Query: 61  KKRNLAGTPDPDADVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQR 120
           KKRNL G PDP A+V+ALSP TLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL+QR
Sbjct: 61  KKRNLPGNPDPSAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQR 120

Query: 121 TNGSETRRRVYVCPEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSD 180
           ++ +E R+RVYVCPEPSCVHH+PARALGDLTGIKKHF RKHGEKKWKC+KCSKKYAVQSD
Sbjct: 121 SS-TEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD 180

Query: 181 LKAHSKTCGSKEYKCDCGTIFSRRDSFITHRAFCDALTEENNKLLSHQLSTTMASTAIDV 240
            KAHSKTCG++EYKCDCGTIFSRRDSFITHRAFCDAL EEN K+ +  L+ TM    + +
Sbjct: 181 WKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENTKV-NQGLANTMRRN-LQI 240

Query: 241 PSFQPHLLSQPPVLSPP------------------LTLPHDLMPIPPKPLNLSAGSMFSS 300
                 LLS  P+ + P                   TLPH+ MP+PPKPLN++A  MF  
Sbjct: 241 QGQVSELLSSMPLNNNPNSTMGLSEFTHSDSKNHLKTLPHEPMPVPPKPLNMAAAGMF-- 300

Query: 301 SISTTDGHHF----------------------------------PSPSALMSATALLQKA 360
             STT G  F                                  P  S LMSATALLQKA
Sbjct: 301 --STTSGSLFGCPITASSPSSSSRLQLSTNSSSPSFENGQQLPPPPASTLMSATALLQKA 360

Query: 361 AQMGAAVNNGGNSTPCMNSPMIHDKKGFVTTMAPSSFCGLLTTNCLQKCQEENS------ 420
           AQMGA       ST   NSP     KGFVT+MAP+ F G+L    LQK    N       
Sbjct: 361 AQMGATA-----STKMNNSP----PKGFVTSMAPTPFGGIL----LQKNSSSNDHHLQAD 420

Query: 421 ----LSQLPSKGKVVDMEMIDHIPMLNGVFDQ--------------------------PL 428
               L+Q   +    + E++  + M +G+FDQ                          P 
Sbjct: 421 PTQFLNQFFYQNDGAESEVMSEMGMFSGLFDQNHGLFKNMEHHEHSNSNNILAAKTTNPG 480

[Close]
BLAST of Lsi06G001220 vs. NCBI nr
Match: gi|356504036|ref|XP_003520805.1| (PREDICTED: protein indeterminate-domain 2-like [Glycine max])

HSP 1 Score: 369.8 bits (948), Expect = 6.5e-99
Identity = 211/354 (59.60%), Postives = 250/354 (70.62%), Query Frame = 1 

Query: 42  KKKRNLAGTPDPDADVVALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQ 101
           KKKRNL G PDP A+V+ALSP TL+ATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKLK 
Sbjct: 68  KKKRNLPGNPDPSAEVIALSPNTLVATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKL 127

Query: 102 RTNGSETRRRVYVCPEPSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQS 161
           RT  ++ R+RVYVCPEPSCVHH+PARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQS
Sbjct: 128 RTT-TDVRKRVYVCPEPSCVHHNPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQS 187

Query: 162 DLKAHSKTCGSKEYKCDCGTIFSRRDSFITHRAFCDALTEENNKLLSHQLSTTMASTAID 221
           D KAHSK CG+KEYKCDCGTIFSRRDSFITHRAFCDAL+EENNK    QL   M  + + 
Sbjct: 188 DWKAHSKICGTKEYKCDCGTIFSRRDSFITHRAFCDALSEENNKFNEGQL-PKMHGSNLQ 247

Query: 222 VPSFQPHLLSQPPVLSP-----PLTLPHDLM-PIPPKPLNLSAGSMFSSSISTTDGHHFP 281
            P+  P+L++  P+        PL+LPHDLM  IP KP N +  + F+ S+S+T      
Sbjct: 248 PPTIIPNLVASLPINGANNHKHPLSLPHDLMTTIPAKPFNNNMAAAFTRSLSSTSQLSSK 307

Query: 282 SP-----------SALMSATALLQKAAQMGAAVNNGGNSTPCMNSPMIHDKKGF--VTTM 341
           SP           S  MSATALLQKAA+MGA VN+  N+    NS M+  +K F  VT+M
Sbjct: 308 SPNINMFEENGLLSPHMSATALLQKAAEMGATVNSNSNN----NSMMMSGEKSFINVTSM 367

Query: 342 APSSFCGLLTTNCLQKCQEENSLSQLPSKGKVVDMEM----IDHIPMLNGVFDQ 373
           AP S+ G++  N +   Q++ S     + G VVD       +  + M N + DQ
Sbjct: 368 APPSY-GIMNPN-MHNGQQDLSQYNFIANG-VVDGGSNGMGMSGLDMFNAILDQ 412

The following BLAST results are available for this feature:
BLAST of Lsi06G001220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IDD7_ARATH9.8e-8755.76Protein indeterminate-domain 7 OS=Arabidopsis thaliana GN=IDD7 PE=2 SV=1[more]
IDD9_ARATH1.6e-8175.14Protein indeterminate-domain 9 OS=Arabidopsis thaliana GN=IDD9 PE=2 SV=1[more]
IDD3_ARATH1.6e-8169.82Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1[more]
IDD12_ARATH6.1e-8157.41Protein indeterminate-domain 12 OS=Arabidopsis thaliana GN=IDD12 PE=2 SV=2[more]
IDD11_ARATH1.4e-8056.69Protein indeterminate-domain 11 OS=Arabidopsis thaliana GN=IDD11 PE=2 SV=1[more]
BLAST of Lsi06G001220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LZ12_CUCSA5.8e-17977.53Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569480 PE=4 SV=1[more]
F6I4K8_VITVI7.0e-10044.95Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g02440 PE=4 SV=... [more]
I1JRB5_SOYBN4.6e-9959.60Uncharacterized protein OS=Glycine max GN=GLYMA_03G236600 PE=4 SV=1[more]
A0A0B2P8N2_GLYSO4.6e-9959.60Zinc finger protein MAGPIE OS=Glycine soja GN=glysoja_022668 PE=4 SV=1[more]
B9H586_POPTR1.3e-9854.48Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s02730g PE=4 SV=2[more]
BLAST of Lsi06G001220 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G55110.15.5e-8855.76 indeterminate(ID)-domain 7[more]
AT1G03840.19.1e-8369.82 C2H2 and C2HC zinc fingers superfamily protein[more]
AT3G45260.19.1e-8375.14 C2H2-like zinc finger protein[more]
AT4G02670.13.5e-8257.41 indeterminate(ID)-domain 12[more]
AT5G03150.17.7e-8275.41 C2H2-like zinc finger protein[more]
BLAST of Lsi06G001220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435665|ref|XP_004135615.1|8.3e-17977.53PREDICTED: protein indeterminate-domain 2 [Cucumis sativus][more]
gi|659099519|ref|XP_008450641.1|7.1e-17877.38PREDICTED: zinc finger protein MAGPIE-like [Cucumis melo][more]
gi|296089673|emb|CBI39492.3|2.2e-10246.62unnamed protein product [Vitis vinifera][more]
gi|225450831|ref|XP_002284051.1|1.0e-9944.95PREDICTED: zinc finger protein NUTCRACKER [Vitis vinifera][more]
gi|356504036|ref|XP_003520805.1|6.5e-9959.60PREDICTED: protein indeterminate-domain 2-like [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR022755Znf_C2H2_jaz
IPR015880Zinc finger, C2H2-like
IPR013087Znf_C2H2_type
IPR007087Zinc finger, C2H2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G001220.1Lsi06G001220.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 73..93
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 148..176
score: 8.58coord: 71..93
score: 10
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 70..93
score: 1.1E-5coord: 136..169
score: 9.
IPR015880Zinc finger, C2H2-likeSMARTSM00355c2h2final6coord: 113..143
score: 96.0coord: 148..168
score: 61.0coord: 71..93
score: 0
IPR022755Zinc finger, double-stranded RNA bindingPFAMPF12171zf-C2H2_jazcoord: 71..93
score: 5.
NoneNo IPR availablePANTHERPTHR10593SERINE/THREONINE-PROTEIN KINASE RIOcoord: 14..299
score: 3.3E
NoneNo IPR availablePANTHERPTHR10593:SF31C2H2-LIKE ZINC FINGER PROTEIN-RELATEDcoord: 14..299
score: 3.3E
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 143..168
score: 2.93E-8coord: 70..93
score: 2.9