Lsi06G001190 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi06G001190
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr06 : 1168832 .. 1170422 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGACATTCTTTTGGCAACCTACAGAATGAGAAACCATCTGCATTTTGGGTTCTGAATTACAAGGAGAAAGGGTAAGATGCGACTGGTCAGAAGTTAATAGTTTGTTAGATTCATCACATTGTATTTCCAATTTACTTGCTAAGTTCACAGTTGGCACAGAAGTAGAACTTGTTATCACATTAGCAGAAGAAGATTCCGAAGCATTTGAAAGGCGAACATTCGACAAATTGGAATCACCACAAGAATGGAATGATTCCTCATCATCAGACGAACAACATTTAACAGGAGTAACTTTATCCCCAGATGAGGAATGAGTTCCATCAGATACGCACTGTATTGATTTACTATCATCTTCCTCATGAACATACATCATTTCCTTGGTTGAAGAAACACTTACATTATCAAATTCAGAATCCAACATCTCTTGGTCCCTTTCCCCCTCTTTATGAACAGATAACTCCATTTCACTTACAGAAGTATGGGTCTGTTCTTCAACATCCATTCCAAGCATACCGAGATCGAATAGATCAAGGTCAGATTTTGGTCTTGCTGTCTTCTCTTCTCTTTCACTCTTAACAGAAAGCTTCTCCGTGGATTCCTCTCTCTGACTTTTGAACTTCTTGCAGACCCAAAAGGCAATAATAGAGCATATCAAAATGGTGACTCCTGCAGACACAAGAACTACAACAAGAATTTTTCTGACTCTTCCTTCTCTTGGATCTTTTCTTTTAGGTTTGTATACTGGTCGGCTCTTGTGCAAGCGAAGCTGATGAGGGTGGGAATGCTCATGAATGTGCACTCGATGAGCTGCCATGGGAACAGGAGAAGGAGCAAAGGCGGCTGGTGATGGAGATGGCGACGGTGACGGCGAAGGCGAAAGATCTGATGGGCTTTGATTTACTAATTGTAAGCTCTTGAGTCCAAGTAGAGCTCTGACTCTCTCCAGAATGAAAGGTTCATTTCCTCCACTCTCATCTTCCCCTGAAACTCTCTCTAGCTCTTTAACATTGAAGCTCTCTGCTGTATTCAACAGTGAGTTAGCAATCAAAATGTGGGATTTCTGCGATGAGAAAGGCATCGAAATGAAGATAACAATCATGAAAACACACTTCACAACACAACCCATTTTCTCTTCAATCAAGATTCATCAAAACCCAAGTAAGAATTTCTTCCAAAAAAAAAAACTGTTCTTTTCACATCCTTGAACCTAATGTTGGGTAGTGCAGGAAGATTCGATTGCAGAGAGGAGGAAGAAGAAAGTCTTTAATGCTACTCCAAGGAACCTCTCTGAACATGGCAGTTGTTTGTATTTGGGTATGTAAATTGACCTCCCTTACTTTTCTTTTGATTTACTCTTTTTTTTTTCAGTCATTATCTCATAATCCTCATCTGATGAAGCACCATTAAATGCACTGTTTCTGCAAATCTTTTAAAAAAAATGTCTGTCCACTCAACTCAGACTCCATTCTGTTGTCTTGTTTTGTTTCTTCTGCTTTGTGTTAGAAAAAAGTTAAGCATGCTTTTTCTCTGCTAGTTGATCCGTGATTCAGAACTTTTTGGAGGTAATGATACATCAGATTTGCTTTAG

mRNA sequence

ATGGGACATTCTTTTGGCAACCTACAGAATGAGAAACCATCTGCATTTTGGGTTCTGAATTACAAGGAGAAAGGGCGAACATTCGACAAATTGGAATCACCACAAGAATGGAATGATTCCTCATCATCAGACGAACAACATTTAACAGGAAATCCAACATCTCTTGGTCCCTTTCCCCCTCTTTATGAACAGATAACTCCATTTCACTTACAGAAGTATGGGTCTGTTCTTCAACATCCATTCCAAGCATACCGAGATCGAATAGATCAAGGTCAGATTTTGGTTTGTATACTGGTCGGCTCTTGTGCAAGCGAAGCTGATGAGGGTGGGAATGCTCATGAATGTGCACTCGATGAGCTGCCATGGGAACAGGAGAAGGAGCAAAGGCGGCTGGTGATGGAGATGGCGACGGTGACGGCGAAGGCGAAAGATCTGATGGGCTTTGATTTACTAATTCTCTTTAACATTGAAGCTCTCTGCTGTATTCAACAGAAGATTCGATTGCAGAGAGGAGGAAGAAGAAAGTCTTTAATGCTACTCCAAGGAACCTCTCTGAACATGGCAGTTGTTTGTATTTGGTTGATCCGTGATTCAGAACTTTTTGGAGGTAATGATACATCAGATTTGCTTTAG

Coding sequence (CDS)

ATGGGACATTCTTTTGGCAACCTACAGAATGAGAAACCATCTGCATTTTGGGTTCTGAATTACAAGGAGAAAGGGCGAACATTCGACAAATTGGAATCACCACAAGAATGGAATGATTCCTCATCATCAGACGAACAACATTTAACAGGAAATCCAACATCTCTTGGTCCCTTTCCCCCTCTTTATGAACAGATAACTCCATTTCACTTACAGAAGTATGGGTCTGTTCTTCAACATCCATTCCAAGCATACCGAGATCGAATAGATCAAGGTCAGATTTTGGTTTGTATACTGGTCGGCTCTTGTGCAAGCGAAGCTGATGAGGGTGGGAATGCTCATGAATGTGCACTCGATGAGCTGCCATGGGAACAGGAGAAGGAGCAAAGGCGGCTGGTGATGGAGATGGCGACGGTGACGGCGAAGGCGAAAGATCTGATGGGCTTTGATTTACTAATTCTCTTTAACATTGAAGCTCTCTGCTGTATTCAACAGAAGATTCGATTGCAGAGAGGAGGAAGAAGAAAGTCTTTAATGCTACTCCAAGGAACCTCTCTGAACATGGCAGTTGTTTGTATTTGGTTGATCCGTGATTCAGAACTTTTTGGAGGTAATGATACATCAGATTTGCTTTAG

Protein sequence

MGHSFGNLQNEKPSAFWVLNYKEKGRTFDKLESPQEWNDSSSSDEQHLTGNPTSLGPFPPLYEQITPFHLQKYGSVLQHPFQAYRDRIDQGQILVCILVGSCASEADEGGNAHECALDELPWEQEKEQRRLVMEMATVTAKAKDLMGFDLLILFNIEALCCIQQKIRLQRGGRRKSLMLLQGTSLNMAVVCIWLIRDSELFGGNDTSDLL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G001190.1Lsi06G001190.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi06G001190Watermelon (97103) v2lsiwmbB365
Lsi06G001190Wax gourdlsiwgoB486
Lsi06G001190Wax gourdlsiwgoB507
Lsi06G001190Wax gourdlsiwgoB528
Lsi06G001190Bottle gourd (USVL1VR-Ls)lsilsiB060
Lsi06G001190Bottle gourd (USVL1VR-Ls)lsilsiB161
Lsi06G001190Cucumber (Gy14) v1cgylsiB101
Lsi06G001190Cucumber (Gy14) v1cgylsiB304
Lsi06G001190Cucurbita maxima (Rimu)cmalsiB076
Lsi06G001190Cucurbita maxima (Rimu)cmalsiB146
Lsi06G001190Cucurbita maxima (Rimu)cmalsiB178
Lsi06G001190Cucurbita maxima (Rimu)cmalsiB734
Lsi06G001190Cucurbita moschata (Rifu)cmolsiB062
Lsi06G001190Cucurbita moschata (Rifu)cmolsiB130
Lsi06G001190Cucurbita moschata (Rifu)cmolsiB168
Lsi06G001190Cucurbita moschata (Rifu)cmolsiB723
Lsi06G001190Cucurbita pepo (Zucchini)cpelsiB095
Lsi06G001190Cucurbita pepo (Zucchini)cpelsiB302
Lsi06G001190Cucurbita pepo (Zucchini)cpelsiB564
Lsi06G001190Cucurbita pepo (Zucchini)cpelsiB682
Lsi06G001190Wild cucumber (PI 183967)cpilsiB059
Lsi06G001190Wild cucumber (PI 183967)cpilsiB134
Lsi06G001190Cucumber (Chinese Long) v2culsiB136
Lsi06G001190Cucumber (Chinese Long) v2culsiB058
Lsi06G001190Melon (DHL92) v3.5.1lsimeB396
Lsi06G001190Melon (DHL92) v3.5.1lsimeB416
Lsi06G001190Watermelon (Charleston Gray)lsiwcgB359
Lsi06G001190Watermelon (Charleston Gray)lsiwcgB364
Lsi06G001190Watermelon (97103) v1lsiwmB396
Lsi06G001190Watermelon (97103) v1lsiwmB409
Lsi06G001190Cucumber (Gy14) v2cgyblsiB055
Lsi06G001190Melon (DHL92) v3.6.1lsimedB418
Lsi06G001190Silver-seed gourdcarlsiB221
Lsi06G001190Cucumber (Chinese Long) v3cuclsiB068