BLAST of Lsi06G000480 vs. Swiss-Prot
Match:
PPR83_ARATH (Putative pentatricopeptide repeat-containing protein At1g56570 OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1)
HSP 1 Score: 713.8 bits (1841), Expect = 1.6e-204
Identity = 350/604 (57.95%), Postives = 454/604 (75.17%), Query Frame = 1
Query: 1 MSVNKLASSTHFHPIPLIVRNSLQCMSNSTFQSN--PSFTPKGPSIWATNLIKSYFDKGL 60
MS+ KLA S F PIP VR+SL+ + Q+ P + PK I ATNLI SYF+KGL
Sbjct: 1 MSITKLARSNAFKPIPNFVRSSLRNAGVESSQNTEYPPYKPKKHHILATNLIVSYFEKGL 60
Query: 61 TKEACNLFDEMHERDVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQPNAFTMSSVLKA 120
+EA +LFDEM +RDVV WTAMI G+ S N+ +AW F EM++ PN FT+SSVLK+
Sbjct: 61 VEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKS 120
Query: 121 CKGMKALSCGALAHSLATKHGIDRSMYVQNALLDMYATSCATMDDALTVFNDIPLKTAVS 180
C+ MK L+ GAL H + K G++ S+YV NA+++MYAT TM+ A +F DI +K V+
Sbjct: 121 CRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVT 180
Query: 181 WTTLIAGLTHRGDGYSGLQAFRQMLLEDVEPNSFSFSIAVRACASIRSYSCGKQIHAAVT 240
WTTLI G TH GDG GL+ ++QMLLE+ E + +IAVRA ASI S + GKQIHA+V
Sbjct: 181 WTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVI 240
Query: 241 KYGLHCDVPVMNSILDMYCRCNYLCDAKRCFGEMTQKNLITWNTLIAGYERSDSSESLSL 300
K G ++PVMNSILD+YCRC YL +AK F EM K+LITWNTLI+ ERSDSSE+L +
Sbjct: 241 KRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLM 300
Query: 301 FFQMGSEGYEPNCFTLTSITAACANLAVLSCGQQVHGGIVRRGFDKSVALINALIDMYAK 360
F + S+G+ PNC+T TS+ AACAN+A L+CGQQ+HG I RRGF+K+V L NALIDMYAK
Sbjct: 301 FQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAK 360
Query: 361 CGNINDSHKLFCDMPE-RDLVSWTTMMIGYGAHGYGKEAVKLFDEMVRSGIQPDRIVFMA 420
CGNI DS ++F ++ + R+LVSWT+MMIGYG+HGYG EAV+LFD+MV SGI+PDRIVFMA
Sbjct: 361 CGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMA 420
Query: 421 VLSGCSHAGLVDKGLRYFRSMLEDYNLNPDQEIYGCVVDLLGRAGRVEEAFQLVENMPFE 480
VLS C HAGLV+KGL+YF M +Y +NPD++IY CVVDLLGRAG++ EA++LVE MPF+
Sbjct: 421 VLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFK 480
Query: 481 PDESVWGALLGACKAYELSNLRS-LAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKM 540
PDES WGA+LGACKA++ + L S LAA++V++ +P M GTY++LS IYAAEGKW +FA++
Sbjct: 481 PDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARV 540
Query: 541 RKLMKGMDNKKEVGKSWIEIRNEVYSFVVGDKVGPHIKWVHKVLELLIWHMKDYGDVTDL 600
RK+M+ M NKKE G SWI + N+V+SF V DK+ P+ V+ VL LLI ++ G V +L
Sbjct: 541 RKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPEL 600
BLAST of Lsi06G000480 vs. Swiss-Prot
Match:
PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 400.6 bits (1028), Expect = 3.1e-110
Identity = 209/579 (36.10%), Postives = 323/579 (55.79%), Query Frame = 1
Query: 57 GLTKEACNLFDEMHERDVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQPNAFTMSSVL 116
G EA +LF M ERD TW +M+ GF + +A F M + N ++ +SVL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 117 KACKGMKALSCGALAHSLATKHGIDRSMYVQNALLDMYATSCATMDDALTVFNDIPLKTA 176
AC G+ ++ G HSL K +Y+ +AL+DMY+ C ++DA VF+++ +
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYS-KCGNVNDAQRVFDEMGDRNV 219
Query: 177 VSWTTLIAGLTHRGDGYSGLQAFRQMLLEDVEPNSFSFSIAVRACASIRSYSCGKQIHAA 236
VSW +LI G L F+ ML VEP+ + + + ACAS+ + G+++H
Sbjct: 220 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 279
Query: 237 VTKYG-LHCDVPVMNSILDMYCRCNYLCDAKRCFG------------------------- 296
V K L D+ + N+ +DMY +C+ + +A+ F
Sbjct: 280 VVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 339
Query: 297 ------EMTQKNLITWNTLIAGY-ERSDSSESLSLFFQMGSEGYEPNCFTLTSITAACAN 356
+M ++N+++WN LIAGY + ++ E+LSLF + E P ++ +I ACA+
Sbjct: 340 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACAD 399
Query: 357 LAVLSCGQQVHGGIVRRGF------DKSVALINALIDMYAKCGNINDSHKLFCDMPERDL 416
LA L G Q H +++ GF + + + N+LIDMY KCG + + + +F M ERD
Sbjct: 400 LAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDC 459
Query: 417 VSWTTMMIGYGAHGYGKEAVKLFDEMVRSGIQPDRIVFMAVLSGCSHAGLVDKGLRYFRS 476
VSW M+IG+ +GYG EA++LF EM+ SG +PD I + VLS C HAG V++G YF S
Sbjct: 460 VSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSS 519
Query: 477 MLEDYNLNPDQEIYGCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYELSN 536
M D+ + P ++ Y C+VDLLGRAG +EEA ++E MP +PD +WG+LL ACK +
Sbjct: 520 MTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNIT 579
Query: 537 LRSLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIR 596
L A+++L+ P+ +G Y+LLSN+YA GKW + +RK M+ K+ G SWI+I+
Sbjct: 580 LGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQ 639
BLAST of Lsi06G000480 vs. Swiss-Prot
Match:
PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)
HSP 1 Score: 395.6 bits (1015), Expect = 9.9e-109
Identity = 198/546 (36.26%), Postives = 317/546 (58.06%), Query Frame = 1
Query: 48 NLIKSYFDKGLTKEACNLFDEMHERDVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQP 107
+L+ Y A +FDEM ERDV++W ++I G+ S + +VF +ML S I+
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294
Query: 108 NAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSMYVQNALLDMYATSCATMDDALTV 167
+ T+ SV C + +S G HS+ K R N LLDMY+ C +D A V
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS-KCGDLDSAKAV 354
Query: 168 FNDIPLKTAVSWTTLIAGLTHRGDGYSGLQAFRQMLLEDVEPNSFSFSIAVRACASIRSY 227
F ++ ++ VS+T++IAG G ++ F +M E + P+ ++ + + CA R
Sbjct: 355 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 414
Query: 228 SCGKQIHAAVTKYGLHCDVPVMNSILDMYCRCNYLCDAKRCFGEMTQKNLITWNTLIAGY 287
GK++H + + L D+ V N+++DMY +C + +A+ F EM K++I+WNT+I GY
Sbjct: 415 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 474
Query: 288 ERSD-SSESLSLF-FQMGSEGYEPNCFTLTSITAACANLAVLSCGQQVHGGIVRRGFDKS 347
++ ++E+LSLF + + + P+ T+ + ACA+L+ G+++HG I+R G+
Sbjct: 475 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD 534
Query: 348 VALINALIDMYAKCGNINDSHKLFCDMPERDLVSWTTMMIGYGAHGYGKEAVKLFDEMVR 407
+ N+L+DMYAKCG + +H LF D+ +DLVSWT M+ GYG HG+GKEA+ LF++M +
Sbjct: 535 RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ 594
Query: 408 SGIQPDRIVFMAVLSGCSHAGLVDKGLRYFRSMLEDYNLNPDQEIYGCVVDLLGRAGRVE 467
+GI+ D I F+++L CSH+GLVD+G R+F M + + P E Y C+VD+L R G +
Sbjct: 595 AGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLI 654
Query: 468 EAFQLVENMPFEPDESVWGALLGACKAYELSNLRSLAAQRVLDTRPNMAGTYLLLSNIYA 527
+A++ +ENMP PD ++WGALL C+ + L A++V + P G Y+L++NIYA
Sbjct: 655 KAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYA 714
Query: 528 AEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIRNEVYSFVVGDKVGPHIKWVHKVLELLIW 587
KW + ++RK + +K G SWIEI+ V FV GD P + + L +
Sbjct: 715 EAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRA 774
Query: 588 HMKDYG 592
M + G
Sbjct: 775 RMIEEG 779
BLAST of Lsi06G000480 vs. Swiss-Prot
Match:
PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 387.9 bits (995), Expect = 2.1e-106
Identity = 197/556 (35.43%), Postives = 319/556 (57.37%), Query Frame = 1
Query: 47 TNLIKSYFDKGLTKEACNLFDEMHERDVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQ 106
T L Y EA +FD M ERD+V+W ++ G++ A + M ++
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 107 PNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSMYVQNALLDMYATSCATMDDALT 166
P+ T+ SVL A ++ +S G H A + G D + + AL+DMYA C +++ A
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA-KCGSLETARQ 293
Query: 167 VFNDIPLKTAVSWTTLIAGLTHRGDGYSGLQAFRQMLLEDVEPNSFSFSIAVRACASIRS 226
+F+ + + VSW ++I + + F++ML E V+P S A+ ACA +
Sbjct: 294 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD 353
Query: 227 YSCGKQIHAAVTKYGLHCDVPVMNSILDMYCRCNYLCDAKRCFGEMTQKNLITWNTLIAG 286
G+ IH + GL +V V+NS++ MYC+C + A FG++ + L++WN +I G
Sbjct: 354 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 413
Query: 287 YERSDSS-ESLSLFFQMGSEGYEPNCFTLTSITAACANLAVLSCGQQVHGGIVRRGFDKS 346
+ ++ ++L+ F QM S +P+ FT S+ A A L++ + +HG ++R DK+
Sbjct: 414 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 473
Query: 347 VALINALIDMYAKCGNINDSHKLFCDMPERDLVSWTTMMIGYGAHGYGKEAVKLFDEMVR 406
V + AL+DMYAKCG I + +F M ER + +W M+ GYG HG+GK A++LF+EM +
Sbjct: 474 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK 533
Query: 407 SGIQPDRIVFMAVLSGCSHAGLVDKGLRYFRSMLEDYNLNPDQEIYGCVVDLLGRAGRVE 466
I+P+ + F++V+S CSH+GLV+ GL+ F M E+Y++ + YG +VDLLGRAGR+
Sbjct: 534 GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLN 593
Query: 467 EAFQLVENMPFEPDESVWGALLGACKAYELSNLRSLAAQRVLDTRPNMAGTYLLLSNIYA 526
EA+ + MP +P +V+GA+LGAC+ ++ N AA+R+ + P+ G ++LL+NIY
Sbjct: 594 EAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYR 653
Query: 527 AEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIRNEVYSFVVGDKVGPHIKWVHKVLELLIW 586
A W + ++R M +K G S +EI+NEV+SF G P K ++ LE LI
Sbjct: 654 AASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLIC 713
Query: 587 HMKDYGDVTDLDYIVG 602
H+K+ G V D + ++G
Sbjct: 714 HIKEAGYVPDTNLVLG 728
BLAST of Lsi06G000480 vs. Swiss-Prot
Match:
PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 385.2 bits (988), Expect = 1.3e-105
Identity = 190/554 (34.30%), Postives = 317/554 (57.22%), Query Frame = 1
Query: 47 TNLIKSYFDKGLTKEACNLFDEMHERDVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQ 106
T LI + G A +FD++ + W A+I G++ NH+ A ++ M + +
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 107 PNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSMYVQNALLDMYATSCATMDDALT 166
P++FT +LKAC G+ L G H+ + G D ++VQN L+ +YA C + A T
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYA-KCRRLGSART 176
Query: 167 VFNDIPL--KTAVSWTTLIAGLTHRGDGYSGLQAFRQMLLEDVEPNSFSFSIAVRACASI 226
VF +PL +T VSWT +++ G+ L+ F QM DV+P+ + + A +
Sbjct: 177 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 236
Query: 227 RSYSCGKQIHAAVTKYGLHCDVPVMNSILDMYCRCNYLCDAKRCFGEMTQKNLITWNTLI 286
+ G+ IHA+V K GL + ++ S+ MY +C + AK F +M NLI WN +I
Sbjct: 237 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 296
Query: 287 AGYERSD-SSESLSLFFQMGSEGYEPNCFTLTSITAACANLAVLSCGQQVHGGIVRRGFD 346
+GY ++ + E++ +F +M ++ P+ ++TS +ACA + L + ++ + R +
Sbjct: 297 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 356
Query: 347 KSVALINALIDMYAKCGNINDSHKLFCDMPERDLVSWTTMMIGYGAHGYGKEAVKLFDEM 406
V + +ALIDM+AKCG++ + +F +RD+V W+ M++GYG HG +EA+ L+ M
Sbjct: 357 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 416
Query: 407 VRSGIQPDRIVFMAVLSGCSHAGLVDKGLRYFRSMLEDYNLNPDQEIYGCVVDLLGRAGR 466
R G+ P+ + F+ +L C+H+G+V +G +F M D+ +NP Q+ Y CV+DLLGRAG
Sbjct: 417 ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGH 476
Query: 467 VEEAFQLVENMPFEPDESVWGALLGACKAYELSNLRSLAAQRVLDTRPNMAGTYLLLSNI 526
+++A+++++ MP +P +VWGALL ACK + L AAQ++ P+ G Y+ LSN+
Sbjct: 477 LDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNL 536
Query: 527 YAAEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIRNEVYSFVVGDKVGPHIKWVHKVLELL 586
YAA W A++R MK K+VG SW+E+R + +F VGDK P + + + +E +
Sbjct: 537 YAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWI 596
Query: 587 IWHMKDYGDVTDLD 598
+K+ G V + D
Sbjct: 597 ESRLKEGGFVANKD 608
BLAST of Lsi06G000480 vs. TrEMBL
Match:
A0A0A0LW37_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G555630 PE=4 SV=1)
HSP 1 Score: 1151.0 bits (2976), Expect = 0.0e+00
Identity = 551/606 (90.92%), Postives = 580/606 (95.71%), Query Frame = 1
Query: 1 MSVNKLASSTHFHPIPLIVRNSLQCMSNSTFQSNPSFTPKGPSIWATNLIKSYFDKGLTK 60
MSV+KLASS HFHPIPLIVRNSLQ +SNST QSNP FTP+GPS+WATNLIKSYFDKGLT+
Sbjct: 1 MSVDKLASSPHFHPIPLIVRNSLQWISNSTLQSNPPFTPEGPSVWATNLIKSYFDKGLTR 60
Query: 61 EACNLFDEMHERDVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQPNAFTMSSVLKACK 120
EACNLF+E+ ERDVVTWTAMIVGFTSCNHY QAWT+F EMLRSE+QPNAFTMSSVLKACK
Sbjct: 61 EACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACK 120
Query: 121 GMKALSCGALAHSLATKHGIDRSMYVQNALLDMYATSCATMDDALTVFNDIPLKTAVSWT 180
GMKALSCGALAHSLATKHGIDRS+YVQNALLDMYA SCATMDDAL+VFNDIPLKTAVSWT
Sbjct: 121 GMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSWT 180
Query: 181 TLIAGLTHRGDGYSGLQAFRQMLLEDVEPNSFSFSIAVRACASIRSYSCGKQIHAAVTKY 240
TLIAG THRGDGYSGL AFRQMLLEDV PNSFSFSIA RACASI SYSCGKQIHAAVTKY
Sbjct: 181 TLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKY 240
Query: 241 GLHCDVPVMNSILDMYCRCNYLCDAKRCFGEMTQKNLITWNTLIAGYERSDSSESLSLFF 300
GLHCD PVMNSILDMYCRCNYLCDAKRCFGE+T+KNLITWNTLIAGYERSDSSESLSLFF
Sbjct: 241 GLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFF 300
Query: 301 QMGSEGYEPNCFTLTSITAACANLAVLSCGQQVHGGIVRRGFDKSVALINALIDMYAKCG 360
QMGSEGY+PNCFT TSITAACANLAVLSCGQQVHGGIVRRGFDK+VALIN+LIDMYAKCG
Sbjct: 301 QMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCG 360
Query: 361 NINDSHKLFCDMPERDLVSWTTMMIGYGAHGYGKEAVKLFDEMVRSGIQPDRIVFMAVLS 420
+I+DSHKLFCDMP RDLVSWTTMMIGYGAHGYGKEAVKLFDEMV+SGIQPDRIVFM VL
Sbjct: 361 SISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLC 420
Query: 421 GCSHAGLVDKGLRYFRSMLEDYNLNPDQEIYGCVVDLLGRAGRVEEAFQLVENMPFEPDE 480
GCSHAGLVDKGL+YFRSMLEDYN+NPDQEIY CVVDLLGRAGRVEEAFQLVENMPFEPDE
Sbjct: 421 GCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDE 480
Query: 481 SVWGALLGACKAYELSNLRSLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLM 540
SVWGALLGACKAY+LSNL +LAAQRVLD RPNMAGTYLLLS IYAAEGKWGEFAKMRKLM
Sbjct: 481 SVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLM 540
Query: 541 KGMDNKKEVGKSWIEIRNEVYSFVVGDKVGPHIKWVHKVLELLIWHMKDYGDVTDLDYIV 600
KGM+ KKEVGKSWIEIRNEVYSFVVG K+GPHI+WVHKV+++LIWHMKD GDVTDLDYIV
Sbjct: 541 KGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIV 600
Query: 601 GYLEGT 607
YLEGT
Sbjct: 601 DYLEGT 606
BLAST of Lsi06G000480 vs. TrEMBL
Match:
F6I4U5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00870 PE=4 SV=1)
HSP 1 Score: 869.0 bits (2244), Expect = 3.4e-249
Identity = 414/604 (68.54%), Postives = 489/604 (80.96%), Query Frame = 1
Query: 1 MSVNKLASSTHFHPIPLIVRNSLQCMSNSTFQSNPSFTPKGPSIWATNLIKSYFDKGLTK 60
MS KL S+THFHPIPLIVRNS+Q + N T NP F PKGPS+ AT LIKSYF KGL
Sbjct: 1 MSTRKLLSTTHFHPIPLIVRNSIQLVQNCTTPPNPPFIPKGPSVLATTLIKSYFGKGLIG 60
Query: 61 EACNLFDEMHERDVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQPNAFTMSSVLKACK 120
EA LFDEM ERDVV WT MI G+TSCN++ AW VFCEM+ E+ PNAFT+SSVLKACK
Sbjct: 61 EARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACK 120
Query: 121 GMKALSCGALAHSLATKHGIDRSMYVQNALLDMYATSCATMDDALTVFNDIPLKTAVSWT 180
GMK LS G L H LA KHG+D +YV NAL+DMYAT C +MDDA VF I LK VSWT
Sbjct: 121 GMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWT 180
Query: 181 TLIAGLTHRGDGYSGLQAFRQMLLEDVEPNSFSFSIAVRACASIRSYSCGKQIHAAVTKY 240
TLIAG THR DGY GL+ FRQMLLE+VE N FSFSIAVRAC SI S++ G+Q+HAAVTK+
Sbjct: 181 TLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKH 240
Query: 241 GLHCDVPVMNSILDMYCRCNYLCDAKRCFGEMTQKNLITWNTLIAGYERSDSSESLSLFF 300
G ++PVMNSILDMYCRC+ +A R F EM Q++LITWNTLIAGYERS+ +ESL +F
Sbjct: 241 GFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSNPTESLYVFS 300
Query: 301 QMGSEGYEPNCFTLTSITAACANLAVLSCGQQVHGGIVRRGFDKSVALINALIDMYAKCG 360
M SEG+ PNCFT TSI AACA LA L+CGQQ+HG I+RRG D ++AL NALIDMY+KCG
Sbjct: 301 MMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCG 360
Query: 361 NINDSHKLFCDMPERDLVSWTTMMIGYGAHGYGKEAVKLFDEMVRSGIQPDRIVFMAVLS 420
NI DSH++F M RDLVSWT MMIGYG HGYG+EAV+LFD+MVRSGI+PDR+VFMA+LS
Sbjct: 361 NIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILS 420
Query: 421 GCSHAGLVDKGLRYFRSMLEDYNLNPDQEIYGCVVDLLGRAGRVEEAFQLVENMPFEPDE 480
CSHAGLVD+GLRYF+ M+ DYN++PDQEIYGCVVDLLGRAG+VEEA++L+E+MPF+PDE
Sbjct: 421 ACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDE 480
Query: 481 SVWGALLGACKAYELSNLRSLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLM 540
VWG LGACKA+ NL LAA R+LD RP+MAGTY++LSNIYAA+GKWGEFA++RKLM
Sbjct: 481 CVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGEFARLRKLM 540
Query: 541 KGMDNKKEVGKSWIEIRNEVYSFVVGDKVGPHIKWVHKVLELLIWHMKDYGDVTDLDYIV 600
K M NKKE G+SW+E+ N VYSFVVGD+VG I+ +++VLE LI HMK+ G V DLD ++
Sbjct: 541 KRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLENLIGHMKESGYVPDLDCLI 600
Query: 601 GYLE 605
LE
Sbjct: 601 YDLE 604
BLAST of Lsi06G000480 vs. TrEMBL
Match:
A0A061F4Y1_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TCM_026792 PE=4 SV=1)
HSP 1 Score: 828.2 bits (2138), Expect = 6.6e-237
Identity = 401/588 (68.20%), Postives = 481/588 (81.80%), Query Frame = 1
Query: 18 IVRNSLQCM-SNSTFQSNP----SFTPKGPSIWATNLIKSYFDKGLTKEACNLFDEMHER 77
I NSLQ + S+ST+ P S KGP+I ATN+IKS+F+KGL +A LFDEM +R
Sbjct: 12 IKHNSLQWVQSHSTWTKIPYTNLSKGAKGPAILATNVIKSFFEKGLINDARVLFDEMPDR 71
Query: 78 DVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQPNAFTMSSVLKACKGMKALSCGALAH 137
DVV WTAMI G+TSC+H AWTVFCEM+ + ++PNAFT+SSVLKACK M+ L+CG L H
Sbjct: 72 DVVMWTAMIAGYTSCDHQVHAWTVFCEMVNNGVKPNAFTLSSVLKACKSMQCLACGGLVH 131
Query: 138 SLATKHGIDRSMYVQNALLDMYATSCATMDDALTVFNDIPLKTAVSWTTLIAGLTHRGDG 197
+A KHG++ S+YV NAL+DMYAT C +M+DA +VF D+ K V+WTTLI G THRGDG
Sbjct: 132 GVAVKHGLEGSLYVDNALMDMYATCCVSMEDACSVFRDMKEKNMVTWTTLITGYTHRGDG 191
Query: 198 YSGLQAFRQMLLEDVEPNSFSFSIAVRACASIRSYSCGKQIHAAVTKYGLHCDVPVMNSI 257
Y GLQ FR+MLLE+ E N SFSIAVRACA+I S++ G+QIHAA+ K GL ++PVMNSI
Sbjct: 192 YGGLQVFREMLLEEAELNPHSFSIAVRACATIGSHTFGRQIHAAIIKNGLGSNLPVMNSI 251
Query: 258 LDMYCRCNYLCDAKRCFGEMTQKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYEPNCF 317
LDMYCRC +L +A F EMT+KNLITWNTLIAGYER DS ESL++F QM SEG+ PN F
Sbjct: 252 LDMYCRCGFLSEANEYFREMTEKNLITWNTLIAGYERQDSKESLNVFSQMESEGFSPNSF 311
Query: 318 TLTSITAACANLAVLSCGQQVHGGIVRRGFDKSVALINALIDMYAKCGNINDSHKLFCDM 377
T TSITAACANLAVL+CGQQVHGGIVRRG ++ L NALIDMYAKCG+I DS K+F +M
Sbjct: 312 TFTSITAACANLAVLNCGQQVHGGIVRRGLQGNLVLANALIDMYAKCGSIADSRKIFSEM 371
Query: 378 PERDLVSWTTMMIGYGAHGYGKEAVKLFDEMVRSGIQPDRIVFMAVLSGCSHAGLVDKGL 437
ER+LVSWT+MMIGYGAHGYGK+AV+LFDEMVRSGI+PDRIVFMAVLS CSH GLVD+GL
Sbjct: 372 SERNLVSWTSMMIGYGAHGYGKQAVELFDEMVRSGIRPDRIVFMAVLSACSHVGLVDEGL 431
Query: 438 RYFRSMLEDYNLNPDQEIYGCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKA 497
R F SM +YN+ PDQEIYGCVVDLLGRAGRVEEA+QL+ +MPF+PDESVWGALLGACKA
Sbjct: 432 RCFESM-SNYNITPDQEIYGCVVDLLGRAGRVEEAYQLIGSMPFKPDESVWGALLGACKA 491
Query: 498 YELSNLRSLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLMKGMDNKKEVGKS 557
++L NL LAA +VLD RPN G Y++LSNIYAAEGKWGEFA+MRKLM+ ++KE G+S
Sbjct: 492 HKLPNLGKLAALKVLDLRPNKVGAYVMLSNIYAAEGKWGEFARMRKLMRRTGSRKEAGRS 551
Query: 558 WIEIRNEVYSFVVGDKVGPHIKWVHKVLELLIWHMKDYGDVTDLDYIV 601
WIE+RN+VYSFVVGDKVG +WV++VLELLI HMK+ G + DLD ++
Sbjct: 552 WIEVRNQVYSFVVGDKVGSRTEWVYEVLELLIVHMKEAGYMPDLDCLI 598
BLAST of Lsi06G000480 vs. TrEMBL
Match:
W9QSM5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018897 PE=4 SV=1)
HSP 1 Score: 819.7 bits (2116), Expect = 2.4e-234
Identity = 398/589 (67.57%), Postives = 476/589 (80.81%), Query Frame = 1
Query: 18 IVRNSLQCMSNSTFQSNPSFTPKGPSIWATNLIKSYFDKGLTKEACNLFDEMHERDVVTW 77
++RNSLQ N QSNP F PK PS+ ATNLIKSY +KGL KEA ++FDEM +DVV W
Sbjct: 1 MIRNSLQ---NRITQSNPPFLPKAPSVLATNLIKSYLEKGLVKEARSVFDEMPHKDVVAW 60
Query: 78 TAMIVGFTSCNHYPQAWTVFCEMLRSEIQPNAFTMSSVLKACKGMKALSCGALAHSLATK 137
TAM+ G+TSCN + AW +FC M+RSE+ PNAFT SSVLKAC+GMKAL CGA H K
Sbjct: 61 TAMVEGYTSCNDHGHAWLLFCAMVRSEVGPNAFTFSSVLKACRGMKALLCGASVHGSVVK 120
Query: 138 HGI--DRSMYVQNALLDMYATSCATMDDALTVFNDIPLKTAVSWTTLIAGLTHRGDGYSG 197
G+ + S+YV+NAL+DMYAT CA+MDDA VF D+ +K AVSWTTLI G THRGDGY G
Sbjct: 121 RGVTVEGSVYVENALMDMYATCCASMDDACRVFRDMFVKNAVSWTTLITGFTHRGDGYMG 180
Query: 198 LQAFRQMLLEDVEPNSFSFSIAVRACASIRSYSCGKQIHAAVTKYGLHCDVPVMNSILDM 257
L+ ED E N FSFSIAVRACASI S + G+QIHAAV K G ++ VMN++LDM
Sbjct: 181 LR-------EDAELNPFSFSIAVRACASISSRTFGRQIHAAVIKCGFESNLVVMNAVLDM 240
Query: 258 YCRCNYLCDAKRCFGEMTQKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYEPNCFTLT 317
YCR L +A +CF EMT+KNLITWNTLIAGY+R DSSE L LF QM S+G+ PNCFT +
Sbjct: 241 YCRYACLSEANQCFLEMTEKNLITWNTLIAGYQRMDSSECLHLFSQMESQGFRPNCFTFS 300
Query: 318 SITAACANLAVLSCGQQVHGGIVRRGFDKSVALINALIDMYAKCGNINDSHKLFCDMPER 377
++TA CANLA+L+CGQQVHGGI RRGF++++ + NALIDMYAKCGNI DSHK+F +M ++
Sbjct: 301 NVTAGCANLALLACGQQVHGGIFRRGFNQNLEVANALIDMYAKCGNIADSHKVFNEMSDK 360
Query: 378 DLVSWTTMMIGYGAHGYGKEAVKLFDEMVRSGIQPDRIVFMAVLSGCSHAGLVDKGLRYF 437
+LVSWT+MMIGYGAHG+GKEAV+LFDEMVR GI+PD+IVFMAVLS CSHAGLVD+GL+YF
Sbjct: 361 NLVSWTSMMIGYGAHGFGKEAVELFDEMVRLGIRPDQIVFMAVLSACSHAGLVDEGLKYF 420
Query: 438 RSMLEDYNLNPDQEIYGCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYEL 497
+SM+ YN++PDQEIYGCVVDLLGRAGRVEEA +L+ENMPF P ESVWGALLGACKA++L
Sbjct: 421 QSMMSTYNVSPDQEIYGCVVDLLGRAGRVEEACELIENMPFRPTESVWGALLGACKAHKL 480
Query: 498 SNLRSLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLMKGMDNKKEVGKSWIE 557
+L LAA +VLD RPN Y++LSNIYAAEGKWGEFAKMRKL+KGM NKKEVG+SWIE
Sbjct: 481 PHLGKLAALKVLDLRPNTVEAYVMLSNIYAAEGKWGEFAKMRKLIKGMGNKKEVGRSWIE 540
Query: 558 IRNEVYSFVVGDKVGPHIKWVHKVLELLIWHMKDYGDVTDLDYIVGYLE 605
+RN+VYSFVVGDK G H KWV+ V ELLI HMK+ V +LD ++ LE
Sbjct: 541 VRNQVYSFVVGDKKGSHTKWVYAVSELLILHMKEVKYVHNLDCLIYDLE 579
BLAST of Lsi06G000480 vs. TrEMBL
Match:
M5W7M0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026465mg PE=4 SV=1)
HSP 1 Score: 818.9 bits (2114), Expect = 4.0e-234
Identity = 387/558 (69.35%), Postives = 467/558 (83.69%), Query Frame = 1
Query: 40 KGPSIWATNLIKSYFDKGLTKEACNLFDEMHERDVVTWTAMIVGFTSCNHYPQAWTVFCE 99
KG + ATNLIKS F++GL KEA LFDEM ERDVV WTA+I G+TSC+H+ AW +FCE
Sbjct: 25 KGFCVIATNLIKSCFERGLIKEARKLFDEMPERDVVAWTAIIAGYTSCSHHSHAWALFCE 84
Query: 100 MLRSEIQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSMYVQNALLDMYATSCA 159
M+R+E++PNAFT SSVLKACKGMKALSCGAL H A K G+ S+YV+NAL+DMYAT CA
Sbjct: 85 MVRNEMEPNAFTFSSVLKACKGMKALSCGALVHGGAIKQGMQGSIYVENALMDMYATCCA 144
Query: 160 TMDDALTVFNDIPLKTAVSWTTLIAGLTHRGDGYSGLQAFRQMLLEDVEPNSFSFSIAVR 219
+MDDA VFNDI K VSWTTLI G THRG+GYSGLQ FRQMLLE E N FSFSIA+R
Sbjct: 145 SMDDACMVFNDIHEKNDVSWTTLITGFTHRGNGYSGLQVFRQMLLEGAELNPFSFSIAIR 204
Query: 220 ACASIRSYSCGKQIHAAVTKYGLHCDVPVMNSILDMYCRCNYLCDAKRCFGEMTQKNLIT 279
ACASI S++ GKQIH+AV K+G ++PVMNSILDMYCR L +A + F EM Q++LIT
Sbjct: 205 ACASIGSHTFGKQIHSAVIKHGFESNLPVMNSILDMYCRFGCLSEANQYFHEMPQRDLIT 264
Query: 280 WNTLIAGYERSDSSESLSLFFQMGSEGYEPNCFTLTSITAACANLAVLSCGQQVHGGIVR 339
WNTLI+GYER DS ESL +F M +EG+ PN FT S+ +ACANLAVL+ G+QVHG I+R
Sbjct: 265 WNTLISGYERFDSKESLLIFSHMDTEGFSPNSFTFCSVISACANLAVLNYGEQVHGRIIR 324
Query: 340 RGFDKSVALINALIDMYAKCGNINDSHKLFCDMPERDLVSWTTMMIGYGAHGYGKEAVKL 399
G +K++AL NAL+DMYAKCG+I D+HK+F M R+LVSWT+MMIGYGAHGYGKEAV+L
Sbjct: 325 GGLNKNLALANALVDMYAKCGSITDAHKIFSQMSHRNLVSWTSMMIGYGAHGYGKEAVEL 384
Query: 400 FDEMVRSGIQPDRIVFMAVLSGCSHAGLVDKGLRYFRSMLEDYNLNPDQEIYGCVVDLLG 459
FDEMV+SGI+PD+IVFMAVLS CSHAGLVD+GLRYF+SM+ DY + PDQ+IYGCVVDLLG
Sbjct: 385 FDEMVKSGIRPDQIVFMAVLSACSHAGLVDEGLRYFKSMINDYKITPDQDIYGCVVDLLG 444
Query: 460 RAGRVEEAFQLVENMPFEPDESVWGALLGACKAYELSNLRSLAAQRVLDTRPNMAGTYLL 519
RAGRVEEA++L+E+MPF+PDESVWGALLGACK +EL +L +AA+R+LD RPNM GTY++
Sbjct: 445 RAGRVEEAYELIESMPFKPDESVWGALLGACKEHELPHLGKVAARRMLDLRPNMVGTYVM 504
Query: 520 LSNIYAAEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIRNEVYSFVVGDKVGPHIKWVHKV 579
LSNIYAAEG+WGEFA RKLM+GM+NKKE G+SWIE+RN+VYSFVVGDKVG HIK V+ V
Sbjct: 505 LSNIYAAEGEWGEFANTRKLMRGMENKKEAGRSWIEVRNQVYSFVVGDKVGSHIKLVYGV 564
Query: 580 LELLIWHMKDYGDVTDLD 598
LE++I HMK+ + DL+
Sbjct: 565 LEVMILHMKEAEHINDLN 582
BLAST of Lsi06G000480 vs. TAIR10
Match:
AT1G56570.1 (AT1G56570.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 713.8 bits (1841), Expect = 9.2e-206
Identity = 350/604 (57.95%), Postives = 454/604 (75.17%), Query Frame = 1
Query: 1 MSVNKLASSTHFHPIPLIVRNSLQCMSNSTFQSN--PSFTPKGPSIWATNLIKSYFDKGL 60
MS+ KLA S F PIP VR+SL+ + Q+ P + PK I ATNLI SYF+KGL
Sbjct: 1 MSITKLARSNAFKPIPNFVRSSLRNAGVESSQNTEYPPYKPKKHHILATNLIVSYFEKGL 60
Query: 61 TKEACNLFDEMHERDVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQPNAFTMSSVLKA 120
+EA +LFDEM +RDVV WTAMI G+ S N+ +AW F EM++ PN FT+SSVLK+
Sbjct: 61 VEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKS 120
Query: 121 CKGMKALSCGALAHSLATKHGIDRSMYVQNALLDMYATSCATMDDALTVFNDIPLKTAVS 180
C+ MK L+ GAL H + K G++ S+YV NA+++MYAT TM+ A +F DI +K V+
Sbjct: 121 CRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVT 180
Query: 181 WTTLIAGLTHRGDGYSGLQAFRQMLLEDVEPNSFSFSIAVRACASIRSYSCGKQIHAAVT 240
WTTLI G TH GDG GL+ ++QMLLE+ E + +IAVRA ASI S + GKQIHA+V
Sbjct: 181 WTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVI 240
Query: 241 KYGLHCDVPVMNSILDMYCRCNYLCDAKRCFGEMTQKNLITWNTLIAGYERSDSSESLSL 300
K G ++PVMNSILD+YCRC YL +AK F EM K+LITWNTLI+ ERSDSSE+L +
Sbjct: 241 KRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLM 300
Query: 301 FFQMGSEGYEPNCFTLTSITAACANLAVLSCGQQVHGGIVRRGFDKSVALINALIDMYAK 360
F + S+G+ PNC+T TS+ AACAN+A L+CGQQ+HG I RRGF+K+V L NALIDMYAK
Sbjct: 301 FQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAK 360
Query: 361 CGNINDSHKLFCDMPE-RDLVSWTTMMIGYGAHGYGKEAVKLFDEMVRSGIQPDRIVFMA 420
CGNI DS ++F ++ + R+LVSWT+MMIGYG+HGYG EAV+LFD+MV SGI+PDRIVFMA
Sbjct: 361 CGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMA 420
Query: 421 VLSGCSHAGLVDKGLRYFRSMLEDYNLNPDQEIYGCVVDLLGRAGRVEEAFQLVENMPFE 480
VLS C HAGLV+KGL+YF M +Y +NPD++IY CVVDLLGRAG++ EA++LVE MPF+
Sbjct: 421 VLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFK 480
Query: 481 PDESVWGALLGACKAYELSNLRS-LAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKM 540
PDES WGA+LGACKA++ + L S LAA++V++ +P M GTY++LS IYAAEGKW +FA++
Sbjct: 481 PDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARV 540
Query: 541 RKLMKGMDNKKEVGKSWIEIRNEVYSFVVGDKVGPHIKWVHKVLELLIWHMKDYGDVTDL 600
RK+M+ M NKKE G SWI + N+V+SF V DK+ P+ V+ VL LLI ++ G V +L
Sbjct: 541 RKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPEL 600
BLAST of Lsi06G000480 vs. TAIR10
Match:
AT2G13600.1 (AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 400.6 bits (1028), Expect = 1.7e-111
Identity = 209/579 (36.10%), Postives = 323/579 (55.79%), Query Frame = 1
Query: 57 GLTKEACNLFDEMHERDVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQPNAFTMSSVL 116
G EA +LF M ERD TW +M+ GF + +A F M + N ++ +SVL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 117 KACKGMKALSCGALAHSLATKHGIDRSMYVQNALLDMYATSCATMDDALTVFNDIPLKTA 176
AC G+ ++ G HSL K +Y+ +AL+DMY+ C ++DA VF+++ +
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYS-KCGNVNDAQRVFDEMGDRNV 219
Query: 177 VSWTTLIAGLTHRGDGYSGLQAFRQMLLEDVEPNSFSFSIAVRACASIRSYSCGKQIHAA 236
VSW +LI G L F+ ML VEP+ + + + ACAS+ + G+++H
Sbjct: 220 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 279
Query: 237 VTKYG-LHCDVPVMNSILDMYCRCNYLCDAKRCFG------------------------- 296
V K L D+ + N+ +DMY +C+ + +A+ F
Sbjct: 280 VVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 339
Query: 297 ------EMTQKNLITWNTLIAGY-ERSDSSESLSLFFQMGSEGYEPNCFTLTSITAACAN 356
+M ++N+++WN LIAGY + ++ E+LSLF + E P ++ +I ACA+
Sbjct: 340 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACAD 399
Query: 357 LAVLSCGQQVHGGIVRRGF------DKSVALINALIDMYAKCGNINDSHKLFCDMPERDL 416
LA L G Q H +++ GF + + + N+LIDMY KCG + + + +F M ERD
Sbjct: 400 LAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDC 459
Query: 417 VSWTTMMIGYGAHGYGKEAVKLFDEMVRSGIQPDRIVFMAVLSGCSHAGLVDKGLRYFRS 476
VSW M+IG+ +GYG EA++LF EM+ SG +PD I + VLS C HAG V++G YF S
Sbjct: 460 VSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSS 519
Query: 477 MLEDYNLNPDQEIYGCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYELSN 536
M D+ + P ++ Y C+VDLLGRAG +EEA ++E MP +PD +WG+LL ACK +
Sbjct: 520 MTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNIT 579
Query: 537 LRSLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIR 596
L A+++L+ P+ +G Y+LLSN+YA GKW + +RK M+ K+ G SWI+I+
Sbjct: 580 LGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQ 639
BLAST of Lsi06G000480 vs. TAIR10
Match:
AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 395.6 bits (1015), Expect = 5.6e-110
Identity = 198/546 (36.26%), Postives = 317/546 (58.06%), Query Frame = 1
Query: 48 NLIKSYFDKGLTKEACNLFDEMHERDVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQP 107
+L+ Y A +FDEM ERDV++W ++I G+ S + +VF +ML S I+
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294
Query: 108 NAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSMYVQNALLDMYATSCATMDDALTV 167
+ T+ SV C + +S G HS+ K R N LLDMY+ C +D A V
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS-KCGDLDSAKAV 354
Query: 168 FNDIPLKTAVSWTTLIAGLTHRGDGYSGLQAFRQMLLEDVEPNSFSFSIAVRACASIRSY 227
F ++ ++ VS+T++IAG G ++ F +M E + P+ ++ + + CA R
Sbjct: 355 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 414
Query: 228 SCGKQIHAAVTKYGLHCDVPVMNSILDMYCRCNYLCDAKRCFGEMTQKNLITWNTLIAGY 287
GK++H + + L D+ V N+++DMY +C + +A+ F EM K++I+WNT+I GY
Sbjct: 415 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 474
Query: 288 ERSD-SSESLSLF-FQMGSEGYEPNCFTLTSITAACANLAVLSCGQQVHGGIVRRGFDKS 347
++ ++E+LSLF + + + P+ T+ + ACA+L+ G+++HG I+R G+
Sbjct: 475 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD 534
Query: 348 VALINALIDMYAKCGNINDSHKLFCDMPERDLVSWTTMMIGYGAHGYGKEAVKLFDEMVR 407
+ N+L+DMYAKCG + +H LF D+ +DLVSWT M+ GYG HG+GKEA+ LF++M +
Sbjct: 535 RHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ 594
Query: 408 SGIQPDRIVFMAVLSGCSHAGLVDKGLRYFRSMLEDYNLNPDQEIYGCVVDLLGRAGRVE 467
+GI+ D I F+++L CSH+GLVD+G R+F M + + P E Y C+VD+L R G +
Sbjct: 595 AGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLI 654
Query: 468 EAFQLVENMPFEPDESVWGALLGACKAYELSNLRSLAAQRVLDTRPNMAGTYLLLSNIYA 527
+A++ +ENMP PD ++WGALL C+ + L A++V + P G Y+L++NIYA
Sbjct: 655 KAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYA 714
Query: 528 AEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIRNEVYSFVVGDKVGPHIKWVHKVLELLIW 587
KW + ++RK + +K G SWIEI+ V FV GD P + + L +
Sbjct: 715 EAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRA 774
Query: 588 HMKDYG 592
M + G
Sbjct: 775 RMIEEG 779
BLAST of Lsi06G000480 vs. TAIR10
Match:
AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 387.9 bits (995), Expect = 1.2e-107
Identity = 197/556 (35.43%), Postives = 319/556 (57.37%), Query Frame = 1
Query: 47 TNLIKSYFDKGLTKEACNLFDEMHERDVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQ 106
T L Y EA +FD M ERD+V+W ++ G++ A + M ++
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 107 PNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSMYVQNALLDMYATSCATMDDALT 166
P+ T+ SVL A ++ +S G H A + G D + + AL+DMYA C +++ A
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA-KCGSLETARQ 293
Query: 167 VFNDIPLKTAVSWTTLIAGLTHRGDGYSGLQAFRQMLLEDVEPNSFSFSIAVRACASIRS 226
+F+ + + VSW ++I + + F++ML E V+P S A+ ACA +
Sbjct: 294 LFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGD 353
Query: 227 YSCGKQIHAAVTKYGLHCDVPVMNSILDMYCRCNYLCDAKRCFGEMTQKNLITWNTLIAG 286
G+ IH + GL +V V+NS++ MYC+C + A FG++ + L++WN +I G
Sbjct: 354 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 413
Query: 287 YERSDSS-ESLSLFFQMGSEGYEPNCFTLTSITAACANLAVLSCGQQVHGGIVRRGFDKS 346
+ ++ ++L+ F QM S +P+ FT S+ A A L++ + +HG ++R DK+
Sbjct: 414 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 473
Query: 347 VALINALIDMYAKCGNINDSHKLFCDMPERDLVSWTTMMIGYGAHGYGKEAVKLFDEMVR 406
V + AL+DMYAKCG I + +F M ER + +W M+ GYG HG+GK A++LF+EM +
Sbjct: 474 VFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK 533
Query: 407 SGIQPDRIVFMAVLSGCSHAGLVDKGLRYFRSMLEDYNLNPDQEIYGCVVDLLGRAGRVE 466
I+P+ + F++V+S CSH+GLV+ GL+ F M E+Y++ + YG +VDLLGRAGR+
Sbjct: 534 GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLN 593
Query: 467 EAFQLVENMPFEPDESVWGALLGACKAYELSNLRSLAAQRVLDTRPNMAGTYLLLSNIYA 526
EA+ + MP +P +V+GA+LGAC+ ++ N AA+R+ + P+ G ++LL+NIY
Sbjct: 594 EAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYR 653
Query: 527 AEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIRNEVYSFVVGDKVGPHIKWVHKVLELLIW 586
A W + ++R M +K G S +EI+NEV+SF G P K ++ LE LI
Sbjct: 654 AASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLIC 713
Query: 587 HMKDYGDVTDLDYIVG 602
H+K+ G V D + ++G
Sbjct: 714 HIKEAGYVPDTNLVLG 728
BLAST of Lsi06G000480 vs. TAIR10
Match:
AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)
HSP 1 Score: 385.2 bits (988), Expect = 7.5e-107
Identity = 190/554 (34.30%), Postives = 317/554 (57.22%), Query Frame = 1
Query: 47 TNLIKSYFDKGLTKEACNLFDEMHERDVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQ 106
T LI + G A +FD++ + W A+I G++ NH+ A ++ M + +
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 107 PNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSMYVQNALLDMYATSCATMDDALT 166
P++FT +LKAC G+ L G H+ + G D ++VQN L+ +YA C + A T
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYA-KCRRLGSART 176
Query: 167 VFNDIPL--KTAVSWTTLIAGLTHRGDGYSGLQAFRQMLLEDVEPNSFSFSIAVRACASI 226
VF +PL +T VSWT +++ G+ L+ F QM DV+P+ + + A +
Sbjct: 177 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 236
Query: 227 RSYSCGKQIHAAVTKYGLHCDVPVMNSILDMYCRCNYLCDAKRCFGEMTQKNLITWNTLI 286
+ G+ IHA+V K GL + ++ S+ MY +C + AK F +M NLI WN +I
Sbjct: 237 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 296
Query: 287 AGYERSD-SSESLSLFFQMGSEGYEPNCFTLTSITAACANLAVLSCGQQVHGGIVRRGFD 346
+GY ++ + E++ +F +M ++ P+ ++TS +ACA + L + ++ + R +
Sbjct: 297 SGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 356
Query: 347 KSVALINALIDMYAKCGNINDSHKLFCDMPERDLVSWTTMMIGYGAHGYGKEAVKLFDEM 406
V + +ALIDM+AKCG++ + +F +RD+V W+ M++GYG HG +EA+ L+ M
Sbjct: 357 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 416
Query: 407 VRSGIQPDRIVFMAVLSGCSHAGLVDKGLRYFRSMLEDYNLNPDQEIYGCVVDLLGRAGR 466
R G+ P+ + F+ +L C+H+G+V +G +F M D+ +NP Q+ Y CV+DLLGRAG
Sbjct: 417 ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGH 476
Query: 467 VEEAFQLVENMPFEPDESVWGALLGACKAYELSNLRSLAAQRVLDTRPNMAGTYLLLSNI 526
+++A+++++ MP +P +VWGALL ACK + L AAQ++ P+ G Y+ LSN+
Sbjct: 477 LDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNL 536
Query: 527 YAAEGKWGEFAKMRKLMKGMDNKKEVGKSWIEIRNEVYSFVVGDKVGPHIKWVHKVLELL 586
YAA W A++R MK K+VG SW+E+R + +F VGDK P + + + +E +
Sbjct: 537 YAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWI 596
Query: 587 IWHMKDYGDVTDLD 598
+K+ G V + D
Sbjct: 597 ESRLKEGGFVANKD 608
BLAST of Lsi06G000480 vs. NCBI nr
Match:
gi|778662137|ref|XP_011659402.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570 [Cucumis sativus])
HSP 1 Score: 1151.0 bits (2976), Expect = 0.0e+00
Identity = 551/606 (90.92%), Postives = 580/606 (95.71%), Query Frame = 1
Query: 1 MSVNKLASSTHFHPIPLIVRNSLQCMSNSTFQSNPSFTPKGPSIWATNLIKSYFDKGLTK 60
MSV+KLASS HFHPIPLIVRNSLQ +SNST QSNP FTP+GPS+WATNLIKSYFDKGLT+
Sbjct: 1 MSVDKLASSPHFHPIPLIVRNSLQWISNSTLQSNPPFTPEGPSVWATNLIKSYFDKGLTR 60
Query: 61 EACNLFDEMHERDVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQPNAFTMSSVLKACK 120
EACNLF+E+ ERDVVTWTAMIVGFTSCNHY QAWT+F EMLRSE+QPNAFTMSSVLKACK
Sbjct: 61 EACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACK 120
Query: 121 GMKALSCGALAHSLATKHGIDRSMYVQNALLDMYATSCATMDDALTVFNDIPLKTAVSWT 180
GMKALSCGALAHSLATKHGIDRS+YVQNALLDMYA SCATMDDAL+VFNDIPLKTAVSWT
Sbjct: 121 GMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSWT 180
Query: 181 TLIAGLTHRGDGYSGLQAFRQMLLEDVEPNSFSFSIAVRACASIRSYSCGKQIHAAVTKY 240
TLIAG THRGDGYSGL AFRQMLLEDV PNSFSFSIA RACASI SYSCGKQIHAAVTKY
Sbjct: 181 TLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKY 240
Query: 241 GLHCDVPVMNSILDMYCRCNYLCDAKRCFGEMTQKNLITWNTLIAGYERSDSSESLSLFF 300
GLHCD PVMNSILDMYCRCNYLCDAKRCFGE+T+KNLITWNTLIAGYERSDSSESLSLFF
Sbjct: 241 GLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERSDSSESLSLFF 300
Query: 301 QMGSEGYEPNCFTLTSITAACANLAVLSCGQQVHGGIVRRGFDKSVALINALIDMYAKCG 360
QMGSEGY+PNCFT TSITAACANLAVLSCGQQVHGGIVRRGFDK+VALIN+LIDMYAKCG
Sbjct: 301 QMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCG 360
Query: 361 NINDSHKLFCDMPERDLVSWTTMMIGYGAHGYGKEAVKLFDEMVRSGIQPDRIVFMAVLS 420
+I+DSHKLFCDMP RDLVSWTTMMIGYGAHGYGKEAVKLFDEMV+SGIQPDRIVFM VL
Sbjct: 361 SISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLC 420
Query: 421 GCSHAGLVDKGLRYFRSMLEDYNLNPDQEIYGCVVDLLGRAGRVEEAFQLVENMPFEPDE 480
GCSHAGLVDKGL+YFRSMLEDYN+NPDQEIY CVVDLLGRAGRVEEAFQLVENMPFEPDE
Sbjct: 421 GCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDE 480
Query: 481 SVWGALLGACKAYELSNLRSLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLM 540
SVWGALLGACKAY+LSNL +LAAQRVLD RPNMAGTYLLLS IYAAEGKWGEFAKMRKLM
Sbjct: 481 SVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKIYAAEGKWGEFAKMRKLM 540
Query: 541 KGMDNKKEVGKSWIEIRNEVYSFVVGDKVGPHIKWVHKVLELLIWHMKDYGDVTDLDYIV 600
KGM+ KKEVGKSWIEIRNEVYSFVVG K+GPHI+WVHKV+++LIWHMKD GDVTDLDYIV
Sbjct: 541 KGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVTDLDYIV 600
Query: 601 GYLEGT 607
YLEGT
Sbjct: 601 DYLEGT 606
BLAST of Lsi06G000480 vs. NCBI nr
Match:
gi|659099292|ref|XP_008450526.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570 [Cucumis melo])
HSP 1 Score: 1145.6 bits (2962), Expect = 0.0e+00
Identity = 550/606 (90.76%), Postives = 578/606 (95.38%), Query Frame = 1
Query: 1 MSVNKLASSTHFHPIPLIVRNSLQCMSNSTFQSNPSFTPKGPSIWATNLIKSYFDKGLTK 60
MSV+KLASS HFHPIPLIVRNSLQ +SNST QSNP FTPKGPS WATNLIKSYFDKGLT+
Sbjct: 1 MSVDKLASSPHFHPIPLIVRNSLQWISNSTLQSNPPFTPKGPSFWATNLIKSYFDKGLTR 60
Query: 61 EACNLFDEMHERDVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQPNAFTMSSVLKACK 120
EACNLF+E+ ERDVVTWTAMIVGFTSCNHYPQAWT+F EMLRSE+QPNAFTMSSVLKACK
Sbjct: 61 EACNLFNEIPERDVVTWTAMIVGFTSCNHYPQAWTMFSEMLRSEVQPNAFTMSSVLKACK 120
Query: 121 GMKALSCGALAHSLATKHGIDRSMYVQNALLDMYATSCATMDDALTVFNDIPLKTAVSWT 180
GMKALSCGALAHSLATK GIDRS+YVQNALLDMYA SCATMDDAL+VFNDIPLKTAVSWT
Sbjct: 121 GMKALSCGALAHSLATKLGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSWT 180
Query: 181 TLIAGLTHRGDGYSGLQAFRQMLLEDVEPNSFSFSIAVRACASIRSYSCGKQIHAAVTKY 240
TLIAGLTHRGDGYSGL AFR+MLLEDV PNSFSFSIA RACASI SYSCGKQIHAAVTKY
Sbjct: 181 TLIAGLTHRGDGYSGLLAFRKMLLEDVGPNSFSFSIAARACASISSYSCGKQIHAAVTKY 240
Query: 241 GLHCDVPVMNSILDMYCRCNYLCDAKRCFGEMTQKNLITWNTLIAGYERSDSSESLSLFF 300
GLHCD PVMNSILDMYCRCNYLCDAKRCF E+T+KNLITWNTLIAGYERSDSSESLSLFF
Sbjct: 241 GLHCDAPVMNSILDMYCRCNYLCDAKRCFDELTEKNLITWNTLIAGYERSDSSESLSLFF 300
Query: 301 QMGSEGYEPNCFTLTSITAACANLAVLSCGQQVHGGIVRRGFDKSVALINALIDMYAKCG 360
QMGSEGY+PNCFT TSITAACANLAVLSCGQQVHGGIVRRGFDK+VALIN+LIDMYAKCG
Sbjct: 301 QMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCG 360
Query: 361 NINDSHKLFCDMPERDLVSWTTMMIGYGAHGYGKEAVKLFDEMVRSGIQPDRIVFMAVLS 420
+INDSHKLFCDMP RDLVSWTTMMIGYG HGYGKEAVKLFDEMV+SGIQPDRIVFM VLS
Sbjct: 361 SINDSHKLFCDMPGRDLVSWTTMMIGYGTHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLS 420
Query: 421 GCSHAGLVDKGLRYFRSMLEDYNLNPDQEIYGCVVDLLGRAGRVEEAFQLVENMPFEPDE 480
GCSHAGLVD+GL+YFRSMLEDYN+NPDQEIY CVVDLLGRAGRVEEAFQLVENMPFEPDE
Sbjct: 421 GCSHAGLVDRGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDE 480
Query: 481 SVWGALLGACKAYELSNLRSLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLM 540
SVWGALLGACKA +LSNL +LAAQRVL TRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLM
Sbjct: 481 SVWGALLGACKACKLSNLGNLAAQRVLGTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLM 540
Query: 541 KGMDNKKEVGKSWIEIRNEVYSFVVGDKVGPHIKWVHKVLELLIWHMKDYGDVTDLDYIV 600
KGMD KKEVGKSWIEIRNEVYSFVVG K+GPHI+WVHKV+++LIWHMKD GDV DL+YIV
Sbjct: 541 KGMDKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVHKVIDVLIWHMKDDGDVADLNYIV 600
Query: 601 GYLEGT 607
YLEGT
Sbjct: 601 DYLEGT 606
BLAST of Lsi06G000480 vs. NCBI nr
Match:
gi|225450537|ref|XP_002277327.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570 isoform X2 [Vitis vinifera])
HSP 1 Score: 869.0 bits (2244), Expect = 4.9e-249
Identity = 414/604 (68.54%), Postives = 489/604 (80.96%), Query Frame = 1
Query: 1 MSVNKLASSTHFHPIPLIVRNSLQCMSNSTFQSNPSFTPKGPSIWATNLIKSYFDKGLTK 60
MS KL S+THFHPIPLIVRNS+Q + N T NP F PKGPS+ AT LIKSYF KGL
Sbjct: 1 MSTRKLLSTTHFHPIPLIVRNSIQLVQNCTTPPNPPFIPKGPSVLATTLIKSYFGKGLIG 60
Query: 61 EACNLFDEMHERDVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQPNAFTMSSVLKACK 120
EA LFDEM ERDVV WT MI G+TSCN++ AW VFCEM+ E+ PNAFT+SSVLKACK
Sbjct: 61 EARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACK 120
Query: 121 GMKALSCGALAHSLATKHGIDRSMYVQNALLDMYATSCATMDDALTVFNDIPLKTAVSWT 180
GMK LS G L H LA KHG+D +YV NAL+DMYAT C +MDDA VF I LK VSWT
Sbjct: 121 GMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWT 180
Query: 181 TLIAGLTHRGDGYSGLQAFRQMLLEDVEPNSFSFSIAVRACASIRSYSCGKQIHAAVTKY 240
TLIAG THR DGY GL+ FRQMLLE+VE N FSFSIAVRAC SI S++ G+Q+HAAVTK+
Sbjct: 181 TLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKH 240
Query: 241 GLHCDVPVMNSILDMYCRCNYLCDAKRCFGEMTQKNLITWNTLIAGYERSDSSESLSLFF 300
G ++PVMNSILDMYCRC+ +A R F EM Q++LITWNTLIAGYERS+ +ESL +F
Sbjct: 241 GFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSNPTESLYVFS 300
Query: 301 QMGSEGYEPNCFTLTSITAACANLAVLSCGQQVHGGIVRRGFDKSVALINALIDMYAKCG 360
M SEG+ PNCFT TSI AACA LA L+CGQQ+HG I+RRG D ++AL NALIDMY+KCG
Sbjct: 301 MMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCG 360
Query: 361 NINDSHKLFCDMPERDLVSWTTMMIGYGAHGYGKEAVKLFDEMVRSGIQPDRIVFMAVLS 420
NI DSH++F M RDLVSWT MMIGYG HGYG+EAV+LFD+MVRSGI+PDR+VFMA+LS
Sbjct: 361 NIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILS 420
Query: 421 GCSHAGLVDKGLRYFRSMLEDYNLNPDQEIYGCVVDLLGRAGRVEEAFQLVENMPFEPDE 480
CSHAGLVD+GLRYF+ M+ DYN++PDQEIYGCVVDLLGRAG+VEEA++L+E+MPF+PDE
Sbjct: 421 ACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDE 480
Query: 481 SVWGALLGACKAYELSNLRSLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLM 540
VWG LGACKA+ NL LAA R+LD RP+MAGTY++LSNIYAA+GKWGEFA++RKLM
Sbjct: 481 CVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGEFARLRKLM 540
Query: 541 KGMDNKKEVGKSWIEIRNEVYSFVVGDKVGPHIKWVHKVLELLIWHMKDYGDVTDLDYIV 600
K M NKKE G+SW+E+ N VYSFVVGD+VG I+ +++VLE LI HMK+ G V DLD ++
Sbjct: 541 KRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLENLIGHMKESGYVPDLDCLI 600
Query: 601 GYLE 605
LE
Sbjct: 601 YDLE 604
BLAST of Lsi06G000480 vs. NCBI nr
Match:
gi|731415919|ref|XP_010659715.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570 isoform X1 [Vitis vinifera])
HSP 1 Score: 864.4 bits (2232), Expect = 1.2e-247
Identity = 414/605 (68.43%), Postives = 489/605 (80.83%), Query Frame = 1
Query: 1 MSVNKLASSTHFHPIPLIVRNSLQCMSNSTFQSNPSFTPKGPSIWATNLIKSYFDKGLTK 60
MS KL S+THFHPIPLIVRNS+Q + N T NP F PKGPS+ AT LIKSYF KGL
Sbjct: 1 MSTRKLLSTTHFHPIPLIVRNSIQLVQNCTTPPNPPFIPKGPSVLATTLIKSYFGKGLIG 60
Query: 61 EACNLFDEMHERDVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQPNAFTMSSVLKACK 120
EA LFDEM ERDVV WT MI G+TSCN++ AW VFCEM+ E+ PNAFT+SSVLKACK
Sbjct: 61 EARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACK 120
Query: 121 GMKALSCGALAHSLATKHGIDRSMYVQNALLDMYATSCATMDDALTVFNDIPLKTAVSWT 180
GMK LS G L H LA KHG+D +YV NAL+DMYAT C +MDDA VF I LK VSWT
Sbjct: 121 GMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWT 180
Query: 181 TLIAGLTHRGDGYSGLQAFRQMLL-EDVEPNSFSFSIAVRACASIRSYSCGKQIHAAVTK 240
TLIAG THR DGY GL+ FRQMLL E+VE N FSFSIAVRAC SI S++ G+Q+HAAVTK
Sbjct: 181 TLIAGYTHRDDGYGGLRVFRQMLLQEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTK 240
Query: 241 YGLHCDVPVMNSILDMYCRCNYLCDAKRCFGEMTQKNLITWNTLIAGYERSDSSESLSLF 300
+G ++PVMNSILDMYCRC+ +A R F EM Q++LITWNTLIAGYERS+ +ESL +F
Sbjct: 241 HGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSNPTESLYVF 300
Query: 301 FQMGSEGYEPNCFTLTSITAACANLAVLSCGQQVHGGIVRRGFDKSVALINALIDMYAKC 360
M SEG+ PNCFT TSI AACA LA L+CGQQ+HG I+RRG D ++AL NALIDMY+KC
Sbjct: 301 SMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKC 360
Query: 361 GNINDSHKLFCDMPERDLVSWTTMMIGYGAHGYGKEAVKLFDEMVRSGIQPDRIVFMAVL 420
GNI DSH++F M RDLVSWT MMIGYG HGYG+EAV+LFD+MVRSGI+PDR+VFMA+L
Sbjct: 361 GNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAIL 420
Query: 421 SGCSHAGLVDKGLRYFRSMLEDYNLNPDQEIYGCVVDLLGRAGRVEEAFQLVENMPFEPD 480
S CSHAGLVD+GLRYF+ M+ DYN++PDQEIYGCVVDLLGRAG+VEEA++L+E+MPF+PD
Sbjct: 421 SACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPD 480
Query: 481 ESVWGALLGACKAYELSNLRSLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKL 540
E VWG LGACKA+ NL LAA R+LD RP+MAGTY++LSNIYAA+GKWGEFA++RKL
Sbjct: 481 ECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGEFARLRKL 540
Query: 541 MKGMDNKKEVGKSWIEIRNEVYSFVVGDKVGPHIKWVHKVLELLIWHMKDYGDVTDLDYI 600
MK M NKKE G+SW+E+ N VYSFVVGD+VG I+ +++VLE LI HMK+ G V DLD +
Sbjct: 541 MKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLENLIGHMKESGYVPDLDCL 600
Query: 601 VGYLE 605
+ LE
Sbjct: 601 IYDLE 605
BLAST of Lsi06G000480 vs. NCBI nr
Match:
gi|694419390|ref|XP_009337652.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At1g56570 [Pyrus x bretschneideri])
HSP 1 Score: 861.3 bits (2224), Expect = 1.0e-246
Identity = 405/588 (68.88%), Postives = 492/588 (83.67%), Query Frame = 1
Query: 10 THFHPIPLIVRNSLQCMSNSTFQSNPSFTPKGPSIWATNLIKSYFDKGLTKEACNLFDEM 69
T FHPIP I RNSLQ + + T QS P F+PK P+I ATNLIKS+FDKGL KEA +FDEM
Sbjct: 12 TLFHPIPPITRNSLQWVQDFTTQSTPPFSPKIPNILATNLIKSHFDKGLIKEARQVFDEM 71
Query: 70 HERDVVTWTAMIVGFTSCNHYPQAWTVFCEMLRSEIQPNAFTMSSVLKACKGMKALSCGA 129
ERDV+ WTAMI G+TSC+H+ AW +FCEM+R+ ++PNAFT SSVLKACKGM ALSCGA
Sbjct: 72 PERDVIAWTAMIAGYTSCSHHNHAWAMFCEMVRNGMEPNAFTFSSVLKACKGMGALSCGA 131
Query: 130 LAHSLATKHGIDRSMYVQNALLDMYATSCATMDDALTVFNDIPLKTAVSWTTLIAGLTHR 189
L H A K G+ S+YV+NAL+DMYAT CA+M+DA VF+DI K VSWTTLI G THR
Sbjct: 132 LVHGSAVKRGMQGSIYVENALMDMYATCCASMEDACVVFDDICEKNDVSWTTLITGFTHR 191
Query: 190 GDGYSGLQAFRQMLLEDVEPNSFSFSIAVRACASIRSYSCGKQIHAAVTKYGLHCDVPVM 249
GDGY GL+ F+QMLLE+ E N FSFSIAVRACASI S+S GKQIH+AV K+G ++PVM
Sbjct: 192 GDGYGGLRVFQQMLLEEAELNPFSFSIAVRACASIGSHSFGKQIHSAVIKHGFESNLPVM 251
Query: 250 NSILDMYCRCNYLCDAKRCFGEMTQKNLITWNTLIAGYERSDSSESLSLFFQMGSEGYEP 309
NSILDMYC+ L +A +CF E+++++LITWNTLI+GYER D ESL +F M SEG+ P
Sbjct: 252 NSILDMYCKFGCLSEANQCFHEISERDLITWNTLISGYERLDPRESLRIFSHMDSEGFSP 311
Query: 310 NCFTLTSITAACANLAVLSCGQQVHGGIVRRGFDKSVALINALIDMYAKCGNINDSHKLF 369
NCFT +S+ +ACANLAVL+CG+QVHGGI+RRG DK++AL NALIDMYAKCG+I++SHK F
Sbjct: 312 NCFTYSSVISACANLAVLNCGEQVHGGIIRRGLDKNLALANALIDMYAKCGSISNSHKTF 371
Query: 370 CDMPERDLVSWTTMMIGYGAHGYGKEAVKLFDEMVRSGIQPDRIVFMAVLSGCSHAGLVD 429
+M +R+LVSWT+MMIGYGAHGYGKEAV++FD+MV+SGI+PD+IVFMAVLS CSHAGLVD
Sbjct: 372 NEMSDRNLVSWTSMMIGYGAHGYGKEAVEMFDKMVKSGIRPDQIVFMAVLSACSHAGLVD 431
Query: 430 KGLRYFRSMLEDYNLNPDQEIYGCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALLGA 489
+GLRYF SM+ DY + PDQ+IYGCVVDLLGR GRVEEA++L+E+MPF+PDESVWGALLGA
Sbjct: 432 EGLRYFESMISDYKVTPDQDIYGCVVDLLGRGGRVEEAYELIESMPFKPDESVWGALLGA 491
Query: 490 CKAYELSNLRSLAAQRVLDTRPNMAGTYLLLSNIYAAEGKWGEFAKMRKLMKGMDNKKEV 549
CKA+EL LR +AAQR+L+ PNM GTY++LSNIYAAEG+WGEFA RK+M+GM NKKEV
Sbjct: 492 CKAHELPQLRKVAAQRLLELTPNMVGTYVMLSNIYAAEGEWGEFANTRKMMRGMGNKKEV 551
Query: 550 GKSWIEIRNEVYSFVVGDKVGPHIKWVHKVLELLIWHMKDYGDVTDLD 598
G+SWIE+RN VYSFVVGDKVG HI V++VLE+LI H+K + DLD
Sbjct: 552 GRSWIEVRNRVYSFVVGDKVGSHINLVYEVLEVLISHIKAAEHINDLD 599
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PPR83_ARATH | 1.6e-204 | 57.95 | Putative pentatricopeptide repeat-containing protein At1g56570 OS=Arabidopsis th... | [more] |
| PP151_ARATH | 3.1e-110 | 36.10 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN... | [more] |
| PP320_ARATH | 9.9e-109 | 36.26 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
| PPR32_ARATH | 2.1e-106 | 35.43 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
| PP224_ARATH | 1.3e-105 | 34.30 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LW37_CUCSA | 0.0e+00 | 90.92 | Uncharacterized protein OS=Cucumis sativus GN=Csa_1G555630 PE=4 SV=1 | [more] |
| F6I4U5_VITVI | 3.4e-249 | 68.54 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00870 PE=4 SV=... | [more] |
| A0A061F4Y1_THECC | 6.6e-237 | 68.20 | Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TC... | [more] |
| W9QSM5_9ROSA | 2.4e-234 | 67.57 | Uncharacterized protein OS=Morus notabilis GN=L484_018897 PE=4 SV=1 | [more] |
| M5W7M0_PRUPE | 4.0e-234 | 69.35 | Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026465mg PE=4 S... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G56570.1 | 9.2e-206 | 57.95 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G13600.1 | 1.7e-111 | 36.10 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G18750.1 | 5.6e-110 | 36.26 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G11290.1 | 1.2e-107 | 35.43 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G12770.1 | 7.5e-107 | 34.30 | mitochondrial editing factor 22 | [more] |
