Lsi06G000430 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G000430
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Photosystem II CP47 reaction center protein
Location	chr06 : 365951 .. 367471 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTGCCTTGGTATCGTGTTCATACCGTTGTATTGAATGATCCCGGTCGTTTGCTTTCTGTTCATATAATGCATACAGCTCTAGTTGCTGGTTGGGCCGGTTCAATGGCCCTATACGAATTAGCTGTTTTTGATCCCTCTGATCCTGTTCTTGATCCAATGTGGAGACAAGGTATGTTCGTTATACCCTTCATGACTCGTTTAGGAATAACCAATTCATGGGGGGGTTGGAGTATCACAGGAGGGACTATAACGAATCCGGGTATTTGGAGTTACGAAGGTGTGGCCGGAGCACATATTGTGTTTTCTGGATTGTGCTTCTTAGCAGCTATCTGGCATTGGGTGTATTGGGATCTAGAAATATTTTGTGATGAACGTACAGGAAAACCTTCTTTGGATTTGCCGAAGATTTTTGGAATTCATTTATTTCTCTCAGGGTTGGGTTGCTTTGGTTTTGGTGCATTTCATGTAACCGGATTGTATGGTCCGGGAATATGGGTATCCGATCCTTATGGATTAACCGGAAGGGTACAAGCTGTAAATCCTGCGTGGGGTGTCGAAGGGTTTGATCCTTTTGTTCCGGGCGGAATAGCCTCGCATCATATTGCAGCAGGTACATTGGGCATATTAGCGGGCCTATTCCATCTTAGTGTTCGTCCACCCCAACGTCTATACAAAGGATTACGTATGGGAAATATTGAAACCGTCCTTTCGAGTAGTATCGCTGCTGTATTTTTTGCAGCTTTTGTTGTTGCTGGAACTATGTGGTATGGTTCAGCAACTACCCCGATTGAATTATTTGGGCCCACTCGTTATCAATGGGATCAGGGATACTTCCAGCAAGAAATATATCGAAGAGTTAGTGCCGGGTTAGCCGAAAATCAAAGTTTATCAGAAGCTTGGTCTAAAATTCCTGAAAAATTAGCTTTTTATGATTATATCGGGAATAATCCCGCAAAAGGTGGATTATTCAGAGCGGGTTCCATGGACAACGGGGATGGAATAGCTGTTGGGTGGTTAGGACACCCTGTTTTTAGAGATAAAGAAGGGCGCGAACTTTTTGTACGCCGTATGCCGACCTTTTTTGAAACATTTCCGGTTGTTTTGGTAGACGGAGACGGAATTGTTAGAGCCGATGTTCCTTTTCGAAGAGCAGAATCGAAGTATAGTGTTGAACAGGTCGGTGTAACAGTTGAGTTCTATGGCGGTGAACTCAATGGGGTCAGTTATAGTGATCCTGCTACTGTGAAAAAATATGCTAGACGTGCTCAATTGGGTGAAATTTTTGAATTAGATCGTGCTACTTTGAAATCCGATGGGGTTTTTCGTAGCAGTCCAAGGGGTTGGTTTACTTTTGGGCATGCTTCGTTTGCTTTGCTCTTCTTCTTCGGACACATTTGGCATGGTGCTAGAACCTTGTTCAGAGATGTCTTTGCTGGGATTGACCCAGATTTGGACGCTCAAGTAGAATTTGGGGCATTCCAAAAACTTGGAGATCCAACTACAAAAAGAGTCTAG

mRNA sequence

ATGGGTTTGCCTTGGTATCGTGTTCATACCGTTGTATTGAATGATCCCGGTCGTTTGCTTTCTGTTCATATAATGCATACAGCTCTAGTTGCTGGTTGGGCCGGTTCAATGGCCCTATACGAATTAGCTGTTTTTGATCCCTCTGATCCTGTTCTTGATCCAATGTGGAGACAAGGTATGTTCGTTATACCCTTCATGACTCGTTTAGGAATAACCAATTCATGGGGGGGTTGGAGTATCACAGGAGGGACTATAACGAATCCGGGTATTTGGAGTTACGAAGGTGTGGCCGGAGCACATATTGTGTTTTCTGGATTGTGCTTCTTAGCAGCTATCTGGCATTGGGTGTATTGGGATCTAGAAATATTTTGTGATGAACGTACAGGAAAACCTTCTTTGGATTTGCCGAAGATTTTTGGAATTCATTTATTTCTCTCAGGGTTGGGTTGCTTTGGTTTTGGTGCATTTCATGTAACCGGATTGTATGGTCCGGGAATATGGGTATCCGATCCTTATGGATTAACCGGAAGGGTACAAGCTGTAAATCCTGCGTGGGGTGTCGAAGGGTTTGATCCTTTTGTTCCGGGCGGAATAGCCTCGCATCATATTGCAGCAGGTACATTGGGCATATTAGCGGGCCTATTCCATCTTAGTGTTCGTCCACCCCAACGTCTATACAAAGGATTACGTATGGGAAATATTGAAACCGTCCTTTCGAGTAGTATCGCTGCTGTATTTTTTGCAGCTTTTGTTGTTGCTGGAACTATGTGGTATGGTTCAGCAACTACCCCGATTGAATTATTTGGGCCCACTCGTTATCAATGGGATCAGGGATACTTCCAGCAAGAAATATATCGAAGAGTTAGTGCCGGGTTAGCCGAAAATCAAAGTTTATCAGAAGCTTGGTCTAAAATTCCTGAAAAATTAGCTTTTTATGATTATATCGGGAATAATCCCGCAAAAGGTGGATTATTCAGAGCGGGTTCCATGGACAACGGGGATGGAATAGCTGTTGGGTGGTTAGGACACCCTGTTTTTAGAGATAAAGAAGGGCGCGAACTTTTTGTACGCCGTATGCCGACCTTTTTTGAAACATTTCCGGTTGTTTTGGTAGACGGAGACGGAATTGTTAGAGCCGATGTTCCTTTTCGAAGAGCAGAATCGAAGTATAGTGTTGAACAGGTCGGTGTAACAGTTGAGTTCTATGGCGGTGAACTCAATGGGGTCAGTTATAGTGATCCTGCTACTGTGAAAAAATATGCTAGACGTGCTCAATTGGGTGAAATTTTTGAATTAGATCGTGCTACTTTGAAATCCGATGGGGTTTTTCGTAGCAGTCCAAGGGGTTGGTTTACTTTTGGGCATGCTTCGTTTGCTTTGCTCTTCTTCTTCGGACACATTTGGCATGGTGCTAGAACCTTGTTCAGAGATGTCTTTGCTGGGATTGACCCAGATTTGGACGCTCAAGTAGAATTTGGGGCATTCCAAAAACTTGGAGATCCAACTACAAAAAGAGTCTAG

Coding sequence (CDS)

ATGGGTTTGCCTTGGTATCGTGTTCATACCGTTGTATTGAATGATCCCGGTCGTTTGCTTTCTGTTCATATAATGCATACAGCTCTAGTTGCTGGTTGGGCCGGTTCAATGGCCCTATACGAATTAGCTGTTTTTGATCCCTCTGATCCTGTTCTTGATCCAATGTGGAGACAAGGTATGTTCGTTATACCCTTCATGACTCGTTTAGGAATAACCAATTCATGGGGGGGTTGGAGTATCACAGGAGGGACTATAACGAATCCGGGTATTTGGAGTTACGAAGGTGTGGCCGGAGCACATATTGTGTTTTCTGGATTGTGCTTCTTAGCAGCTATCTGGCATTGGGTGTATTGGGATCTAGAAATATTTTGTGATGAACGTACAGGAAAACCTTCTTTGGATTTGCCGAAGATTTTTGGAATTCATTTATTTCTCTCAGGGTTGGGTTGCTTTGGTTTTGGTGCATTTCATGTAACCGGATTGTATGGTCCGGGAATATGGGTATCCGATCCTTATGGATTAACCGGAAGGGTACAAGCTGTAAATCCTGCGTGGGGTGTCGAAGGGTTTGATCCTTTTGTTCCGGGCGGAATAGCCTCGCATCATATTGCAGCAGGTACATTGGGCATATTAGCGGGCCTATTCCATCTTAGTGTTCGTCCACCCCAACGTCTATACAAAGGATTACGTATGGGAAATATTGAAACCGTCCTTTCGAGTAGTATCGCTGCTGTATTTTTTGCAGCTTTTGTTGTTGCTGGAACTATGTGGTATGGTTCAGCAACTACCCCGATTGAATTATTTGGGCCCACTCGTTATCAATGGGATCAGGGATACTTCCAGCAAGAAATATATCGAAGAGTTAGTGCCGGGTTAGCCGAAAATCAAAGTTTATCAGAAGCTTGGTCTAAAATTCCTGAAAAATTAGCTTTTTATGATTATATCGGGAATAATCCCGCAAAAGGTGGATTATTCAGAGCGGGTTCCATGGACAACGGGGATGGAATAGCTGTTGGGTGGTTAGGACACCCTGTTTTTAGAGATAAAGAAGGGCGCGAACTTTTTGTACGCCGTATGCCGACCTTTTTTGAAACATTTCCGGTTGTTTTGGTAGACGGAGACGGAATTGTTAGAGCCGATGTTCCTTTTCGAAGAGCAGAATCGAAGTATAGTGTTGAACAGGTCGGTGTAACAGTTGAGTTCTATGGCGGTGAACTCAATGGGGTCAGTTATAGTGATCCTGCTACTGTGAAAAAATATGCTAGACGTGCTCAATTGGGTGAAATTTTTGAATTAGATCGTGCTACTTTGAAATCCGATGGGGTTTTTCGTAGCAGTCCAAGGGGTTGGTTTACTTTTGGGCATGCTTCGTTTGCTTTGCTCTTCTTCTTCGGACACATTTGGCATGGTGCTAGAACCTTGTTCAGAGATGTCTTTGCTGGGATTGACCCAGATTTGGACGCTCAAGTAGAATTTGGGGCATTCCAAAAACTTGGAGATCCAACTACAAAAAGAGTCTAG

Protein sequence

MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRV

Homology

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BLAST of Lsi06G000430 vs. Swiss-Prot
Match: PSBB_CUCSA (Photosystem II CP47 reaction center protein OS=Cucumis sativus GN=psbB PE=3 SV=1)

HSP 1 Score: 1055.8 bits (2729), Expect = 1.5e-307
Identity = 502/506 (99.21%), Postives = 503/506 (99.41%), Query Frame = 1


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHI+FSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHILFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIF DERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFSDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVS GLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQSLSE 300

Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
           ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 507
           GIDPDLD QVEFGAFQKLGDPTTKRV
Sbjct: 481 GIDPDLDTQVEFGAFQKLGDPTTKRV 506

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BLAST of Lsi06G000430 vs. Swiss-Prot
Match: PSBB_NICTO (Photosystem II CP47 reaction center protein OS=Nicotiana tomentosiformis GN=psbB PE=3 SV=1)

HSP 1 Score: 1055.0 bits (2727), Expect = 2.5e-307
Identity = 499/505 (98.81%), Postives = 503/505 (99.60%), Query Frame = 1


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
           FVIPFMTRLGITNSWGGWSITGGT+TNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ 
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQP 180

Query: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
           ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKR 506
           GIDPDLDAQVEFGAFQKLGDPTTKR
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTKR 505

[Close]

BLAST of Lsi06G000430 vs. Swiss-Prot
Match: PSBB_NICSY (Photosystem II CP47 reaction center protein OS=Nicotiana sylvestris GN=psbB PE=3 SV=1)

HSP 1 Score: 1055.0 bits (2727), Expect = 2.5e-307
Identity = 499/505 (98.81%), Postives = 503/505 (99.60%), Query Frame = 1


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
           FVIPFMTRLGITNSWGGWSITGGT+TNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ 
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQP 180

Query: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
           ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKR 506
           GIDPDLDAQVEFGAFQKLGDPTTKR
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTKR 505

[Close]

BLAST of Lsi06G000430 vs. Swiss-Prot
Match: PSBB_ATRBE (Photosystem II CP47 reaction center protein OS=Atropa belladonna GN=psbB PE=3 SV=1)

HSP 1 Score: 1055.0 bits (2727), Expect = 2.5e-307
Identity = 499/505 (98.81%), Postives = 503/505 (99.60%), Query Frame = 1


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
           FVIPFMTRLGITNSWGGWSITGGT+TNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ 
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQP 180

Query: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
           ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKR 506
           GIDPDLDAQVEFGAFQKLGDPTTKR
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTKR 505

[Close]

BLAST of Lsi06G000430 vs. Swiss-Prot
Match: PSBB_TOBAC (Photosystem II CP47 reaction center protein OS=Nicotiana tabacum GN=psbB PE=3 SV=1)

HSP 1 Score: 1055.0 bits (2727), Expect = 2.5e-307
Identity = 499/505 (98.81%), Postives = 503/505 (99.60%), Query Frame = 1


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
           FVIPFMTRLGITNSWGGWSITGGT+TNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ 
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQP 180

Query: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
           ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKR 506
           GIDPDLDAQVEFGAFQKLGDPTTKR
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTKR 505

[Close]

BLAST of Lsi06G000430 vs. TrEMBL
Match: A0A0S2IFL2_9ROSI (Photosystem II CP47 reaction center protein OS=Cucurbita andreana GN=psbB PE=3 SV=1)

HSP 1 Score: 1063.9 bits (2750), Expect = 6.0e-308
Identity = 506/506 (100.00%), Postives = 506/506 (100.00%), Query Frame = 1


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
           ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 507
           GIDPDLDAQVEFGAFQKLGDPTTKRV
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 506

[Close]

BLAST of Lsi06G000430 vs. TrEMBL
Match: A0A0S2IHI2_CUCPE (Photosystem II CP47 reaction center protein OS=Cucurbita pepo var. ozarkana GN=psbB PE=3 SV=1)

HSP 1 Score: 1063.9 bits (2750), Expect = 6.0e-308
Identity = 506/506 (100.00%), Postives = 506/506 (100.00%), Query Frame = 1


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
           ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 507
           GIDPDLDAQVEFGAFQKLGDPTTKRV
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 506

[Close]

BLAST of Lsi06G000430 vs. TrEMBL
Match: A0A0S2IG25_9ROSI (Photosystem II CP47 reaction center protein OS=Cucurbita okeechobeensis subsp. martinezii GN=psbB PE=3 SV=1)

HSP 1 Score: 1063.9 bits (2750), Expect = 6.0e-308
Identity = 506/506 (100.00%), Postives = 506/506 (100.00%), Query Frame = 1


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
           ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 507
           GIDPDLDAQVEFGAFQKLGDPTTKRV
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 506

[Close]

BLAST of Lsi06G000430 vs. TrEMBL
Match: A0A0S2IHD9_CUCPE (Photosystem II CP47 reaction center protein OS=Cucurbita pepo subsp. pepo GN=psbB PE=3 SV=1)

HSP 1 Score: 1063.9 bits (2750), Expect = 6.0e-308
Identity = 506/506 (100.00%), Postives = 506/506 (100.00%), Query Frame = 1


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
           ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 507
           GIDPDLDAQVEFGAFQKLGDPTTKRV
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 506

[Close]

BLAST of Lsi06G000430 vs. TrEMBL
Match: A0A0S2IFC4_9ROSI (Photosystem II CP47 reaction center protein OS=Cucurbita lundelliana GN=psbB PE=3 SV=1)

HSP 1 Score: 1063.9 bits (2750), Expect = 6.0e-308
Identity = 506/506 (100.00%), Postives = 506/506 (100.00%), Query Frame = 1


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
           ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 507
           GIDPDLDAQVEFGAFQKLGDPTTKRV
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 506

[Close]

BLAST of Lsi06G000430 vs. TAIR10
Match: ATCG00680.1 (ATCG00680.1 photosystem II reaction center protein B)

HSP 1 Score: 1049.7 bits (2713), Expect = 5.9e-307
Identity = 496/505 (98.22%), Postives = 503/505 (99.60%), Query Frame = 1


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLL+VHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
           FVIPFMTRLGITNSWGGW+ITGGTITNPG+WSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWNITGGTITNPGLWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ 
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQP 180

Query: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AW+KIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFR+KEGRELFVRRMP
Sbjct: 301 AWAKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRNKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
           ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKR 506
           GIDPDLDAQVEFGAFQKLGDPTTKR
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTKR 505

[Close]

BLAST of Lsi06G000430 vs. NCBI nr
Match: gi|595645224|gb|AHM88687.1| (photosystem II CP47 chlorophyll apoprotein (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 1063.9 bits (2750), Expect = 8.6e-308
Identity = 506/506 (100.00%), Postives = 506/506 (100.00%), Query Frame = 1


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
           ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 507
           GIDPDLDAQVEFGAFQKLGDPTTKRV
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 506

[Close]

BLAST of Lsi06G000430 vs. NCBI nr
Match: gi|952954488|gb|ALO21850.1| (PsbB (plastid) [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1063.5 bits (2749), Expect = 1.1e-307
Identity = 505/506 (99.80%), Postives = 506/506 (100.00%), Query Frame = 1


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
           ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 507
           GIDPDLDAQVEFGAFQKLGDPTTKRV
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 506

[Close]

BLAST of Lsi06G000430 vs. NCBI nr
Match: gi|346578217|ref|YP_004841809.1| (photosystem II CP47 chlorophyll apoprotein [Cucumis melo subsp. melo])

HSP 1 Score: 1062.4 bits (2746), Expect = 2.5e-307
Identity = 505/506 (99.80%), Postives = 505/506 (99.80%), Query Frame = 1


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVS GLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQSLSE 300

Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
           ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 507
           GIDPDLDAQVEFGAFQKLGDPTTKRV
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 506

[Close]

BLAST of Lsi06G000430 vs. NCBI nr
Match: gi|952954797|gb|ALO22154.1| (PsbB (plastid) [Cucurbita foetidissima])

HSP 1 Score: 1061.6 bits (2744), Expect = 4.3e-307
Identity = 505/506 (99.80%), Postives = 505/506 (99.80%), Query Frame = 1


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300

Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGREL VRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELLVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
           ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 507
           GIDPDLDAQVEFGAFQKLGDPTTKRV
Sbjct: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 506

[Close]

BLAST of Lsi06G000430 vs. NCBI nr
Match: gi|590000440|ref|YP_009004069.1| (photosystem II CP47 chlorophyll apoprotein [Cucumis hystrix])

HSP 1 Score: 1055.8 bits (2729), Expect = 2.3e-305
Identity = 502/506 (99.21%), Postives = 503/506 (99.41%), Query Frame = 1


Query: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
           FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHI+FSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHILFSGLCFLAAIWHWVYWDL 120

Query: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180
           EIF DERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA
Sbjct: 121 EIFSDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQA 180

Query: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240
           VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS
Sbjct: 181 VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSS 240

Query: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE 300
           SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVS GLAENQSLSE
Sbjct: 241 SIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQSLSE 300

Query: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360
           AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP
Sbjct: 301 AWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMP 360

Query: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420
           TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY
Sbjct: 361 TFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKY 420

Query: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480
           ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA
Sbjct: 421 ARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFA 480

Query: 481 GIDPDLDAQVEFGAFQKLGDPTTKRV 507
           GIDPDLD QVEFGAFQKLGDPTTKRV
Sbjct: 481 GIDPDLDTQVEFGAFQKLGDPTTKRV 506

The following BLAST results are available for this feature:

BLAST of Lsi06G000430 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PSBB_CUCSA	1.5e-307	99.21	Photosystem II CP47 reaction center protein OS=Cucumis sativus GN=psbB PE=3 SV=1	[more]
PSBB_NICTO	2.5e-307	98.81	Photosystem II CP47 reaction center protein OS=Nicotiana tomentosiformis GN=psbB...	[more]
PSBB_NICSY	2.5e-307	98.81	Photosystem II CP47 reaction center protein OS=Nicotiana sylvestris GN=psbB PE=3...	[more]
PSBB_ATRBE	2.5e-307	98.81	Photosystem II CP47 reaction center protein OS=Atropa belladonna GN=psbB PE=3 SV...	[more]
PSBB_TOBAC	2.5e-307	98.81	Photosystem II CP47 reaction center protein OS=Nicotiana tabacum GN=psbB PE=3 SV...	[more]

BLAST of Lsi06G000430 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0S2IFL2_9ROSI	6.0e-308	100.00	Photosystem II CP47 reaction center protein OS=Cucurbita andreana GN=psbB PE=3 S...	[more]
A0A0S2IHI2_CUCPE	6.0e-308	100.00	Photosystem II CP47 reaction center protein OS=Cucurbita pepo var. ozarkana GN=p...	[more]
A0A0S2IG25_9ROSI	6.0e-308	100.00	Photosystem II CP47 reaction center protein OS=Cucurbita okeechobeensis subsp. m...	[more]
A0A0S2IHD9_CUCPE	6.0e-308	100.00	Photosystem II CP47 reaction center protein OS=Cucurbita pepo subsp. pepo GN=psb...	[more]
A0A0S2IFC4_9ROSI	6.0e-308	100.00	Photosystem II CP47 reaction center protein OS=Cucurbita lundelliana GN=psbB PE=...	[more]

BLAST of Lsi06G000430 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG00680.1	5.9e-307	98.22	ATCG00680.1 photosystem II reaction center protein B	[more]

BLAST of Lsi06G000430 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|595645224\|gb\|AHM88687.1\|	8.6e-308	100.00	photosystem II CP47 chlorophyll apoprotein (chloroplast) [Lagenaria siceraria]	[more]
gi\|952954488\|gb\|ALO21850.1\|	1.1e-307	99.80	PsbB (plastid) [Cucurbita argyrosperma subsp. sororia]	[more]
gi\|346578217\|ref\|YP_004841809.1\|	2.5e-307	99.80	photosystem II CP47 chlorophyll apoprotein [Cucumis melo subsp. melo]	[more]
gi\|952954797\|gb\|ALO22154.1\|	4.3e-307	99.80	PsbB (plastid) [Cucurbita foetidissima]	[more]
gi\|590000440\|ref\|YP_009004069.1\|	2.3e-305	99.21	photosystem II CP47 chlorophyll apoprotein [Cucumis hystrix]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis
GO:0009772	photosynthetic electron transport in photosystem II
GO:0009767	photosynthetic electron transport chain
GO:0019684	photosynthesis, light reaction

Vocabulary: **Cellular Component**
Term	Definition
GO:0009523	photosystem II
GO:0016020	membrane
GO:0009521	photosystem

Vocabulary: **Molecular Function**
Term	Definition
GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0016168	chlorophyll binding

Vocabulary: **INTERPRO**
Term	Definition
IPR017486	Photosystem II CP47 reaction centre protein
IPR000932	PS_antenna-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0015979	photosynthesis
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
cellular_component	GO:0009521	photosystem
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G000430.1	Lsi06G000430.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000932	Photosystem antenna protein-like	PFAM	PF00421	PSII	coord: 1..500 score: 3.4E
IPR000932	Photosystem antenna protein-like	unknown	SSF161077	Photosystem II antenna protein-like	coord: 2..488 score: 1.57E
IPR017486	Photosystem II CP47 reaction centre protein	HAMAP	MF_01495	PSII_PsbB_CP47	coord: 1..506 score: 61
IPR017486	Photosystem II CP47 reaction centre protein	TIGRFAMs	TIGR03039	TIGR03039	coord: 1..504 score: 9.6E
None	No IPR available	PANTHER	PTHR33180	FAMILY NOT NAMED	coord: 1..506 score:
None	No IPR available	PANTHER	PTHR33180:SF8	SUBFAMILY NOT NAMED	coord: 1..506 score:

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G000430	Cucumber (Gy14) v1	cgylsiB033
Lsi06G000430	Cucumber (Gy14) v1	cgylsiB035
Lsi06G000430	Cucurbita maxima (Rimu)	cmalsiB076
Lsi06G000430	Cucurbita maxima (Rimu)	cmalsiB133
Lsi06G000430	Cucurbita maxima (Rimu)	cmalsiB142
Lsi06G000430	Cucurbita moschata (Rifu)	cmolsiB062
Lsi06G000430	Cucurbita moschata (Rifu)	cmolsiB122
Lsi06G000430	Cucurbita pepo (Zucchini)	cpelsiB302
Lsi06G000430	Cucurbita pepo (Zucchini)	cpelsiB560
Lsi06G000430	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G000430	Wild cucumber (PI 183967)	cpilsiB076
Lsi06G000430	Cucumber (Chinese Long) v2	culsiB058
Lsi06G000430	Cucumber (Chinese Long) v2	culsiB075
Lsi06G000430	Melon (DHL92) v3.5.1	lsimeB396
Lsi06G000430	Watermelon (Charleston Gray)	lsiwcgB364
Lsi06G000430	Watermelon (97103) v1	lsiwmB396
Lsi06G000430	Cucumber (Gy14) v2	cgyblsiB055
Lsi06G000430	Cucumber (Gy14) v2	cgyblsiB073
Lsi06G000430	Melon (DHL92) v3.6.1	lsimedB418
Lsi06G000430	Cucumber (Chinese Long) v3	cuclsiB068
Lsi06G000430	Cucumber (Chinese Long) v3	cuclsiB086
Lsi06G000430	Watermelon (97103) v2	lsiwmbB365
Lsi06G000430	Wax gourd	lsiwgoB522