Lsi06G000360 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G000360
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Cytochrome c biogenesis protein CcsA
Location	chr06 : 353692 .. 354551 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCGTCAGAAAAGGGCATGATAGCTACTTTTTTCTGTATAACAGGATTATTAGTTACTCGTTGGATTTATTTGAGGCATTTACCTTTAAGTGATTTATATGAATCATTACTATTTCTTTCATGGGGTTTCTCCATTATTCATCTATTTACGTATTTTAAAAAATATAAAAACCATTTAAGTGTAAGCGCAATAACCGCGCCAAGTACTATTTTTACCCAAGGTTTTGCTACTTCAGGTTTTTTAACTGAAATGCATCAATCCCCACTATTAGTTCCCGCTCTCCAATCTCATTGGTTAATGATGCACGTAAGTATGATGGTATTGGGTTATGCAGCTCTTTTATGTGGATCATTATTTTCAGTAGCTCTTATAGTGATTACATTTCAAAAAGCTATAAGAATTTTTGGTAAAAACAATAATTTCTTAAATGCGTTATTTTCCTTTGATGAGATCCAATACATGAATGAAGGGAACAATTTTTTAAGAAACACTTCCTTTTTTTCTTCGAAGAATTATTATAAGTCTCAACTGATTCAACAATTAGATCATTGGAGTTATCGTATTATTAGTCTAGGGTTTATCTTTTTAAGCATAGGTATTCTTTCAGGGGCAGTATGGGCTAATGAGACATGGGGATCGTATTGGAATTGGGACCCAAAGGAAACTTGGGCATTTATTACTTGGACCATATTCGCAATTTATTTACATACGCGAACAAATAAAAATTTTGAAGGTGTAAATTCTGCAATTGTGGCCTCTATGGGTTTTCTTATAATTTGGATATGCTATTTTGGGGTCAATCTATTAGGGATAGGGCTACATAGTTATGGTTCATTTACATTAACATCTAATTGA

mRNA sequence

ATGTTTCGATTATTAGTTACTCGTTGGATTTATTTGAGGCATTTACCTTTAAGTGATTTATATGAATCATTACTATTTCTTTCATGGGGTTTCTCCATTATTCATCTATTTACGTATTTTAAAAAATATAAAAACCATTTAAGTGTAAGCGCAATAACCGCGCCAAGTACTATTTTTACCCAAGGTTTTGCTACTTCAGGTTTTTTAACTGAAATGCATCAATCCCCACTATTAGTTCCCGCTCTCCAATCTCATTGGTTAATGATGCACGTAAGTATGATGGTATTGGGTTATGCAGCTCTTTTATGTGGATCATTATTTTCAGTAGCTCTTATAGTGATTACATTTCAAAAAGCTATAAGAATTTTTGGTAAAAACAATAATTTCTTAAATGCGTTATTTTCCTTTGATGAGATCCAATACATGAATGAAGGGAACAATTTTTTAAGAAACACTTCCTTTTTTTCTTCGAAGAATTATTATAAGTCTCAACTGATTCAACAATTAGATCATTGGAGTTATCGTATTATTAGTCTAGGGTTTATCTTTTTAAGCATAGGTATTCTTTCAGGGGCAGTATGGGCTAATGAGACATGGGGATCGTATTGGAATTGGGACCCAAAGGAAACTTGGGCATTTATTACTTGGACCATATTCGCAATTTATTTACATACGCGAACAAATAAAAATTTTGAAGGTGTAAATTCTGCAATTGTGGCCTCTATGGGTTTTCTTATAATTTGGATATGCTATTTTGGGGTCAATCTATTAGGGATAGGGCTACATAGTTATGGTTCATTTACATTAACATCTAATTGA

Coding sequence (CDS)

ATGTTTCGATTATTAGTTACTCGTTGGATTTATTTGAGGCATTTACCTTTAAGTGATTTATATGAATCATTACTATTTCTTTCATGGGGTTTCTCCATTATTCATCTATTTACGTATTTTAAAAAATATAAAAACCATTTAAGTGTAAGCGCAATAACCGCGCCAAGTACTATTTTTACCCAAGGTTTTGCTACTTCAGGTTTTTTAACTGAAATGCATCAATCCCCACTATTAGTTCCCGCTCTCCAATCTCATTGGTTAATGATGCACGTAAGTATGATGGTATTGGGTTATGCAGCTCTTTTATGTGGATCATTATTTTCAGTAGCTCTTATAGTGATTACATTTCAAAAAGCTATAAGAATTTTTGGTAAAAACAATAATTTCTTAAATGCGTTATTTTCCTTTGATGAGATCCAATACATGAATGAAGGGAACAATTTTTTAAGAAACACTTCCTTTTTTTCTTCGAAGAATTATTATAAGTCTCAACTGATTCAACAATTAGATCATTGGAGTTATCGTATTATTAGTCTAGGGTTTATCTTTTTAAGCATAGGTATTCTTTCAGGGGCAGTATGGGCTAATGAGACATGGGGATCGTATTGGAATTGGGACCCAAAGGAAACTTGGGCATTTATTACTTGGACCATATTCGCAATTTATTTACATACGCGAACAAATAAAAATTTTGAAGGTGTAAATTCTGCAATTGTGGCCTCTATGGGTTTTCTTATAATTTGGATATGCTATTTTGGGGTCAATCTATTAGGGATAGGGCTACATAGTTATGGTTCATTTACATTAACATCTAATTGA

Protein sequence

MFRLLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGFATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIFGKNNNFLNALFSFDEIQYMNEGNNFLRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIFLSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMGFLIIWICYFGVNLLGIGLHSYGSFTLTSN

Homology

[Close]

BLAST of Lsi06G000360 vs. Swiss-Prot
Match: CCSA_CUCSA (Cytochrome c biogenesis protein CcsA OS=Cucumis sativus GN=ccsA PE=3 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 1.8e-147
Identity = 262/269 (97.40%), Postives = 265/269 (98.51%), Query Frame = 1


Query: 4   LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 63
           LLVTRWIYLRHLPLSDLYESLLFLSW FSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF
Sbjct: 55  LLVTRWIYLRHLPLSDLYESLLFLSWAFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 114

Query: 64  ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 123
           ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF
Sbjct: 115 ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 174

Query: 124 GKNNNFLNALFSFDEIQYMNEGNNFLRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 183
            KNNN LNALFSF+EIQY+NEGN F+RNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF
Sbjct: 175 CKNNNLLNALFSFNEIQYINEGNYFVRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 234

Query: 184 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 243
           LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG
Sbjct: 235 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 294

Query: 244 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 273
           FLIIWICYFGVNLLGIGLHSYGSFTLTSN
Sbjct: 295 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 323

[Close]

BLAST of Lsi06G000360 vs. Swiss-Prot
Match: CCSA_VITVI (Cytochrome c biogenesis protein CcsA OS=Vitis vinifera GN=ccsA PE=3 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 4.0e-126
Identity = 224/269 (83.27%), Postives = 243/269 (90.33%), Query Frame = 1


Query: 4   LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 63
           LLVTRWIYL H PLSDLYESL+FLSW FSIIH+  YFKK+KNHLS  A+TAPS IFTQGF
Sbjct: 55  LLVTRWIYLGHFPLSDLYESLIFLSWSFSIIHIVPYFKKHKNHLS--ALTAPSAIFTQGF 114

Query: 64  ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 123
           ATSG LTEMHQS +LVPALQS WLMMHVSMMVLGYAALLCGSL SVAL+VITF++ IRI 
Sbjct: 115 ATSGLLTEMHQSEILVPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRQDIRIL 174

Query: 124 GKNNNFLNALFSFDEIQYMNEGNNFLRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 183
            KNN+FLN  FSFDEIQYMN+GNN L+NTSF S +NYY++Q IQQLDHWSYR+ISLGF+F
Sbjct: 175 CKNNHFLNKSFSFDEIQYMNKGNNVLQNTSFLSVRNYYRAQFIQQLDHWSYRVISLGFLF 234

Query: 184 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 243
           L+IGILSGAVWANE WGSYWNWDPKETWAFITWTIFAIYLHTRTNKN +  NSAIVASMG
Sbjct: 235 LTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNLQVANSAIVASMG 294

Query: 244 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 273
           FLIIWICYFGVNLLGIGLHSYGSFT +SN
Sbjct: 295 FLIIWICYFGVNLLGIGLHSYGSFTFSSN 321

[Close]

BLAST of Lsi06G000360 vs. Swiss-Prot
Match: CCSA_MORIN (Cytochrome c biogenesis protein CcsA OS=Morus indica GN=ccsA PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 3.4e-125
Identity = 225/269 (83.64%), Postives = 243/269 (90.33%), Query Frame = 1


Query: 4   LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 63
           LL+TRWIYLR+LPLS+LYESL+FLSW FSIIH+  YFKKYKN+L   AITAPS IFTQGF
Sbjct: 55  LLMTRWIYLRYLPLSNLYESLIFLSWSFSIIHMVPYFKKYKNYLK--AITAPSAIFTQGF 114

Query: 64  ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 123
           ATSG LTEMHQS +LVPALQSHWLMMHVSMMVLGYAALLCGSL S+AL+VITF+K I IF
Sbjct: 115 ATSGLLTEMHQSEILVPALQSHWLMMHVSMMVLGYAALLCGSLLSLALLVITFRKFISIF 174

Query: 124 GKNNNFLNALFSFDEIQYMNEGNNFLRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 183
            K+NNF+N  FS  EIQY+ E NN L NTSF SS+NYY+ QLIQQLD WSYRIISLGFIF
Sbjct: 175 SKSNNFVNESFSLGEIQYVREKNNLLPNTSFLSSRNYYRFQLIQQLDLWSYRIISLGFIF 234

Query: 184 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 243
           L+IGILSGAVWANE WGSYWNWDPKETWAFITWT+F+IYLHTRTNKNFE VNSAIVASMG
Sbjct: 235 LTIGILSGAVWANEAWGSYWNWDPKETWAFITWTLFSIYLHTRTNKNFESVNSAIVASMG 294

Query: 244 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 273
           FLIIWICYFGVNLLGIGLHSYGSFTLTSN
Sbjct: 295 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 321

[Close]

BLAST of Lsi06G000360 vs. Swiss-Prot
Match: CCSA_EUCGG (Cytochrome c biogenesis protein CcsA OS=Eucalyptus globulus subsp. globulus GN=ccsA PE=3 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 8.6e-121
Identity = 216/266 (81.20%), Postives = 236/266 (88.72%), Query Frame = 1


Query: 4   LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 63
           LLVTRWIY  H PLSDLYESL+FLSW FS+IH+  YFKK+KN+LS   ITAPSTIFTQGF
Sbjct: 55  LLVTRWIYSGHFPLSDLYESLIFLSWSFSVIHMVPYFKKHKNYLST--ITAPSTIFTQGF 114

Query: 64  ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 123
           ATSG LTEMHQS ++VPALQS WLMMHVSMM+LGYAALLCGSL SVAL+VIT +KAIR+F
Sbjct: 115 ATSGLLTEMHQSEIVVPALQSQWLMMHVSMMILGYAALLCGSLLSVALLVITLRKAIRVF 174

Query: 124 GKNNNFLNALFSFDEIQYMNEGNNFLRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 183
            K NNFLN  FSF EIQYMNE +N L  TSF SS+NYY++QLIQQLD WSYRIISLGF+F
Sbjct: 175 SKKNNFLNESFSFVEIQYMNERSNVLLTTSFCSSRNYYRAQLIQQLDQWSYRIISLGFLF 234

Query: 184 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 243
           L+IGILSGAVWANE WGSYWNWDPKETWAFITWT+FAIYLHTRTNKN+E  N AIVAS+G
Sbjct: 235 LTIGILSGAVWANEAWGSYWNWDPKETWAFITWTLFAIYLHTRTNKNWESFNCAIVASIG 294

Query: 244 FLIIWICYFGVNLLGIGLHSYGSFTL 270
           FLIIWICYFGVNLLGIGLHSYGSF L
Sbjct: 295 FLIIWICYFGVNLLGIGLHSYGSFNL 318

[Close]

BLAST of Lsi06G000360 vs. Swiss-Prot
Match: CCSA_MANES (Cytochrome c biogenesis protein CcsA OS=Manihot esculenta GN=ccsA PE=3 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 1.6e-119
Identity = 216/267 (80.90%), Postives = 233/267 (87.27%), Query Frame = 1


Query: 4   LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 63
           LLVTRWI+L HLPLSDLYESL+FLSW FSIIH+  YFKK+KN LS  AITAPST FTQGF
Sbjct: 55  LLVTRWIFLGHLPLSDLYESLIFLSWSFSIIHMVPYFKKHKNFLS--AITAPSTFFTQGF 114

Query: 64  ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 123
           ATSG LT+MHQS +LVPALQS WLMMHVSMM+LGYAALLCGSLFSVA +VITF+K IRIF
Sbjct: 115 ATSGLLTDMHQSEILVPALQSQWLMMHVSMMILGYAALLCGSLFSVAFLVITFRKIIRIF 174

Query: 124 GKNNNFLNALFSFDEIQYMNEGNNFLRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 183
            K+NN LN  F F EIQYM E  N LRN SF SS+NYY+ QLIQQLD W YRIIS+GFIF
Sbjct: 175 DKSNNLLNNSFFFSEIQYMAERKNVLRNISFLSSRNYYRFQLIQQLDDWGYRIISIGFIF 234

Query: 184 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 243
           L+IGILSGAVWANE WGSYWNWDPKETWAFITWTIFAIY H RTNK  EG +SAIVAS+G
Sbjct: 235 LTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYFHIRTNKKLEGFHSAIVASIG 294

Query: 244 FLIIWICYFGVNLLGIGLHSYGSFTLT 271
           FL+IWICYFGVNLLGIGLHSYGSFTLT
Sbjct: 295 FLLIWICYFGVNLLGIGLHSYGSFTLT 319

[Close]

BLAST of Lsi06G000360 vs. TrEMBL
Match: W8E717_9ROSI (Cytochrome c biogenesis protein CcsA OS=Cucumis hystrix GN=ccsA PE=3 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 2.0e-145
Identity = 262/269 (97.40%), Postives = 265/269 (98.51%), Query Frame = 1


Query: 4   LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 63
           LLVTRWIYLRHLPLSDLYESLLFLSW FSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF
Sbjct: 55  LLVTRWIYLRHLPLSDLYESLLFLSWAFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 114

Query: 64  ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 123
           ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF
Sbjct: 115 ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 174

Query: 124 GKNNNFLNALFSFDEIQYMNEGNNFLRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 183
            KNNN LNALFSF+EIQY+NEGN F+RNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF
Sbjct: 175 CKNNNLLNALFSFNEIQYINEGNYFVRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 234

Query: 184 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 243
           LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG
Sbjct: 235 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 294

Query: 244 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 273
           FLIIWICYFGVNLLGIGLHSYGSFTLTSN
Sbjct: 295 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 323

[Close]

BLAST of Lsi06G000360 vs. TrEMBL
Match: A0A0S2IF86_9ROSI (Cytochrome c biogenesis protein CcsA OS=Cucurbita cordata GN=ccsA PE=3 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 3.5e-145
Identity = 261/269 (97.03%), Postives = 264/269 (98.14%), Query Frame = 1


Query: 4   LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 63
           LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF
Sbjct: 55  LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 114

Query: 64  ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 123
           ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYA+LLCGSLFSVALIVITFQK+IRIF
Sbjct: 115 ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYASLLCGSLFSVALIVITFQKSIRIF 174

Query: 124 GKNNNFLNALFSFDEIQYMNEGNNFLRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 183
           GKNN+ LNALFSFDEIQYMNE NN LRNT FFSS NYYKSQLIQQLDHWSYRIISLGFIF
Sbjct: 175 GKNNHLLNALFSFDEIQYMNEENNVLRNTYFFSSNNYYKSQLIQQLDHWSYRIISLGFIF 234

Query: 184 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 243
           LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG
Sbjct: 235 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 294

Query: 244 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 273
           FLIIWICYFGVNLLGIGLHSYGSFTLTSN
Sbjct: 295 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 323

[Close]

BLAST of Lsi06G000360 vs. TrEMBL
Match: A0A0S2IEK8_9ROSI (Cytochrome c biogenesis protein CcsA OS=Cucurbita digitata GN=ccsA PE=3 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 3.5e-145
Identity = 261/269 (97.03%), Postives = 264/269 (98.14%), Query Frame = 1


Query: 4   LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 63
           LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF
Sbjct: 55  LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 114

Query: 64  ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 123
           ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYA+LLCGSLFSVALIVITFQK+IRIF
Sbjct: 115 ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYASLLCGSLFSVALIVITFQKSIRIF 174

Query: 124 GKNNNFLNALFSFDEIQYMNEGNNFLRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 183
           GKNN+ LNALFSFDEIQYMNE NN LRNT FFSS NYYKSQLIQQLDHWSYRIISLGFIF
Sbjct: 175 GKNNHLLNALFSFDEIQYMNEENNVLRNTYFFSSNNYYKSQLIQQLDHWSYRIISLGFIF 234

Query: 184 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 243
           LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG
Sbjct: 235 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 294

Query: 244 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 273
           FLIIWICYFGVNLLGIGLHSYGSFTLTSN
Sbjct: 295 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 323

[Close]

BLAST of Lsi06G000360 vs. TrEMBL
Match: G3ETU8_CUCME (Cytochrome c biogenesis protein CcsA OS=Cucumis melo subsp. melo GN=ccsA PE=3 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 4.6e-145
Identity = 261/269 (97.03%), Postives = 263/269 (97.77%), Query Frame = 1


Query: 4   LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 63
           LLVTRWIYLRHLPLSDLYESLLFLSW  SIIHLF Y KKYKNHLSVSAITAPSTIFTQGF
Sbjct: 55  LLVTRWIYLRHLPLSDLYESLLFLSWALSIIHLFAYLKKYKNHLSVSAITAPSTIFTQGF 114

Query: 64  ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 123
           ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF
Sbjct: 115 ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 174

Query: 124 GKNNNFLNALFSFDEIQYMNEGNNFLRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 183
           GKNNN LNALFSFDEIQY+NEGN F+RNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF
Sbjct: 175 GKNNNLLNALFSFDEIQYINEGNYFVRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 234

Query: 184 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 243
           LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG
Sbjct: 235 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 294

Query: 244 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 273
           FLIIWICYFGVNLLGIGLHSYGSFTLTSN
Sbjct: 295 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 323

[Close]

BLAST of Lsi06G000360 vs. TrEMBL
Match: A0A0S2IFN7_9ROSI (Cytochrome c biogenesis protein CcsA OS=Cucurbita foetidissima GN=ccsA PE=3 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 1.7e-144
Identity = 260/269 (96.65%), Postives = 262/269 (97.40%), Query Frame = 1


Query: 4   LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 63
           LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF
Sbjct: 55  LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 114

Query: 64  ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 123
           ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYA+LLCGSLFSVALIVITFQ +IRIF
Sbjct: 115 ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYASLLCGSLFSVALIVITFQNSIRIF 174

Query: 124 GKNNNFLNALFSFDEIQYMNEGNNFLRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 183
           GKNNN LNALFSFDEIQYMNE NN LRNT FFSS NYYKSQLIQQLDHWSYRIISLGFIF
Sbjct: 175 GKNNNLLNALFSFDEIQYMNEENNVLRNTYFFSSNNYYKSQLIQQLDHWSYRIISLGFIF 234

Query: 184 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 243
           LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLH RTNKNFEGVNSAIVASMG
Sbjct: 235 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHMRTNKNFEGVNSAIVASMG 294

Query: 244 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 273
           FLIIWICYFGVNLLGIGLHSYGSFTLTSN
Sbjct: 295 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 323

[Close]

BLAST of Lsi06G000360 vs. TAIR10
Match: ATCG01040.1 (ATCG01040.1 Cytochrome C assembly protein)

HSP 1 Score: 380.9 bits (977), Expect = 6.4e-106
Identity = 195/271 (71.96%), Postives = 224/271 (82.66%), Query Frame = 1


Query: 4   LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 63
           LL+TRWIY  H PLS+LYESL+FLSW FSIIH+ +YF K K    ++ ITAPS IF QGF
Sbjct: 57  LLLTRWIYSGHFPLSNLYESLIFLSWAFSIIHMVSYFNK-KQQNKLNTITAPSVIFIQGF 116

Query: 64  ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 123
           ATSG L +M QS +LVPALQS WLMMHVSMM+LGY ALLCGSL S+AL+VITF+K    F
Sbjct: 117 ATSGLLNKMPQSAILVPALQSQWLMMHVSMMILGYGALLCGSLLSIALLVITFRKVGPTF 176

Query: 124 GKNN---NFL-NALFSFDEIQYMNEGNNFL--RNTSFFSSKNYYKSQLIQQLDHWSYRII 183
            K N   NFL N LFSFD + Y+NE N+ L  +N +F  S+NYY+ QLIQQLD WS+RII
Sbjct: 177 WKKNIKKNFLLNELFSFDVLYYINERNSILLQQNINFSFSRNYYRYQLIQQLDFWSFRII 236

Query: 184 SLGFIFLSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSA 243
           SLGFIFL++GILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLH +TN+N  G+NSA
Sbjct: 237 SLGFIFLTVGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHIKTNRNVRGINSA 296

Query: 244 IVASMGFLIIWICYFGVNLLGIGLHSYGSFT 269
           IVA +GF++IWICYFGVNLLGIGLHSYGSFT
Sbjct: 297 IVALIGFILIWICYFGVNLLGIGLHSYGSFT 326

[Close]

BLAST of Lsi06G000360 vs. NCBI nr
Match: gi|590000461|ref|YP_009004090.1| (cytochrome c heme attachment protein [Cucumis hystrix])

HSP 1 Score: 523.1 bits (1346), Expect = 2.9e-145
Identity = 262/269 (97.40%), Postives = 265/269 (98.51%), Query Frame = 1


Query: 4   LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 63
           LLVTRWIYLRHLPLSDLYESLLFLSW FSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF
Sbjct: 55  LLVTRWIYLRHLPLSDLYESLLFLSWAFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 114

Query: 64  ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 123
           ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF
Sbjct: 115 ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 174

Query: 124 GKNNNFLNALFSFDEIQYMNEGNNFLRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 183
            KNNN LNALFSF+EIQY+NEGN F+RNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF
Sbjct: 175 CKNNNLLNALFSFNEIQYINEGNYFVRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 234

Query: 184 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 243
           LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG
Sbjct: 235 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 294

Query: 244 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 273
           FLIIWICYFGVNLLGIGLHSYGSFTLTSN
Sbjct: 295 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 323

[Close]

BLAST of Lsi06G000360 vs. NCBI nr
Match: gi|952954540|gb|ALO21901.1| (CcsA (plastid) [Cucurbita cordata])

HSP 1 Score: 522.3 bits (1344), Expect = 5.0e-145
Identity = 261/269 (97.03%), Postives = 264/269 (98.14%), Query Frame = 1


Query: 4   LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 63
           LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF
Sbjct: 55  LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 114

Query: 64  ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 123
           ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYA+LLCGSLFSVALIVITFQK+IRIF
Sbjct: 115 ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYASLLCGSLFSVALIVITFQKSIRIF 174

Query: 124 GKNNNFLNALFSFDEIQYMNEGNNFLRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 183
           GKNN+ LNALFSFDEIQYMNE NN LRNT FFSS NYYKSQLIQQLDHWSYRIISLGFIF
Sbjct: 175 GKNNHLLNALFSFDEIQYMNEENNVLRNTYFFSSNNYYKSQLIQQLDHWSYRIISLGFIF 234

Query: 184 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 243
           LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG
Sbjct: 235 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 294

Query: 244 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 273
           FLIIWICYFGVNLLGIGLHSYGSFTLTSN
Sbjct: 295 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 323

[Close]

BLAST of Lsi06G000360 vs. NCBI nr
Match: gi|346578243|ref|YP_004841834.1| (cytochrome c heme attachment protein [Cucumis melo subsp. melo])

HSP 1 Score: 521.9 bits (1343), Expect = 6.5e-145
Identity = 261/269 (97.03%), Postives = 263/269 (97.77%), Query Frame = 1


Query: 4   LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 63
           LLVTRWIYLRHLPLSDLYESLLFLSW  SIIHLF Y KKYKNHLSVSAITAPSTIFTQGF
Sbjct: 55  LLVTRWIYLRHLPLSDLYESLLFLSWALSIIHLFAYLKKYKNHLSVSAITAPSTIFTQGF 114

Query: 64  ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 123
           ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF
Sbjct: 115 ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 174

Query: 124 GKNNNFLNALFSFDEIQYMNEGNNFLRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 183
           GKNNN LNALFSFDEIQY+NEGN F+RNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF
Sbjct: 175 GKNNNLLNALFSFDEIQYINEGNYFVRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 234

Query: 184 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 243
           LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG
Sbjct: 235 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 294

Query: 244 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 273
           FLIIWICYFGVNLLGIGLHSYGSFTLTSN
Sbjct: 295 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 323

[Close]

BLAST of Lsi06G000360 vs. NCBI nr
Match: gi|952954704|gb|ALO22063.1| (CcsA (plastid) [Cucurbita ecuadorensis])

HSP 1 Score: 520.0 bits (1338), Expect = 2.5e-144
Identity = 260/269 (96.65%), Postives = 263/269 (97.77%), Query Frame = 1


Query: 4   LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 63
           LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF
Sbjct: 55  LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 114

Query: 64  ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 123
           ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYA+LLCGSLFSVALIVITFQ +IRIF
Sbjct: 115 ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYASLLCGSLFSVALIVITFQNSIRIF 174

Query: 124 GKNNNFLNALFSFDEIQYMNEGNNFLRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 183
           GKNN+ LNALFSFDEIQYMNE NN LRNT FFS KNYYKSQLIQQLDHWSYRIISLGFIF
Sbjct: 175 GKNNHLLNALFSFDEIQYMNEENNVLRNTYFFSYKNYYKSQLIQQLDHWSYRIISLGFIF 234

Query: 184 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 243
           LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG
Sbjct: 235 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 294

Query: 244 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 273
           FLIIWICYFGVNLLGIGLHSYGSFTLTSN
Sbjct: 295 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 323

[Close]

BLAST of Lsi06G000360 vs. NCBI nr
Match: gi|952954826|gb|ALO22183.1| (CcsA (plastid) [Cucurbita foetidissima])

HSP 1 Score: 520.0 bits (1338), Expect = 2.5e-144
Identity = 260/269 (96.65%), Postives = 262/269 (97.40%), Query Frame = 1


Query: 4   LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 63
           LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF
Sbjct: 55  LLVTRWIYLRHLPLSDLYESLLFLSWGFSIIHLFTYFKKYKNHLSVSAITAPSTIFTQGF 114

Query: 64  ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYAALLCGSLFSVALIVITFQKAIRIF 123
           ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYA+LLCGSLFSVALIVITFQ +IRIF
Sbjct: 115 ATSGFLTEMHQSPLLVPALQSHWLMMHVSMMVLGYASLLCGSLFSVALIVITFQNSIRIF 174

Query: 124 GKNNNFLNALFSFDEIQYMNEGNNFLRNTSFFSSKNYYKSQLIQQLDHWSYRIISLGFIF 183
           GKNNN LNALFSFDEIQYMNE NN LRNT FFSS NYYKSQLIQQLDHWSYRIISLGFIF
Sbjct: 175 GKNNNLLNALFSFDEIQYMNEENNVLRNTYFFSSNNYYKSQLIQQLDHWSYRIISLGFIF 234

Query: 184 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHTRTNKNFEGVNSAIVASMG 243
           LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLH RTNKNFEGVNSAIVASMG
Sbjct: 235 LSIGILSGAVWANETWGSYWNWDPKETWAFITWTIFAIYLHMRTNKNFEGVNSAIVASMG 294

Query: 244 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 273
           FLIIWICYFGVNLLGIGLHSYGSFTLTSN
Sbjct: 295 FLIIWICYFGVNLLGIGLHSYGSFTLTSN 323

The following BLAST results are available for this feature:

BLAST of Lsi06G000360 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CCSA_CUCSA	1.8e-147	97.40	Cytochrome c biogenesis protein CcsA OS=Cucumis sativus GN=ccsA PE=3 SV=1	[more]
CCSA_VITVI	4.0e-126	83.27	Cytochrome c biogenesis protein CcsA OS=Vitis vinifera GN=ccsA PE=3 SV=1	[more]
CCSA_MORIN	3.4e-125	83.64	Cytochrome c biogenesis protein CcsA OS=Morus indica GN=ccsA PE=3 SV=1	[more]
CCSA_EUCGG	8.6e-121	81.20	Cytochrome c biogenesis protein CcsA OS=Eucalyptus globulus subsp. globulus GN=c...	[more]
CCSA_MANES	1.6e-119	80.90	Cytochrome c biogenesis protein CcsA OS=Manihot esculenta GN=ccsA PE=3 SV=1	[more]

BLAST of Lsi06G000360 vs. TrEMBL


Match Name	E-value	Identity	Description
W8E717_9ROSI	2.0e-145	97.40	Cytochrome c biogenesis protein CcsA OS=Cucumis hystrix GN=ccsA PE=3 SV=1	[more]
A0A0S2IF86_9ROSI	3.5e-145	97.03	Cytochrome c biogenesis protein CcsA OS=Cucurbita cordata GN=ccsA PE=3 SV=1	[more]
A0A0S2IEK8_9ROSI	3.5e-145	97.03	Cytochrome c biogenesis protein CcsA OS=Cucurbita digitata GN=ccsA PE=3 SV=1	[more]
G3ETU8_CUCME	4.6e-145	97.03	Cytochrome c biogenesis protein CcsA OS=Cucumis melo subsp. melo GN=ccsA PE=3 SV...	[more]
A0A0S2IFN7_9ROSI	1.7e-144	96.65	Cytochrome c biogenesis protein CcsA OS=Cucurbita foetidissima GN=ccsA PE=3 SV=1	[more]

BLAST of Lsi06G000360 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG01040.1	6.4e-106	71.96	ATCG01040.1 Cytochrome C assembly protein	[more]

BLAST of Lsi06G000360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|590000461\|ref\|YP_009004090.1\|	2.9e-145	97.40	cytochrome c heme attachment protein [Cucumis hystrix]	[more]
gi\|952954540\|gb\|ALO21901.1\|	5.0e-145	97.03	CcsA (plastid) [Cucurbita cordata]	[more]
gi\|346578243\|ref\|YP_004841834.1\|	6.5e-145	97.03	cytochrome c heme attachment protein [Cucumis melo subsp. melo]	[more]
gi\|952954704\|gb\|ALO22063.1\|	2.5e-144	96.65	CcsA (plastid) [Cucurbita ecuadorensis]	[more]
gi\|952954826\|gb\|ALO22183.1\|	2.5e-144	96.65	CcsA (plastid) [Cucurbita foetidissima]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0020037	heme binding

Vocabulary: **Biological Process**
Term	Definition
GO:0017004	cytochrome complex assembly

Vocabulary: **INTERPRO**
Term	Definition
IPR017562	Cytochrome c-type biogenesis protein CcsA
IPR002541	Cyt_c_assembly

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0020037	heme binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G000360.1	Lsi06G000360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002541	Cytochrome c assembly protein	PFAM	PF01578	Cytochrom_C_asm	coord: 17..262 score: 6.4
IPR017562	Cytochrome c-type biogenesis protein CcsA	HAMAP	MF_01391	CytC_CcsA	coord: 1..268 score: 23
IPR017562	Cytochrome c-type biogenesis protein CcsA	TIGRFAMs	TIGR03144	TIGR03144	coord: 4..265 score: 6.8
None	No IPR available	PANTHER	PTHR30071	HEME EXPORTER PROTEIN C	coord: 166..272 score: 6.2E-151coord: 1..132 score: 6.2E
None	No IPR available	PANTHER	PTHR30071:SF8	CYTOCHROME C BIOGENESIS PROTEIN CCSA	coord: 166..272 score: 6.2E-151coord: 1..132 score: 6.2E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G000360	Cucumber (Gy14) v2	cgyblsiB055
Lsi06G000360	Cucumber (Gy14) v2	cgyblsiB073
Lsi06G000360	Melon (DHL92) v3.6.1	lsimedB418
Lsi06G000360	Cucumber (Chinese Long) v3	cuclsiB068
Lsi06G000360	Cucumber (Chinese Long) v3	cuclsiB086
Lsi06G000360	Watermelon (97103) v2	lsiwmbB365
Lsi06G000360	Wax gourd	lsiwgoB522
Lsi06G000360	Cucumber (Gy14) v1	cgylsiB033
Lsi06G000360	Cucumber (Gy14) v1	cgylsiB035
Lsi06G000360	Cucurbita maxima (Rimu)	cmalsiB076
Lsi06G000360	Cucurbita maxima (Rimu)	cmalsiB133
Lsi06G000360	Cucurbita maxima (Rimu)	cmalsiB142
Lsi06G000360	Cucurbita moschata (Rifu)	cmolsiB062
Lsi06G000360	Cucurbita moschata (Rifu)	cmolsiB122
Lsi06G000360	Cucurbita pepo (Zucchini)	cpelsiB302
Lsi06G000360	Cucurbita pepo (Zucchini)	cpelsiB560
Lsi06G000360	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G000360	Wild cucumber (PI 183967)	cpilsiB076
Lsi06G000360	Cucumber (Chinese Long) v2	culsiB058
Lsi06G000360	Cucumber (Chinese Long) v2	culsiB075
Lsi06G000360	Melon (DHL92) v3.5.1	lsimeB396
Lsi06G000360	Watermelon (Charleston Gray)	lsiwcgB364
Lsi06G000360	Watermelon (97103) v1	lsiwmB396