Lsi06G000260 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G000260
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	G patch domain-containing protein 8
Location	chr06 : 267133 .. 270910 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGTATGGTTTCGTGAAGGGGGAAATAGGGATATTAAGGATCCACTGGGAAGAGGAAGACCTGATTGCCCAAAGACCCCCAACACTACAACCCTTCTGCTTTCGGAGGTTATTTTCTTGACAAAACCTTCAAACTTTCAGGTTTATTTAATAAAGCTCATAATTGTGCTGAAGGTTAAATTAAAGCAACCGCATAATGAAATAACCAAAAAATACAATTTTTTTAACCAACTTCAAGGTTATCCTTGCTTGAGATTCTGTTCTATACATCTGTTTTACTAGCAACTTGCTAGTGCTACAATTTTGGTGTTCCTGGGATATAATAACCATGGGTTTGTCCATTTGGCCATTGGGTCAACTCATGATGAATATTTTGAAATCCATCGATAAAATTGGTCGGTTTGTTCTTTTTCATGTTTACAGTTTTGGTGAAGTCCTATGTAGAAAGTAGAAACACACTAGGGTGCTTTTGGTGAAGTGGATGTGACATGTTCTTCTCACTCAATCATTTTCATTTTTATTTTAGAACTTTTTAACTTATTATCTTGTGCTTCAAATTTCTATTTGTAATTGTAATGGTTTTACCTAACCATATGATATAGGCAATACAAATGGATTATCGGGGTTACAGTAGTAGACTGGAAACAAACAACCCAAATAAAGGCTATGCTCAGGAGCAGGTATGAATAAGTGATCATGTCAAACTGGAAACACCCAACATACGTCTATATAACCATCTGAATTACTGAACTTCACTTCCCTTTTTTAAAAATATATAATAATAATAATAAAATAATAGGAATTATGGTTTTTGTGATATCTAATGTTTCACATATTTCTGTCTTTGGTGGGAATATTAGGGATCCCTTGCTGATGACTTTATAGATGATTTTCGCTTGCCCATTAACCATAAACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCATTGGACACACAATTAACTTCATCAAATGTGGGATATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGGAAGGATGAGCAAGGTATTGTGCTTTCTGGATATGAAATCCTGCTCTGTTCATTCATTGTGCAATCTGTCTCTTAGTGTAGTATTTTCTATAATTTTTCTCATGAACCTTAGATTCTCTAAGTGTTTACTGGTCTACTCTTTGCTTTCCCTCAAAGCCCCTTGCATGCAAATGTCATCCGTTTGCTTTATATTTCATTCTGAACATGAGTATGACTCATTTGGTAGTGGTACCTGATATGGCAAGAAGATAGAGTTCTATTTTTAAAATCAACTTGTGCTCGTTCTATTTTACAATCTTTTAACTACTTGTCTTTCCTCTGTTCCTTGTAATTCTTAACTAAATTACTCTCATGACCATATTTGAACAAGATTTATTCTATAGGTCGTACTACTATTGTGTCCTTGAATTCTGGGAACAGAATTACCCTGTTGCTCGATTTATATATTTTTTCTGAGTTTCTTTGAAATCGCACACCAGATCATTAACATAAGAGAACATCTATTACTTAGTTGGAACTTGAGTTCCTTGTTTTTTGAAATTAATGCAATCGCGTCAAGTATGAGTGTAATGATTGCCCATGCTCAGTTTGTCCACCGAGTATAATAAATGGAAGAATCCTCTAAAACTCCAATGGTTTAAGATATTTGGGCATGTTTAAAGTTGTCCATTTAAAAACAGTTCTAATTTAAAAGCAGAAATATATCTCTAATTTAGATACTTTTTAGAAGTAGAAACTCATATCTGAGCCAATAAAATCTAGCATTATGAAAATAATAGGAACTTGTGTTGGTTTGTGTAGGAATTATTGAGCCAATAAAATCTGGAATGAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGATGATTTTTTCACTGCAGAAGAAAATATCCAGCGGAAAAAACTTGATGTCGAGGTGGAAGAGACAGAAGAACATGCCAAAAAACGGGAGGTACATTATTTTTATCAATACAATTAGTTGGGAAAAATGAATAATTATTAGCTAAGACTTTGAGGTTGATGCTTTCCTCTTTCTGAAACTCATATCAAATAGCAGAAGGCAGCATATAGCATATATGCATGTCTTTTAGCGGGAATGGTATATCATAGGGGACCATCAACTTTGGAAGGTCTTCAGATTTTCCTGCAGTTTTTATTACCTGGTGGCTTCTACTGCCCGCTTCGTGCACATTATGAAAATCCAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTCAAAGAAATACGCAAGGTTTTCTATTGTGATCTTTGCAACAAACAGTACAAATTGGCAATGGAATTTGAAGCTCATCTCAGCTCATATGATCATAATCATAGAAAGGTAGGAAATTAAGAGTTTTTCTCTTAAGTAGTCCCTATAGCAAAATCATCGTTCTCCTTTCTTTCTTTGGATGTCCTTTGAAGTTGCATTGAATCTAAAGCATTGTTGGATGACATTGCAGCGTTTTAAAGAAATGAGAGAAATGCATGGTTCAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACGTGAAGAGAGAGAGATGGCAAAATTTGCTCAAATGTATCTCTCTTTTTCATGATGTGATTCCCATTATCAGTTTCTCTTTATGTTTTCATTTTGTGTGATTTTGTTTATATTTTTTTTTCATGTTAAAATAGTGCAGATGCCCGGAAGAAGCAGCAGCAGATGCTGGAGCAAAAAGAAAAAGCAGTCGAGGCTCCTGTTTCAACTGAACTTAGAAATGCTACATCACTTGCAGATCAGGATCAGCGGAAAACATTAAAATTTGGATTCTCTTCTAAAGGTGGCACCTCGAAGGTAAAGCTATAGCCATAATGAAATTACAATCACAAACTGTCATTCTTTGTTTATAACATCTATTTGTAATCGATTCTGAATTTTTTTATTTTTTTATTACCATCGATTCTAAAATTAATTGGGGCTTGATTGCTCATTCTAAAGGTGCCACCCATCTACATGATGAGTAATGATAATGAAGTATCTGGTACATCTTTTGGAGTGTTTAGAATTCAATAAGTAACCAGTTAGCAGAATATCCAGTTCCCATCAGAGCAAAGCAGCACTATTGGCATTATTGGCAGCTCACATGTCCGTTCCATGTTTGGAACTTATCAAAGCATGGCTCGTGCTTTCATCTTTCTGCTTAGGATAGAATTTGTCTTCTTCATGGTATTTAGTAGTAATAGGAATTGAAAACTCCTCTCTAATTTCTTCCCGACTCATGTTATTGCAGAACATATTTGGTGGAGCCACAAAGAAACCGAAAGTAGCACCTGTAGCTTCAGTTTTCGGGAATGATAGCGATGACGAATTGTAAAACAGTGCCCAAGTTGCCATCTTGTATCAGCATTTTGAGGTTGTATCTGTATCTTTAAGTTGAATTCATGTAATCTCATGCCAGTAGATATTCTTGTTTAAACACGTTACTCGCTATTAGACTGTTAATTCATGTATCAGCTACAAGTCTGGTGTCGAATCTTGTTTCAAGCCAAGTGATTTAGTCTGGTGAAGAGATATCCATACAAGTATCATACTTGATATCCATACAAGTATCATACTCCAGACAATATCCTTAGTTATAGACAAACTTGTAGTTCTGATATGTTCTGTTATTATAACTATGAGACTAGATAATATTGTAATCTTAAACCATTGTCAAAGTTTATCATATCGTAAGTCTTGAGAATATGTATTTATACTGCC

mRNA sequence

ATGAAAGTATGGTTTCGTGAAGGGGGAAATAGGGATATTAAGGATCCACTGGGAAGAGGAAGACCTGATTGCCCAAAGACCCCCAACACTACAACCCTTCTGCTTTCGGAGGCAATACAAATGGATTATCGGGGTTACAGTAGTAGACTGGAAACAAACAACCCAAATAAAGGCTATGCTCAGGAGCAGGGATCCCTTGCTGATGACTTTATAGATGATTTTCGCTTGCCCATTAACCATAAACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCATTGGACACACAATTAACTTCATCAAATGTGGGATATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGGAAGGATGAGCAAGGAATTATTGAGCCAATAAAATCTGGAATGAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGATGATTTTTTCACTGCAGAAGAAAATATCCAGCGGAAAAAACTTGATGTCGAGGTGGAAGAGACAGAAGAACATGCCAAAAAACGGGAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTCAAAGAAATACGCAAGGTTTTCTATTGTGATCTTTGCAACAAACAGTACAAATTGGCAATGGAATTTGAAGCTCATCTCAGCTCATATGATCATAATCATAGAAAGCGTTTTAAAGAAATGAGAGAAATGCATGGTTCAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACATGCCCGGAAGAAGCAGCAGCAGATGCTGGAGCAAAAAGAAAAAGCAGTCGAGGCTCCTGTTTCAACTGAACTTAGAAATGCTACATCACTTGCAGATCAGGATCAGCGGAAAACATTAAAATTTGGATTCTCTTCTAAAGGTGGCACCTCGAAGAACATATTTGGTGGAGCCACAAAGAAACCGAAAGTAGCACCTGTAGCTTCAGTTTTCGGGAATGATAGCGATGACGAATTGTAAAACAGTGCCCAAGTTGCCATCTTGTATCAGCATTTTGAGGTTGTATCTGTATCTTTAAGTTGAATTCATGTAATCTCATGCCAGTAGATATTCTTGTTTAAACACGTTACTCGCTATTAGACTGTTAATTCATGTATCAGCTACAAGTCTGGTGTCGAATCTTGTTTCAAGCCAAGTGATTTAGTCTGGTGAAGAGATATCCATACAAGTATCATACTTGATATCCATACAAGTATCATACTCCAGACAATATCCTTAGTTATAGACAAACTTGTAGTTCTGATATGTTCTGTTATTATAACTATGAGACTAGATAATATTGTAATCTTAAACCATTGTCAAAGTTTATCATATCGTAAGTCTTGAGAATATGTATTTATACTGCC

Coding sequence (CDS)

ATGAAAGTATGGTTTCGTGAAGGGGGAAATAGGGATATTAAGGATCCACTGGGAAGAGGAAGACCTGATTGCCCAAAGACCCCCAACACTACAACCCTTCTGCTTTCGGAGGCAATACAAATGGATTATCGGGGTTACAGTAGTAGACTGGAAACAAACAACCCAAATAAAGGCTATGCTCAGGAGCAGGGATCCCTTGCTGATGACTTTATAGATGATTTTCGCTTGCCCATTAACCATAAACCAACAGAAAATGTTGATCTTGATAATGTGGAACAAGCATCATTGGACACACAATTAACTTCATCAAATGTGGGATATAGGCTTCTCCAGAAGATGGGCTGGAAAGGGAAGGGACTAGGGAAGGATGAGCAAGGAATTATTGAGCCAATAAAATCTGGAATGAGAGATCCCAAACTAGGAATTGGAAAACAAGAAGAAGATGATTTTTTCACTGCAGAAGAAAATATCCAGCGGAAAAAACTTGATGTCGAGGTGGAAGAGACAGAAGAACATGCCAAAAAACGGGAGGTTTTAGCAGAACGTGAGGAGAAAATTCAAACTGAGGTCAAAGAAATACGCAAGGTTTTCTATTGTGATCTTTGCAACAAACAGTACAAATTGGCAATGGAATTTGAAGCTCATCTCAGCTCATATGATCATAATCATAGAAAGCGTTTTAAAGAAATGAGAGAAATGCATGGTTCAAGCAGCCGAGATGACAGAAACAAGCGGGAACAGCAACATGCCCGGAAGAAGCAGCAGCAGATGCTGGAGCAAAAAGAAAAAGCAGTCGAGGCTCCTGTTTCAACTGAACTTAGAAATGCTACATCACTTGCAGATCAGGATCAGCGGAAAACATTAAAATTTGGATTCTCTTCTAAAGGTGGCACCTCGAAGAACATATTTGGTGGAGCCACAAAGAAACCGAAAGTAGCACCTGTAGCTTCAGTTTTCGGGAATGATAGCGATGACGAATTGTAA

Protein sequence

MKVWFREGGNRDIKDPLGRGRPDCPKTPNTTTLLLSEAIQMDYRGYSSRLETNNPNKGYAQEQGSLADDFIDDFRLPINHKPTENVDLDNVEQASLDTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEENIQRKKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMREMHGSSSRDDRNKREQQHARKKQQQMLEQKEKAVEAPVSTELRNATSLADQDQRKTLKFGFSSKGGTSKNIFGGATKKPKVAPVASVFGNDSDDEL

Homology

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BLAST of Lsi06G000260 vs. Swiss-Prot
Match: GPTC8_MOUSE (G patch domain-containing protein 8 OS=Mus musculus GN=Gpatch8 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.4e-26
Identity = 78/214 (36.45%), Postives = 136/214 (63.55%), Query Frame = 1


Query: 91  VEQASLDTQLTSSNVGYRLLQKMGWK-GKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDD 150
           +EQASLD  + S N+G+RLLQK GWK G+GLGK  QG  +PI   ++   +G+G+ E + 
Sbjct: 29  IEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMGRMEMEL 88

Query: 151 FFTAEENIQRKKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLA 210
            +  +   +R+ L+VE E+TEE  +K +   ++E+ I   ++++R  FYC+LC+KQY+  
Sbjct: 89  DYAEDATERRRVLEVEKEDTEELRQKYKDYVDKEKAIAKALEDLRANFYCELCDKQYQKH 148

Query: 211 MEFEAHLSSYDHNHRKRFKEMRE---MHGSSSRDDRNKREQQHARKKQQQMLEQKEKAVE 270
            EF+ H++SYDH H++R K++++       SSR  +++++Q+ A ++  ++ EQ+++A  
Sbjct: 149 QEFDNHINSYDHAHKQRLKDLKQREFARNVSSRSRKDEKKQEKALRRLHELAEQRKQAEC 208

Query: 271 APVSTELRNATSLA-DQDQRKTLKFGFSSKGGTS 300
           AP S  +   T++A D+D  +  K   S+  G S
Sbjct: 209 APGSGPMFRPTTVAVDEDGGEEDKDESSTNSGAS 242

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BLAST of Lsi06G000260 vs. Swiss-Prot
Match: GPTC8_HUMAN (G patch domain-containing protein 8 OS=Homo sapiens GN=GPATCH8 PE=1 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-25
Identity = 78/221 (35.29%), Postives = 137/221 (61.99%), Query Frame = 1


Query: 91  VEQASLDTQLTSSNVGYRLLQKMGWK-GKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDD 150
           +EQASLD  + S N+G+RLLQK GWK G+GLGK  QG  +PI   ++   +G+G+ E + 
Sbjct: 29  IEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMGRMEMEL 88

Query: 151 FFTAEENIQRKKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLA 210
            +  +   +R+ L+VE E+TEE  +K +   ++E+ I   ++++R  FYC+LC+KQY+  
Sbjct: 89  DYAEDATERRRVLEVEKEDTEELRQKYKDYVDKEKAIAKALEDLRANFYCELCDKQYQKH 148

Query: 211 MEFEAHLSSYDHNHRKRFKEMRE---MHGSSSRDDRNKREQQHARKKQQQMLEQKEKAVE 270
            EF+ H++SYDH H++R K++++       SSR  +++++Q+ A ++  ++ EQ+++A  
Sbjct: 149 QEFDNHINSYDHAHKQRLKDLKQREFARNVSSRSRKDEKKQEKALRRLHELAEQRKQAEC 208

Query: 271 APVSTELRNATSLADQDQRKTLKFGFSSKGGTSKNIFGGAT 308
           AP S  +   T++A  ++      G   K  ++ N   GAT
Sbjct: 209 APGSGPMFKPTTVAVDEEG-----GEDDKDESATNSGTGAT 244

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BLAST of Lsi06G000260 vs. Swiss-Prot
Match: Z804A_MOUSE (Zinc finger protein 804A OS=Mus musculus GN=Znf804a PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.3e-06
Identity = 37/118 (31.36%), Postives = 73/118 (61.86%), Query Frame = 1


Query: 180 AEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMRE---MHGS 239
           AE+E  I   +++++  FYC+LC+KQY    EF+ H++SYDH H++R KE+++       
Sbjct: 40  AEKENTIAKALEDLKANFYCELCDKQYYKHQEFDNHINSYDHAHKQRLKELKQREFARNV 99

Query: 240 SSRDDRNKREQQHARKKQQQMLEQKEKAVEAPVSTELRNAT------SLADQDQRKTL 289
           +S+  +++R+Q+ A ++  ++ E +++ V AP S  +  +T      +L D  QR+++
Sbjct: 100 ASKSRKDERKQEKALQRLHKLAELRKETVCAPGSGPMFKSTTVTVRENLNDVSQRESV 157

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BLAST of Lsi06G000260 vs. Swiss-Prot
Match: Z804A_HUMAN (Zinc finger protein 804A OS=Homo sapiens GN=ZNF804A PE=1 SV=3)

HSP 1 Score: 55.5 bits (132), Expect = 1.3e-06
Identity = 33/103 (32.04%), Postives = 67/103 (65.05%), Query Frame = 1


Query: 180 AEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKEMRE---MHGS 239
           AE+E  I   +++++  FYC+LC+KQY    EF+ H++SYDH H++R KE+++       
Sbjct: 40  AEKENTIAKALEDLKANFYCELCDKQYYKHQEFDNHINSYDHAHKQRLKELKQREFARNV 99

Query: 240 SSRDDRNKREQQHARKKQQQMLEQKEKAVEAPVSTELRNATSL 280
           +S+  +++R+Q+ A ++  ++ E +++ V AP S  +  +T++
Sbjct: 100 ASKSRKDERKQEKALQRLHKLAELRKETVCAPGSGPMFKSTTV 142

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BLAST of Lsi06G000260 vs. TrEMBL
Match: A0A0A0LW54_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560720 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 5.7e-142
Identity = 271/299 (90.64%), Postives = 280/299 (93.65%), Query Frame = 1


Query: 41  MDYRGYSSRLETNNPNKGYAQEQGSLADDFIDDFRLPINHKPTENVDLDNVEQASLDTQL 100
           MDYRG+SSRLET+NP+KGYA+EQ SL DDFIDDFRLPINHKPTENVDLDNVEQASLDTQL
Sbjct: 1   MDYRGFSSRLETSNPSKGYAREQESLGDDFIDDFRLPINHKPTENVDLDNVEQASLDTQL 60

Query: 101 TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEENIQRK 160
           TSSNVGYRLLQKMGWKGKGLGK+EQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEENIQRK
Sbjct: 61  TSSNVGYRLLQKMGWKGKGLGKNEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEENIQRK 120

Query: 161 KLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD 220
           KLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD
Sbjct: 121 KLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD 180

Query: 221 HNHRKRFKEMREMHGSSSRDDRNKREQQH-------------ARKKQQQMLEQKEKAVEA 280
           HNHRKRFKEMREMHGSSSRDDRNKREQQ              ARKKQQQ+LEQ+ +A EA
Sbjct: 181 HNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKQQQLLEQQARAAEA 240

Query: 281 PVSTELRNATSLADQDQRKTLKFGFSSKGGTSKNIFGGATKKPKVAPVASVFGNDSDDE 327
           PVSTELRNATS+ADQDQRKTLKFGFSSKGGTSKNIFGGA KKPKVAPVASVFGNDSDDE
Sbjct: 241 PVSTELRNATSVADQDQRKTLKFGFSSKGGTSKNIFGGAKKKPKVAPVASVFGNDSDDE 299

[Close]

BLAST of Lsi06G000260 vs. TrEMBL
Match: M5WC31_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009173mg PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.4e-111
Identity = 224/305 (73.44%), Postives = 250/305 (81.97%), Query Frame = 1


Query: 41  MDYRGYSSRLET----NNPNKGYAQEQGSLADDFIDDFRLPINHKPTENVDLDNVEQASL 100
           M YR Y  R ET    N PN+     Q SL DD  ++FRLPINH+PTENV+L+NVEQASL
Sbjct: 1   MAYR-YKGRQETSTRGNQPNEKDQAYQDSLVDDLAEEFRLPINHRPTENVNLENVEQASL 60

Query: 101 DTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEEN 160
           DT + SSN+G+RLLQKMGWKGKGLGKDEQGI EPIKSG+RDPKLG+GKQEEDD+FTAEEN
Sbjct: 61  DTHIASSNIGFRLLQKMGWKGKGLGKDEQGITEPIKSGIRDPKLGVGKQEEDDYFTAEEN 120

Query: 161 IQRKKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHL 220
           IQR+KLDVE+EETEEHAKKREVLAERE+KIQTEVKEI KVFYCDLCNKQYKLA+EFEAHL
Sbjct: 121 IQRRKLDVEIEETEEHAKKREVLAEREQKIQTEVKEIHKVFYCDLCNKQYKLAVEFEAHL 180

Query: 221 SSYDHNHRKRFKEMREMHGSSSRDDRNKREQQHARK---------------KQQQMLEQK 280
           SSYDHNHRKRFKEM+EMHGSSSRDDR KREQQ   K               +QQQ  +Q+
Sbjct: 181 SSYDHNHRKRFKEMKEMHGSSSRDDRQKREQQRQEKEMAKFVQIADARKQQQQQQQQQQE 240

Query: 281 EKAVEAPVSTELRNATSLADQDQRKTLKFGFSSKGGTSKNIFGGATKKPKVAPVASVFGN 327
           E++  AP STEL +AT+LADQDQRK LKFGFSSKGGTSK+ F    KKPKV PVASVFGN
Sbjct: 241 EESGSAPASTELTSATTLADQDQRKALKFGFSSKGGTSKSSFSSVAKKPKV-PVASVFGN 300

[Close]

BLAST of Lsi06G000260 vs. TrEMBL
Match: A0A061F535_THECC (D111/G-patch domain-containing protein OS=Theobroma cacao GN=TCM_026841 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 6.8e-111
Identity = 227/304 (74.67%), Postives = 250/304 (82.24%), Query Frame = 1


Query: 41  MDYRGYSSRLETNNPNKGYAQE----QGSLADDFIDDFRLPINHKPTENVDLDNVEQASL 100
           MDYR Y+S  ETN  +K   Q+    Q SL +D  +DFRLPINHKPTENVDL+NVEQA+L
Sbjct: 1   MDYRRYNSAQETNIRDKQQQQDDLAYQDSLIEDLAEDFRLPINHKPTENVDLENVEQATL 60

Query: 101 DTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEEN 160
           DT+L SSN+G+RLLQKMGWKGKGLGKDEQGI EPI+SG+RDPKLGIGKQEEDDFFTAEEN
Sbjct: 61  DTRLNSSNIGFRLLQKMGWKGKGLGKDEQGITEPIRSGIRDPKLGIGKQEEDDFFTAEEN 120

Query: 161 IQRKKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHL 220
           IQR+KLD+EVEETEEHAKKREVLAERE+KIQTEVKEIRKVFYC+LCNKQYKLAMEFE HL
Sbjct: 121 IQRRKLDIEVEETEEHAKKREVLAEREQKIQTEVKEIRKVFYCELCNKQYKLAMEFEVHL 180

Query: 221 SSYDHNHRKRFKEMREMHGSSSRDDRNKREQQH-------------ARKKQQQMLEQKEK 280
           SSYDHNHRKRFKEMREMHG SSRDDR KREQQ              ARK+QQ++ E+   
Sbjct: 181 SSYDHNHRKRFKEMREMHGGSSRDDRQKREQQRQEKEMAKFAQMAGARKQQQELPEESGP 240

Query: 281 AV-EAPVSTELRNATSLADQDQRKTLKFGFSSKGGTSKNIFGGATKKPKVAPVASVFGND 327
           A+  APV+     AT+LADQDQRK LKFGFSSK  TSKN FG A KKPK  PVASVFGND
Sbjct: 241 AIASAPVT-----ATALADQDQRKALKFGFSSKTSTSKNAFGNAAKKPKF-PVASVFGND 298

[Close]

BLAST of Lsi06G000260 vs. TrEMBL
Match: U5GCU7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s00450g PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 2.2e-109
Identity = 219/296 (73.99%), Postives = 247/296 (83.45%), Query Frame = 1


Query: 41  MDYRGYSSRLETNNPNKGY-AQEQGSLADDFIDDFRLPINHKPTENVDLDNVEQASLDTQ 100
           MD R YS + ET+  NK    +EQ SL +DF +DFRLP +H+PTENVDLDNVEQASLDT+
Sbjct: 1   MDRRWYSDKQETSTHNKQQLVREQDSLIEDFTEDFRLPKDHRPTENVDLDNVEQASLDTK 60

Query: 101 LTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEENIQR 160
           LT+SN+G+RLLQKMGWKGKGLGKDEQGIIEPIKSG+RDPKLGIGKQEEDDFFTAEENIQR
Sbjct: 61  LTASNIGFRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPKLGIGKQEEDDFFTAEENIQR 120

Query: 161 KKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSY 220
           +KLD+EVEETEEH KKREVLAERE+KIQTEVKEIRKVF+CDLCNKQYKLAMEFEAHLSSY
Sbjct: 121 RKLDIEVEETEEHTKKREVLAEREQKIQTEVKEIRKVFFCDLCNKQYKLAMEFEAHLSSY 180

Query: 221 DHNHRKRFKEMREMHGSSSRDDRNKREQQHARKKQQQML---------EQKEKAVEAPVS 280
           DHNHRKRFKEMREMHG+SSRDDR KRE Q   ++  +           +Q+E++  A VS
Sbjct: 181 DHNHRKRFKEMREMHGTSSRDDRRKRELQRQEREMAKFAQMADAHKQEQQQEESASAQVS 240

Query: 281 TELRNATSLADQDQRKTLKFGFSSKGGTSKNIFGGATKKPKVAPVASVFGNDSDDE 327
           T LR+ T+L DQDQR+ LKFGFSSKGG SKN    A KKPK A VASVF NDSD+E
Sbjct: 241 TSLRSGTALVDQDQRRALKFGFSSKGGLSKNSSAKAAKKPKSA-VASVFSNDSDEE 295

[Close]

BLAST of Lsi06G000260 vs. TrEMBL
Match: A0A0D2W826_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G210000 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 1.1e-108
Identity = 226/310 (72.90%), Postives = 246/310 (79.35%), Query Frame = 1


Query: 41  MDYRGYSSRLETNNPNKGYAQE----QGSLADDFIDDFRLPINHKPTENVDLDNVEQASL 100
           MDYR Y+S    N   K    E    Q SL +D  +DFRLPINHKPTENVDLDNV+QA+L
Sbjct: 1   MDYRRYNSSQGANLGTKQQISEEQAYQDSLVEDLAEDFRLPINHKPTENVDLDNVQQATL 60

Query: 101 DTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEEN 160
           DT+L SSNVG+RLLQKMGWKGKGLGKDEQGIIEPI+SG+RDPKLGIGKQEEDDFFTAEEN
Sbjct: 61  DTKLNSSNVGFRLLQKMGWKGKGLGKDEQGIIEPIRSGIRDPKLGIGKQEEDDFFTAEEN 120

Query: 161 IQRKKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHL 220
           IQR+KLD+EVEETEEHAKKREVLAERE+KIQTEVKEIRKVFYC+LCNKQYKLAMEFE HL
Sbjct: 121 IQRRKLDIEVEETEEHAKKREVLAEREQKIQTEVKEIRKVFYCELCNKQYKLAMEFEVHL 180

Query: 221 SSYDHNHRKRFKEMREMHGSSSRDDRNKREQQH-------------ARKKQQQMLEQKEK 280
           SSYDHNHRKRFKEMREMHGSSSRDDR KREQQ              ARK+QQQ   ++  
Sbjct: 181 SSYDHNHRKRFKEMREMHGSSSRDDRQKREQQRQEREMAKFAQMAGARKQQQQESREESG 240

Query: 281 AVEAPVSTEL-------RNATSLADQDQRKTLKFGFSSKGGTSKNIFGGATKKPKVAPVA 327
              AP S+           AT+LADQ+QRKTLKFGFSSK  +SKN  G A KKPKVA VA
Sbjct: 241 PATAPASSPAPAPAPAPAIATALADQEQRKTLKFGFSSKSSSSKNASGSAVKKPKVA-VA 300

[Close]

BLAST of Lsi06G000260 vs. TAIR10
Match: AT5G26610.1 (AT5G26610.1 D111/G-patch domain-containing protein)

HSP 1 Score: 334.3 bits (856), Expect = 8.2e-92
Identity = 190/302 (62.91%), Postives = 230/302 (76.16%), Query Frame = 1


Query: 41  MDYRGYSSRLETNNPNKGYAQE----QGSLADDFIDDFRLPINHKPTENVDLDNVEQASL 100
           MD     S+ E ++  K   ++    Q S  +   ++FRLPI H+ TENVDL++VEQASL
Sbjct: 1   MDISRRESKTEASSREKRIYEKDQMNQESFIEGLAEEFRLPITHRVTENVDLEDVEQASL 60

Query: 101 DTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEEN 160
           D +++SSNVG+RLLQKMGWKGKGLGK EQGI EPIKSG+RD +LG+GKQEEDD+FTAEEN
Sbjct: 61  DVKISSSNVGFRLLQKMGWKGKGLGKQEQGITEPIKSGIRDRRLGLGKQEEDDYFTAEEN 120

Query: 161 IQRKKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHL 220
           IQRKKLD+E+EETEE AKKREVLAERE+KIQ++VKEIRKVFYC+LC+KQY+  MEFE HL
Sbjct: 121 IQRKKLDIEIEETEEIAKKREVLAEREQKIQSDVKEIRKVFYCELCSKQYRTVMEFEGHL 180

Query: 221 SSYDHNHRKRFKEMREMHGSSSRDDRNKREQQH----------ARKKQQQMLEQKEKAVE 280
           SSYDHNH+KRFKEM+EMHG+S RD+R KREQQ           ARK+ Q    Q+E    
Sbjct: 181 SSYDHNHKKRFKEMKEMHGASGRDERKKREQQRQEREMTKMADARKQHQMQQSQQEVPEN 240

Query: 281 APVSTELRNATS-LADQDQRKTLKFGFSSKGG-TSKNIFGGATKKPKVAPVASVFGNDSD 327
            PVS   +   + LA QDQRKTLKFGFSSK G  SK+    + KKPKVA +ASVFGNDSD
Sbjct: 241 VPVSAPAKTTVAPLAVQDQRKTLKFGFSSKSGIISKSQPTSSIKKPKVA-IASVFGNDSD 300

[Close]

BLAST of Lsi06G000260 vs. TAIR10
Match: AT3G52350.1 (AT3G52350.1 D111/G-patch domain-containing protein)

HSP 1 Score: 50.4 bits (119), Expect = 2.4e-06
Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = 1


Query: 85  NVDLDNVEQASLDTQLTSSNVGYRLLQKMGWK-GKGLGKDEQGIIEPIKSGMRDPKLGIG 144
           NV  D+ E ++  T ++SSN+G++LL+K GWK G GLG  EQGI+ P+++  +  K G+G
Sbjct: 62  NVIGDSSESSNPSTAISSSNIGFQLLKKHGWKEGTGLGITEQGILVPLQAEPKHNKQGLG 121

Query: 145 KQEEDDFFTAEENIQRKKLDVEVEETEEHAKKREVLAEREEKIQTEVKEI 194
                    AE+  +RK    +    EE +KK + L+++  K+    K +
Sbjct: 122 ---------AEKPAKRKPAQPQDTAFEEVSKKSKKLSKKLVKMIEHEKRL 162

[Close]

BLAST of Lsi06G000260 vs. TAIR10
Match: AT1G17070.1 (AT1G17070.1 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain)

HSP 1 Score: 48.5 bits (114), Expect = 9.0e-06
Identity = 35/103 (33.98%), Postives = 60/103 (58.25%), Query Frame = 1


Query: 101 TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAE----EN 160
           ++  +G +LL+KMG+KG GLGK++QGI+ PI++ +R   +G+G    +DF  A+    + 
Sbjct: 199 STKGIGMKLLEKMGYKGGGLGKNQQGIVAPIEAQLRPKNMGMG---YNDFKEAKLPDLKK 258

Query: 161 IQRKK-LDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFY 199
           ++ KK + V V E E+         +R  K   + K++RK  Y
Sbjct: 259 VEEKKIIGVSVSENEQSH------GDRGGKNLWKKKKVRKAVY 292

[Close]

BLAST of Lsi06G000260 vs. NCBI nr
Match: gi|659099268|ref|XP_008450514.1| (PREDICTED: G patch domain-containing protein 8 [Cucumis melo])

HSP 1 Score: 513.5 bits (1321), Expect = 2.8e-142
Identity = 271/300 (90.33%), Postives = 281/300 (93.67%), Query Frame = 1


Query: 40  QMDYRGYSSRLETNNPNKGYAQEQGSLADDFIDDFRLPINHKPTENVDLDNVEQASLDTQ 99
           +M+YRG+SSRLETNNP+KGYA+EQ SL DDFIDDFRLPINHKPTENVDLDNVEQASLDTQ
Sbjct: 61  KMEYRGFSSRLETNNPSKGYAREQESLGDDFIDDFRLPINHKPTENVDLDNVEQASLDTQ 120

Query: 100 LTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEENIQR 159
           LTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEENIQR
Sbjct: 121 LTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEENIQR 180

Query: 160 KKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSY 219
           KKLDVEVEETEEHAKK EVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSY
Sbjct: 181 KKLDVEVEETEEHAKKTEVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSY 240

Query: 220 DHNHRKRFKEMREMHGSSSRDDRNKREQQH-------------ARKKQQQMLEQKEKAVE 279
           DHNHRKRFKEMREMHGSSSRDDRNKREQQ              ARKKQQQ+LEQ+E+A E
Sbjct: 241 DHNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKQQQLLEQQERAAE 300

Query: 280 APVSTELRNATSLADQDQRKTLKFGFSSKGGTSKNIFGGATKKPKVAPVASVFGNDSDDE 327
           APVSTELRNATS+ADQDQRKTLKFGFSSKGGTSKN+FGGA KKPKVAPVASVFGNDSDDE
Sbjct: 301 APVSTELRNATSVADQDQRKTLKFGFSSKGGTSKNMFGGAKKKPKVAPVASVFGNDSDDE 360

[Close]

BLAST of Lsi06G000260 vs. NCBI nr
Match: gi|449435580|ref|XP_004135573.1| (PREDICTED: G patch domain-containing protein 8 [Cucumis sativus])

HSP 1 Score: 511.9 bits (1317), Expect = 8.1e-142
Identity = 271/299 (90.64%), Postives = 280/299 (93.65%), Query Frame = 1


Query: 41  MDYRGYSSRLETNNPNKGYAQEQGSLADDFIDDFRLPINHKPTENVDLDNVEQASLDTQL 100
           MDYRG+SSRLET+NP+KGYA+EQ SL DDFIDDFRLPINHKPTENVDLDNVEQASLDTQL
Sbjct: 1   MDYRGFSSRLETSNPSKGYAREQESLGDDFIDDFRLPINHKPTENVDLDNVEQASLDTQL 60

Query: 101 TSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEENIQRK 160
           TSSNVGYRLLQKMGWKGKGLGK+EQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEENIQRK
Sbjct: 61  TSSNVGYRLLQKMGWKGKGLGKNEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEENIQRK 120

Query: 161 KLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD 220
           KLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD
Sbjct: 121 KLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYD 180

Query: 221 HNHRKRFKEMREMHGSSSRDDRNKREQQH-------------ARKKQQQMLEQKEKAVEA 280
           HNHRKRFKEMREMHGSSSRDDRNKREQQ              ARKKQQQ+LEQ+ +A EA
Sbjct: 181 HNHRKRFKEMREMHGSSSRDDRNKREQQREEREMAKFAQIADARKKQQQLLEQQARAAEA 240

Query: 281 PVSTELRNATSLADQDQRKTLKFGFSSKGGTSKNIFGGATKKPKVAPVASVFGNDSDDE 327
           PVSTELRNATS+ADQDQRKTLKFGFSSKGGTSKNIFGGA KKPKVAPVASVFGNDSDDE
Sbjct: 241 PVSTELRNATSVADQDQRKTLKFGFSSKGGTSKNIFGGAKKKPKVAPVASVFGNDSDDE 299

[Close]

BLAST of Lsi06G000260 vs. NCBI nr
Match: gi|764597830|ref|XP_011466214.1| (PREDICTED: G patch domain-containing protein 8 isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 414.1 bits (1063), Expect = 2.3e-112
Identity = 224/304 (73.68%), Postives = 255/304 (83.88%), Query Frame = 1


Query: 41  MDYRGYSSRLETNNPNKGYAQE----QGSLADDFIDDFRLPINHKPTENVDLDNVEQASL 100
           M  R Y+SR ETN  +K   ++    Q SL DD  ++FRLPIN +PTENVDL++VEQASL
Sbjct: 1   MSNRWYNSRQETNARDKQQHEKEQAYQESLLDDLAEEFRLPINQRPTENVDLEHVEQASL 60

Query: 101 DTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEEN 160
           D QL SSN+G+RLLQKMGWKGKGLGKDEQGI+EPIKSG+RDP+LG+GKQEEDD+FTAEEN
Sbjct: 61  DRQLPSSNIGFRLLQKMGWKGKGLGKDEQGIVEPIKSGIRDPRLGVGKQEEDDYFTAEEN 120

Query: 161 IQRKKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHL 220
           IQR+KLDVE+EETEEHAKKREVLAERE+KIQTEVKEIRKVF+CDLCNKQYKLA+EFE HL
Sbjct: 121 IQRRKLDVEMEETEEHAKKREVLAEREQKIQTEVKEIRKVFFCDLCNKQYKLAVEFETHL 180

Query: 221 SSYDHNHRKRFKEMREMHGSSSRDDRNKREQQHARK------------KQQQMLEQKEKA 280
           SSYDHNHRKRFKEM+EMHGSS RDDR KREQQ   K            KQQQ+ +Q+E++
Sbjct: 181 SSYDHNHRKRFKEMKEMHGSSGRDDRQKREQQRQEKEMAKFAQIADARKQQQLQQQQEES 240

Query: 281 VEAPVSTELRNATSLADQDQRKTLKFGFSSKGGTSKNIFGGATKKPKVA--PVASVFGND 327
             AP S ELR+AT+LADQDQRK LKFGFSSKGGTSK  FG A+KKPKVA  PVASVFGND
Sbjct: 241 ASAPGSAELRSATALADQDQRKALKFGFSSKGGTSKTSFGSASKKPKVAKVPVASVFGND 300

[Close]

BLAST of Lsi06G000260 vs. NCBI nr
Match: gi|470132935|ref|XP_004302330.1| (PREDICTED: G patch domain-containing protein 8 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 413.7 bits (1062), Expect = 3.0e-112
Identity = 224/305 (73.44%), Postives = 255/305 (83.61%), Query Frame = 1


Query: 41  MDYRGYSSRLETNNPNKGYAQE----QGSLADDFIDDFRLPINHKPTENVDLDNVEQASL 100
           M  R Y+SR ETN  +K   ++    Q SL DD  ++FRLPIN +PTENVDL++VEQASL
Sbjct: 1   MSNRWYNSRQETNARDKQQHEKEQAYQESLLDDLAEEFRLPINQRPTENVDLEHVEQASL 60

Query: 101 DTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEEN 160
           D QL SSN+G+RLLQKMGWKGKGLGKDEQGI+EPIKSG+RDP+LG+GKQEEDD+FTAEEN
Sbjct: 61  DRQLPSSNIGFRLLQKMGWKGKGLGKDEQGIVEPIKSGIRDPRLGVGKQEEDDYFTAEEN 120

Query: 161 IQRKKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHL 220
           IQR+KLDVE+EETEEHAKKREVLAERE+KIQTEVKEIRKVF+CDLCNKQYKLA+EFE HL
Sbjct: 121 IQRRKLDVEMEETEEHAKKREVLAEREQKIQTEVKEIRKVFFCDLCNKQYKLAVEFETHL 180

Query: 221 SSYDHNHRKRFKEMREMHGSSSRDDRNKREQQHARK-------------KQQQMLEQKEK 280
           SSYDHNHRKRFKEM+EMHGSS RDDR KREQQ   K             KQQQ+ +Q+E+
Sbjct: 181 SSYDHNHRKRFKEMKEMHGSSGRDDRQKREQQRQEKEMAKFAQMSADARKQQQLQQQQEE 240

Query: 281 AVEAPVSTELRNATSLADQDQRKTLKFGFSSKGGTSKNIFGGATKKPKVA--PVASVFGN 327
           +  AP S ELR+AT+LADQDQRK LKFGFSSKGGTSK  FG A+KKPKVA  PVASVFGN
Sbjct: 241 SASAPGSAELRSATALADQDQRKALKFGFSSKGGTSKTSFGSASKKPKVAKVPVASVFGN 300

[Close]

BLAST of Lsi06G000260 vs. NCBI nr
Match: gi|731416053|ref|XP_010659761.1| (PREDICTED: G patch domain-containing protein 8 [Vitis vinifera])

HSP 1 Score: 411.0 bits (1055), Expect = 2.0e-111
Identity = 229/303 (75.58%), Postives = 254/303 (83.83%), Query Frame = 1


Query: 41  MDYRGYSSRLETNN-PNKGYAQEQG---SLADDFIDDFRLPINHKPTENVDLDNVEQASL 100
           MD R YS R ET++  N+   +E+    SL +D  +DFRLPINHKPTENVDLDNVEQASL
Sbjct: 1   MDRRWYSGRQETSSRDNRQREREEAYKDSLVEDLAEDFRLPINHKPTENVDLDNVEQASL 60

Query: 101 DTQLTSSNVGYRLLQKMGWKGKGLGKDEQGIIEPIKSGMRDPKLGIGKQEEDDFFTAEEN 160
           DTQLTSSN+G+RLLQKMGWKGKGLGKDEQGIIEPIKSG+RDP+LG+GKQEEDDFFTAEEN
Sbjct: 61  DTQLTSSNIGFRLLQKMGWKGKGLGKDEQGIIEPIKSGIRDPRLGVGKQEEDDFFTAEEN 120

Query: 161 IQRKKLDVEVEETEEHAKKREVLAEREEKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHL 220
           IQRKKLDVE+EETEEHAKKREV+AERE+KIQTEVKEIRKVFYC+LCNKQYKLAMEFE HL
Sbjct: 121 IQRKKLDVELEETEEHAKKREVVAEREQKIQTEVKEIRKVFYCELCNKQYKLAMEFEVHL 180

Query: 221 SSYDHNHRKRFKEMREMHGSSSRDDRNKREQQH-------------ARKKQQQMLEQKEK 280
           SSYDHNHRKRFKEMREMHG+SSRDDR KREQQ              ARK+QQQ   Q+E+
Sbjct: 181 SSYDHNHRKRFKEMREMHGTSSRDDRQKREQQRQEREMAKFALMADARKQQQQ---QEEE 240

Query: 281 AVEAPVSTELRNATSLADQDQRKTLKFGFSSKGGTSKNIFGGATKKPKVAPVASVFGNDS 327
           +    VST LR+AT LADQ+QRK LKFGFSSKGG SKN  G A KKPKV+ VASVF NDS
Sbjct: 241 SGNTAVSTTLRSATPLADQEQRKALKFGFSSKGGMSKNSSGSAAKKPKVS-VASVFSNDS 299

The following BLAST results are available for this feature:

BLAST of Lsi06G000260 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GPTC8_MOUSE	7.4e-26	36.45	G patch domain-containing protein 8 OS=Mus musculus GN=Gpatch8 PE=1 SV=1	[more]
GPTC8_HUMAN	2.8e-25	35.29	G patch domain-containing protein 8 OS=Homo sapiens GN=GPATCH8 PE=1 SV=2	[more]
Z804A_MOUSE	1.3e-06	31.36	Zinc finger protein 804A OS=Mus musculus GN=Znf804a PE=2 SV=1	[more]
Z804A_HUMAN	1.3e-06	32.04	Zinc finger protein 804A OS=Homo sapiens GN=ZNF804A PE=1 SV=3	[more]

BLAST of Lsi06G000260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW54_CUCSA	5.7e-142	90.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560720 PE=4 SV=1	[more]
M5WC31_PRUPE	1.4e-111	73.44	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009173mg PE=4 SV=1	[more]
A0A061F535_THECC	6.8e-111	74.67	D111/G-patch domain-containing protein OS=Theobroma cacao GN=TCM_026841 PE=4 SV=...	[more]
U5GCU7_POPTR	2.2e-109	73.99	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s00450g PE=4 SV=1	[more]
A0A0D2W826_GOSRA	1.1e-108	72.90	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G210000 PE=4 SV=1	[more]

BLAST of Lsi06G000260 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G26610.1	8.2e-92	62.91	D111/G-patch domain-containing protein	[more]
AT3G52350.1	2.4e-06	34.55	D111/G-patch domain-containing protein	[more]
AT1G17070.1	9.0e-06	33.98	GC-rich sequence DNA-binding factor-like protein with Tuftelin inter...	[more]

BLAST of Lsi06G000260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659099268\|ref\|XP_008450514.1\|	2.8e-142	90.33	PREDICTED: G patch domain-containing protein 8 [Cucumis melo]	[more]
gi\|449435580\|ref\|XP_004135573.1\|	8.1e-142	90.64	PREDICTED: G patch domain-containing protein 8 [Cucumis sativus]	[more]
gi\|764597830\|ref\|XP_011466214.1\|	2.3e-112	73.68	PREDICTED: G patch domain-containing protein 8 isoform X2 [Fragaria vesca subsp....	[more]
gi\|470132935\|ref\|XP_004302330.1\|	3.0e-112	73.44	PREDICTED: G patch domain-containing protein 8 isoform X1 [Fragaria vesca subsp....	[more]
gi\|731416053\|ref\|XP_010659761.1\|	2.0e-111	75.58	PREDICTED: G patch domain-containing protein 8 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR022755	Znf_C2H2_jaz
IPR007087	Zinc finger, C2H2
IPR000467	G_patch_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G000260.1	Lsi06G000260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 103..143 score: 1.2
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 100..145 score: 2.1
IPR000467	G-patch domain	PROFILE	PS50174	G_PATCH	coord: 102..147 score: 16
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 199..221 scor
IPR022755	Zinc finger, double-stranded RNA binding	PFAM	PF12171	zf-C2H2_jaz	coord: 197..224 score: 1.
None	No IPR available	unknown	Coil	Coil	coord: 243..264 scor
None	No IPR available	PANTHER	PTHR17614	ZINC FINGER-CONTAINING	coord: 83..327 score: 1.6E
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 178..231 score: 6.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G000260	Csa1G560720	Cucumber (Chinese Long) v2	culsiB075
Lsi06G000260	CSPI01G25640	Wild cucumber (PI 183967)	cpilsiB076
Lsi06G000260	Cucsa.050910	Cucumber (Gy14) v1	cgylsiB035
Lsi06G000260	CmaCh10G011830	Cucurbita maxima (Rimu)	cmalsiB076
Lsi06G000260	CmoCh10G012610	Cucurbita moschata (Rifu)	cmolsiB062
Lsi06G000260	Cla005144	Watermelon (97103) v1	lsiwmB396
Lsi06G000260	MELO3C015241	Melon (DHL92) v3.5.1	lsimeB396
Lsi06G000260	ClCG03G017880	Watermelon (Charleston Gray)	lsiwcgB364
Lsi06G000260	MELO3C015241.2	Melon (DHL92) v3.6.1	lsimedB418
Lsi06G000260	Cla97C03G068280	Watermelon (97103) v2	lsiwmbB365
Lsi06G000260	Bhi02G001835	Wax gourd	lsiwgoB522
Lsi06G000260	Cp4.1LG18g00020	Cucurbita pepo (Zucchini)	cpelsiB302
Lsi06G000260	CsGy1G024950	Cucumber (Gy14) v2	cgyblsiB073
Lsi06G000260	CsaV3_1G038040	Cucumber (Chinese Long) v3	cuclsiB086

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G000260	Cucurbita maxima (Rimu)	cmalsiB133
Lsi06G000260	Cucurbita maxima (Rimu)	cmalsiB142
Lsi06G000260	Cucurbita moschata (Rifu)	cmolsiB122
Lsi06G000260	Cucurbita pepo (Zucchini)	cpelsiB560