Lsi05G022070 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G022070
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Zinc finger family protein
Location	chr05 : 28641273 .. 28641899 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTGTTGCAAACTGTTCAGAGAAAAAAACCCATTCATTTTTCATTATGGAAAANCGTCGACGCAGGCTCGGTGGTTCTGCAGGACCGGGAAAGCGAAACAGAGTCGTCAAAGAACCCAACTCGGAGAAGATCGAAGAGGACTCGTAAACCTGATCGCCACCACCATCAGCAGCTCCATCATCATTACAATGTTTTTAAACGCCTCCAGGAGAAGAAGGTGAGGCATCCGGAATCGTGGACGGAGGCGGAACCAGTGAGTTCGATCTCGGGTAGCACAACGGAAGAAGACGTTGCGTTTTGGCTGATGATGCTTTCTCGGGATAAATGGACGAAGCAGCAAGGTGGGTATGAGGAGGAAGAAGATGGGGACGAAGAAGACGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGGAATTAGAAGAGTCGNACTTGGCAAAGACAGTTCATGCAGCAGCAGCAGCAGCAGCAGCAAAGTCTGTTATTCTGTCTGTATCAATTCCCTTTTATTTATTCATTTTCCCTTTTGCCTTTTCGCGTTTAATTCCCTTTATTTTTTTAGACCTCAAAAGCTTCCATGATCTTCGTGAAAAATAA

mRNA sequence

ATGAAGTTGTTGCAAACTGTTCAGAGAAAAAAACCCATTCATTTTTCATTATGGAAAANCGTCGACGCAGGCTCGGTGGTTCTGCAGGACCGGGAAAGCGAAACAGAGTCGTCAAAGAACCCAACTCGGAGAAGATCGAAGAGGACTCGTAAACCTGATCGCCACCACCATCAGCAGCTCCATCATCATTACAATGTTTTTAAACGCCTCCAGGAGAAGAAGGTGAGGCATCCGGAATCGTGGACGGAGGCGGAACCAGTGAGTTCGATCTCGGGTAGCACAACGGAAGAAGACGTTGCGTTTTGGCTGATGATGCTTTCTCGGGATAAATGGACGAAGCAGCAAGGTGGGTATGAGGAGGAAGAAGATGGGGACGAAGAAGACGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGGAATTAGAAGAGTCGNACTTGGCAAAGACAGTTCATGCAGCAGCAGCAGCAGCAGCAGCAAAGTCTGTTATTCTGTCTGTATCAATTCCCTTTTATTTATTCATTTTCCCTTTTGCCTTTTCGCGTTTAATTCCCTTTATTTTTTTAGACCTCAAAAGCTTCCATGATCTTCGTGAAAAATAA

Coding sequence (CDS)

ATGAAGTTGTTGCAAACTGTTCAGAGAAAAAAACCCATTCATTTTTCATTATGGAAAANCGTCGACGCAGGCTCGGTGGTTCTGCAGGACCGGGAAAGCGAAACAGAGTCGTCAAAGAACCCAACTCGGAGAAGATCGAAGAGGACTCGTAAACCTGATCGCCACCACCATCAGCAGCTCCATCATCATTACAATGTTTTTAAACGCCTCCAGGAGAAGAAGGTGAGGCATCCGGAATCGTGGACGGAGGCGGAACCAGTGAGTTCGATCTCGGGTAGCACAACGGAAGAAGACGTTGCGTTTTGGCTGATGATGCTTTCTCGGGATAAATGGACGAAGCAGCAAGGTGGGTATGAGGAGGAAGAAGATGGGGACGAAGAAGACGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGGAATTAGAAGAGTCGNACTTGGCAAAGACAGTTCATGCAGCAGCAGCAGCAGCAGCAGCAAAGTCTGTTATTCTGTCTGTATCAATTCCCTTTTATTTATTCATTTTCCCTTTTGCCTTTTCGCGTTTAATTCCCTTTATTTTTTTAGACCTCAAAAGCTTCCATGATCTTCGTGAAAAATAA

Protein sequence

MKLLQTVQRKKPIHFSLWKXVDAGSVVLQDRESETESSKNPTRRRSKRTRKPDRHHHQQLHHHYNVFKRLQEKKVRHPESWTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQQGGYEEEEDGDEEDEEDEEEEEEEEEEEEEEEEEELEESXLAKTVHAAAAAAAAKSVILSVSIPFYLFIFPFAFSRLIPFIFLDLKSFHDLREK

Homology

[Close]

BLAST of Lsi05G022070 vs. Swiss-Prot
Match: ZAT1_ARATH (Zinc finger protein ZAT1 OS=Arabidopsis thaliana GN=ZAT1 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.3e-09
Identity = 53/107 (49.53%), Postives = 65/107 (60.75%), Query Frame = 1


Query: 27  VLQDRESETESSKNPTRRRSKRTRK--PDRHHHQQLHHHYNVFKRLQEKKV---RHPESW 86
           VLQDRESETESSK P+R+RS+  R+      H Q      +   R  + K+      ES 
Sbjct: 50  VLQDRESETESSKKPSRKRSRLNRRSISSLRHQQSNEEGKSETARAADIKIGVQELSESC 109

Query: 87  TEAEPVSSIS-GSTTEEDVAFWLMMLSRDKWTKQQGGYEEEEDGDEE 128
           TE EP+SS+S  +TTEEDVA  LM+LSRDKW K      EEE+ DEE
Sbjct: 110 TEQEPMSSVSDAATTEEDVALSLMLLSRDKWEK------EEEESDEE 150

[Close]

BLAST of Lsi05G022070 vs. Swiss-Prot
Match: ZAT9_ARATH (Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.5e-08
Identity = 49/116 (42.24%), Postives = 68/116 (58.62%), Query Frame = 1


Query: 19  KXVDAGSVVLQDRESETESSKNP---TRRRSKRTRKPDRHHHQQLHHHYNVFKRLQEKKV 78
           K     SV+L+D ESE+ESS+N    TR+RSKRTRK D            V K+++  ++
Sbjct: 54  KFAFTSSVLLEDGESESESSRNVINLTRKRSKRTRKLDSF----------VTKKVKTSQL 113

Query: 79  RHPESWTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQQGGYEEEEDGDEEDEED 132
            +     +  P SS S +TTEED+AF LMMLSRDKW K +   E  E+ + E+E +
Sbjct: 114 GYKPESDQEPPHSSASDTTTEEDLAFCLMMLSRDKWKKNKSNKEVVEEIETEEESE 159

[Close]

BLAST of Lsi05G022070 vs. TrEMBL
Match: A0A0A0L5N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117400 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.6e-44
Identity = 113/139 (81.29%), Postives = 123/139 (88.49%), Query Frame = 1


Query: 21  VDAGSVVLQDRESETESSKNPTRRRSKRTRKPDRHHHQQLHHHYNVFKRLQEKKVRHPES 80
           VDA SVVLQDRESETESSKNPTRRRSKRTRKPDR HH  LHHHYNVFKRLQEKK+ HPES
Sbjct: 95  VDAASVVLQDRESETESSKNPTRRRSKRTRKPDRRHHHHLHHHYNVFKRLQEKKMNHPES 154

Query: 81  WTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQQGGYEEEEDGDEEDEEDEEEEEEEEE 140
           WTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQQGGYEEEED      E++E+E+E+EE
Sbjct: 155 WTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQQGGYEEEED------EEDEDEDEDEE 214

Query: 141 EEEEEEEEELEESXLAKTV 160
           EEEEE EE +EE+  ++ V
Sbjct: 215 EEEEELEESMEETDDSEAV 227

[Close]

BLAST of Lsi05G022070 vs. TrEMBL
Match: B9IBW4_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0014s06150g PE=4 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 2.3e-16
Identity = 68/125 (54.40%), Postives = 84/125 (67.20%), Query Frame = 1


Query: 22  DAGSVVLQDRESETESSKNPTRRRSKRTRKPDRHHHQQLH--------HHYNVFKRLQEK 81
           DAGSVVLQDRESETESSKNPTRRRSKRT +   +HH Q H         + N+ K+L+ K
Sbjct: 51  DAGSVVLQDRESETESSKNPTRRRSKRTERLLENHHHQYHQQRPRQEQENNNIVKKLELK 110

Query: 82  KV------RHPESWTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQQGGYEEEEDGDEE 133
           K+          S  E EPVSSIS +TTEEDVAF LMMLSRD+W +++   +EE+ G EE
Sbjct: 111 KMGTFKAAAESSSGQEPEPVSSISDTTTEEDVAFCLMMLSRDRWKRKEQENQEEDRGLEE 170

[Close]

BLAST of Lsi05G022070 vs. TrEMBL
Match: F6GV56_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02720 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.1e-16
Identity = 77/138 (55.80%), Postives = 89/138 (64.49%), Query Frame = 1


Query: 21  VDAGSVVLQDRESETESSKNPTRRRSKRTRK-----PDRHHHQQLHHHYNVFKRLQEKKV 80
           VDA SVVLQDRESETESSKNPTRRRSKR RK     P R H Q         K+++  K+
Sbjct: 88  VDAASVVLQDRESETESSKNPTRRRSKRNRKLGLADPPRFHEQ---------KKIKLDKL 147

Query: 81  RHPESWTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQQGGYEEEEDGDEEDEEDEEEE 140
              ESW + EPVSSIS +TTEEDVAF LMMLSRDKW ++Q   E   D         EE+
Sbjct: 148 SKTESWADPEPVSSISDATTEEDVAFCLMMLSRDKWIEEQENQERRHD---------EED 207

Query: 141 EEEEEEEEEEEEEELEES 154
           EEE E E EEEE  ++E+
Sbjct: 208 EEEAEAEAEEEERFVDET 207

[Close]

BLAST of Lsi05G022070 vs. TrEMBL
Match: A0A067JXW6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14572 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.2e-16
Identity = 74/127 (58.27%), Postives = 88/127 (69.29%), Query Frame = 1


Query: 21  VDAGSVVLQDRESETESSKNPTRRRSKRTR---KPDRHHHQQLHHHY-NVFKRLQEKKVR 80
           VDA SVVLQDRESETESSKNPTRRRSKRTR   +   HHHQQ      N FK+L   K+ 
Sbjct: 94  VDATSVVLQDRESETESSKNPTRRRSKRTRSLLEHQYHHHQQRQQEQENNFKKLIFSKLS 153

Query: 81  HPESWTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQQGGYEEEEDGDEEDEEDEEEEE 140
             ESW E EPVSSIS +T EEDVAF LMMLSRDKW +++   +   + +EE+ E E+  E
Sbjct: 154 KTESWAEPEPVSSISDTTAEEDVAFCLMMLSRDKWKRREQLLQNNREQEEEEAEAEKSIE 213

Query: 141 EEEEEEE 144
           E +E +E
Sbjct: 214 ETDESDE 220

[Close]

BLAST of Lsi05G022070 vs. TrEMBL
Match: A0A061DUC1_THECC (C2H2-like zinc finger protein, putative OS=Theobroma cacao GN=TCM_005601 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-13
Identity = 80/164 (48.78%), Postives = 95/164 (57.93%), Query Frame = 1


Query: 21  VDAGSVVLQDRESETESSKNPTRRRSKRTRKPDRHHHQQLHHHYNVFKRLQEKKVRH--- 80
           VDAGSVVLQDRESETES KNPTRRRSKRTRK   HH  Q HH     + LQE+ ++    
Sbjct: 298 VDAGSVVLQDRESETESHKNPTRRRSKRTRKILEHH--QYHHQQQESQELQEETIKKLKD 357

Query: 81  -------PESWTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQQGGYEEEEDGDEEDEE 140
                   ESW E EPVSSIS +TTEEDVAF LMMLSRD+W  +           +ED+E
Sbjct: 358 NNNQLSKTESWAEPEPVSSISDTTTEEDVAFCLMMLSRDQWKSKV---------HQEDDE 417

Query: 141 DEEEEEEEEEEEEEEEEEELEESXLAKTVHAAAAAAAAKSVILS 175
           +E  E E+  EE +E EE  + S + +T            V  S
Sbjct: 418 EEATEIEKSMEETDESEEYFKISKVNRTTRGKYRCETCNKVFKS 450

[Close]

BLAST of Lsi05G022070 vs. TAIR10
Match: AT1G02030.1 (AT1G02030.1 C2H2-like zinc finger protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10
Identity = 53/107 (49.53%), Postives = 65/107 (60.75%), Query Frame = 1


Query: 27  VLQDRESETESSKNPTRRRSKRTRK--PDRHHHQQLHHHYNVFKRLQEKKV---RHPESW 86
           VLQDRESETESSK P+R+RS+  R+      H Q      +   R  + K+      ES 
Sbjct: 50  VLQDRESETESSKKPSRKRSRLNRRSISSLRHQQSNEEGKSETARAADIKIGVQELSESC 109

Query: 87  TEAEPVSSIS-GSTTEEDVAFWLMMLSRDKWTKQQGGYEEEEDGDEE 128
           TE EP+SS+S  +TTEEDVA  LM+LSRDKW K      EEE+ DEE
Sbjct: 110 TEQEPMSSVSDAATTEEDVALSLMLLSRDKWEK------EEEESDEE 150

[Close]

BLAST of Lsi05G022070 vs. TAIR10
Match: AT3G60580.1 (AT3G60580.1 C2H2-like zinc finger protein)

HSP 1 Score: 58.9 bits (141), Expect = 4.2e-09
Identity = 49/116 (42.24%), Postives = 68/116 (58.62%), Query Frame = 1


Query: 19  KXVDAGSVVLQDRESETESSKNP---TRRRSKRTRKPDRHHHQQLHHHYNVFKRLQEKKV 78
           K     SV+L+D ESE+ESS+N    TR+RSKRTRK D            V K+++  ++
Sbjct: 54  KFAFTSSVLLEDGESESESSRNVINLTRKRSKRTRKLDSF----------VTKKVKTSQL 113

Query: 79  RHPESWTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQQGGYEEEEDGDEEDEED 132
            +     +  P SS S +TTEED+AF LMMLSRDKW K +   E  E+ + E+E +
Sbjct: 114 GYKPESDQEPPHSSASDTTTEEDLAFCLMMLSRDKWKKNKSNKEVVEEIETEEESE 159

[Close]

BLAST of Lsi05G022070 vs. NCBI nr
Match: gi|659074763|ref|XP_008437783.1| (PREDICTED: zinc finger protein ZAT9 [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 1.7e-44
Identity = 114/133 (85.71%), Postives = 120/133 (90.23%), Query Frame = 1


Query: 21  VDAGSVVLQDRESETESSKNPTRRRSKRTRKPDRHHHQQLHHHYNVFKRLQEKKVRHPES 80
           VDA SVVLQDRESETESSKNPTRRRSKRTRKPDR HH  LH HYNVFKRLQEKK+  PES
Sbjct: 95  VDAASVVLQDRESETESSKNPTRRRSKRTRKPDRRHHHHLHRHYNVFKRLQEKKMNQPES 154

Query: 81  WTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQQGGYEEEEDGDEEDEEDEEEEEEEEE 140
           WTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQ+GGYEEEED      EDEE+E+E+E+
Sbjct: 155 WTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQKGGYEEEED------EDEEDEDEDED 214

Query: 141 EEEEEEEEELEES 154
           EEEEEEEEELEES
Sbjct: 215 EEEEEEEEELEES 221

[Close]

BLAST of Lsi05G022070 vs. NCBI nr
Match: gi|778676654|ref|XP_011650633.1| (PREDICTED: zinc finger protein ZAT1 [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 3.8e-44
Identity = 112/131 (85.50%), Postives = 120/131 (91.60%), Query Frame = 1


Query: 21  VDAGSVVLQDRESETESSKNPTRRRSKRTRKPDRHHHQQLHHHYNVFKRLQEKKVRHPES 80
           VDA SVVLQDRESETESSKNPTRRRSKRTRKPDR HH  LHHHYNVFKRLQEKK+ HPES
Sbjct: 95  VDAASVVLQDRESETESSKNPTRRRSKRTRKPDRRHHHHLHHHYNVFKRLQEKKMNHPES 154

Query: 81  WTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQQGGYEEEEDGDEEDEEDEEEEEEEEE 140
           WTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQQGGYEEEED ++EDE+++EEEEEEE 
Sbjct: 155 WTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQQGGYEEEEDEEDEDEDEDEEEEEEEL 214

Query: 141 EEEEEEEEELE 152
           EE  EE ++ E
Sbjct: 215 EESMEETDDSE 225

[Close]

BLAST of Lsi05G022070 vs. NCBI nr
Match: gi|1009143709|ref|XP_015889403.1| (PREDICTED: zinc finger protein ZAT9-like [Ziziphus jujuba])

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-17
Identity = 77/144 (53.47%), Postives = 92/144 (63.89%), Query Frame = 1


Query: 21  VDAGSVVLQDRESETESSKNPTRRRSKRTRKPDRHHHQQLHHHYNVFKRLQE-------- 80
           VDAGSVVLQDRESETESSKNPTRRRSKRTRK      Q  HHH+   +  +E        
Sbjct: 121 VDAGSVVLQDRESETESSKNPTRRRSKRTRKSGMSELQYHHHHHQKIEEQEEGVMNNNNK 180

Query: 81  ---KKVRHPESWTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQQGGYEEEEDGDEEDE 140
               K+   ESW E EPVSS+S +TTEEDVAF LMMLSRDKW KQ              E
Sbjct: 181 IKFNKLSKTESWAEPEPVSSVSDTTTEEDVAFCLMMLSRDKWKKQ--------------E 240

Query: 141 EDEEEEEEEEEEEEEEEEEELEES 154
           +  +E+E++EEE+E+E E  LE++
Sbjct: 241 QQRDEKEDQEEEQEDEGERSLEDT 250

[Close]

BLAST of Lsi05G022070 vs. NCBI nr
Match: gi|1000982858|ref|XP_015584576.1| (PREDICTED: zinc finger protein ZAT9 [Ricinus communis])

HSP 1 Score: 96.3 bits (238), Expect = 6.8e-17
Identity = 81/145 (55.86%), Postives = 99/145 (68.28%), Query Frame = 1


Query: 21  VDAGSVVLQDRESETESSKNPTRRRSKRTRKPDRHHHQQLHHHYNVFKRLQE-------- 80
           VDA SVVLQDRESETESSKNPTRRRSKRT K   HH   LH H+    + +E        
Sbjct: 53  VDAASVVLQDRESETESSKNPTRRRSKRTGKLLEHHQYHLHRHHEQEHQRREQETNNSNS 112

Query: 81  -KKVRH----PESWTEAEPVSSISGSTTEEDVAFWLMMLSRDKW-TKQQGGYEEEEDGDE 140
            KKV+      ESW E EPVSSIS +TTEEDVAF LMMLSRDKW TK +  + +E++ ++
Sbjct: 113 IKKVKFNKFSTESWVEPEPVSSISDTTTEEDVAFCLMMLSRDKWKTKDKPQHHQEQEQEQ 172

Query: 141 EDEEDEEEEEEEEEEEEEEEEEELE 152
           +D+E+EEEEE E   EE +E +E +
Sbjct: 173 DDQEEEEEEEAERSIEETDESDEFK 197

[Close]

BLAST of Lsi05G022070 vs. NCBI nr
Match: gi|566202882|ref|XP_002320706.2| (zinc finger family protein [Populus trichocarpa])

HSP 1 Score: 94.0 bits (232), Expect = 3.4e-16
Identity = 68/125 (54.40%), Postives = 84/125 (67.20%), Query Frame = 1


Query: 22  DAGSVVLQDRESETESSKNPTRRRSKRTRKPDRHHHQQLH--------HHYNVFKRLQEK 81
           DAGSVVLQDRESETESSKNPTRRRSKRT +   +HH Q H         + N+ K+L+ K
Sbjct: 51  DAGSVVLQDRESETESSKNPTRRRSKRTERLLENHHHQYHQQRPRQEQENNNIVKKLELK 110

Query: 82  KV------RHPESWTEAEPVSSISGSTTEEDVAFWLMMLSRDKWTKQQGGYEEEEDGDEE 133
           K+          S  E EPVSSIS +TTEEDVAF LMMLSRD+W +++   +EE+ G EE
Sbjct: 111 KMGTFKAAAESSSGQEPEPVSSISDTTTEEDVAFCLMMLSRDRWKRKEQENQEEDRGLEE 170

The following BLAST results are available for this feature:

BLAST of Lsi05G022070 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZAT1_ARATH	2.3e-09	49.53	Zinc finger protein ZAT1 OS=Arabidopsis thaliana GN=ZAT1 PE=2 SV=1	[more]
ZAT9_ARATH	7.5e-08	42.24	Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1	[more]

BLAST of Lsi05G022070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5N5_CUCSA	1.6e-44	81.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117400 PE=4 SV=1	[more]
B9IBW4_POPTR	2.3e-16	54.40	Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0014s06150g PE=4 SV=2	[more]
F6GV56_VITVI	3.1e-16	55.80	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02720 PE=4 SV=...	[more]
A0A067JXW6_JATCU	5.2e-16	58.27	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14572 PE=4 SV=1	[more]
A0A061DUC1_THECC	1.1e-13	48.78	C2H2-like zinc finger protein, putative OS=Theobroma cacao GN=TCM_005601 PE=4 SV...	[more]

BLAST of Lsi05G022070 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02030.1	1.3e-10	49.53	C2H2-like zinc finger protein	[more]
AT3G60580.1	4.2e-09	42.24	C2H2-like zinc finger protein	[more]

BLAST of Lsi05G022070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074763\|ref\|XP_008437783.1\|	1.7e-44	85.71	PREDICTED: zinc finger protein ZAT9 [Cucumis melo]	[more]
gi\|778676654\|ref\|XP_011650633.1\|	3.8e-44	85.50	PREDICTED: zinc finger protein ZAT1 [Cucumis sativus]	[more]
gi\|1009143709\|ref\|XP_015889403.1\|	1.4e-17	53.47	PREDICTED: zinc finger protein ZAT9-like [Ziziphus jujuba]	[more]
gi\|1000982858\|ref\|XP_015584576.1\|	6.8e-17	55.86	PREDICTED: zinc finger protein ZAT9 [Ricinus communis]	[more]
gi\|566202882\|ref\|XP_002320706.2\|	3.4e-16	54.40	zinc finger family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0044212	transcription regulatory region DNA binding
molecular_function	GO:0005488	binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G022070.1	Lsi05G022070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016024	Armadillo-type fold	unknown	SSF48371	ARM repeat	coord: 94..154 score: 9.2
None	No IPR available	unknown	Coil	Coil	coord: 155..157 score: -coord: 119..153 scor
None	No IPR available	PANTHER	PTHR26374	FAMILY NOT NAMED	coord: 21..149 score: 1.3
None	No IPR available	PANTHER	PTHR26374:SF175	C2H2-LIKE ZINC FINGER PROTEIN-RELATED	coord: 21..149 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G022070	Csa3G117400	Cucumber (Chinese Long) v2	culsiB209
Lsi05G022070	CSPI03G07250	Wild cucumber (PI 183967)	cpilsiB207
Lsi05G022070	Cucsa.259870	Cucumber (Gy14) v1	cgylsiB415
Lsi05G022070	CmaCh06G009530	Cucurbita maxima (Rimu)	cmalsiB766
Lsi05G022070	CmoCh06G009770	Cucurbita moschata (Rifu)	cmolsiB758
Lsi05G022070	Cla021089	Watermelon (97103) v1	lsiwmB365
Lsi05G022070	MELO3C005960	Melon (DHL92) v3.5.1	lsimeB378
Lsi05G022070	ClCG05G000220	Watermelon (Charleston Gray)	lsiwcgB335
Lsi05G022070	MELO3C005960.2	Melon (DHL92) v3.6.1	lsimedB396
Lsi05G022070	Bhi01G000438	Wax gourd	lsiwgoB433
Lsi05G022070	Cp4.1LG08g00350	Cucurbita pepo (Zucchini)	cpelsiB714
Lsi05G022070	CsGy3G007390	Cucumber (Gy14) v2	cgyblsiB196
Lsi05G022070	Carg24179	Silver-seed gourd	carlsiB088

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G022070	Cucurbita maxima (Rimu)	cmalsiB245
Lsi05G022070	Cucurbita moschata (Rifu)	cmolsiB233
Lsi05G022070	Cucurbita pepo (Zucchini)	cpelsiB506
Lsi05G022070	Silver-seed gourd	carlsiB119
Lsi05G022070	Cucumber (Chinese Long) v3	cuclsiB228
Lsi05G022070	Watermelon (97103) v2	lsiwmbB333