Lsi05G021920 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G021920
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionE3 ubiquitin-protein ligase BRE1-like 1
Locationchr05 : 28532859 .. 28538309 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGTTTAAATGAAATAATACAATTGTAATTACATAGAATGACAGGATATTGATATAAAAAGTTTGCCTATTCAGTTGATGAAAAAGTTTACACAAATTGTTGAACAAATCAAACCGTAACTAACGACGTTCACTACAAACAATTACACAAAATATAAAATGGTTATAGAAGTGAAGTGAAGGGCAGAATAGTTTAAGTATAAATTTATACTGGAAGGCACGGATTTGTATAAAATATTGACAAGTATAAAAGAATGGGGATGATTAATTCCAATTTGTGATTTGCAGTTGCCGATAGAATTTCCACTTTCCGGAAGTGCCCCCATATCTTTCAAAGAATTTCGACGCCATCGGAATTTTGGCACTGCCACAGCAGTAGACCCACACAACTCGCCATTTCCCCGCTCCATAGAACCAGAACAAAGTGGGAGCGAGGGCGCATCAGAACCCAGGTTACGCCCGAGAAATCCAGCCGTTCCTCTGAGCTGAGGTTGTTGGAATTTCATTCGTTTTACAGGTTTTCGCCTTGATTAGGGTTTGAGCGGTTGAATCAATCATATTTTTTCTTTTTATTGGTTTTTGTTGCTTCGAGACTGAATATATTAGCCGAGCTTTGTGCAAATACCTTTTTAGCTCTAGGATTTTCTTGAGGAATATACTATCATGAGGAGGGCTGTGGATTGAAGTAGTGAACGGCAATTAATCTTCCAGAAGGGTGATCCTCTGAATTAGGGTTTTCAGGTGCGTATCAATCTCTGGAGAGGTGTTATGTGAGTGGACCTGGTGGCTGGCTCTGGTGGCCTGTGTCTGGGGGAATGGGGAGCACCGTCGAATCAGATAGAAAGCGGCGTCACTTTAGCACCATATCACCTACGGCTGCTACTGCTAAGAAAGCGCCCTTCTTGCCTGTTTCTGAGGACAAAAAGGTAAGGTTATTCAGTTAATTAGTTTCTAACTGATTCGAACTTATTGTACTTCGATACTAGGTTTTGTAGGTCTCTCCTGGCCGGCGGTTTCGGTTTAGATTATTACGTTTATTGAACAACTTTGCTTGTTTAGCTATTCTTTTTCCCAAACTCATATTAACTAGGGATATTGGATTTTCATTTTTTATTTGTTGCCATCTTCCTTCTACTAATCCCAGGGTCAGGACTTTATATCTACCTAGTCTGATGCAATCAATGTAAATTTCTGTTGGTTTTTGTTTGAATTTGGAGGAAAGTCATCTTCTGAGAAGAAGAACCATGAACTGTTGGTACCATGTACGAGAACTTCTAATTCATGATTTATGATTTGTGCTTTTGAGTGGTGTACGGAGTTAAAGAAAATCAAAATTGATTTTGAATACATACTCTCTCATGTGGCTTGAGATTTTGGAAAAGAAACCTAGTATTTGTATTGAATAATGAAAGAATTCAAAATGTGTTTTTTTTTCCCAATTGAATCATGTGTTGCAATGTATAAAATAATTTAGAAGAATGCTCATTCTCATAATTGACACAATTCAAGAAGTAGCATCCTTTATGAATCTATGTCATGAACATTGTATTGTACAAATATGTAATTTTCCTTGTCATTGAATTTGTCATCTTGATCTCTCTCCATAGTTTCAAAATTTTCATAAAACTGTAGAAGACTACCAGTATGCCGCAGTGACTGTATACATGCATGAGATATTCAAGAATTAGCATTCTTTATGAACTATGTCATAAACATTGTATTGATACGTAATTTTCCCTGTCATTGAATTTGTCATCTTGATCTCTCTCCATAGTTTCAAAATTTTCATAAAACTGAATATTTAGAAGGCTACCAGTATGCCGCAGTGTCTGTATACCCATTCATGTGAGATAAATACTTTTGGACAATCAAGTATTAACATATTCTTTGTTGGGCATCCATGCAATTTAGGAAAAAACGAGGAAGATGTTTGTGGGTTTTGTTTATTTGTGGAATTTTATCGAAGTTTTATTTCTCCAACTTTGTTGGATTTAGGATTCTCAACATTGGATATATCTTTTCAATATTTAATGGAGTATTGAGTCCTAGTTCATTCTATTTGTTTATACTGGGGAAGTTTTGTTACATGTTTGGAAGTTTTGAACTGTGAGAGTTGTTTTTCAGTAATTTCATGTTTTCTTTTTTTACATTATTTTTACTTTTTCAGGCTGGGTTTCATCGGTGGTGGTTTGTGGGTGCATTCTTTGGTTTTCTTTCCAAGTATTTACGGTTATTACTTATTAGTGCTGTTATCTGGATTTTCATCTCATACCCAAAGTCTTATTTTCTCTACAAAAATTTTCTCCTGCAAAACTTTGTTATGTTTTAAATATCTGTGGCATTTTTTATCTCAATGATTTCATTTGTTAATACTTGTCAAATGTCATTATTAAATGAAAAAAGGCGTAATCAATATATAGTTAGATTCTCGTTTTAAAAAAAAGGAATATATAGTTAGATTTTGTTTGTTAATTTTTTTTGTTGGGGGTAAAGGAAACAATTTTCATTGATAAAATGATAAGAGGCTAATGTTCAAAGCTCAAGTAAACGAAAAGCAAAAATTTCCGAAATTTCCGAAATGAGTACATAGAGAAGAAAAGGACTAAGCAGGAGACATAAAATCAATTCAGATCTAATGTGAAGAGGCTTGAACCAGTACTAAACCAAAACGAGCAATCTAATGATGAAGCTTATCCTGTAAAGACCGTTTATTAGATTTTTGTTAGTTCTACCAACTTGATTTGCCTTAGTAGAGAGAGAGAAAAAAGCAATAGAAAAACAACATGCTATTGATTTATGAATCAAGGGGAGGACCCCTTCAACATAATGTCTGCATCCAATGAGTGAATTGCATCAAAGGCTATGATGGTCTTTTTCGTGATCTGTGTGTATACTACTATTTAAGAAACTGAAAACTAGGTCCTAATATTATCCCTCTTTCCTTTGCAGCTTGATGTTGCTGTTCTTCAATACCAAAATCAGAAGCTCATACAGAAGTTAGAGGTTCAGAAGGTAGAGTACAAATCCCTTCAGAATAAATATGCTCAGTTAAGGGAGAAACAAGAACCATATGATATGACAGTGGCTGTGGTTAAAAACTGTTGGGATGAGGTACGTATTATATGTATCACTGGTCATCTTCTAGACATACCACGTGATCTTTTGCACATTGCTTGAAATGTAGTTTATCCATTTTGCAACAGCTTGTCAATGGACTGGAAACATCTTCTGTTCGTATGAGGAGGTGGAGGAGCAAGCAGGATGGTGAACATACAATATCTGCTGCAGGTGAGGATTTTGGACTGAATATGCTGTCTTTGTGTCTATGGTGTGAGAAAGTGCTTCCATTCTTTGTTAAGTTTTTTCTTGGTTTTTATATTGAAGTTCTGAAACACTCAATATCATCAATTGGAGCTTCACTATATGACTTGTTCGTATTCCTCTGGGCATATAGTTTTCTTTCCCAGTATCTTTGGAACTTGAAATTAGTGGTGTTATGGATCATTGATAAAATTATTTTGGTTGTCATGAGATCATGCATATTCTGAATGAGGTTGCCCAGATTCTTGACGAAATGCCTCTCAAGAGAAACTAGTAACTGGCTAAGTTTGTTCTATTTTATTTTATTTTATTTTTATTATTATTTTTAGGAAACATGAGGGTATATTAAAAGACAAAAGAAATACAACCTACAGGCAGGGGATGAGAAGGCCTTCTCCCAACAAAACTAATGAATAAACTCTCTTTGGTAGTAGTACATCTTCATATATTGAGTGTTCAGTATCCTGATATTTTAAACCATCAATGAAACATTGTTCCTATATATATATATATATTATATTGAACACATAAGACTCTCTGAAGGAAAGTGTACAAGCTGGGGTGAGGTTCTAAACTTATATTAGTTTCATGCTGCTTGGTATATGTTTTTCAATTCTTTTGTAATTATACTCCCGTTATATTTAGTGAACTTGGAGTTCTTAAAATTGTTATAAGATGTTTGAGTAACTAAGATGGTAGGTATGTTCTGTTGGTTTCTTGTCTCTTTTAATTAAAAGAATCTCTGCCCATCTTCATATCTTGGTCCCATTCTTTTGCTAGTAATGATATATGAAAGATCATATTTCTTAATTGCTTTGTAGATGGATCTTCGTCTAGCTTTGAAGATGCTGTTCTTAGCCGGCTTGCAGAAACAGGCGCTACTCAAAGTTCCTCAGCATATAGTTCCTCCAAGCACATGGAAGAAGAAACAGAATCACCATGTGAGAAGACCAAAACCATTGAGCGAAATATAGAAGCTTCAATTGAAAATCTCTGGTATCTGAAGGATGGTTTACATTCCACATTGTTGAATGAGCTCCCAAAAGATGGTATGAATAAAGACACGTGGACGCTTATGCGATAATCTATATCTGCTGTCATTCTTTGTTCCATTTGGTTTCTTGCTTAGTTTTCTATACATATTGGTTGTTTTGTTAGATTCATTCAGGAATAGGACATCCAGCGACTTGGTTAAAGAAGTAAAGAATATGAGGTTGAGAGTAAAGGATTTTTTGTTTAAGCAGAAGGTGTTGGCTAAAGAATTGGAGAATCACCGGGACTTGGATACAAAAACTAAAGCTGAGCTAAAAGTTTTGAAAGGTAACTTCCATTTCTCCTGAAAACTCCTAAGATTGTTTTATTTCTCTCCTTCAATAGCCCCAAAGATATTTATTTTCTACACCTTTATACCTGAATTGATCTTCAAGCACAAGTCTAATCATCAATTGCTAATCTAGGATTTACCTCATGGTGCTTTAGTTTTATGAGATTTATCTTGCAGGTTTCCTTAAATCTTCTTTTTATTTATGTGAGAAGATTCCCCCACAAATAAGTAAAGGGGGTGATTTATGAAAAGATGGGTACTTGTAGGAGTGTTTTTCTTTTTGATAGAAACAAGCCTTAGGTTTAGAGTTGATGTCTATTTGGTCTTTGAAGTTCCAAAACAAACACTTTAGTCCTTGAAGTTTAAGAAATAATTCTAAATGGTCCCTCAGCCCATTTGACTGTCAATTGACTAACGAAAATATGATGTGGTGGTTAAATTTTGTTGATCATACTTGCTTATTTGGAAAATTACTTAATTAAATAATATTTCTAGGCTTGTGTGGCAAAAAAAAATTGATTTATTAATTTGTTGGGTTGATCGAATCTTTCCTTCCCCTTCCCTCTCCCATCTTTTCCTTCCTCTCCCTTTTATCTCTTTCAGTTGCAACCTATTCGTCATCATTGCCGTCTCCGTTGCCGCCATTGTTGATCCATCACCACTGCAGACGACGCCCTCCAACAAACTTATTCGCTTGTTCCAGATCTGAAACATTTTGGACTGGAACATGTCCCTCCTCTAGTGATGATGTTCTTCGCACTAAGGAGAGGAGCCTTTGGGCTTCCCTCCTCCTTCCTAGATGA

mRNA sequence

ATGTGTTTGCCGATAGAATTTCCACTTTCCGGAAGTGCCCCCATATCTTTCAAAGAATTTCGACGCCATCGGAATTTTGGCACTGCCACAGCAGTAGACCCACACAACTCGCCATTTCCCCGCTCCATAGAACCAGAACAAAGTGCGTATCAATCTCTGGAGAGGTGTTATGTGAGTGGACCTGGTGGCTGGCTCTGGTGGCCTGTGTCTGGGGGAATGGGGAGCACCGTCGAATCAGATAGAAAGCGGCGTCACTTTAGCACCATATCACCTACGGCTGCTACTGCTAAGAAAGCGCCCTTCTTGCCTGTTTCTGAGGACAAAAAGGTCTCTCCTGGCCGGCGGTTTCGGTTTAGATTATTACGCTGGGTTTCATCGGTGGTGGTTTGTGGGTGCATTCTTTGGTTTTCTTTCCAAGTATTTACGCTTGATGTTGCTGTTCTTCAATACCAAAATCAGAAGCTCATACAGAAGTTAGAGGTTCAGAAGGTAGAGTACAAATCCCTTCAGAATAAATATGCTCAGTTAAGGGAGAAACAAGAACCATATGATATGACAGTGGCTGTGGTTAAAAACTGTTGGGATGAGCTTGTCAATGGACTGGAAACATCTTCTGTTCGTATGAGGAGGTGGAGGAGCAAGCAGGATGGTGAACATACAATATCTGCTGCAGATGGATCTTCGTCTAGCTTTGAAGATGCTGTTCTTAGCCGGCTTGCAGAAACAGGCGCTACTCAAAGTTCCTCAGCATATAGTTCCTCCAAGCACATGGAAGAAGAAACAGAATCACCATGTGAGAAGACCAAAACCATTGAGCGAAATATAGAAGCTTCAATTGAAAATCTCTGGTATCTGAAGGATGGTTTACATTCCACATTGTTGAATGAGCTCCCAAAAGATGATTCATTCAGGAATAGGACATCCAGCGACTTGGTTAAAGAAGTAAAGAATATGAGGTTGAGAGTAAAGGATTTTTTGTTTAAGCAGAAGGTGTTGGCTAAAGAATTGGAGAATCACCGGGACTTGGATACAAAAACTAAAGCTGAGCTAAAAGTTTTGAAAGTTGCAACCTATTCGTCATCATTGCCGTCTCCGTTGCCGCCATTGTTGATCCATCACCACTGCAGACGACGCCCTCCAACAAACTTATTCGCTTGTTCCAGATCTGAAACATTTTGGACTGGAACATGTCCCTCCTCTAGTGATGATGTTCTTCGCACTAAGGAGAGGAGCCTTTGGGCTTCCCTCCTCCTTCCTAGATGA

Coding sequence (CDS)

ATGTGTTTGCCGATAGAATTTCCACTTTCCGGAAGTGCCCCCATATCTTTCAAAGAATTTCGACGCCATCGGAATTTTGGCACTGCCACAGCAGTAGACCCACACAACTCGCCATTTCCCCGCTCCATAGAACCAGAACAAAGTGCGTATCAATCTCTGGAGAGGTGTTATGTGAGTGGACCTGGTGGCTGGCTCTGGTGGCCTGTGTCTGGGGGAATGGGGAGCACCGTCGAATCAGATAGAAAGCGGCGTCACTTTAGCACCATATCACCTACGGCTGCTACTGCTAAGAAAGCGCCCTTCTTGCCTGTTTCTGAGGACAAAAAGGTCTCTCCTGGCCGGCGGTTTCGGTTTAGATTATTACGCTGGGTTTCATCGGTGGTGGTTTGTGGGTGCATTCTTTGGTTTTCTTTCCAAGTATTTACGCTTGATGTTGCTGTTCTTCAATACCAAAATCAGAAGCTCATACAGAAGTTAGAGGTTCAGAAGGTAGAGTACAAATCCCTTCAGAATAAATATGCTCAGTTAAGGGAGAAACAAGAACCATATGATATGACAGTGGCTGTGGTTAAAAACTGTTGGGATGAGCTTGTCAATGGACTGGAAACATCTTCTGTTCGTATGAGGAGGTGGAGGAGCAAGCAGGATGGTGAACATACAATATCTGCTGCAGATGGATCTTCGTCTAGCTTTGAAGATGCTGTTCTTAGCCGGCTTGCAGAAACAGGCGCTACTCAAAGTTCCTCAGCATATAGTTCCTCCAAGCACATGGAAGAAGAAACAGAATCACCATGTGAGAAGACCAAAACCATTGAGCGAAATATAGAAGCTTCAATTGAAAATCTCTGGTATCTGAAGGATGGTTTACATTCCACATTGTTGAATGAGCTCCCAAAAGATGATTCATTCAGGAATAGGACATCCAGCGACTTGGTTAAAGAAGTAAAGAATATGAGGTTGAGAGTAAAGGATTTTTTGTTTAAGCAGAAGGTGTTGGCTAAAGAATTGGAGAATCACCGGGACTTGGATACAAAAACTAAAGCTGAGCTAAAAGTTTTGAAAGTTGCAACCTATTCGTCATCATTGCCGTCTCCGTTGCCGCCATTGTTGATCCATCACCACTGCAGACGACGCCCTCCAACAAACTTATTCGCTTGTTCCAGATCTGAAACATTTTGGACTGGAACATGTCCCTCCTCTAGTGATGATGTTCTTCGCACTAAGGAGAGGAGCCTTTGGGCTTCCCTCCTCCTTCCTAGATGA

Protein sequence

MCLPIEFPLSGSAPISFKEFRRHRNFGTATAVDPHNSPFPRSIEPEQSAYQSLERCYVSGPGGWLWWPVSGGMGSTVESDRKRRHFSTISPTAATAKKAPFLPVSEDKKVSPGRRFRFRLLRWVSSVVVCGCILWFSFQVFTLDVAVLQYQNQKLIQKLEVQKVEYKSLQNKYAQLREKQEPYDMTVAVVKNCWDELVNGLETSSVRMRRWRSKQDGEHTISAADGSSSSFEDAVLSRLAETGATQSSSAYSSSKHMEEETESPCEKTKTIERNIEASIENLWYLKDGLHSTLLNELPKDDSFRNRTSSDLVKEVKNMRLRVKDFLFKQKVLAKELENHRDLDTKTKAELKVLKVATYSSSLPSPLPPLLIHHHCRRRPPTNLFACSRSETFWTGTCPSSSDDVLRTKERSLWASLLLPR
Homology
[Close]
BLAST of Lsi05G021920 vs. Swiss-Prot
Match: BRE1A_ARATH (E3 ubiquitin-protein ligase BRE1-like 1 OS=Arabidopsis thaliana GN=HUB1 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.6e-31
Identity = 105/284 (36.97%), Postives = 150/284 (52.82%), Query Frame = 1 

Query: 73  MGSTVESDRKRRHFSTISPTAATA--KKAPFLPVSEDKKVSPGRRFRFRLLRWVSSVVVC 132
           M ST E DRKRRHFS+ISP+ A A  KK PF                     W SS    
Sbjct: 1   MASTGEPDRKRRHFSSISPSEAAAAVKKQPF--------------------FWPSSED-- 60

Query: 133 GCILWFSFQVFTLDVAVLQYQNQKLIQKLEVQKVEYKSLQNKYAQLREKQEPYDMTVAVV 192
                       LD AVLQ+QN KL QKLE Q+VE   L++K +Q++EKQ PY+ ++  V
Sbjct: 61  -----------KLDTAVLQFQNLKLSQKLEAQQVECSILEDKLSQIKEKQLPYNSSLKTV 120

Query: 193 KNCWDELVNGLETSSVRMRRWRSKQDGEHTISAADGSSSSFEDAVLSRLAETGATQSSSA 252
              W++L   +E+ SVR+    S       ++  DGSS + ++  ++RL ETGAT+SSS+
Sbjct: 121 HKSWEKLTASVESCSVRVSD--SSSGAHRFVNKEDGSSPAVKNDFINRLLETGATESSSS 180

Query: 253 YSSSKHMEEETESPCEKTKTIERNIEASIENLWYLKDGLHSTLLNELPKDDSFRNRTSSD 312
              S  MEE   +   +      N+ A+ E+L  LKD L+ T+L      D       S+
Sbjct: 181 NICSNQMEENGVNTSSQMTQTLYNLVAATEDLRCLKDELYPTVLRTNLGKDLCGQLALSE 240

Query: 313 LVKEVKNMRLRVKDFLFKQKVLAKELENHRDLDTKTKAELKVLK 355
           L  E+K+ R  + D L K K L++EL++HRD D K + +LK ++
Sbjct: 241 LESEIKSFRGDLDDVLVKFKSLSRELQSHRDADAKVRVDLKRIR 249

[Close]
BLAST of Lsi05G021920 vs. Swiss-Prot
Match: BRE1A_ORYSI (E3 ubiquitin-protein ligase BRE1-like 1 OS=Oryza sativa subsp. indica GN=BRE1A PE=3 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 3.6e-17
Identity = 82/285 (28.77%), Postives = 134/285 (47.02%), Query Frame = 1 

Query: 73  MGSTVESDRKRRHFSTISPTAATAKKAPFLPVSEDKKVSPGRRFRFRLLRWVSSVVVCGC 132
           MGST E DRKRR  S+++P           PVS  K+++       +             
Sbjct: 1   MGSTGEPDRKRRLSSSVAPGGGA-------PVSPAKRLAVAPTSEDK------------- 60

Query: 133 ILWFSFQVFTLDVAVLQYQNQKLIQKLEVQKVEYKSLQNKYAQLREKQEPYDMTVAVVKN 192
                     LD  VL+Y+NQKL ++LE  K EY++L+NK+A L+EKQ  ++ T+++V +
Sbjct: 61  ---------KLDFTVLKYKNQKLSEQLEAHKFEYRALENKFAGLKEKQRTHNETLSLVNS 120

Query: 193 CWDELVNGLETSS-VRMRRWRSKQDGEHTISAADGSSSSFEDAVLSRLAETGATQSSSAY 252
            W++LV  L++ S  +     S     H     DG+ +  E   L  L E+GAT+SS   
Sbjct: 121 SWEQLVADLKSRSFCKSGSPNSSPGSGHNNVQKDGTCAPIERDTLRSLVESGATESSGCL 180

Query: 253 SSSKHMEEETESPCEKTKTIERNIEASIENLWYLKDGLHSTLLNELPKDDSFR--NRTSS 312
               H+  +       T     +I     +L    +      L +LP++D  +    TSS
Sbjct: 181 PGC-HLGSDAPPLHLSTANALGDIFFPSSDLLQANEECALAALTKLPENDRSKQLQSTSS 240

Query: 313 DLVKEVKNMRLRVKDFLFKQKVLAKELENHRDLDTKTKAELKVLK 355
           +L+  + N+   + +   K K LA++ +N RD   + +AE + LK
Sbjct: 241 NLLSSLNNVVQALSNLQLKHKQLAEDYQNQRDSSARKRAEHRRLK 255

[Close]
BLAST of Lsi05G021920 vs. Swiss-Prot
Match: BRE1A_ORYSJ (E3 ubiquitin-protein ligase BRE1-like 1 OS=Oryza sativa subsp. japonica GN=BRE1A PE=2 SV=3)

HSP 1 Score: 90.9 bits (224), Expect = 3.6e-17
Identity = 82/285 (28.77%), Postives = 134/285 (47.02%), Query Frame = 1 

Query: 73  MGSTVESDRKRRHFSTISPTAATAKKAPFLPVSEDKKVSPGRRFRFRLLRWVSSVVVCGC 132
           MGST E DRKRR  S+++P           PVS  K+++       +             
Sbjct: 1   MGSTGEPDRKRRLSSSVAPGGGA-------PVSPAKRLAVAPTSEDK------------- 60

Query: 133 ILWFSFQVFTLDVAVLQYQNQKLIQKLEVQKVEYKSLQNKYAQLREKQEPYDMTVAVVKN 192
                     LD  VL+Y+NQKL ++LE  K EY++L+NK+A L+EKQ  ++ T+++V +
Sbjct: 61  ---------KLDFTVLKYKNQKLSEQLEAHKFEYRALENKFAGLKEKQRTHNETLSLVNS 120

Query: 193 CWDELVNGLETSS-VRMRRWRSKQDGEHTISAADGSSSSFEDAVLSRLAETGATQSSSAY 252
            W++LV  L++ S  +     S     H     DG+ +  E   L  L E+GAT+SS   
Sbjct: 121 SWEQLVADLKSRSFCKSGSPNSSPGSGHNNVQKDGTCAPIERDTLRSLVESGATESSGCL 180

Query: 253 SSSKHMEEETESPCEKTKTIERNIEASIENLWYLKDGLHSTLLNELPKDDSFR--NRTSS 312
               H+  +       T     +I     +L    +      L +LP++D  +    TSS
Sbjct: 181 PGC-HLGSDAPPLHLSTANALGDIFFPSSDLLQANEECALAALTKLPENDRSKQLQSTSS 240

Query: 313 DLVKEVKNMRLRVKDFLFKQKVLAKELENHRDLDTKTKAELKVLK 355
           +L+  + N+   + +   K K LA++ +N RD   + +AE + LK
Sbjct: 241 NLLSSLNNVVQALSNLQLKHKQLAEDYQNQRDSSARKRAEHRRLK 255

[Close]
BLAST of Lsi05G021920 vs. Swiss-Prot
Match: BRE1B_ORYSI (E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. indica GN=BRE1B PE=3 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 3.7e-06
Identity = 58/215 (26.98%), Postives = 103/215 (47.91%), Query Frame = 1 

Query: 143 LDVAVLQYQNQKLIQKLEVQKVEYKSLQNKYAQLREKQEPYDMTVAVVKNCWDELVNGLE 202
           +D A LQY+NQKL+Q+LE QK + ++L+ K+ +LR++Q  YD T+  +   W++L++ L 
Sbjct: 1   MDAAALQYENQKLVQQLEAQKSKMRALEGKFKELRDEQCSYDNTLICLNKMWNQLIDDLV 60

Query: 203 TSSVRM-RRWRSKQDGEH-TISAADGSSSSFEDAVLSRLAETGATQSSSAYSSSKHMEEE 262
              VR        Q  +H  +S     S   E+  L RL  +   +++   S SK +EE 
Sbjct: 61  LLGVRAGGDLNGLQALDHEEMSEESLESCPSEEIFLFRLLNSRNFRNNDDSSLSKLVEEA 120

Query: 263 TESPCEKTKTIERNIEASIENLWYLKDGLHSTLLNELPKDDSF-RNRTSSDLVKE-VKNM 322
                  T T+ ++++ +        + L   L  +   +D        +D +KE V N+
Sbjct: 121 LALRYSTTVTLMKSLQEAFAVQQARSESLSLALNGQNSSEDVIVALENHNDYLKEVVDNL 180

Query: 323 RLRVKDFLFKQKVLAKELENHRDLDTKTKAELKVL 354
           R  V     K +    E+E  ++  ++   E+K L
Sbjct: 181 RQAVSIINRKHEKYLDEIEAFKNNQSRELHEVKCL 215

[Close]
BLAST of Lsi05G021920 vs. Swiss-Prot
Match: BRE1B_ORYSJ (E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. japonica GN=BRE1B PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.7e-06
Identity = 58/215 (26.98%), Postives = 103/215 (47.91%), Query Frame = 1 

Query: 143 LDVAVLQYQNQKLIQKLEVQKVEYKSLQNKYAQLREKQEPYDMTVAVVKNCWDELVNGLE 202
           +D A LQY+NQKL+Q+LE QK + ++L+ K+ +LR++Q  YD T+  +   W++L++ L 
Sbjct: 1   MDAAALQYENQKLVQQLEAQKSKMRALEGKFKELRDEQCSYDNTLICLNKMWNQLIDDLV 60

Query: 203 TSSVRM-RRWRSKQDGEH-TISAADGSSSSFEDAVLSRLAETGATQSSSAYSSSKHMEEE 262
              VR        Q  +H  +S     S   E+  L RL  +   +++   S SK +EE 
Sbjct: 61  LLGVRAGGDLNGLQALDHEEMSEESLESCPSEEIFLFRLLNSRNFRNNDDSSLSKLVEEA 120

Query: 263 TESPCEKTKTIERNIEASIENLWYLKDGLHSTLLNELPKDDSF-RNRTSSDLVKE-VKNM 322
                  T T+ ++++ +        + L   L  +   +D        +D +KE V N+
Sbjct: 121 LALRYSTTVTLMKSLQEAFAVQQARSESLSLALNGQNSSEDVIVALENHNDYLKEVVDNL 180

Query: 323 RLRVKDFLFKQKVLAKELENHRDLDTKTKAELKVL 354
           R  V     K +    E+E  ++  ++   E+K L
Sbjct: 181 RQAVSIINRKHEKYLDEIEAFKNNQSRELHEVKCL 215

[Close]
BLAST of Lsi05G021920 vs. TrEMBL
Match: A0A0A0L2Z2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118000 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 1.3e-111
Identity = 225/283 (79.51%), Postives = 236/283 (83.39%), Query Frame = 1 

Query: 73  MGSTVESDRKRRHFSTISPTAATAKKAPFLPVSEDKKVSPGRRFRFRLLRWVSSVVVCGC 132
           MGSTVESDRKRRHFSTISPTAATAKKAPFLPVSEDKK+                      
Sbjct: 1   MGSTVESDRKRRHFSTISPTAATAKKAPFLPVSEDKKLD--------------------- 60

Query: 133 ILWFSFQVFTLDVAVLQYQNQKLIQKLEVQKVEYKSLQNKYAQLREKQEPYDMTVAVVKN 192
           +    +Q            NQKLIQKLEVQKVEYKSLQNKYAQL+EKQEPYD TVAVVKN
Sbjct: 61  VAVLQYQ------------NQKLIQKLEVQKVEYKSLQNKYAQLKEKQEPYDTTVAVVKN 120

Query: 193 CWDELVNGLETSSVRMRRWRSKQDGEHTISAADGSSSSFEDAVLSRLAETGATQSSSAYS 252
           CW+ELVNGLETSSVRMRRWRSK+DGEHTI+  DGSSSSFEDAVLSRLAETGATQSSS YS
Sbjct: 121 CWEELVNGLETSSVRMRRWRSKRDGEHTIAGVDGSSSSFEDAVLSRLAETGATQSSSTYS 180

Query: 253 SSKHMEEETESPCEKTKTIERNIEASIENLWYLKDGLHSTLLNELPKDDSFRNRTSSDLV 312
           SSKHMEEETESPCEKTKTIER+IE SIENLWYLKDGLH+TLLNELPKDDSFR RTS DLV
Sbjct: 181 SSKHMEEETESPCEKTKTIERSIETSIENLWYLKDGLHATLLNELPKDDSFRKRTSGDLV 240

Query: 313 KEVKNMRLRVKDFLFKQKVLAKELENHRDLDTKTKAELKVLKV 356
           KEV+NMRLRVKDFLFKQKVLA+ELE HRDLD KTKAELKVLKV
Sbjct: 241 KEVRNMRLRVKDFLFKQKVLAQELEKHRDLDAKTKAELKVLKV 250

[Close]
BLAST of Lsi05G021920 vs. TrEMBL
Match: M5X1W8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001226mg PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.8e-58
Identity = 134/282 (47.52%), Postives = 178/282 (63.12%), Query Frame = 1 

Query: 73  MGSTVESDRKRRHFSTISPTAATAKKAPFLPVSEDKKVSPGRRFRFRLLRWVSSVVVCGC 132
           MGST E DRKRRHFS++SPTAATAKK PFLP+SEDKK+                      
Sbjct: 1   MGSTGEHDRKRRHFSSLSPTAATAKKQPFLPISEDKKLD--------------------- 60

Query: 133 ILWFSFQVFTLDVAVLQYQNQKLIQKLEVQKVEYKSLQNKYAQLREKQEPYDMTVAVVKN 192
           I    +Q            NQKL+QKLE QKVEY  L+NK++Q+++KQ+PYD T++VV  
Sbjct: 61  IAVLQYQ------------NQKLLQKLETQKVEYSGLENKFSQMKDKQKPYDTTLSVVNK 120

Query: 193 CWDELVNGLETSSVRMRRWRSKQDGEHTISAADGSSSSFEDAVLSRLAETGATQSSSAYS 252
            W+E+VN LE+ S+  R    + D +      DG+ S+ +DA L+RLA+ GAT+SS  Y+
Sbjct: 121 SWEEVVNDLESCSIHSRESSCQHDVKDKSIMDDGAPSALQDAFLNRLAQAGATESSCTYN 180

Query: 253 SSKHMEEETESPCEKTKTIERNIEASIENLWYLKDGLHSTLLNELPKDDSFRNRTSSDLV 312
            S  MEE   +  EKTK I  N+ A+I+N W++KD LH  LL ELP + + R +TSSD  
Sbjct: 181 ISNQMEEGRGTTFEKTKNIIGNVIAAIDNQWHVKDALHDALLKELPDEGTSRQKTSSDFK 240

Query: 313 KEVKNMRLRVKDFLFKQKVLAKELENHRDLDTKTKAELKVLK 355
            EVKN+RL   D   K K+LA+EL++HRD+D K KAEL+ LK
Sbjct: 241 NEVKNLRLAFSDMFVKHKLLARELQSHRDMDAKNKAELRRLK 249

[Close]
BLAST of Lsi05G021920 vs. TrEMBL
Match: A0A061DUG8_THECC (Histone ubiquitination proteins group OS=Theobroma cacao GN=TCM_005636 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.5e-54
Identity = 135/283 (47.70%), Postives = 176/283 (62.19%), Query Frame = 1 

Query: 73  MGSTVESDRKRRHFSTISPTAATAKKAPFLPVSEDKKVSPGRRFRFRLLRWVSSVVVCGC 132
           MGST E+DRKRRHFS+ISPTA  AKK PFLP+SE+K++                      
Sbjct: 1   MGSTGEADRKRRHFSSISPTAVAAKKQPFLPISEEKRLD-------------------AT 60

Query: 133 ILWFSFQVFTLDVAVLQYQNQKLIQKLEVQKVEYKSLQNKYAQLREKQEPYDMTVAVVKN 192
           +L +               NQKLIQKLE QK E  +L+NK +QL+EKQ+PYD T+ VV  
Sbjct: 61  VLQYQ--------------NQKLIQKLEAQKFERSALENKLSQLKEKQKPYDSTLKVVNK 120

Query: 193 CWDELVNGLETSSVRMRRWRSKQDGEHTISAADGSSSSFEDAVLSRLAETGATQSSSAYS 252
            W+ L+  LE+ S   R   S+QD     S  DG+SS  EDA LSRL ETGAT+SSS+ +
Sbjct: 121 SWEALLTDLESCSAHTRE-SSRQDVGCAPSMEDGASSPTEDAFLSRLMETGATESSSSNN 180

Query: 253 SSKHMEEETES-PCEKTKTIERNIEASIENLWYLKDGLHSTLLNELPKDDSFRNRTSSDL 312
             + MEE+ E    EKT+ I  NI  +I NLW+LKDGL++ +LNE PKD S + + SS+L
Sbjct: 181 CPEQMEEDREQIASEKTRNILHNIVIAINNLWHLKDGLYAAVLNEHPKDGSCKQKASSEL 240

Query: 313 VKEVKNMRLRVKDFLFKQKVLAKELENHRDLDTKTKAELKVLK 355
             EVKN+RL + D   K + LA+EL++HRD+D K K ELK +K
Sbjct: 241 ESEVKNLRLAIGDIHLKHRSLARELQSHRDIDAKNKVELKRIK 249

[Close]
BLAST of Lsi05G021920 vs. TrEMBL
Match: U5FPU7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05510g PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.1e-52
Identity = 134/283 (47.35%), Postives = 170/283 (60.07%), Query Frame = 1 

Query: 73  MGSTVESDRKRRHFSTI-SPTAATAKKAPFLPVSEDKKVSPGRRFRFRLLRWVSSVVVCG 132
           MGST E DRKRRHFS+I SPTAA AKK P   +SEDKK+                     
Sbjct: 1   MGSTGEPDRKRRHFSSISSPTAAMAKKQPLSHLSEDKKLDT------------------- 60

Query: 133 CILWFSFQVFTLDVAVLQYQNQKLIQKLEVQKVEYKSLQNKYAQLREKQEPYDMTVAVVK 192
            +L +               NQKL QKLE QKVE+ +L+NK++  +EKQ+PY+ T+  V 
Sbjct: 61  AVLQYQ--------------NQKLQQKLEAQKVEHSALENKFSLQKEKQKPYNSTLKAVN 120

Query: 193 NCWDELVNGLETSSVRMRRWRSKQDGEHTISAADGSSSSFEDAVLSRLAETGATQSSSAY 252
             W+ LV  LET S R R W + QD +H     DG SSS +DA LSRL ETGAT+SSSA 
Sbjct: 121 KSWEVLVTDLETCSNRTREWINGQDVKHVPITRDGGSSSLKDAFLSRLMETGATESSSAT 180

Query: 253 SSSKHMEEETESPCEKTKTIERNIEASIENLWYLKDGLHSTLLNELPKDDSFRNRTSSDL 312
           +    ME + E+  EK K I  N+ A+I  LWYLKDGL + +L +L +DD+ R   S++L
Sbjct: 181 NCPDQMEVDRETAFEKNKRIAHNLVATINGLWYLKDGLRAAVLKQLTEDDACRETISNEL 240

Query: 313 VKEVKNMRLRVKDFLFKQKVLAKELENHRDLDTKTKAELKVLK 355
             E+KN+RL + D   K K LA+EL+NHRD D K KAELK LK
Sbjct: 241 ETELKNLRLGLSDLHLKHKSLARELQNHRDSDAKNKAELKHLK 250

[Close]
BLAST of Lsi05G021920 vs. TrEMBL
Match: U5FSU0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05510g PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.1e-52
Identity = 134/283 (47.35%), Postives = 170/283 (60.07%), Query Frame = 1 

Query: 73  MGSTVESDRKRRHFSTI-SPTAATAKKAPFLPVSEDKKVSPGRRFRFRLLRWVSSVVVCG 132
           MGST E DRKRRHFS+I SPTAA AKK P   +SEDKK+                     
Sbjct: 1   MGSTGEPDRKRRHFSSISSPTAAMAKKQPLSHLSEDKKLDT------------------- 60

Query: 133 CILWFSFQVFTLDVAVLQYQNQKLIQKLEVQKVEYKSLQNKYAQLREKQEPYDMTVAVVK 192
            +L +               NQKL QKLE QKVE+ +L+NK++  +EKQ+PY+ T+  V 
Sbjct: 61  AVLQYQ--------------NQKLQQKLEAQKVEHSALENKFSLQKEKQKPYNSTLKAVN 120

Query: 193 NCWDELVNGLETSSVRMRRWRSKQDGEHTISAADGSSSSFEDAVLSRLAETGATQSSSAY 252
             W+ LV  LET S R R W + QD +H     DG SSS +DA LSRL ETGAT+SSSA 
Sbjct: 121 KSWEVLVTDLETCSNRTREWINGQDVKHVPITRDGGSSSLKDAFLSRLMETGATESSSAT 180

Query: 253 SSSKHMEEETESPCEKTKTIERNIEASIENLWYLKDGLHSTLLNELPKDDSFRNRTSSDL 312
           +    ME + E+  EK K I  N+ A+I  LWYLKDGL + +L +L +DD+ R   S++L
Sbjct: 181 NCPDQMEVDRETAFEKNKRIAHNLVATINGLWYLKDGLRAAVLKQLTEDDACRETISNEL 240

Query: 313 VKEVKNMRLRVKDFLFKQKVLAKELENHRDLDTKTKAELKVLK 355
             E+KN+RL + D   K K LA+EL+NHRD D K KAELK LK
Sbjct: 241 ETELKNLRLGLSDLHLKHKSLARELQNHRDSDAKNKAELKHLK 250

[Close]
BLAST of Lsi05G021920 vs. TAIR10
Match: AT2G44950.1 (AT2G44950.1 histone mono-ubiquitination 1)

HSP 1 Score: 137.9 bits (346), Expect = 1.4e-32
Identity = 105/284 (36.97%), Postives = 150/284 (52.82%), Query Frame = 1 

Query: 73  MGSTVESDRKRRHFSTISPTAATA--KKAPFLPVSEDKKVSPGRRFRFRLLRWVSSVVVC 132
           M ST E DRKRRHFS+ISP+ A A  KK PF                     W SS    
Sbjct: 1   MASTGEPDRKRRHFSSISPSEAAAAVKKQPF--------------------FWPSSED-- 60

Query: 133 GCILWFSFQVFTLDVAVLQYQNQKLIQKLEVQKVEYKSLQNKYAQLREKQEPYDMTVAVV 192
                       LD AVLQ+QN KL QKLE Q+VE   L++K +Q++EKQ PY+ ++  V
Sbjct: 61  -----------KLDTAVLQFQNLKLSQKLEAQQVECSILEDKLSQIKEKQLPYNSSLKTV 120

Query: 193 KNCWDELVNGLETSSVRMRRWRSKQDGEHTISAADGSSSSFEDAVLSRLAETGATQSSSA 252
              W++L   +E+ SVR+    S       ++  DGSS + ++  ++RL ETGAT+SSS+
Sbjct: 121 HKSWEKLTASVESCSVRVSD--SSSGAHRFVNKEDGSSPAVKNDFINRLLETGATESSSS 180

Query: 253 YSSSKHMEEETESPCEKTKTIERNIEASIENLWYLKDGLHSTLLNELPKDDSFRNRTSSD 312
              S  MEE   +   +      N+ A+ E+L  LKD L+ T+L      D       S+
Sbjct: 181 NICSNQMEENGVNTSSQMTQTLYNLVAATEDLRCLKDELYPTVLRTNLGKDLCGQLALSE 240

Query: 313 LVKEVKNMRLRVKDFLFKQKVLAKELENHRDLDTKTKAELKVLK 355
           L  E+K+ R  + D L K K L++EL++HRD D K + +LK ++
Sbjct: 241 LESEIKSFRGDLDDVLVKFKSLSRELQSHRDADAKVRVDLKRIR 249

[Close]
BLAST of Lsi05G021920 vs. NCBI nr
Match: gi|659074805|ref|XP_008437806.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X1 [Cucumis melo])

HSP 1 Score: 418.7 bits (1075), Expect = 1.2e-113
Identity = 229/288 (79.51%), Postives = 241/288 (83.68%), Query Frame = 1 

Query: 73  MGSTVESDRKRRHFSTISPTAATAKKAPFLPVSEDKKVSPGRRFRFRLLRWVSSVVVCGC 132
           MGSTVESDRKRRHFSTISPTAATAKKAPFLP+SEDKK+                      
Sbjct: 1   MGSTVESDRKRRHFSTISPTAATAKKAPFLPISEDKKLD--------------------- 60

Query: 133 ILWFSFQVFTLDVAVLQYQNQKLIQKLEVQKVEYKSLQNKYAQLREKQEPYDMTVAVVKN 192
           +    +Q            NQKLIQKLEVQKVEYKSLQNKYAQL+EKQEPYD TVAVVKN
Sbjct: 61  VAVLQYQ------------NQKLIQKLEVQKVEYKSLQNKYAQLKEKQEPYDTTVAVVKN 120

Query: 193 CWDELVNGLETSSVRMRRWRSKQDGEHTISAADGSSSSFEDAVLSRLAETGATQSSSAYS 252
           CW+ELVNGLETSSVRMRRWRSK+DGEHTI+A DGSSSSFEDAVLSRLAETGATQSSSAYS
Sbjct: 121 CWEELVNGLETSSVRMRRWRSKRDGEHTIAAVDGSSSSFEDAVLSRLAETGATQSSSAYS 180

Query: 253 SSKHMEEETESPCEKTKTIERNIEASIENLWYLKDGLHSTLLNELPKDDSFRNRTSSDLV 312
           SSKHMEEETESPCEKTKTIERNIE SIENLWYLKDGLH+TLL+ELPKDDSFRNRTS DLV
Sbjct: 181 SSKHMEEETESPCEKTKTIERNIETSIENLWYLKDGLHATLLSELPKDDSFRNRTSGDLV 240

Query: 313 KEVKNMRLRVKDFLFKQKVLAKELENHRDLDTKTKAELKVLKVATYSS 361
           KEV+NMRLRVKDFLFKQKVLAKELE HRDLD KTKAELKVLKV   S+
Sbjct: 241 KEVRNMRLRVKDFLFKQKVLAKELEKHRDLDAKTKAELKVLKVELESA 255

[Close]
BLAST of Lsi05G021920 vs. NCBI nr
Match: gi|659074815|ref|XP_008437811.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X3 [Cucumis melo])

HSP 1 Score: 418.7 bits (1075), Expect = 1.2e-113
Identity = 229/288 (79.51%), Postives = 241/288 (83.68%), Query Frame = 1 

Query: 73  MGSTVESDRKRRHFSTISPTAATAKKAPFLPVSEDKKVSPGRRFRFRLLRWVSSVVVCGC 132
           MGSTVESDRKRRHFSTISPTAATAKKAPFLP+SEDKK+                      
Sbjct: 1   MGSTVESDRKRRHFSTISPTAATAKKAPFLPISEDKKLD--------------------- 60

Query: 133 ILWFSFQVFTLDVAVLQYQNQKLIQKLEVQKVEYKSLQNKYAQLREKQEPYDMTVAVVKN 192
           +    +Q            NQKLIQKLEVQKVEYKSLQNKYAQL+EKQEPYD TVAVVKN
Sbjct: 61  VAVLQYQ------------NQKLIQKLEVQKVEYKSLQNKYAQLKEKQEPYDTTVAVVKN 120

Query: 193 CWDELVNGLETSSVRMRRWRSKQDGEHTISAADGSSSSFEDAVLSRLAETGATQSSSAYS 252
           CW+ELVNGLETSSVRMRRWRSK+DGEHTI+A DGSSSSFEDAVLSRLAETGATQSSSAYS
Sbjct: 121 CWEELVNGLETSSVRMRRWRSKRDGEHTIAAVDGSSSSFEDAVLSRLAETGATQSSSAYS 180

Query: 253 SSKHMEEETESPCEKTKTIERNIEASIENLWYLKDGLHSTLLNELPKDDSFRNRTSSDLV 312
           SSKHMEEETESPCEKTKTIERNIE SIENLWYLKDGLH+TLL+ELPKDDSFRNRTS DLV
Sbjct: 181 SSKHMEEETESPCEKTKTIERNIETSIENLWYLKDGLHATLLSELPKDDSFRNRTSGDLV 240

Query: 313 KEVKNMRLRVKDFLFKQKVLAKELENHRDLDTKTKAELKVLKVATYSS 361
           KEV+NMRLRVKDFLFKQKVLAKELE HRDLD KTKAELKVLKV   S+
Sbjct: 241 KEVRNMRLRVKDFLFKQKVLAKELEKHRDLDAKTKAELKVLKVELESA 255

[Close]
BLAST of Lsi05G021920 vs. NCBI nr
Match: gi|449431978|ref|XP_004133777.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 411.4 bits (1056), Expect = 1.9e-111
Identity = 225/283 (79.51%), Postives = 236/283 (83.39%), Query Frame = 1 

Query: 73  MGSTVESDRKRRHFSTISPTAATAKKAPFLPVSEDKKVSPGRRFRFRLLRWVSSVVVCGC 132
           MGSTVESDRKRRHFSTISPTAATAKKAPFLPVSEDKK+                      
Sbjct: 1   MGSTVESDRKRRHFSTISPTAATAKKAPFLPVSEDKKLD--------------------- 60

Query: 133 ILWFSFQVFTLDVAVLQYQNQKLIQKLEVQKVEYKSLQNKYAQLREKQEPYDMTVAVVKN 192
           +    +Q            NQKLIQKLEVQKVEYKSLQNKYAQL+EKQEPYD TVAVVKN
Sbjct: 61  VAVLQYQ------------NQKLIQKLEVQKVEYKSLQNKYAQLKEKQEPYDTTVAVVKN 120

Query: 193 CWDELVNGLETSSVRMRRWRSKQDGEHTISAADGSSSSFEDAVLSRLAETGATQSSSAYS 252
           CW+ELVNGLETSSVRMRRWRSK+DGEHTI+  DGSSSSFEDAVLSRLAETGATQSSS YS
Sbjct: 121 CWEELVNGLETSSVRMRRWRSKRDGEHTIAGVDGSSSSFEDAVLSRLAETGATQSSSTYS 180

Query: 253 SSKHMEEETESPCEKTKTIERNIEASIENLWYLKDGLHSTLLNELPKDDSFRNRTSSDLV 312
           SSKHMEEETESPCEKTKTIER+IE SIENLWYLKDGLH+TLLNELPKDDSFR RTS DLV
Sbjct: 181 SSKHMEEETESPCEKTKTIERSIETSIENLWYLKDGLHATLLNELPKDDSFRKRTSGDLV 240

Query: 313 KEVKNMRLRVKDFLFKQKVLAKELENHRDLDTKTKAELKVLKV 356
           KEV+NMRLRVKDFLFKQKVLA+ELE HRDLD KTKAELKVLKV
Sbjct: 241 KEVRNMRLRVKDFLFKQKVLAQELEKHRDLDAKTKAELKVLKV 250

[Close]
BLAST of Lsi05G021920 vs. NCBI nr
Match: gi|778676709|ref|XP_011650648.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X3 [Cucumis sativus])

HSP 1 Score: 411.4 bits (1056), Expect = 1.9e-111
Identity = 225/283 (79.51%), Postives = 236/283 (83.39%), Query Frame = 1 

Query: 73  MGSTVESDRKRRHFSTISPTAATAKKAPFLPVSEDKKVSPGRRFRFRLLRWVSSVVVCGC 132
           MGSTVESDRKRRHFSTISPTAATAKKAPFLPVSEDKK+                      
Sbjct: 1   MGSTVESDRKRRHFSTISPTAATAKKAPFLPVSEDKKLD--------------------- 60

Query: 133 ILWFSFQVFTLDVAVLQYQNQKLIQKLEVQKVEYKSLQNKYAQLREKQEPYDMTVAVVKN 192
           +    +Q            NQKLIQKLEVQKVEYKSLQNKYAQL+EKQEPYD TVAVVKN
Sbjct: 61  VAVLQYQ------------NQKLIQKLEVQKVEYKSLQNKYAQLKEKQEPYDTTVAVVKN 120

Query: 193 CWDELVNGLETSSVRMRRWRSKQDGEHTISAADGSSSSFEDAVLSRLAETGATQSSSAYS 252
           CW+ELVNGLETSSVRMRRWRSK+DGEHTI+  DGSSSSFEDAVLSRLAETGATQSSS YS
Sbjct: 121 CWEELVNGLETSSVRMRRWRSKRDGEHTIAGVDGSSSSFEDAVLSRLAETGATQSSSTYS 180

Query: 253 SSKHMEEETESPCEKTKTIERNIEASIENLWYLKDGLHSTLLNELPKDDSFRNRTSSDLV 312
           SSKHMEEETESPCEKTKTIER+IE SIENLWYLKDGLH+TLLNELPKDDSFR RTS DLV
Sbjct: 181 SSKHMEEETESPCEKTKTIERSIETSIENLWYLKDGLHATLLNELPKDDSFRKRTSGDLV 240

Query: 313 KEVKNMRLRVKDFLFKQKVLAKELENHRDLDTKTKAELKVLKV 356
           KEV+NMRLRVKDFLFKQKVLA+ELE HRDLD KTKAELKVLKV
Sbjct: 241 KEVRNMRLRVKDFLFKQKVLAQELEKHRDLDAKTKAELKVLKV 250

[Close]
BLAST of Lsi05G021920 vs. NCBI nr
Match: gi|659074813|ref|XP_008437810.1| (PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X2 [Cucumis melo])

HSP 1 Score: 264.2 bits (674), Expect = 3.8e-67
Identity = 139/153 (90.85%), Postives = 145/153 (94.77%), Query Frame = 1 

Query: 208 MRRWRSKQDGEHTISAADGSSSSFEDAVLSRLAETGATQSSSAYSSSKHMEEETESPCEK 267
           MRRWRSK+DGEHTI+A DGSSSSFEDAVLSRLAETGATQSSSAYSSSKHMEEETESPCEK
Sbjct: 1   MRRWRSKRDGEHTIAAVDGSSSSFEDAVLSRLAETGATQSSSAYSSSKHMEEETESPCEK 60

Query: 268 TKTIERNIEASIENLWYLKDGLHSTLLNELPKDDSFRNRTSSDLVKEVKNMRLRVKDFLF 327
           TKTIERNIE SIENLWYLKDGLH+TLL+ELPKDDSFRNRTS DLVKEV+NMRLRVKDFLF
Sbjct: 61  TKTIERNIETSIENLWYLKDGLHATLLSELPKDDSFRNRTSGDLVKEVRNMRLRVKDFLF 120

Query: 328 KQKVLAKELENHRDLDTKTKAELKVLKVATYSS 361
           KQKVLAKELE HRDLD KTKAELKVLKV   S+
Sbjct: 121 KQKVLAKELEKHRDLDAKTKAELKVLKVELESA 153

The following BLAST results are available for this feature:
BLAST of Lsi05G021920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BRE1A_ARATH2.6e-3136.97E3 ubiquitin-protein ligase BRE1-like 1 OS=Arabidopsis thaliana GN=HUB1 PE=1 SV=... [more]
BRE1A_ORYSI3.6e-1728.77E3 ubiquitin-protein ligase BRE1-like 1 OS=Oryza sativa subsp. indica GN=BRE1A P... [more]
BRE1A_ORYSJ3.6e-1728.77E3 ubiquitin-protein ligase BRE1-like 1 OS=Oryza sativa subsp. japonica GN=BRE1A... [more]
BRE1B_ORYSI3.7e-0626.98E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. indica GN=BRE1B P... [more]
BRE1B_ORYSJ3.7e-0626.98E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa subsp. japonica GN=BRE1B... [more]
BLAST of Lsi05G021920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2Z2_CUCSA1.3e-11179.51Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118000 PE=4 SV=1[more]
M5X1W8_PRUPE3.8e-5847.52Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001226mg PE=4 SV=1[more]
A0A061DUG8_THECC7.5e-5447.70Histone ubiquitination proteins group OS=Theobroma cacao GN=TCM_005636 PE=4 SV=1[more]
U5FPU7_POPTR3.1e-5247.35Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05510g PE=4 SV=1[more]
U5FSU0_POPTR3.1e-5247.35Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05510g PE=4 SV=1[more]
BLAST of Lsi05G021920 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44950.11.4e-3236.97 histone mono-ubiquitination 1[more]
BLAST of Lsi05G021920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074805|ref|XP_008437806.1|1.2e-11379.51PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X1 [Cucumis melo][more]
gi|659074815|ref|XP_008437811.1|1.2e-11379.51PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X3 [Cucumis melo][more]
gi|449431978|ref|XP_004133777.1|1.9e-11179.51PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X1 [Cucumis sativus][more]
gi|778676709|ref|XP_011650648.1|1.9e-11179.51PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X3 [Cucumis sativus][more]
gi|659074813|ref|XP_008437810.1|3.8e-6790.85PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0044699 single-organism process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G021920.1Lsi05G021920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 152..179
scor
NoneNo IPR availablePANTHERPTHR23163RING FINGER PROTEIN-RELATEDcoord: 138..354
score: 7.7E-84coord: 73..110
score: 7.7
NoneNo IPR availablePANTHERPTHR23163:SF3E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1coord: 138..354
score: 7.7E-84coord: 73..110
score: 7.7

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G021920Cucumber (Gy14) v1cgylsiB415
Lsi05G021920Cucurbita maxima (Rimu)cmalsiB245
Lsi05G021920Cucurbita maxima (Rimu)cmalsiB766
Lsi05G021920Cucurbita moschata (Rifu)cmolsiB233
Lsi05G021920Cucurbita moschata (Rifu)cmolsiB758
Lsi05G021920Cucurbita pepo (Zucchini)cpelsiB506
Lsi05G021920Cucurbita pepo (Zucchini)cpelsiB714
Lsi05G021920Wild cucumber (PI 183967)cpilsiB207
Lsi05G021920Cucumber (Chinese Long) v2culsiB209
Lsi05G021920Melon (DHL92) v3.5.1lsimeB378
Lsi05G021920Watermelon (Charleston Gray)lsiwcgB335
Lsi05G021920Watermelon (97103) v1lsiwmB365
Lsi05G021920Cucumber (Gy14) v2cgyblsiB196
Lsi05G021920Melon (DHL92) v3.6.1lsimedB396
Lsi05G021920Silver-seed gourdcarlsiB088
Lsi05G021920Silver-seed gourdcarlsiB119
Lsi05G021920Cucumber (Chinese Long) v3cuclsiB228
Lsi05G021920Watermelon (97103) v2lsiwmbB333
Lsi05G021920Wax gourdlsiwgoB433