Lsi05G021160 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G021160
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCyclic nucleotide-gated ion channel, putative
Locationchr05 : 28046395 .. 28047453 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCATTGCTTGCGTTGTCCCTTCCTTCATTGACATATTTTATCTACTTCACATCATCATTGAATTTCGAACAGCTTTTCTGCCCTCTTCTTTACCTGAATCAGGAAGTGCTGAATTAACTCGAGATCTAGCAGTTATAGCAAAGAGATACCTCTCTTCAAACTTCATTATTGATATCTTATCCATTCTCCCACTGCCTCAGGTATAAGTTCAGTATAGTTTCTGGCAGCATCTGGTCTTTGCATTAAGAGCATTACATTTGGCTTATCTTCTCCTTTTGAATGCTAAAGTTCTGGACAACCATTTTTTTAAAGCTCAATCCATAATCTTCTCTTTCTTTTTATTGAACTAACATTTTGTGCTTGTTTTGTTCTATGCTGTTTGAGAGTGGAATATTGTTGAGCCATTTGATTGATTCTTGTGAATCGTTTGTTAAGATAACTTGGTTCTTTGTGTTGTTCAGCTTTTGGTACTAGTTATCGTACCTGCATTGAAAGGCTCGATACCAATGAAGACAAAGAAGTTTGTAAAGATTGCAGTTCTTTTGCAATACATTCCAAGGCTTCTCCGAATTTATCCACTATGCAAAGAAGTAGTCAGAACTTCTGGCATTCTAACAGAAAGCTCAGCTGCCTTCAATCTCCTTATTTATATGCAAGCTAGTCATGTATGTATTAGTTTATTTTATAGCAATTAAATAATCACCAGCTTTTATATTTTGGTTTGAAAAGGACATCTCTTATGAGTACTGCATATGATGAATCAGGTAGTTGGTGCTCTTTGGTATTTATTTTCCGTAGAACAACATGCAAGATGCTGGCTCGAGGCATGTAAGAAAAATAACTGTACCAGCAATTTTCGGTATTGTGGAGATCCGAACAGACAAGCTTACCTGTTTATAGATGCGTATTGCTCTCATAAAGAGTCTGAAGGTGACAATGCCTTTGACTTTGGGATGTATGTTGAAGCCTTTAAGTTCCATTTAACCGAGACGATGAGTTTCGACGTAAATTCATTCATTCTTTCTAGTGGGCTCTGCGAAATGTCAGGTTCGTAA

mRNA sequence

ATGATCATTGCTTGCGTTGTCCCTTCCTTCATTGACATATTTTATCTACTTCACATCATCATTGAATTTCGAACAGCTTTTCTGCCCTCTTCTTTACCTGAATCAGGAAGTGCTGAATTAACTCGAGATCTAGCAGTTATAGCAAAGAGATACCTCTCTTCAAACTTCATTATTGATATCTTATCCATTCTCCCACTGCCTCAGCTTTTGGTACTAGTTATCGTACCTGCATTGAAAGGCTCGATACCAATGAAGACAAAGAAGTTTGTAAAGATTGCAGTTCTTTTGCAATACATTCCAAGGCTTCTCCGAATTTATCCACTATGCAAAGAAGTAGTCAGAACTTCTGGCATTCTAACAGAAAGCTCAGCTGCCTTCAATCTCCTTATTTATATGCAAGCTAGTCATGTAGTTGGTGCTCTTTGGTATTTATTTTCCGTAGAACAACATGCAAGATGCTGGCTCGAGGCATGTAAGAAAAATAACTGTACCAGCAATTTTCGGTATTGTGGAGATCCGAACAGACAAGCTTACCTGTTTATAGATGCGTATTGCTCTCATAAAGAGTCTGAAGGTGACAATGCCTTTGACTTTGGGATGTATGTTGAAGCCTTTAAGTTCCATTTAACCGAGACGATGAGTTTCGACGTAAATTCATTCATTCTTTCTAGTGGGCTCTGCGAAATGTCAGGTTCGTAA

Coding sequence (CDS)

ATGATCATTGCTTGCGTTGTCCCTTCCTTCATTGACATATTTTATCTACTTCACATCATCATTGAATTTCGAACAGCTTTTCTGCCCTCTTCTTTACCTGAATCAGGAAGTGCTGAATTAACTCGAGATCTAGCAGTTATAGCAAAGAGATACCTCTCTTCAAACTTCATTATTGATATCTTATCCATTCTCCCACTGCCTCAGCTTTTGGTACTAGTTATCGTACCTGCATTGAAAGGCTCGATACCAATGAAGACAAAGAAGTTTGTAAAGATTGCAGTTCTTTTGCAATACATTCCAAGGCTTCTCCGAATTTATCCACTATGCAAAGAAGTAGTCAGAACTTCTGGCATTCTAACAGAAAGCTCAGCTGCCTTCAATCTCCTTATTTATATGCAAGCTAGTCATGTAGTTGGTGCTCTTTGGTATTTATTTTCCGTAGAACAACATGCAAGATGCTGGCTCGAGGCATGTAAGAAAAATAACTGTACCAGCAATTTTCGGTATTGTGGAGATCCGAACAGACAAGCTTACCTGTTTATAGATGCGTATTGCTCTCATAAAGAGTCTGAAGGTGACAATGCCTTTGACTTTGGGATGTATGTTGAAGCCTTTAAGTTCCATTTAACCGAGACGATGAGTTTCGACGTAAATTCATTCATTCTTTCTAGTGGGCTCTGCGAAATGTCAGGTTCGTAA

Protein sequence

MIIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDILSILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILTESSAAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKKNNCTSNFRYCGDPNRQAYLFIDAYCSHKESEGDNAFDFGMYVEAFKFHLTETMSFDVNSFILSSGLCEMSGS
Homology
[Close]
BLAST of Lsi05G021160 vs. Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.3e-50
Identity = 108/224 (48.21%), Postives = 145/224 (64.73%), Query Frame = 1 

Query: 2   IIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDIL 61
           I A V+ SF D+FY+LHII +FRT F+  S    G   L  D   IAKRYLSS+FIIDIL
Sbjct: 134 ITASVLRSFTDVFYVLHIIFQFRTGFIAPSSRVFGRGVLVEDKREIAKRYLSSHFIIDIL 193

Query: 62  SILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILTE 121
           ++LPLPQ+++L+I+P ++GS  + TK  +K  V  QYIPR +RIYPL KEV RTSGILTE
Sbjct: 194 AVLPLPQMVILIIIPHMRGSSSLNTKNMLKFIVFFQYIPRFIRIYPLYKEVTRTSGILTE 253

Query: 122 SS---AAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKKNN--CTSNFRYCGDPNRQ 181
           ++   AAFNL +YM ASHV GA WYLFS+E+   CW +AC++NN  C S   YC      
Sbjct: 254 TAWAGAAFNLFLYMLASHVFGAFWYLFSIERETVCWKQACERNNPPCISKLLYCDPETAG 313

Query: 182 AYLFIDAYCSHKESEGDNAFDFGMYVEAFKFHLTETMSFDVNSF 221
              F++  C   ++     FDFG++++A +  + E+  F    F
Sbjct: 314 GNAFLNESCP-IQTPNTTLFDFGIFLDALQSGVVESQDFPQKFF 356

[Close]
BLAST of Lsi05G021160 vs. Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2)

HSP 1 Score: 182.6 bits (462), Expect = 5.0e-45
Identity = 98/221 (44.34%), Postives = 142/221 (64.25%), Query Frame = 1 

Query: 2   IIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDIL 61
           I A ++ + ID FY++HI+ +FRTA++  S    G  EL  D   IA +YLSS FIID+L
Sbjct: 118 IAASLLRTLIDAFYIIHIVFQFRTAYIAPSSRVFGRGELVDDAKAIALKYLSSYFIIDLL 177

Query: 62  SILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILTE 121
           SILPLPQ++VL ++P++   + + TK ++K +++ QY+PR+LR+YPL  EV RTSGI+TE
Sbjct: 178 SILPLPQIVVLAVIPSVNQPVSLLTKDYLKFSIIAQYVPRILRMYPLYTEVTRTSGIVTE 237

Query: 122 SS---AAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKK-NNCTSNFRYCGDPNRQA 181
           ++   AA+NL +YM ASHV GALWYL SVE+  RCW EAC+K   C   F YC +    +
Sbjct: 238 TAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWQEACEKTKGCNMKFLYCENDRNVS 297

Query: 182 YLFIDAYCSHKES---EGDNAFDFGMYVEAFKFHLTETMSF 216
             F+   C   +         F+FG++ +A K  + E+  F
Sbjct: 298 NNFLTTSCPFLDPGDITNSTIFNFGIFTDALKSGVVESHDF 338

[Close]
BLAST of Lsi05G021160 vs. Swiss-Prot
Match: CNGC3_ARATH (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 PE=2 SV=2)

HSP 1 Score: 178.3 bits (451), Expect = 9.5e-44
Identity = 97/225 (43.11%), Postives = 136/225 (60.44%), Query Frame = 1 

Query: 3   IACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDILS 62
           IACV  +FID FY++H++ +F T F+  S    G  EL      IA RYL S F+ID+LS
Sbjct: 123 IACVFRTFIDAFYVVHMLFQFHTGFITPSSSGFGRGELNEKHKDIALRYLGSYFLIDLLS 182

Query: 63  ILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILTES 122
           ILP+PQ++VL IVP ++    +  K+ +K  +  QY+PR+ RIYPL KEV RTSG++TE+
Sbjct: 183 ILPIPQVVVLAIVPRMRRPASLVAKELLKWVIFCQYVPRIARIYPLFKEVTRTSGLVTET 242

Query: 123 S---AAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKK-NNCTSNFRYCGDPNRQAY 182
           +   AA NL +YM ASHV G+ WYL S+E+  RCW EAC K  NCT  + YC        
Sbjct: 243 AWAGAALNLFLYMLASHVFGSFWYLISIERKDRCWREACAKIQNCTHAYLYCSPTGEDNR 302

Query: 183 LFIDAYC---SHKESEGDNAFDFGMYVEAFKFHLTETMSFDVNSF 221
           LF++  C     +E      F+FG++ +A +  + E+  F    F
Sbjct: 303 LFLNGSCPLIDPEEITNSTVFNFGIFADALQSGVVESRDFPKKFF 347

[Close]
BLAST of Lsi05G021160 vs. Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=3 SV=2)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43
Identity = 102/222 (45.95%), Postives = 139/222 (62.61%), Query Frame = 1 

Query: 2   IIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDIL 61
           I A V+ +FID FY++HI+ +FRTA++  S    G  EL  D   IA +YLSS FIID+L
Sbjct: 118 IAASVLRTFIDAFYIIHIVFQFRTAYISPSSRVFGRGELVDDPKAIAIKYLSSYFIIDLL 177

Query: 62  SILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILTE 121
           SILPLPQL+VL ++P +   + + TK ++   +  QYIPR+LRIYPL  EV RTSGI+TE
Sbjct: 178 SILPLPQLVVLAVIPNVNKPVSLITKDYLITVIFTQYIPRILRIYPLYTEVTRTSGIVTE 237

Query: 122 SS---AAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKK--NNCTSNFRYCGDPNRQ 181
           ++   AA+NL +YM ASHV GALWYL SVE+  RCW EAC+K    C   F YC   +  
Sbjct: 238 TAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWREACEKIPEVCNFRFLYCDGNSSV 297

Query: 182 AYLFIDAYC---SHKESEGDNAFDFGMYVEAFKFHLTETMSF 216
              F+   C   +  +      F+FG++ +A K  + E+  F
Sbjct: 298 RNDFLTTSCPFINPDDITNSTVFNFGIFTDALKSGIVESDDF 339

[Close]
BLAST of Lsi05G021160 vs. Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2)

HSP 1 Score: 167.5 bits (423), Expect = 1.7e-40
Identity = 95/227 (41.85%), Postives = 139/227 (61.23%), Query Frame = 1 

Query: 2   IIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDIL 61
           II   + + ID FYL H+ + FRTA++  S    G  EL  D A IAKRYL   FIID+L
Sbjct: 153 IIVTTIRTVIDSFYLFHMALRFRTAYVAPSSRVFGRGELVIDPAQIAKRYLQQYFIIDLL 212

Query: 62  SILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILTE 121
           S+LP+PQ++V   +   +G+  + TK+ ++  VL+QYIPR LR+YPL  E+ RT+G+  E
Sbjct: 213 SVLPVPQIIVWRFLYTSRGANVLATKQALRYIVLVQYIPRFLRMYPLSSELKRTAGVFAE 272

Query: 122 SS---AAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKKN-NCTSNFRYCGDPNRQA 181
           ++   AA+ LL+YM ASH+VGALWYL ++E++  CW +AC  N NCT NF +CG+ N + 
Sbjct: 273 TAWAGAAYYLLLYMLASHIVGALWYLLALERNNDCWSKACHNNQNCTRNFLFCGNQNMKG 332

Query: 182 YL--------FIDAYCSHKESEGDN-AFDFGMYVEAFKFHLTETMSF 216
           Y         ++   C     E +   FDFG+Y+ A    +  + +F
Sbjct: 333 YAAWDNIKVSYLQLKCPVNVPEDEEPPFDFGIYLRALSSGIVSSKNF 379

[Close]
BLAST of Lsi05G021160 vs. TrEMBL
Match: A0A0A0L356_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119630 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.2e-71
Identity = 147/221 (66.52%), Postives = 176/221 (79.64%), Query Frame = 1 

Query: 1   MIIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDI 60
           MIIACV+ SFID+FYLLH+I EFRT +LP SLP  G+ EL +D A IAK+YL SNF+ID 
Sbjct: 119 MIIACVLRSFIDLFYLLHMIFEFRTGYLPPSLPVFGTGELIKDPAKIAKKYLFSNFLIDF 178

Query: 61  LSILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILT 120
           LSI+PLPQLLVLVI+PA KG IP+KTK  +K+A+LLQYIPRLLRIYPL +EV RTSGILT
Sbjct: 179 LSIIPLPQLLVLVIIPAAKGPIPLKTKDAMKMAILLQYIPRLLRIYPLYREVTRTSGILT 238

Query: 121 E---SSAAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKKN--NCTSNFRYCGDPNR 180
           E   S AAFNLLIYM ASHVVGA+WYL S+E+ A+CW++ACK++  NCT  F YCG   R
Sbjct: 239 ETAWSGAAFNLLIYMLASHVVGAVWYLLSIERQAKCWIQACKEDDINCTGEFLYCGTHKR 298

Query: 181 QAYLFIDAYCSHKESE-GDNAFDFGMYVEAFKFHLTETMSF 216
            AY  I+  C  KESE G + F+FG+Y EA KF+LT+TMSF
Sbjct: 299 NAYPSINKTCFPKESEDGKDGFEFGIYAEALKFNLTDTMSF 339

[Close]
BLAST of Lsi05G021160 vs. TrEMBL
Match: A0A0A0L8L1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119640 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.9e-60
Identity = 128/219 (58.45%), Postives = 157/219 (71.69%), Query Frame = 1 

Query: 1   MIIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDI 60
           +IIACV+ +F D+FY+LHII EFRT+FLP SLP  GS EL +D A IAK+YLSSNF+IDI
Sbjct: 111 IIIACVLRTFFDLFYILHIIFEFRTSFLPPSLPVFGSGELIKDPAKIAKKYLSSNFLIDI 170

Query: 61  LSILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILT 120
           LSILPLPQLLVL I+PA K     K++ F+  A +LQYIPR+ RIYPL +EV RTSGILT
Sbjct: 171 LSILPLPQLLVLAILPAAKSYTLAKSRNFLNTANILQYIPRIFRIYPLYREVTRTSGILT 230

Query: 121 E---SSAAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKKNN-CTSNFRYCGDPNRQ 180
           E   S AAFNLLIY+QA HVVGA WY  S+++  RCW   CK +  C  NF YC DP  Q
Sbjct: 231 ETAWSGAAFNLLIYIQAGHVVGAAWYSLSIKRQIRCWFNECKNDKICIHNFLYCEDPKGQ 290

Query: 181 AYLFIDAYCSHKESEGDNAFDFGMYVEAFKFHLTETMSF 216
               ++ YCS ++ E    F+FGM+ +A KF LT T +F
Sbjct: 291 PNSTLNEYCSPRKLEDGKHFEFGMFDQAIKFQLTTTENF 329

[Close]
BLAST of Lsi05G021160 vs. TrEMBL
Match: A0A022RJ21_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a023022mg PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.0e-48
Identity = 103/225 (45.78%), Postives = 145/225 (64.44%), Query Frame = 1 

Query: 2   IIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDIL 61
           IIACV+ SF+D+FY+ HI ++FRT F+       G  EL  D   IAKRYLSS FI+D+L
Sbjct: 124 IIACVLRSFMDLFYIFHIFLQFRTGFIAPCSRIFGRGELVEDAKAIAKRYLSSYFIVDVL 183

Query: 62  SILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILTE 121
           S+LPLPQ+++L+++P++   I + TK  +KI + +QYIPRL R+YPL KEV RTSG+ TE
Sbjct: 184 SVLPLPQVVILIVIPSVSAPISLVTKDLLKIVIFVQYIPRLFRLYPLYKEVTRTSGLFTE 243

Query: 122 ---SSAAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKKNNCTSNFRYCGDPNRQAY 181
              + AAFNL +YM ASHV+GA WYLF++E+  RCW  AC+ N C  +  YCG   +   
Sbjct: 244 TPWAGAAFNLFLYMLASHVLGAFWYLFAIERKDRCWRNACRDNKCNLDDLYCGGEVKGDT 303

Query: 182 LFIDAYC---SHKESEGDNAFDFGMYVEAFKFHLTETMSFDVNSF 221
            F++  C      E + +  FDFG+ ++A +  + E   F    F
Sbjct: 304 SFLNTSCPLLEPNEIKSELDFDFGIVLDALQSRVAEQKDFSRKFF 348

[Close]
BLAST of Lsi05G021160 vs. TrEMBL
Match: A0A067JX85_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14268 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.9e-47
Identity = 106/226 (46.90%), Postives = 143/226 (63.27%), Query Frame = 1 

Query: 4   ACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDILSI 63
           ACV+ +FID+FY+L II +FRT F+  S    G  EL  D  VIA+RYL+SNF+ID++SI
Sbjct: 74  ACVLRTFIDVFYVLRIIFQFRTGFIAPSSRVFGRGELVEDPIVIARRYLTSNFVIDVMSI 133

Query: 64  LPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILTESS 123
           LPLPQ++VL+I+P+LKG + +  K  +K  +L QY+PRL+RIYPL  EV R+SGILTE++
Sbjct: 134 LPLPQVVVLIIIPSLKGPVSLVAKDLLKYIILSQYVPRLMRIYPLFNEVTRSSGILTETA 193

Query: 124 AA---FNLLIYMQASHVVGALWYLFSVEQHARCWLEACKKNNCTSNFRYCGD---PNRQA 183
            A   FNL +YM ASHV+GA WYL SVE+   CW   C+   C SN  YCGD    N   
Sbjct: 194 GAGAIFNLFLYMLASHVIGACWYLLSVERQDNCWRRVCEAPLCRSNDLYCGDHRADNTAL 253

Query: 184 YLFIDAYC---SHKESEGDNAFDFGMYVEAFKFHLTETMSFDVNSF 221
             F+   C      E +    F+FG++ +A    + E+  F    F
Sbjct: 254 STFLKDSCPFIQPDEIKNSTIFNFGLFTDALDSGVVESWDFPKKFF 299

[Close]
BLAST of Lsi05G021160 vs. TrEMBL
Match: R0GPB3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10025973mg PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 6.4e-47
Identity = 105/224 (46.88%), Postives = 142/224 (63.39%), Query Frame = 1 

Query: 2   IIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDIL 61
           I A V+ SF D+FY++HII +FRT F+  S    G   L  D   IAKRYLSS+FIIDIL
Sbjct: 134 ITASVLRSFTDVFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDKGQIAKRYLSSHFIIDIL 193

Query: 62  SILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILTE 121
           ++LPLPQ+++L+++P ++GS  + TK  +K  V  QYIPR +RIYPL KEV RTSGILTE
Sbjct: 194 AVLPLPQMVILIVIPHMRGSPSLNTKNMLKFIVFFQYIPRFIRIYPLYKEVTRTSGILTE 253

Query: 122 SS---AAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKKNN--CTSNFRYCGDPNRQ 181
           ++   AAFNL +YM ASHV GA WYLFS+E+   CW +ACKK    C +   YC      
Sbjct: 254 TAWAGAAFNLFLYMLASHVFGAFWYLFSIERETVCWKQACKKRKSICITELLYCDPKTTV 313

Query: 182 AYLFIDAYCSHKESEGDNAFDFGMYVEAFKFHLTETMSFDVNSF 221
              F++  C   ++     FDFG+++ A +  + E+  F    F
Sbjct: 314 GNAFLNESCP-IQTPNTTLFDFGIFLNALQSGVVESQDFPQKFF 356

[Close]
BLAST of Lsi05G021160 vs. TAIR10
Match: AT5G53130.1 (AT5G53130.1 cyclic nucleotide gated channel 1)

HSP 1 Score: 200.3 bits (508), Expect = 1.3e-51
Identity = 108/224 (48.21%), Postives = 145/224 (64.73%), Query Frame = 1 

Query: 2   IIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDIL 61
           I A V+ SF D+FY+LHII +FRT F+  S    G   L  D   IAKRYLSS+FIIDIL
Sbjct: 134 ITASVLRSFTDVFYVLHIIFQFRTGFIAPSSRVFGRGVLVEDKREIAKRYLSSHFIIDIL 193

Query: 62  SILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILTE 121
           ++LPLPQ+++L+I+P ++GS  + TK  +K  V  QYIPR +RIYPL KEV RTSGILTE
Sbjct: 194 AVLPLPQMVILIIIPHMRGSSSLNTKNMLKFIVFFQYIPRFIRIYPLYKEVTRTSGILTE 253

Query: 122 SS---AAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKKNN--CTSNFRYCGDPNRQ 181
           ++   AAFNL +YM ASHV GA WYLFS+E+   CW +AC++NN  C S   YC      
Sbjct: 254 TAWAGAAFNLFLYMLASHVFGAFWYLFSIERETVCWKQACERNNPPCISKLLYCDPETAG 313

Query: 182 AYLFIDAYCSHKESEGDNAFDFGMYVEAFKFHLTETMSFDVNSF 221
              F++  C   ++     FDFG++++A +  + E+  F    F
Sbjct: 314 GNAFLNESCP-IQTPNTTLFDFGIFLDALQSGVVESQDFPQKFF 356

[Close]
BLAST of Lsi05G021160 vs. TAIR10
Match: AT1G01340.2 (AT1G01340.2 cyclic nucleotide gated channel 10)

HSP 1 Score: 182.6 bits (462), Expect = 2.8e-46
Identity = 98/221 (44.34%), Postives = 142/221 (64.25%), Query Frame = 1 

Query: 2   IIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDIL 61
           I A ++ + ID FY++HI+ +FRTA++  S    G  EL  D   IA +YLSS FIID+L
Sbjct: 118 IAASLLRTLIDAFYIIHIVFQFRTAYIAPSSRVFGRGELVDDAKAIALKYLSSYFIIDLL 177

Query: 62  SILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILTE 121
           SILPLPQ++VL ++P++   + + TK ++K +++ QY+PR+LR+YPL  EV RTSGI+TE
Sbjct: 178 SILPLPQIVVLAVIPSVNQPVSLLTKDYLKFSIIAQYVPRILRMYPLYTEVTRTSGIVTE 237

Query: 122 SS---AAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKK-NNCTSNFRYCGDPNRQA 181
           ++   AA+NL +YM ASHV GALWYL SVE+  RCW EAC+K   C   F YC +    +
Sbjct: 238 TAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWQEACEKTKGCNMKFLYCENDRNVS 297

Query: 182 YLFIDAYCSHKES---EGDNAFDFGMYVEAFKFHLTETMSF 216
             F+   C   +         F+FG++ +A K  + E+  F
Sbjct: 298 NNFLTTSCPFLDPGDITNSTIFNFGIFTDALKSGVVESHDF 338

[Close]
BLAST of Lsi05G021160 vs. TAIR10
Match: AT2G46430.1 (AT2G46430.1 cyclic nucleotide gated channel 3)

HSP 1 Score: 178.3 bits (451), Expect = 5.3e-45
Identity = 97/225 (43.11%), Postives = 136/225 (60.44%), Query Frame = 1 

Query: 3   IACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDILS 62
           IACV  +FID FY++H++ +F T F+  S    G  EL      IA RYL S F+ID+LS
Sbjct: 123 IACVFRTFIDAFYVVHMLFQFHTGFITPSSSGFGRGELNEKHKDIALRYLGSYFLIDLLS 182

Query: 63  ILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILTES 122
           ILP+PQ++VL IVP ++    +  K+ +K  +  QY+PR+ RIYPL KEV RTSG++TE+
Sbjct: 183 ILPIPQVVVLAIVPRMRRPASLVAKELLKWVIFCQYVPRIARIYPLFKEVTRTSGLVTET 242

Query: 123 S---AAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKK-NNCTSNFRYCGDPNRQAY 182
           +   AA NL +YM ASHV G+ WYL S+E+  RCW EAC K  NCT  + YC        
Sbjct: 243 AWAGAALNLFLYMLASHVFGSFWYLISIERKDRCWREACAKIQNCTHAYLYCSPTGEDNR 302

Query: 183 LFIDAYC---SHKESEGDNAFDFGMYVEAFKFHLTETMSFDVNSF 221
           LF++  C     +E      F+FG++ +A +  + E+  F    F
Sbjct: 303 LFLNGSCPLIDPEEITNSTVFNFGIFADALQSGVVESRDFPKKFF 347

[Close]
BLAST of Lsi05G021160 vs. TAIR10
Match: AT4G01010.1 (AT4G01010.1 cyclic nucleotide-gated channel 13)

HSP 1 Score: 177.9 bits (450), Expect = 7.0e-45
Identity = 102/222 (45.95%), Postives = 139/222 (62.61%), Query Frame = 1 

Query: 2   IIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDIL 61
           I A V+ +FID FY++HI+ +FRTA++  S    G  EL  D   IA +YLSS FIID+L
Sbjct: 118 IAASVLRTFIDAFYIIHIVFQFRTAYISPSSRVFGRGELVDDPKAIAIKYLSSYFIIDLL 177

Query: 62  SILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILTE 121
           SILPLPQL+VL ++P +   + + TK ++   +  QYIPR+LRIYPL  EV RTSGI+TE
Sbjct: 178 SILPLPQLVVLAVIPNVNKPVSLITKDYLITVIFTQYIPRILRIYPLYTEVTRTSGIVTE 237

Query: 122 SS---AAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKK--NNCTSNFRYCGDPNRQ 181
           ++   AA+NL +YM ASHV GALWYL SVE+  RCW EAC+K    C   F YC   +  
Sbjct: 238 TAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWREACEKIPEVCNFRFLYCDGNSSV 297

Query: 182 AYLFIDAYC---SHKESEGDNAFDFGMYVEAFKFHLTETMSF 216
              F+   C   +  +      F+FG++ +A K  + E+  F
Sbjct: 298 RNDFLTTSCPFINPDDITNSTVFNFGIFTDALKSGIVESDDF 339

[Close]
BLAST of Lsi05G021160 vs. TAIR10
Match: AT2G23980.1 (AT2G23980.1 cyclic nucleotide-gated channel 6)

HSP 1 Score: 167.5 bits (423), Expect = 9.4e-42
Identity = 95/227 (41.85%), Postives = 139/227 (61.23%), Query Frame = 1 

Query: 2   IIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDIL 61
           II   + + ID FYL H+ + FRTA++  S    G  EL  D A IAKRYL   FIID+L
Sbjct: 153 IIVTTIRTVIDSFYLFHMALRFRTAYVAPSSRVFGRGELVIDPAQIAKRYLQQYFIIDLL 212

Query: 62  SILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILTE 121
           S+LP+PQ++V   +   +G+  + TK+ ++  VL+QYIPR LR+YPL  E+ RT+G+  E
Sbjct: 213 SVLPVPQIIVWRFLYTSRGANVLATKQALRYIVLVQYIPRFLRMYPLSSELKRTAGVFAE 272

Query: 122 SS---AAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKKN-NCTSNFRYCGDPNRQA 181
           ++   AA+ LL+YM ASH+VGALWYL ++E++  CW +AC  N NCT NF +CG+ N + 
Sbjct: 273 TAWAGAAYYLLLYMLASHIVGALWYLLALERNNDCWSKACHNNQNCTRNFLFCGNQNMKG 332

Query: 182 YL--------FIDAYCSHKESEGDN-AFDFGMYVEAFKFHLTETMSF 216
           Y         ++   C     E +   FDFG+Y+ A    +  + +F
Sbjct: 333 YAAWDNIKVSYLQLKCPVNVPEDEEPPFDFGIYLRALSSGIVSSKNF 379

[Close]
BLAST of Lsi05G021160 vs. NCBI nr
Match: gi|659074989|ref|XP_008437904.1| (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 369.0 bits (946), Expect = 6.0e-99
Identity = 194/218 (88.99%), Postives = 197/218 (90.37%), Query Frame = 1 

Query: 1   MIIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDI 60
           MIIAC++ SFIDIFYLLHII EFRT FLPSSLPE GSAEL R LA IAKRYLSSNF IDI
Sbjct: 101 MIIACILRSFIDIFYLLHIIFEFRTGFLPSSLPEPGSAELIRGLADIAKRYLSSNFTIDI 160

Query: 61  LSILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILT 120
           LSILPLPQLLVLVI PALKGS PMKTKKFVKIAVLLQYIPRLLRIYPL KEVVRTSGILT
Sbjct: 161 LSILPLPQLLVLVITPALKGSFPMKTKKFVKIAVLLQYIPRLLRIYPLYKEVVRTSGILT 220

Query: 121 E---SSAAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKKNNCTSNFRYCGDPNRQA 180
           E   S AAFNLLIY+QASHVVGALWYLFSVEQ ARCW EACKK NCTSNF YCGDPN QA
Sbjct: 221 ERAWSGAAFNLLIYLQASHVVGALWYLFSVEQQARCWHEACKKINCTSNFLYCGDPNGQA 280

Query: 181 YLFIDAYCSHKESEGDNAFDFGMYVEAFKFHLTETMSF 216
           YLFIDAYCSHKESEGDNAFDFGMY EAFKFHLTETMSF
Sbjct: 281 YLFIDAYCSHKESEGDNAFDFGMYAEAFKFHLTETMSF 318

[Close]
BLAST of Lsi05G021160 vs. NCBI nr
Match: gi|659074993|ref|XP_008437906.1| (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 369.0 bits (946), Expect = 6.0e-99
Identity = 194/218 (88.99%), Postives = 197/218 (90.37%), Query Frame = 1 

Query: 1   MIIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDI 60
           MIIAC++ SFIDIFYLLHII EFRT FLPSSLPE GSAEL R LA IAKRYLSSNF IDI
Sbjct: 101 MIIACILRSFIDIFYLLHIIFEFRTGFLPSSLPEPGSAELIRGLADIAKRYLSSNFTIDI 160

Query: 61  LSILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILT 120
           LSILPLPQLLVLVI PALKGS PMKTKKFVKIAVLLQYIPRLLRIYPL KEVVRTSGILT
Sbjct: 161 LSILPLPQLLVLVITPALKGSFPMKTKKFVKIAVLLQYIPRLLRIYPLYKEVVRTSGILT 220

Query: 121 E---SSAAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKKNNCTSNFRYCGDPNRQA 180
           E   S AAFNLLIY+QASHVVGALWYLFSVEQ ARCW EACKK NCTSNF YCGDPN QA
Sbjct: 221 ERAWSGAAFNLLIYLQASHVVGALWYLFSVEQQARCWHEACKKINCTSNFLYCGDPNGQA 280

Query: 181 YLFIDAYCSHKESEGDNAFDFGMYVEAFKFHLTETMSF 216
           YLFIDAYCSHKESEGDNAFDFGMY EAFKFHLTETMSF
Sbjct: 281 YLFIDAYCSHKESEGDNAFDFGMYAEAFKFHLTETMSF 318

[Close]
BLAST of Lsi05G021160 vs. NCBI nr
Match: gi|778676921|ref|XP_011650688.1| (PREDICTED: cyclic nucleotide-gated ion channel 1-like [Cucumis sativus])

HSP 1 Score: 276.9 bits (707), Expect = 3.1e-71
Identity = 147/221 (66.52%), Postives = 176/221 (79.64%), Query Frame = 1 

Query: 1   MIIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDI 60
           MIIACV+ SFID+FYLLH+I EFRT +LP SLP  G+ EL +D A IAK+YL SNF+ID 
Sbjct: 119 MIIACVLRSFIDLFYLLHMIFEFRTGYLPPSLPVFGTGELIKDPAKIAKKYLFSNFLIDF 178

Query: 61  LSILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILT 120
           LSI+PLPQLLVLVI+PA KG IP+KTK  +K+A+LLQYIPRLLRIYPL +EV RTSGILT
Sbjct: 179 LSIIPLPQLLVLVIIPAAKGPIPLKTKDAMKMAILLQYIPRLLRIYPLYREVTRTSGILT 238

Query: 121 E---SSAAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKKN--NCTSNFRYCGDPNR 180
           E   S AAFNLLIYM ASHVVGA+WYL S+E+ A+CW++ACK++  NCT  F YCG   R
Sbjct: 239 ETAWSGAAFNLLIYMLASHVVGAVWYLLSIERQAKCWIQACKEDDINCTGEFLYCGTHKR 298

Query: 181 QAYLFIDAYCSHKESE-GDNAFDFGMYVEAFKFHLTETMSF 216
            AY  I+  C  KESE G + F+FG+Y EA KF+LT+TMSF
Sbjct: 299 NAYPSINKTCFPKESEDGKDGFEFGIYAEALKFNLTDTMSF 339

[Close]
BLAST of Lsi05G021160 vs. NCBI nr
Match: gi|659074995|ref|XP_008437907.1| (PREDICTED: cyclic nucleotide-gated ion channel 1 [Cucumis melo])

HSP 1 Score: 276.9 bits (707), Expect = 3.1e-71
Identity = 147/221 (66.52%), Postives = 177/221 (80.09%), Query Frame = 1 

Query: 1   MIIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDI 60
           +IIACV+ SFID+FYLLH+I EFRT FLP SLP  GS EL +D   IAK+YL SNF+ID 
Sbjct: 119 IIIACVLRSFIDLFYLLHMIFEFRTGFLPPSLPVFGSGELIKDPVKIAKKYLFSNFLIDF 178

Query: 61  LSILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILT 120
           LSI+PLPQLLVL I+PA+KG IP+KTK  VK+AVLLQYIPRLLRIYPL +EV RTSGILT
Sbjct: 179 LSIIPLPQLLVLAIIPAVKGPIPLKTKDAVKMAVLLQYIPRLLRIYPLYREVTRTSGILT 238

Query: 121 E---SSAAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKKN--NCTSNFRYCGDPNR 180
           E   S AAFNLLIYM ASHVVGA+WYL S+E+ A+CW++ACK++  NCT+ F YCG+  R
Sbjct: 239 ETAWSGAAFNLLIYMLASHVVGAIWYLLSIERQAKCWVQACKEDDINCTAKFLYCGNHKR 298

Query: 181 QAYLFIDAYCSHKESE-GDNAFDFGMYVEAFKFHLTETMSF 216
            AY  I+  C  K+SE G + F+FG+Y EA KF+LT+TMSF
Sbjct: 299 NAYPSINKTCFPKDSEDGKDGFEFGIYAEALKFNLTDTMSF 339

[Close]
BLAST of Lsi05G021160 vs. NCBI nr
Match: gi|659074987|ref|XP_008437903.1| (PREDICTED: cyclic nucleotide-gated ion channel 1-like [Cucumis melo])

HSP 1 Score: 254.6 bits (649), Expect = 1.7e-64
Identity = 134/219 (61.19%), Postives = 162/219 (73.97%), Query Frame = 1 

Query: 1   MIIACVVPSFIDIFYLLHIIIEFRTAFLPSSLPESGSAELTRDLAVIAKRYLSSNFIIDI 60
           MIIACV+ SF D+FY+LHII EFRT FLP SLP  GS EL +D A IAK+YLSSNF+IDI
Sbjct: 111 MIIACVLRSFFDLFYILHIIFEFRTGFLPPSLPVFGSGELIKDPAKIAKKYLSSNFLIDI 170

Query: 61  LSILPLPQLLVLVIVPALKGSIPMKTKKFVKIAVLLQYIPRLLRIYPLCKEVVRTSGILT 120
           LSILPLPQLLVL I+PA KG  P+K++ F+ IA +LQYIPR+ RIYPL +EV RTSGILT
Sbjct: 171 LSILPLPQLLVLAILPAAKGYTPLKSRNFLNIANILQYIPRIFRIYPLYREVTRTSGILT 230

Query: 121 E---SSAAFNLLIYMQASHVVGALWYLFSVEQHARCWLEACKKNN-CTSNFRYCGDPNRQ 180
           E   S AAFNLLIY+QA HVVGA+WY  S+++  +CW   CK +N C  NF YC DP  Q
Sbjct: 231 ETAWSGAAFNLLIYIQAGHVVGAVWYSLSIKRQIKCWFNECKNDNKCLHNFLYCEDPKGQ 290

Query: 181 AYLFIDAYCSHKESEGDNAFDFGMYVEAFKFHLTETMSF 216
               I+ YCS ++ +    F+FGM+ EA KF LT T +F
Sbjct: 291 TNSTINEYCSPRKLDDGKHFEFGMFDEALKFQLTTTTNF 329

The following BLAST results are available for this feature:
BLAST of Lsi05G021160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CNGC1_ARATH2.3e-5048.21Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1[more]
CNG10_ARATH5.0e-4544.34Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC1... [more]
CNGC3_ARATH9.5e-4443.11Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 ... [more]
CNG13_ARATH1.2e-4345.95Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC1... [more]
CNGC6_ARATH1.7e-4041.85Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 ... [more]
BLAST of Lsi05G021160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L356_CUCSA2.2e-7166.52Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119630 PE=4 SV=1[more]
A0A0A0L8L1_CUCSA3.9e-6058.45Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119640 PE=4 SV=1[more]
A0A022RJ21_ERYGU2.0e-4845.78Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a023022mg... [more]
A0A067JX85_JATCU2.9e-4746.90Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14268 PE=4 SV=1[more]
R0GPB3_9BRAS6.4e-4746.88Uncharacterized protein OS=Capsella rubella GN=CARUB_v10025973mg PE=4 SV=1[more]
BLAST of Lsi05G021160 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G53130.11.3e-5148.21 cyclic nucleotide gated channel 1[more]
AT1G01340.22.8e-4644.34 cyclic nucleotide gated channel 10[more]
AT2G46430.15.3e-4543.11 cyclic nucleotide gated channel 3[more]
AT4G01010.17.0e-4545.95 cyclic nucleotide-gated channel 13[more]
AT2G23980.19.4e-4241.85 cyclic nucleotide-gated channel 6[more]
BLAST of Lsi05G021160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074989|ref|XP_008437904.1|6.0e-9988.99PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo][more]
gi|659074993|ref|XP_008437906.1|6.0e-9988.99PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis melo][more]
gi|778676921|ref|XP_011650688.1|3.1e-7166.52PREDICTED: cyclic nucleotide-gated ion channel 1-like [Cucumis sativus][more]
gi|659074995|ref|XP_008437907.1|3.1e-7166.52PREDICTED: cyclic nucleotide-gated ion channel 1 [Cucumis melo][more]
gi|659074987|ref|XP_008437903.1|1.7e-6461.19PREDICTED: cyclic nucleotide-gated ion channel 1-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005216ion channel activity
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006816 calcium ion transport
biological_process GO:0034220 ion transmembrane transport
biological_process GO:0006813 potassium ion transport
biological_process GO:0006811 ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0008076 voltage-gated potassium channel complex
cellular_component GO:0016020 membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0030551 cyclic nucleotide binding
molecular_function GO:0005221 intracellular cyclic nucleotide activated cation channel activity
molecular_function GO:0005242 inward rectifier potassium channel activity
molecular_function GO:0005216 ion channel activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G021160.1Lsi05G021160.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 3..215
score: 3.7
NoneNo IPR availableGENE3DG3DSA:1.10.287.70coord: 7..147
score: 8.
NoneNo IPR availablePANTHERPTHR10217VOLTAGE AND LIGAND GATED POTASSIUM CHANNELcoord: 192..206
score: 7.9E-69coord: 1..150
score: 7.9
NoneNo IPR availablePANTHERPTHR10217:SF465CYCLIC NUCLEOTIDE-GATED ION CHANNEL 11-RELATEDcoord: 1..150
score: 7.9E-69coord: 192..206
score: 7.9
NoneNo IPR availableunknownSSF81324Voltage-gated potassium channelscoord: 6..149
score: 4.87

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi05G021160CsGy3G008130Cucumber (Gy14) v2cgyblsiB196
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi05G021160Lsi09G000290Bottle gourd (USVL1VR-Ls)lsilsiB014
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G021160Bottle gourd (USVL1VR-Ls)lsilsiB158
Lsi05G021160Cucumber (Gy14) v1cgylsiB139
Lsi05G021160Cucumber (Gy14) v1cgylsiB349
Lsi05G021160Cucumber (Gy14) v1cgylsiB415
Lsi05G021160Cucurbita maxima (Rimu)cmalsiB000
Lsi05G021160Cucurbita maxima (Rimu)cmalsiB245
Lsi05G021160Cucurbita maxima (Rimu)cmalsiB320
Lsi05G021160Cucurbita maxima (Rimu)cmalsiB321
Lsi05G021160Cucurbita maxima (Rimu)cmalsiB583
Lsi05G021160Cucurbita maxima (Rimu)cmalsiB759
Lsi05G021160Cucurbita maxima (Rimu)cmalsiB838
Lsi05G021160Cucurbita moschata (Rifu)cmolsiB233
Lsi05G021160Cucurbita moschata (Rifu)cmolsiB308
Lsi05G021160Cucurbita moschata (Rifu)cmolsiB310
Lsi05G021160Cucurbita moschata (Rifu)cmolsiB557
Lsi05G021160Cucurbita moschata (Rifu)cmolsiB758
Lsi05G021160Cucurbita moschata (Rifu)cmolsiB822
Lsi05G021160Cucurbita pepo (Zucchini)cpelsiB506
Lsi05G021160Cucurbita pepo (Zucchini)cpelsiB626
Lsi05G021160Cucurbita pepo (Zucchini)cpelsiB714
Lsi05G021160Wild cucumber (PI 183967)cpilsiB207
Lsi05G021160Wild cucumber (PI 183967)cpilsiB298
Lsi05G021160Wild cucumber (PI 183967)cpilsiB382
Lsi05G021160Cucumber (Chinese Long) v2culsiB209
Lsi05G021160Cucumber (Chinese Long) v2culsiB298
Lsi05G021160Cucumber (Chinese Long) v2culsiB378
Lsi05G021160Melon (DHL92) v3.5.1lsimeB336
Lsi05G021160Melon (DHL92) v3.5.1lsimeB375
Lsi05G021160Melon (DHL92) v3.5.1lsimeB378
Lsi05G021160Melon (DHL92) v3.5.1lsimeB387
Lsi05G021160Watermelon (Charleston Gray)lsiwcgB325
Lsi05G021160Watermelon (Charleston Gray)lsiwcgB334
Lsi05G021160Watermelon (Charleston Gray)lsiwcgB335
Lsi05G021160Watermelon (97103) v1lsiwmB364
Lsi05G021160Watermelon (97103) v1lsiwmB365
Lsi05G021160Watermelon (97103) v1lsiwmB375
Lsi05G021160Cucumber (Gy14) v2cgyblsiB274
Lsi05G021160Cucumber (Gy14) v2cgyblsiB345
Lsi05G021160Melon (DHL92) v3.6.1lsimedB353
Lsi05G021160Melon (DHL92) v3.6.1lsimedB396
Lsi05G021160Melon (DHL92) v3.6.1lsimedB408
Lsi05G021160Silver-seed gourdcarlsiB110
Lsi05G021160Silver-seed gourdcarlsiB907
Lsi05G021160Cucumber (Chinese Long) v3cuclsiB228
Lsi05G021160Cucumber (Chinese Long) v3cuclsiB318
Lsi05G021160Cucumber (Chinese Long) v3cuclsiB402
Lsi05G021160Watermelon (97103) v2lsiwmbB319
Lsi05G021160Watermelon (97103) v2lsiwmbB332
Lsi05G021160Watermelon (97103) v2lsiwmbB333
Lsi05G021160Wax gourdlsiwgoB419
Lsi05G021160Wax gourdlsiwgoB433
Lsi05G021160Wax gourdlsiwgoB439