Lsi05G020040 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCGAACTGCTTCCCAATTTTTACTCTCTTTTCGTTTTCATAATCATCTCGTTTGAGCTTATCTTTCTCTACCAAATCTCTGTCCCTCTGATTCTCCACAACCTTTTCTTGGGGGACACTTTCGGTTTCCGATGGAAGTAAGCACTCATAAATTTCTCACTTTCTTCTAAATTTTACTTCTCATTCTCTCTTCTTATCGCCACTCATTAGCTTCTTCTTTTAATTTCATAAAATGGGTATCTGTTAGTCATTTCATTCGGATTTTTTTTTGCTGAAAAATGATGGGAAATTCTTAGTGATTGCCTCGTTTTTCTGATTATTCTCTTTGATTTTTTTATGTTTTTCCCCATTTTCTTTAATCTTCTGAGGTGTTCTTTCGTTGTTTGCATTTTTGTGAGTTGGGGGTTTTGAATGAATTCTGTTCCATGGTTCTTAAATGGGGCTTTAGTTTTCTCCTTTCATTGTTCCTCTGTCGAGGAAGTTTTGATTTTGCATTGTGATTGAAGTTTTTCGTTTCGAGGGGTTAATTCCAGCGCTATAATTGTATGTTTTATTGTTTTTATTTTAAATTTTTGTATGTTCGAGCCCTTTTGGTTCATGGGTTATGAGAATTTTGAATTTGTATCAGTATGTGATGGGGGAATTATAAGTTATGTTTTTCCCCCTTTTCAACTCAGGTCTAAATTTTGGAAGCTGCTGGATTTTCTTATGCTAAGTTGCCAGAAATGGAGGTCCGTTTGGATTTCTTGGAGTTGCTTCAACCCGACATGTCGAGAAAGATTTTAATGTGCTTGGATGATATTTCTGATATTGTTCGCGCGAGTGCCGTCTCACGATGTTGGCAACAATTGGGTGAGTACACGAGTTAGAAGTCCATCTCAACTTTCATTGTTGATTAAAATGTAGATGTAATGTATTCATGATATTATTGACAGATCCATGTAACATATGATTTAGTTCAGATATGTGGAGTGATCAAGGAAAAGTAAATAATAATGAGAAGAAGTTTGAGTGATGGAAATAACCCAATAGAATTGCGATTTGTGAAGAAGGTTTGATACAGAGTGATGCTAAGAAGAAAGAGAGAGAGGAAACCTTATACTTTCATTCTATTGACAGGCTTTATGTTTTACTTTATGCAGTGATTGAAAATGGTCTGTCGAAGCAGCTCTGCTTTAGATCATTCCCTCATTTGTCTAGAGTAGCTTTGATTGTTGAAGTAAACAACTCGGAAGTGAATGGGAACAAAGAAGTAGCATGTAGTAGTTCAAGAGATTCCAAATCTGTGCAGAGGGATCACAGAGTTTATGCTTATCTTGCACATGCTTCTACATCATTTCTTTTGAGAAATTGCATTTCAGAGGCAATTATTGCTTCTAGCACTGATAATGACCCTGAGGAAAGCATTAATAACACCTTGGACGCAAGAGAACTCGTTGCAAGGAGAGCTTCTTATTGGTCAAGTAAAGGACAGTTTAAACCTGATGTACCAGAGACTCTGATATACAAATTGGTCTCCAATTTATGTGTTGTAACTGAAATTAATATACGACCTTTCCGAGGTATTTCTTTGGATACTCTCTTATTCGTTATCAAATTTGATTTCATACTTCAAATATGGTATTTTCACCTTCTACATTGTTTGCTTATTTGATGAAGTCTATTTTCATGTCCAGCATTTTTTCAGCCAGGTTCACCTATATACTCAGCGAAAGCTGTGCGATTTCGATTTGGTCACTTAAAATATGTCATGGATCTTAGGAGTGATCTGGTTGGGGAGTCGCACTGTGGATCTGCAAAAGAAACATTTATATGGACGTATACTTCTCCAGAATTTCCAATGGCTCAGGTATGTCCTAAGTCTATGCTTTCCTAATGCATTCTGCGTTCTCTTATTGTTAAATCCCATTTCCTTTTCGAAGTACCCATCATTCTGCTATTGGAAACGTTTTTATATTTTAGTTGGGTCAATCACTTAAGGTTATAGTTTCAACTTCTAGTCATTTATGCAGCATAATACTCTGTCCGTGATCTTGAGCCTTGTTTAATTAGTTATTCCACATATCTGAGATGAGAATTTGATAACTTCGATCTCTTGTTTCCGTTTTAAAAAAAGAAAATTGATAACTTCTATCAGTTTCCAGCTTTCATCAGCTATCAGATTGTTGGAGCTCTGATTTGTAGTACATATTACAAGAATGGTGTTATATTTGATTCACTTGAACATGGAATCCATGAAATTTAGATATAATGTAATAGTTTCAAATTTTGCATGGGTATTTCGTTCCTCGTATTATTATTTGGAACAATTCTGTAACTGACTGGTCAAATGACATCTTATTGAACAGGATAATTGTTTGCAGAAGTTCAAACTTCCTGAACCTGTTCTTTGCATAGGAGGTATTTTGCAAATTGAGCTGCTTGGCAGGGTACAAAGACAAGAAACAGATGCTTTGTTCTACATATGGTATGTATCTTCAGTAGTATATATTACTTTTTCCTTCTGCCTGTTTTATGTAACACTCTGCAAATACACATTGAAAGATTGATTATTATTTTTTTACCTTCTTGAGAGATAAAATAAGAGAAACTTCCTTTAGATAAAGCAAAGTGCGATGAGAAGGGAAATGAGATATTGCTAGTGATATGAGATTAAATTTTCCTTCACTCATGAAGTTAAGCTTTTAGGTCAATTGGCGATTTAACATGGTATCAGGTAGTCTAAGAGGTCTTGTGTTTAAGCCTTTGTAATGTTATTTCCTCCCCATTTAATATTGATTTTCACTTGTTGGGCATTCTTCATATTTCACGCCTATAGTGAAGGGGAGTGTTAGTGATATGACATTAAATTTGCTTTCACCCATGAGCTTAAGTTTTTGGGTCAATCGGCGAGTTAACAGATATCAAATCTAAAGCTTAAGGGATTACAAAAAAAATTTCCTCTAATTGGCTTTACCTTGGAATCCAAAAAACCATACCATCCAAACTTTTTCATTTTAGGATTTTTCATTGCAAGTTTTTAGTTCTCTTTAGTCTTTCCTAAAAGACTTCCCAAACAGCCATTTCATTTGTGTACACATTTACTTTTAGCTTGAAAGAGTTACCAAGAAAAGGCTACCCCATGAATGTTACATCAGAAGGGGCGAACCTAAAAATATTGAAGACGTTGAAAGTGAAACAAGAGCCACGACTTTTGAGTAAAGTGGCAATGGAAATAACAATTAATTTTGAGTTTCTCCCTTTTTGTGGTTAAATGCGTAGCAAGTTAGAAAATTTGAAGATTAGGATTTCTCTTGCAATGCACAGATGTCATGTGTTGGATTTAGACAATCTTTAATGGGGAAGAGACACACTCATGACAGTGACAAAAAATAAAAGTACTTTACAAAAATTCTACTAATAATAGCATCCTGCTGATTAATATTTTGGTGGCACCTTGGCAACAGACTAGAAGTTGAGAACTCTCCAAGAACAAGTGTACATCCCTATTCCTAACAACTAGAGTTCTTCCATTTATCAAATCTTTATGTATCCTTATCAATAACAGCATTCTAAGGATTCACCTGTTTTGTGCTATCCCCAAAACCAAGCTAGGATAATTCCCAATTACCAATTATGCTATATAAGGCTGGATATTCTTGGATGAATGTGTTCGAAGTCGAGTCCTTAAGTTGTCTGCAACCTTACTGTTATCTGATCTTTTATTTCTGCTATAGATGAACATATTCATCTGTAAAATGAGACATAACCATTCAGGATAGCCTATGGTAAAACAAGACGGATGTGCAACTATAATATGGAAGCTGTAGTTTCTTTACATGAGATGATTCTAATAACCTTTTATATGCAGTATTAAGTTATATTTTGTTGCATCCTGAACTAATGATGTCTTAACAACTCATGTTTCCCCTGCAGTGTTTCTCATGTTCAAGTTATCGGGCGGCCGTTGTCGCCTGCATTCGATATCGAAATCCTTGAACCGTCATGGGAGTTTATTTTAAAATGTAACCATCAGGCGAAGACTTCTAACCAATTAAGCATGCTTGAGAATGAGCCACGCACGATCCTTCCCACGTATTTGGGGAGACGTGTAATCGAATTACGACAGATTGTGAATATGCTTCGGGGAAATGTAGTTCAAGGTGAGTATAATGCTTGGGGTGAGGAAGAAGATGAATCAGATGAAGATTTTGTTGCTTGAATCAATGTTCTTGTCCCAAAAATGAAGAAAAGAGGAAGATTGTTGTTTGTAATTTTCTACCATTGCCTTAAAACTGAAATCCCAACCATCCAGAATTGTGACAAATAATCTGTGCATACTATATTTTGCTGGTTTGTGTATATGAATGTGAAAAGCACAGCTCCTTTTTTGTTGCTTCATATCATAATATTGGAGTTTAGTAAATAATCAGTAGTATTACCCCCACACTTTAAAG CTTCGAACTGCTTCCCAATTTTTACTCTCTTTTCGTTTTCATAATCATCTCGTTTGAGCTTATCTTTCTCTACCAAATCTCTGTCCCTCTGATTCTCCACAACCTTTTCTTGGGGGACACTTTCGGTTTCCGATGGAAGTCTAAATTTTGGAAGCTGCTGGATTTTCTTATGCTAAGTTGCCAGAAATGGAGGTCCGTTTGGATTTCTTGGAGTTGCTTCAACCCGACATGTCGAGAAAGATTTTAATGTGCTTGGATGATATTTCTGATATTGTTCGCGCGAGTGCCGTCTCACGATGTTGGCAACAATTGGTGATTGAAAATGGTCTGTCGAAGCAGCTCTGCTTTAGATCATTCCCTCATTTGTCTAGAGTAGCTTTGATTGTTGAAGTAAACAACTCGGAAGTGAATGGGAACAAAGAAGTAGCATGTAGTAGTTCAAGAGATTCCAAATCTGTGCAGAGGGATCACAGAGTTTATGCTTATCTTGCACATGCTTCTACATCATTTCTTTTGAGAAATTGCATTTCAGAGGCAATTATTGCTTCTAGCACTGATAATGACCCTGAGGAAAGCATTAATAACACCTTGGACGCAAGAGAACTCGTTGCAAGGAGAGCTTCTTATTGGTCAAGTAAAGGACAGTTTAAACCTGATGTACCAGAGACTCTGATATACAAATTGGTCTCCAATTTATGTGTTGTAACTGAAATTAATATACGACCTTTCCGAGCATTTTTTCAGCCAGGTTCACCTATATACTCAGCGAAAGCTGTGCGATTTCGATTTGGTCACTTAAAATATGTCATGGATCTTAGGAGTGATCTGGTTGGGGAGTCGCACTGTGGATCTGCAAAAGAAACATTTATATGGACGTATACTTCTCCAGAATTTCCAATGGCTCAGGATAATTGTTTGCAGAAGTTCAAACTTCCTGAACCTGTTCTTTGCATAGGAGGTATTTTGCAAATTGAGCTGCTTGGCAGGGTACAAAGACAAGAAACAGATGCTTTGTTCTACATATGTGTTTCTCATGTTCAAGTTATCGGGCGGCCGTTGTCGCCTGCATTCGATATCGAAATCCTTGAACCGTCATGGGAGTTTATTTTAAAATGTAACCATCAGGCGAAGACTTCTAACCAATTAAGCATGCTTGAGAATGAGCCACGCACGATCCTTCCCACGTATTTGGGGAGACGTGTAATCGAATTACGACAGATTGTGAATATGCTTCGGGGAAATGTAGTTCAAGGTGAGTATAATGCTTGGGGTGAGGAAGAAGATGAATCAGATGAAGATTTTGTTGCTTGAATCAATGTTCTTGTCCCAAAAATGAAGAAAAGAGGAAGATTGTTGTTTGTAATTTTCTACCATTGCCTTAAAACTGAAATCCCAACCATCCAGAATTGTGACAAATAATCTGTGCATACTATATTTTGCTGGTTTGTGTATATGAATGTGAAAAGCACAGCTCCTTTTTTGTTGCTTCATATCATAATATTGGAGTTTAGTAAATAATCAGTAGTATTACCCCCACACTTTAAAG ATGGAGGTCCGTTTGGATTTCTTGGAGTTGCTTCAACCCGACATGTCGAGAAAGATTTTAATGTGCTTGGATGATATTTCTGATATTGTTCGCGCGAGTGCCGTCTCACGATGTTGGCAACAATTGGTGATTGAAAATGGTCTGTCGAAGCAGCTCTGCTTTAGATCATTCCCTCATTTGTCTAGAGTAGCTTTGATTGTTGAAGTAAACAACTCGGAAGTGAATGGGAACAAAGAAGTAGCATGTAGTAGTTCAAGAGATTCCAAATCTGTGCAGAGGGATCACAGAGTTTATGCTTATCTTGCACATGCTTCTACATCATTTCTTTTGAGAAATTGCATTTCAGAGGCAATTATTGCTTCTAGCACTGATAATGACCCTGAGGAAAGCATTAATAACACCTTGGACGCAAGAGAACTCGTTGCAAGGAGAGCTTCTTATTGGTCAAGTAAAGGACAGTTTAAACCTGATGTACCAGAGACTCTGATATACAAATTGGTCTCCAATTTATGTGTTGTAACTGAAATTAATATACGACCTTTCCGAGCATTTTTTCAGCCAGGTTCACCTATATACTCAGCGAAAGCTGTGCGATTTCGATTTGGTCACTTAAAATATGTCATGGATCTTAGGAGTGATCTGGTTGGGGAGTCGCACTGTGGATCTGCAAAAGAAACATTTATATGGACGTATACTTCTCCAGAATTTCCAATGGCTCAGGATAATTGTTTGCAGAAGTTCAAACTTCCTGAACCTGTTCTTTGCATAGGAGGTATTTTGCAAATTGAGCTGCTTGGCAGGGTACAAAGACAAGAAACAGATGCTTTGTTCTACATATGTGTTTCTCATGTTCAAGTTATCGGGCGGCCGTTGTCGCCTGCATTCGATATCGAAATCCTTGAACCGTCATGGGAGTTTATTTTAAAATGTAACCATCAGGCGAAGACTTCTAACCAATTAAGCATGCTTGAGAATGAGCCACGCACGATCCTTCCCACGTATTTGGGGAGACGTGTAATCGAATTACGACAGATTGTGAATATGCTTCGGGGAAATGTAGTTCAAGGTGAGTATAATGCTTGGGGTGAGGAAGAAGATGAATCAGATGAAGATTTTGTTGCTTGA MEVRLDFLELLQPDMSRKILMCLDDISDIVRASAVSRCWQQLVIENGLSKQLCFRSFPHLSRVALIVEVNNSEVNGNKEVACSSSRDSKSVQRDHRVYAYLAHASTSFLLRNCISEAIIASSTDNDPEESINNTLDARELVARRASYWSSKGQFKPDVPETLIYKLVSNLCVVTEINIRPFRAFFQPGSPIYSAKAVRFRFGHLKYVMDLRSDLVGESHCGSAKETFIWTYTSPEFPMAQDNCLQKFKLPEPVLCIGGILQIELLGRVQRQETDALFYICVSHVQVIGRPLSPAFDIEILEPSWEFILKCNHQAKTSNQLSMLENEPRTILPTYLGRRVIELRQIVNMLRGNVVQGEYNAWGEEEDESDEDFVA
BLAST of Lsi05G020040 vs. Swiss-Prot
Match: FB345_ARATH (F-box protein At4g00755 OS=Arabidopsis thaliana GN=At4g00755 PE=2 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 3.4e-83 Identity = 166/367 (45.23%), Postives = 231/367 (62.94%), Query Frame = 1
BLAST of Lsi05G020040 vs. TrEMBL
Match: A0A0A0L4A9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124240 PE=4 SV=1) HSP 1 Score: 689.1 bits (1777), Expect = 3.0e-195 Identity = 340/367 (92.64%), Postives = 355/367 (96.73%), Query Frame = 1
BLAST of Lsi05G020040 vs. TrEMBL
Match: M5X1E8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006742mg PE=4 SV=1) HSP 1 Score: 417.2 bits (1071), Expect = 2.2e-113 Identity = 216/373 (57.91%), Postives = 270/373 (72.39%), Query Frame = 1
BLAST of Lsi05G020040 vs. TrEMBL
Match: A0A067K0W8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14459 PE=4 SV=1) HSP 1 Score: 416.4 bits (1069), Expect = 3.7e-113 Identity = 224/371 (60.38%), Postives = 272/371 (73.32%), Query Frame = 1
BLAST of Lsi05G020040 vs. TrEMBL
Match: A0A059CI07_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02242 PE=4 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 7.2e-109 Identity = 215/373 (57.64%), Postives = 267/373 (71.58%), Query Frame = 1
BLAST of Lsi05G020040 vs. TrEMBL
Match: A0A0D2TC56_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G095400 PE=4 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 4.7e-108 Identity = 220/374 (58.82%), Postives = 270/374 (72.19%), Query Frame = 1
BLAST of Lsi05G020040 vs. TAIR10
Match: AT4G00755.1 (AT4G00755.1 F-box family protein) HSP 1 Score: 310.1 bits (793), Expect = 1.9e-84 Identity = 166/367 (45.23%), Postives = 231/367 (62.94%), Query Frame = 1
BLAST of Lsi05G020040 vs. NCBI nr
Match: gi|659075344|ref|XP_008438095.1| (PREDICTED: F-box protein At4g00755 [Cucumis melo]) HSP 1 Score: 696.0 bits (1795), Expect = 3.5e-197 Identity = 342/367 (93.19%), Postives = 356/367 (97.00%), Query Frame = 1
BLAST of Lsi05G020040 vs. NCBI nr
Match: gi|449432193|ref|XP_004133884.1| (PREDICTED: F-box protein At4g00755 [Cucumis sativus]) HSP 1 Score: 689.1 bits (1777), Expect = 4.3e-195 Identity = 340/367 (92.64%), Postives = 355/367 (96.73%), Query Frame = 1
BLAST of Lsi05G020040 vs. NCBI nr
Match: gi|596000766|ref|XP_007218107.1| (hypothetical protein PRUPE_ppa006742mg [Prunus persica]) HSP 1 Score: 417.2 bits (1071), Expect = 3.1e-113 Identity = 216/373 (57.91%), Postives = 270/373 (72.39%), Query Frame = 1
BLAST of Lsi05G020040 vs. NCBI nr
Match: gi|802697105|ref|XP_012083480.1| (PREDICTED: F-box protein At4g00755 [Jatropha curcas]) HSP 1 Score: 416.4 bits (1069), Expect = 5.3e-113 Identity = 224/371 (60.38%), Postives = 272/371 (73.32%), Query Frame = 1
BLAST of Lsi05G020040 vs. NCBI nr
Match: gi|645253771|ref|XP_008232731.1| (PREDICTED: F-box protein At4g00755 isoform X1 [Prunus mume]) HSP 1 Score: 415.6 bits (1067), Expect = 9.1e-113 Identity = 214/368 (58.15%), Postives = 268/368 (72.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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