Lsi05G019870 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G019870
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionGlyoxylate/hydroxypyruvate reductase B
Locationchr05 : 26966030 .. 26968369 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATGGAAAGGCAAGGCAAGGAGCTTCCTCAAGTTTTGGTTTTAGGCCTTCCCTGGATATTCTCAACTCTCGAATCCCAATTCCCAAACAAGTTCCATTTTCTAAAGCCATGGCATTCTCAACTACCCCTACACAAATTCCTCAATTCTTATGCCCAATCCACACAAGCCTTGATCATGCCTGTCATTAATACACTCAACTCCGCCATTCTCGACTGCCTCCCGGCGCTGAAGCTCGTCGTTACTACCAGCGCCGGTGTCGATCACTTGAACTTGGCTGAGTTACGGGGCCGTGGGATAGCCATTGCCTATGCAAGAAACTTGTACTCTGAAGATGTGGCCGATATGGCGGTTGGATTACTAATCGATGTTCTTAGAAAGGTCTCGGCAGGAGACCGGTTCGTGAAGCAACACCTTTGGCCTACTAAACCGGATTTTCCTCTCGGATTAAAGGTGCAATTCTTCTTTTTTTTCTTTATCTAATTGCAATTTGGGAGAGTCGTGTGACTGACCAAAAATTTGGGCCCGAAATGAAATATGCTCTACCATTTAAAACACAAGTTTTTTTTATCTACCAAAACCGATCATTTTGCATGTGGATTAAGATATAGCTCTCTCTCTTTTGAGTTTTAGGTTTTTTAGCTCGATCTCATTATTTTCTTTCACTCTTCTCGCTTCTCTCATTCTTTTGAGTTTTGAATTTTGTGCTCCTCACTCTCTCAATTTTCTCTTTCCTTCCTTTTGGTTTAGAACTTTATGCTCCTTGCCCTTTATTTTCTTTTTCTCTCACACTCGCCTCTCTCATCCCTTTGGATTGAATTATTTTCTCTACTCTTTCTATCTTGCTCTTGCCTTTTAATCCATAATAGCCCGACCTTACACCACAATAAGGTCGTTTTGGTAATTTTTACAAATGATGATGAAAGCAAAAAGTTTATTTAAAAAAACTTATTAATACATGGGGCATATTTTATTTTGAACCCAAAATTTGGTTTGACTGTACAATTATCTCTTGCAATTTCCTCTATTTATTAGCTTTTTTGTTGTTTACATTTTAAGAGTGTTTAAAATTTAAGTCAAATTTTGAAAGAAAATTTGTAACGAAAGATTTTGCAAATATAGCAAAATATATATAGTTTTGACAAATCATAGTTAGTTATCAATAATAAACTCCTACTACTAATAGACTACCCTTCTTAAAAGTCTATCAATGATAATTTCTAAAACTAAAATAGCTTATTAGAATAATATTTCTTCATTACTTTTGTTCAACTAGAATTCATGAGTGATAACAATCTATCAATGATAGTTACTAAAAGACTTCAACGCATATATAATTCTATCAACAATACAAGTCTATCAGTGAGACATTGATAACTCCAATACAATTCTAATAATAATATAAGTCTATGATTGAACTAAACTATCAATAATAAAAATTTCTCAGTGATAGATGTTGATAGAATTCAATACATATAGAATATCAACCATATAAACCTATCACTAATAGACTTCTAACTTGACAGTTTATCAAAAGTCTATCATTTATAAACTTCAATCATTCTTATGAGTGTTTTTTGAGGGCTAACCATCTTTTCAGACTTTGTACATGGTCATTTAGATTTTACTATTTTTACACATAGTTTTAGGTTCTATTATTTTTTTTCTATTAATTTAGTTGATTTAGCTATATAAGCAACTGACCCAATTTGAAAACCTAAAAAAAATAGTTTTAAAAAACTTACTTTTGATTTTAGAACTTGGCTTAAGATTCAAATTTTTAAATAGGAAAGATGAAAATTGTTATTAAATGGAGCAAATGAATGGCTAGTTAGTCAATTTGGATGCTCTTTTTTGTTTTTATTATTTTATTGATGAATTTGAAGGTTAAAGAATTTTCACAGTTGAGCGGCAAGCAAATTGGGATTGTTGGACTAGGGGAAAATAGGCTCTGAAGTTGCCAAAAGGCTGGAGGGTTTTGGTTGCAGAATCTCATATAACTCAAGAGCCAAAAAGCCATTAGTGTCATACTCCTACTATTCCAATGTACGTGAACTTGCAACCAACTGTGAAGTCCTCATCATTTGTTGTGGTTTAACTGAAGAAACCCACCATATGATTAACAGGGAAGTGATGCTAGCATTAGGAAAAAATGGAGTGATAATCAACATTGGTCGCGGAGCGGTCATCGACGAGAAGGAGATGATTCAATGTCTGGTTGAAGGGGAGACTGGGGGTGCTGGCCTGGATGTGTTTGAGTTCGAACCCGAAATTCCGAAACAGCTCTTTACACTTGATAATGTTGTGTTGTCACGACATGCTGCTATCACAACATGA

mRNA sequence

ATGGCAATGGAAAGGCAAGGCAAGGAGCTTCCTCAAGTTTTGGTTTTAGGCCTTCCCTGGATATTCTCAACTCTCGAATCCCAATTCCCAAACAAGTTCCATTTTCTAAAGCCATGGCATTCTCAACTACCCCTACACAAATTCCTCAATTCTTATGCCCAATCCACACAAGCCTTGATCATGCCTGTCATTAATACACTCAACTCCGCCATTCTCGACTGCCTCCCGGCGCTGAAGCTCGTCGTTACTACCAGCGCCGGTGTCGATCACTTGAACTTGGCTGAGTTACGGGGCCGTGGGATAGCCATTGCCTATGCAAGAAACTTGTACTCTGAAGATGTGGCCGATATGGCGGTTGGATTACTAATCGATGTTCTTAGAAAGGTCTCGGCAGGAGACCGAATCTCATATAACTCAAGAGCCAAAAAGCCATTAGTGTCATACTCCTACTATTCCAATGTACGTGAACTTGCAACCAACTGTGAAGTCCTCATCATTTGTTGTGGTTTAACTGAAGAAACCCACCATATGATTAACAGGGAAGTGATGCTAGCATTAGGAAAAAATGGAGTGATAATCAACATTGGTCGCGGAGCGGTCATCGACGAGAAGGAGATGATTCAATGTCTGGTTGAAGGGGAGACTGGGGGTGCTGGCCTGGATGTGTTTGAGTTCGAACCCGAAATTCCGAAACAGCTCTTTACACTTGATAATGTTGTGTTGTCACGACATGCTGCTATCACAACATGA

Coding sequence (CDS)

ATGGCAATGGAAAGGCAAGGCAAGGAGCTTCCTCAAGTTTTGGTTTTAGGCCTTCCCTGGATATTCTCAACTCTCGAATCCCAATTCCCAAACAAGTTCCATTTTCTAAAGCCATGGCATTCTCAACTACCCCTACACAAATTCCTCAATTCTTATGCCCAATCCACACAAGCCTTGATCATGCCTGTCATTAATACACTCAACTCCGCCATTCTCGACTGCCTCCCGGCGCTGAAGCTCGTCGTTACTACCAGCGCCGGTGTCGATCACTTGAACTTGGCTGAGTTACGGGGCCGTGGGATAGCCATTGCCTATGCAAGAAACTTGTACTCTGAAGATGTGGCCGATATGGCGGTTGGATTACTAATCGATGTTCTTAGAAAGGTCTCGGCAGGAGACCGAATCTCATATAACTCAAGAGCCAAAAAGCCATTAGTGTCATACTCCTACTATTCCAATGTACGTGAACTTGCAACCAACTGTGAAGTCCTCATCATTTGTTGTGGTTTAACTGAAGAAACCCACCATATGATTAACAGGGAAGTGATGCTAGCATTAGGAAAAAATGGAGTGATAATCAACATTGGTCGCGGAGCGGTCATCGACGAGAAGGAGATGATTCAATGTCTGGTTGAAGGGGAGACTGGGGGTGCTGGCCTGGATGTGTTTGAGTTCGAACCCGAAATTCCGAAACAGCTCTTTACACTTGATAATGTTGTGTTGTCACGACATGCTGCTATCACAACATGA

Protein sequence

MAMERQGKELPQVLVLGLPWIFSTLESQFPNKFHFLKPWHSQLPLHKFLNSYAQSTQALIMPVINTLNSAILDCLPALKLVVTTSAGVDHLNLAELRGRGIAIAYARNLYSEDVADMAVGLLIDVLRKVSAGDRISYNSRAKKPLVSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVIINIGRGAVIDEKEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAAITT
Homology
[Close]
BLAST of Lsi05G019870 vs. Swiss-Prot
Match: HPR3_ARATH (Glyoxylate/hydroxypyruvate reductase HPR3 OS=Arabidopsis thaliana GN=HPR3 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-38
Identity = 76/123 (61.79%), Postives = 97/123 (78.86%), Query Frame = 1 

Query: 127 RKVSAGDRISYNSRAKKPLVSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLAL 186
           R  S G  ISYNSR++K    Y YYS++  LA N +VL++CC LT+ETHH++NREVM  L
Sbjct: 170 RLESFGCVISYNSRSQKQSSPYRYYSDILSLAENNDVLVLCCSLTDETHHIVNREVMELL 229

Query: 187 GKNGVIINIGRGAVIDEKEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAA 246
           GK+GV+IN+GRG +IDEKEM++CLV+G  GGAGLDVFE EP +P++LF LDNVVLS H A
Sbjct: 230 GKDGVVINVGRGKLIDEKEMVKCLVDGVIGGAGLDVFENEPAVPQELFGLDNVVLSPHFA 289

Query: 247 ITT 250
           + T
Sbjct: 290 VAT 292

[Close]
BLAST of Lsi05G019870 vs. Swiss-Prot
Match: HPPR_PLESU (Hydroxyphenylpyruvate reductase OS=Plectranthus scutellarioides GN=HPPR PE=1 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-32
Identity = 68/115 (59.13%), Postives = 87/115 (75.65%), Query Frame = 1 

Query: 135 ISYNSRAKKPLVSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVIIN 194
           ISY SR+KKP  +Y+YY +V ELA+N ++L++ C LT ET H+INREV+ ALG  GV+IN
Sbjct: 170 ISYFSRSKKPNTNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLIN 229

Query: 195 IGRGAVIDEKEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAAITT 250
           IGRG  +DE E++  LVEG  GGAGLDVFE EPE+P++LF L+NVVL  H    T
Sbjct: 230 IGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVPEKLFGLENVVLLPHVGSGT 284

[Close]
BLAST of Lsi05G019870 vs. Swiss-Prot
Match: HPR2_ARATH (Glyoxylate/hydroxypyruvate reductase A HPR2 OS=Arabidopsis thaliana GN=HPR2 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.4e-29
Identity = 62/115 (53.91%), Postives = 83/115 (72.17%), Query Frame = 1 

Query: 135 ISYNSRAKKPLVSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVIIN 194
           I+Y SR  KP V+Y YY  V +LA N ++L++ C LTE+T H+++R+VM ALG  GV+IN
Sbjct: 170 INYYSRTIKPDVAYKYYPTVVDLAQNSDILVVACPLTEQTRHIVDRQVMDALGAKGVLIN 229

Query: 195 IGRGAVIDEKEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAAITT 250
           IGRG  +DE+E+I+ L EG  GGA LDVFE EP +P++LF L+NVVL  H    T
Sbjct: 230 IGRGPHVDEQELIKALTEGRLGGAALDVFEQEPHVPEELFGLENVVLLPHVGSGT 284

[Close]
BLAST of Lsi05G019870 vs. Swiss-Prot
Match: 2KGR_GLUOX (2-ketogluconate reductase OS=Gluconobacter oxydans (strain 621H) GN=GOX0417 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-23
Identity = 73/226 (32.30%), Postives = 108/226 (47.79%), Query Frame = 1 

Query: 69  SAILDCLPALKLVVTTSAGVDHLNLAELRGRGIAIAYARNLYSEDVADMAVGLLIDVLRK 128
           S I+D LP L+++     G D +NL E R R I +A  +N  ++DVADMAV L++ V+R 
Sbjct: 56  SEIMDALPNLEVISVNGVGTDRINLDEARRRNIGVAITQNTLTDDVADMAVALMMAVMRS 115

Query: 129 VSAGD---RISYNSRAKKPL-----------------------------VSYSYYS---- 188
           +   D   R      A  PL                             +  +Y++    
Sbjct: 116 IVTNDAFVRAGKWPSATAPLGRSLTRKKVGIAGFGHIGQAIAKRVSAFGMEVAYFNSHAR 175

Query: 189 ---------NVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVIINIGRGAVIDE 248
                    +++ LAT C+VLI+       + +MI+R+ + ALGK+G ++NI RG V+DE
Sbjct: 176 PESTCHFEPDLKALATWCDVLILAVSGGPRSANMIDRDTLDALGKDGFLVNIARGTVVDE 235

Query: 249 KEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAAITT 250
             ++  L E    GAGLDVF+ EP I     +L N VL  H A  T
Sbjct: 236 AALLSALQEKRIAGAGLDVFQNEPNINPAFLSLPNTVLQAHQASAT 281

[Close]
BLAST of Lsi05G019870 vs. Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.7e-19
Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 1 

Query: 95  ELRGRGIA----IAYARNLYSEDVADMAVGLLIDVL--RKVSAGDRISYNSRAKKPLVSY 154
           E + RG+A    +    ++Y   +  +  G +   +  R    G RI YNSR +KP V  
Sbjct: 130 EWKKRGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIARRAKGFGMRILYNSRTRKPEVEK 189

Query: 155 SY---YSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVIINIGRGAVIDEKE 214
                +  + EL    + +++   LT+ET+HMIN E +  +    +++NI RG V+D + 
Sbjct: 190 ELGAEFMPLDELLKESDFVVLVVPLTKETYHMINEERLKLMKPTAILVNIARGKVVDTEA 249

Query: 215 MIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAAITT 250
           +++ L EG   GAGLDVFE EP   ++LF+LDNVVL+ H    T
Sbjct: 250 LVKALREGWIAGAGLDVFEEEPYYHEELFSLDNVVLAPHIGSAT 293

[Close]
BLAST of Lsi05G019870 vs. TrEMBL
Match: A0A0A0L908_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124900 PE=3 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.5e-78
Identity = 173/296 (58.45%), Postives = 195/296 (65.88%), Query Frame = 1 

Query: 1   MAMERQGKELPQVLVLGLPWIFSTLESQFPNKFHFLKPWHSQLPLHKFLNSYAQSTQALI 60
           MAME + KELP+VLVLG PW+FSTLESQFPNKFH+LKPW SQLPLH+FL SYAQSTQAL+
Sbjct: 1   MAMEGESKELPEVLVLGPPWVFSTLESQFPNKFHYLKPWLSQLPLHQFLTSYAQSTQALL 60

Query: 61  MPVINTLNSAI-------------------------------------------LDCLPA 120
           +PV   LNS I                                            D    
Sbjct: 61  IPVSPPLNSPILDCLPSLKLVVTVSAGVEHLNFAELRGRGIAVAYAGNVFSEDVADMAVG 120

Query: 121 LKLVVT--TSAGVDHLNLAELRGRGIAIAYARNLYSEDVADMAVGLL-IDVLRKVSA-GD 180
           L + V    SAG D      L+           L  + +  + +G +  +V +++   G 
Sbjct: 121 LLIDVLRKVSAG-DRFVKQRLQPIKPDFPLRSKLSGKQIGIVGLGKIGSEVAKRLEGFGC 180

Query: 181 RISYNSRAKKPLVSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVII 240
           RISYNSR KKPLVSYSYYSNV ELATNCEVLIICCGLTEETHHMINREVML LGK+GVII
Sbjct: 181 RISYNSRTKKPLVSYSYYSNVHELATNCEVLIICCGLTEETHHMINREVMLELGKDGVII 240

Query: 241 NIGRGAVIDEKEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAAITT 250
           NIGRGAVIDEKEMI+CL+EGE GGAGLDVFEFEPEIPKQLFTLDNVVLS H A+TT
Sbjct: 241 NIGRGAVIDEKEMIRCLIEGEIGGAGLDVFEFEPEIPKQLFTLDNVVLSPHTAVTT 295

[Close]
BLAST of Lsi05G019870 vs. TrEMBL
Match: M5XK89_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025117mg PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.2e-72
Identity = 152/296 (51.35%), Postives = 193/296 (65.20%), Query Frame = 1 

Query: 1   MAMERQGKELPQVLVLGLPWIFSTLESQFPNKFHFLKPWHSQLPLHKFLNSYAQSTQALI 60
           MA+     ELPQVLVL  P  F+ LES + +KF FLK W S LP  +FL ++A S QAL+
Sbjct: 1   MALNGNHSELPQVLVLLPPGCFTLLESNYSHKFKFLKAWDSPLPQDQFLATHAGSVQALL 60

Query: 61  MPVIN-TLNSAILDCLPALKLVVTTSAGVDHLNLAELRGRGIAIAYARNLYSEDVADMAV 120
                 T+ + IL  LP+LK++VTTS G+DHL+LAE R RG+AIA    +++EDVADMAV
Sbjct: 61  SSANGPTITANILQMLPSLKVIVTTSVGIDHLDLAECRSRGVAIASTPKIFTEDVADMAV 120

Query: 121 GLLIDVLRKVSAGDRI-------------------------------------------- 180
           GLL+DV+RK+SAGDR                                             
Sbjct: 121 GLLLDVMRKISAGDRYVRDGLWATRGDYALGSKIGGKRVGIVGLGNIGLEVAKRLEAFGC 180

Query: 181 --SYNSRAKKPLVSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVII 240
              YNSR +KP VSY +YS++ ELA N + L+ICC LT ETHH+IN++V+LALG++GVI+
Sbjct: 181 NILYNSRTEKPFVSYPFYSDICELAANSDALVICCALTAETHHLINKKVLLALGRDGVIV 240

Query: 241 NIGRGAVIDEKEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAAITT 250
           NIGRGA+IDEKEM++CLV GE GGAGLDVFE EPE+P++LF LDNVVLS H A  T
Sbjct: 241 NIGRGAIIDEKEMVRCLVIGEIGGAGLDVFEDEPEVPEELFALDNVVLSPHYATYT 296

[Close]
BLAST of Lsi05G019870 vs. TrEMBL
Match: E6NU31_JATCU (JHL05D22.12 protein OS=Jatropha curcas GN=JHL05D22.12 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.7e-69
Identity = 148/290 (51.03%), Postives = 191/290 (65.86%), Query Frame = 1 

Query: 8   KELPQVLVLGLPWIFSTLESQF--PNKFHFLKPWHSQLPLHKFLNSYAQSTQALIMPVIN 67
           ++LP+VL+L  P  F   E +     KF +LK + S LPLH+FL ++AQS QA++     
Sbjct: 11  EDLPKVLLLKKPPSFQFFEGESFTSTKFQYLKAYESPLPLHQFLAAHAQSVQAVLASGGA 70

Query: 68  TLNSAILDCLPALKLVVTTSAGVDHLNLAELRGRGIAIAYARNLYSEDVADMAVGLLIDV 127
           ++N+ IL  LPA+++VVTTSAG++ +++ E R RGIAIA A ++YS DVAD+AVGLLIDV
Sbjct: 71  SINADILQLLPAVRVVVTTSAGLNQIDIPECRRRGIAIANAGDVYSADVADLAVGLLIDV 130

Query: 128 LRKVSAGDR----------------------------------------------ISYNS 187
           LRK+SA DR                                              ISYNS
Sbjct: 131 LRKISASDRYVRQGLWATKGDYPLGAKLSGKRAGIVGLGRIGYEVAKRLEAFGCYISYNS 190

Query: 188 RAKKPLVSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVIINIGRGA 247
           R KKP VSY +Y NV ELA NC+ LIICCGLT++T HMIN+EV+ ALGK GVI+NIGRGA
Sbjct: 191 RKKKPNVSYPFYQNVSELAANCDALIICCGLTKQTFHMINKEVLSALGKKGVIVNIGRGA 250

Query: 248 VIDEKEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAAITT 250
           +IDEKEM++CLV GE  GAGLDVFE EP++PK+ FT++NVVLS H A+ T
Sbjct: 251 IIDEKEMVRCLVAGEIAGAGLDVFENEPDVPKEFFTMENVVLSPHTAVFT 300

[Close]
BLAST of Lsi05G019870 vs. TrEMBL
Match: B9GPS8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15240g PE=3 SV=2)

HSP 1 Score: 259.6 bits (662), Expect = 3.9e-66
Identity = 144/294 (48.98%), Postives = 189/294 (64.29%), Query Frame = 1 

Query: 4   ERQGKELPQVLVLGLPWIFSTL--ESQFPNKFHFLKPWHSQLPLHKFLNSYAQSTQALIM 63
           E + ++LP+V++   P  FS +  ES   NKF FLK + SQLPL +FL++++ S +A++ 
Sbjct: 13  EEEQQDLPKVVLFRPPPAFSLIGEESFASNKFQFLKTYDSQLPLDQFLSTHSHSIKAILS 72

Query: 64  PVINTLNSAILDCLPALKLVVTTSAGVDHLNLAELRGRGIAIAYARNLYSEDVADMAVGL 123
                +N+ IL  LP + +VVTTSAG++ +++ E R RGI IA A  +YS DVADMAVGL
Sbjct: 73  SGGAPVNADILQLLPEVGVVVTTSAGLNQIDIPECRRRGIKIANAGYVYSADVADMAVGL 132

Query: 124 LIDVLRKVSAGDR----------------------------------------------I 183
           LIDVLRKVSA DR                                              +
Sbjct: 133 LIDVLRKVSASDRYVRQGLWAAKGNYPLGSKLSGKRAGIVGLGNIGYEVAKRLEAFGCFV 192

Query: 184 SYNSRAKKPLVSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVIINI 243
           SYNSR KKP VSY +Y +V ELA NC+ LIICCGL++ET HMIN++V+ ALGK GVI+NI
Sbjct: 193 SYNSRKKKPNVSYPFYHDVCELAANCDALIICCGLSDETRHMINKQVLSALGKEGVIVNI 252

Query: 244 GRGAVIDEKEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAAITT 250
           GRGA+IDEKEM++CL++GE  GAGLDVFE EP +PK+ F +DNVVLS H A+ T
Sbjct: 253 GRGAIIDEKEMVRCLMQGEIAGAGLDVFETEPSVPKEFFAMDNVVLSPHRAVFT 306

[Close]
BLAST of Lsi05G019870 vs. TrEMBL
Match: B9RDH0_RICCO (Glycerate dehydrogenase, putative OS=Ricinus communis GN=RCOM_1612790 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 3.3e-65
Identity = 142/286 (49.65%), Postives = 181/286 (63.29%), Query Frame = 1 

Query: 10  LPQVLVLGLPWIFSTLESQFPNKFHFLKPWHSQLPLHKFLNSYAQSTQALIMPVINTLNS 69
           LP+VLVL    +F   E +   KFHFLK W SQLPLH+FL ++A S Q L+    + + +
Sbjct: 15  LPEVLVLERSPVFKFHEHRLSQKFHFLKAWESQLPLHQFLAAHAYSVQVLLSSGRDPVTA 74

Query: 70  AILDCLPALKLVVTTSAGVDHLNLAELRGRGIAIAYARNLYSEDVADMAVGLLIDVLRKV 129
             +  LP+L+L+VTTSAG++H++L E R +GIAIA A +LYSEDVAD+ VGL IDVLRK+
Sbjct: 75  NNIRLLPSLRLIVTTSAGLNHIDLQECRRQGIAIATAGSLYSEDVADLTVGLFIDVLRKI 134

Query: 130 SAGDR--------------ISYNSRA--------------------------------KK 189
           SA D+              + +  R                                 KK
Sbjct: 135 SASDQYVRQGSWPTKGDFPLGFKLRGRQVGIVGLGSIGLEVAKRVEAFGCKIMYNSRNKK 194

Query: 190 PLVSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVIINIGRGAVIDE 249
           P V Y YYSNV ELA NC+VLIICCGLT++T HMIN+EV  ALGK GVI+N+GRG +IDE
Sbjct: 195 PSVPYPYYSNVCELAANCDVLIICCGLTDQTRHMINKEVFEALGKEGVIVNVGRGVIIDE 254

[Close]
BLAST of Lsi05G019870 vs. TAIR10
Match: AT1G12550.1 (AT1G12550.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein)

HSP 1 Score: 161.0 bits (406), Expect = 9.5e-40
Identity = 76/123 (61.79%), Postives = 97/123 (78.86%), Query Frame = 1 

Query: 127 RKVSAGDRISYNSRAKKPLVSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLAL 186
           R  S G  ISYNSR++K    Y YYS++  LA N +VL++CC LT+ETHH++NREVM  L
Sbjct: 170 RLESFGCVISYNSRSQKQSSPYRYYSDILSLAENNDVLVLCCSLTDETHHIVNREVMELL 229

Query: 187 GKNGVIINIGRGAVIDEKEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAA 246
           GK+GV+IN+GRG +IDEKEM++CLV+G  GGAGLDVFE EP +P++LF LDNVVLS H A
Sbjct: 230 GKDGVVINVGRGKLIDEKEMVKCLVDGVIGGAGLDVFENEPAVPQELFGLDNVVLSPHFA 289

Query: 247 ITT 250
           + T
Sbjct: 290 VAT 292

[Close]
BLAST of Lsi05G019870 vs. TAIR10
Match: AT2G45630.2 (AT2G45630.2 D-isomer specific 2-hydroxyacid dehydrogenase family protein)

HSP 1 Score: 150.2 bits (378), Expect = 1.7e-36
Identity = 71/119 (59.66%), Postives = 92/119 (77.31%), Query Frame = 1 

Query: 132 GDRISYNSRAKKPL-VSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNG 191
           G +ISY+SR +KP  V Y YY ++ E+A N + LIICC L E+T  +IN++V+ ALGK G
Sbjct: 191 GCQISYSSRNRKPYDVPYHYYMDIEEMAANSDALIICCELNEKTLRLINKDVLSALGKRG 250

Query: 192 VIINIGRGAVIDEKEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAAITT 250
           VI+N+ RGA+IDE+EM++CL EGE GGAGLDVFE EP +PK+LF LDNVV S H+A  T
Sbjct: 251 VIVNVARGAIIDEEEMVRCLREGEIGGAGLDVFEDEPNVPKELFELDNVVFSPHSAFMT 309

[Close]
BLAST of Lsi05G019870 vs. TAIR10
Match: AT1G79870.1 (AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein)

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-30
Identity = 62/115 (53.91%), Postives = 83/115 (72.17%), Query Frame = 1 

Query: 135 ISYNSRAKKPLVSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVIIN 194
           I+Y SR  KP V+Y YY  V +LA N ++L++ C LTE+T H+++R+VM ALG  GV+IN
Sbjct: 170 INYYSRTIKPDVAYKYYPTVVDLAQNSDILVVACPLTEQTRHIVDRQVMDALGAKGVLIN 229

Query: 195 IGRGAVIDEKEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAAITT 250
           IGRG  +DE+E+I+ L EG  GGA LDVFE EP +P++LF L+NVVL  H    T
Sbjct: 230 IGRGPHVDEQELIKALTEGRLGGAALDVFEQEPHVPEELFGLENVVLLPHVGSGT 284

[Close]
BLAST of Lsi05G019870 vs. TAIR10
Match: AT1G72190.1 (AT1G72190.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein)

HSP 1 Score: 62.8 bits (151), Expect = 3.5e-10
Identity = 29/100 (29.00%), Postives = 55/100 (55.00%), Query Frame = 1 

Query: 151 YSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVIINIGRGAVIDEKEMIQCL 210
           + ++   A   +++++C  L +ET  ++N+E + ++ K  +++NI RG +I+ +   Q L
Sbjct: 243 HEDIYTFAGKADIVVVCLRLNKETAEIVNKEFICSMKKGALLVNIARGGLINYESAFQNL 302

Query: 211 VEGETGGAGLDVFEFEPEIPKQ-LFTLDNVVLSRHAAITT 250
             G  GG G+DV   EP  P   +    NV+++ H A  T
Sbjct: 303 ESGHLGGLGIDVAWSEPFDPNDPILKFKNVIITPHVAGVT 342

[Close]
BLAST of Lsi05G019870 vs. TAIR10
Match: AT1G68010.2 (AT1G68010.2 hydroxypyruvate reductase)

HSP 1 Score: 55.5 bits (132), Expect = 5.6e-08
Identity = 30/102 (29.41%), Postives = 55/102 (53.92%), Query Frame = 1 

Query: 146 VSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLALGK-NGVIINIGRGAVIDEK 205
           V++   S++ E+    +++ +   L + T+H++N+E +  + K   +++N  RG VIDE 
Sbjct: 222 VTWKRASSMEEVLREADLISLHPVLDKTTYHLVNKERLAMMKKVEAILVNCSRGPVIDEA 281

Query: 206 EMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAA 247
            +++ L E      GLDVFE EP +   L    N ++  H A
Sbjct: 282 ALVEHLKENPMFRVGLDVFEEEPFMKPGLADTKNAIVVPHIA 323

[Close]
BLAST of Lsi05G019870 vs. NCBI nr
Match: gi|449433109|ref|XP_004134340.1| (PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3 [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 2.2e-78
Identity = 173/296 (58.45%), Postives = 195/296 (65.88%), Query Frame = 1 

Query: 1   MAMERQGKELPQVLVLGLPWIFSTLESQFPNKFHFLKPWHSQLPLHKFLNSYAQSTQALI 60
           MAME + KELP+VLVLG PW+FSTLESQFPNKFH+LKPW SQLPLH+FL SYAQSTQAL+
Sbjct: 1   MAMEGESKELPEVLVLGPPWVFSTLESQFPNKFHYLKPWLSQLPLHQFLTSYAQSTQALL 60

Query: 61  MPVINTLNSAI-------------------------------------------LDCLPA 120
           +PV   LNS I                                            D    
Sbjct: 61  IPVSPPLNSPILDCLPSLKLVVTVSAGVEHLNFAELRGRGIAVAYAGNVFSEDVADMAVG 120

Query: 121 LKLVVT--TSAGVDHLNLAELRGRGIAIAYARNLYSEDVADMAVGLL-IDVLRKVSA-GD 180
           L + V    SAG D      L+           L  + +  + +G +  +V +++   G 
Sbjct: 121 LLIDVLRKVSAG-DRFVKQRLQPIKPDFPLRSKLSGKQIGIVGLGKIGSEVAKRLEGFGC 180

Query: 181 RISYNSRAKKPLVSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVII 240
           RISYNSR KKPLVSYSYYSNV ELATNCEVLIICCGLTEETHHMINREVML LGK+GVII
Sbjct: 181 RISYNSRTKKPLVSYSYYSNVHELATNCEVLIICCGLTEETHHMINREVMLELGKDGVII 240

Query: 241 NIGRGAVIDEKEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAAITT 250
           NIGRGAVIDEKEMI+CL+EGE GGAGLDVFEFEPEIPKQLFTLDNVVLS H A+TT
Sbjct: 241 NIGRGAVIDEKEMIRCLIEGEIGGAGLDVFEFEPEIPKQLFTLDNVVLSPHTAVTT 295

[Close]
BLAST of Lsi05G019870 vs. NCBI nr
Match: gi|645253979|ref|XP_008232825.1| (PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Prunus mume])

HSP 1 Score: 285.0 bits (728), Expect = 1.2e-73
Identity = 154/296 (52.03%), Postives = 196/296 (66.22%), Query Frame = 1 

Query: 1   MAMERQGKELPQVLVLGLPWIFSTLESQFPNKFHFLKPWHSQLPLHKFLNSYAQSTQALI 60
           MA+     ELPQVLVL  P  F+ LES + +KF+FLK W S LP  +FL ++A S QAL+
Sbjct: 1   MALNGNHSELPQVLVLLPPGCFTFLESNYSHKFNFLKAWDSPLPQDQFLATHAGSVQALL 60

Query: 61  MPVIN-TLNSAILDCLPALKLVVTTSAGVDHLNLAELRGRGIAIAYARNLYSEDVADMAV 120
                 T+ + IL  LP+LK++VTTSAG+DH++LAE R RG+AIA    +++EDVADMAV
Sbjct: 61  SSANGPTITANILQMLPSLKVIVTTSAGLDHVDLAECRSRGVAIASTPKIFTEDVADMAV 120

Query: 121 GLLIDVLRKVSAGDRI-------------------------------------------- 180
           GLL+DV+RK+SAGDR                                             
Sbjct: 121 GLLLDVMRKISAGDRYVRDGLWATRGDYALGSKIGGKRVGIVGLGNIGLEVAKRLEAFGC 180

Query: 181 --SYNSRAKKPLVSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVII 240
              YNSR +KP VSY +YS++ ELA N + L+ICC LT ETHHMIN++V+LALG++GVI+
Sbjct: 181 NILYNSRTEKPFVSYPFYSDISELAANSDALVICCALTAETHHMINKKVLLALGRDGVIV 240

Query: 241 NIGRGAVIDEKEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAAITT 250
           NIGRGAVIDEKEM++CLV+GE GGAGLDVFE EPE+P++LF LDNVVLS H A  T
Sbjct: 241 NIGRGAVIDEKEMVRCLVKGEIGGAGLDVFEDEPEVPQELFALDNVVLSPHYATYT 296

[Close]
BLAST of Lsi05G019870 vs. NCBI nr
Match: gi|596053170|ref|XP_007220744.1| (hypothetical protein PRUPE_ppa025117mg [Prunus persica])

HSP 1 Score: 281.2 bits (718), Expect = 1.8e-72
Identity = 152/296 (51.35%), Postives = 193/296 (65.20%), Query Frame = 1 

Query: 1   MAMERQGKELPQVLVLGLPWIFSTLESQFPNKFHFLKPWHSQLPLHKFLNSYAQSTQALI 60
           MA+     ELPQVLVL  P  F+ LES + +KF FLK W S LP  +FL ++A S QAL+
Sbjct: 1   MALNGNHSELPQVLVLLPPGCFTLLESNYSHKFKFLKAWDSPLPQDQFLATHAGSVQALL 60

Query: 61  MPVIN-TLNSAILDCLPALKLVVTTSAGVDHLNLAELRGRGIAIAYARNLYSEDVADMAV 120
                 T+ + IL  LP+LK++VTTS G+DHL+LAE R RG+AIA    +++EDVADMAV
Sbjct: 61  SSANGPTITANILQMLPSLKVIVTTSVGIDHLDLAECRSRGVAIASTPKIFTEDVADMAV 120

Query: 121 GLLIDVLRKVSAGDRI-------------------------------------------- 180
           GLL+DV+RK+SAGDR                                             
Sbjct: 121 GLLLDVMRKISAGDRYVRDGLWATRGDYALGSKIGGKRVGIVGLGNIGLEVAKRLEAFGC 180

Query: 181 --SYNSRAKKPLVSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVII 240
              YNSR +KP VSY +YS++ ELA N + L+ICC LT ETHH+IN++V+LALG++GVI+
Sbjct: 181 NILYNSRTEKPFVSYPFYSDICELAANSDALVICCALTAETHHLINKKVLLALGRDGVIV 240

Query: 241 NIGRGAVIDEKEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAAITT 250
           NIGRGA+IDEKEM++CLV GE GGAGLDVFE EPE+P++LF LDNVVLS H A  T
Sbjct: 241 NIGRGAIIDEKEMVRCLVIGEIGGAGLDVFEDEPEVPEELFALDNVVLSPHYATYT 296

[Close]
BLAST of Lsi05G019870 vs. NCBI nr
Match: gi|1009162194|ref|XP_015899306.1| (PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 273.1 bits (697), Expect = 4.8e-70
Identity = 146/292 (50.00%), Postives = 194/292 (66.44%), Query Frame = 1 

Query: 5   RQGKELPQVLVLGLPWIFSTLESQFPNKFHFLKPWHSQLPLHKFLNSYAQSTQALIMPVI 64
           +Q + LP+++VL  P  F  LES++ +KFHFLK W SQL + +FL++ A S QA++    
Sbjct: 14  QQLQNLPKIIVLLPPGGFKFLESEYSHKFHFLKAWESQLSMDQFLSTRASSVQAMLSSAN 73

Query: 65  NTLNSA-ILDCLPALKLVVTTSAGVDHLNLAELRGRGIAIAYARNLYSEDVADMAVGLLI 124
             L +A IL  LP+L+++VTTSAG+DH++L E R RGIA+A A N++SEDVADMAVGLLI
Sbjct: 74  GPLITAQILQMLPSLRVIVTTSAGLDHVDLLECRRRGIAVANAGNVFSEDVADMAVGLLI 133

Query: 125 DVLRKVSAGDRI----------SYNSRAK------------------------------- 184
           DVLRK+SA DR            Y+  +K                               
Sbjct: 134 DVLRKMSAADRYVRCGIWARNGDYHLGSKLRGKRVGIVGLGSIGLEVAKRLEAFGCSILY 193

Query: 185 -----KPLVSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVIINIGR 244
                KP VSY +YSN+ ELA N +VL+ICC L E+THH++NREVMLALGK GVI+N+ R
Sbjct: 194 NSRKEKPNVSYPFYSNIHELAANSDVLVICCALNEQTHHIVNREVMLALGKEGVIVNVAR 253

Query: 245 GAVIDEKEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAAITT 250
           GA++DEKEM++CL+ GE GGAGLDV+E EP +PK+L T+DNVVLS H A++T
Sbjct: 254 GAIVDEKEMVKCLLHGEIGGAGLDVYEHEPHVPKELLTMDNVVLSPHGAVST 305

[Close]
BLAST of Lsi05G019870 vs. NCBI nr
Match: gi|802698666|ref|XP_012083528.1| (PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Jatropha curcas])

HSP 1 Score: 270.8 bits (691), Expect = 2.4e-69
Identity = 148/290 (51.03%), Postives = 191/290 (65.86%), Query Frame = 1 

Query: 8   KELPQVLVLGLPWIFSTLESQF--PNKFHFLKPWHSQLPLHKFLNSYAQSTQALIMPVIN 67
           ++LP+VL+L  P  F   E +     KF +LK + S LPLH+FL ++AQS QA++     
Sbjct: 11  EDLPKVLLLKKPPSFQFFEGESFTSTKFQYLKAYESPLPLHQFLAAHAQSVQAVLASGGA 70

Query: 68  TLNSAILDCLPALKLVVTTSAGVDHLNLAELRGRGIAIAYARNLYSEDVADMAVGLLIDV 127
           ++N+ IL  LPA+++VVTTSAG++ +++ E R RGIAIA A ++YS DVAD+AVGLLIDV
Sbjct: 71  SINADILQLLPAVRVVVTTSAGLNQIDIPECRRRGIAIANAGDVYSADVADLAVGLLIDV 130

Query: 128 LRKVSAGDR----------------------------------------------ISYNS 187
           LRK+SA DR                                              ISYNS
Sbjct: 131 LRKISASDRYVRQGLWATKGDYPLGAKLSGKRAGIVGLGRIGYEVAKRLEAFGCYISYNS 190

Query: 188 RAKKPLVSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVIINIGRGA 247
           R KKP VSY +Y NV ELA NC+ LIICCGLT++T HMIN+EV+ ALGK GVI+NIGRGA
Sbjct: 191 RKKKPNVSYPFYQNVSELAANCDALIICCGLTKQTFHMINKEVLSALGKKGVIVNIGRGA 250

Query: 248 VIDEKEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAAITT 250
           +IDEKEM++CLV GE  GAGLDVFE EP++PK+ FT++NVVLS H A+ T
Sbjct: 251 IIDEKEMVRCLVAGEIAGAGLDVFENEPDVPKEFFTMENVVLSPHTAVFT 300

The following BLAST results are available for this feature:
BLAST of Lsi05G019870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HPR3_ARATH1.7e-3861.79Glyoxylate/hydroxypyruvate reductase HPR3 OS=Arabidopsis thaliana GN=HPR3 PE=2 S... [more]
HPPR_PLESU2.3e-3259.13Hydroxyphenylpyruvate reductase OS=Plectranthus scutellarioides GN=HPPR PE=1 SV=... [more]
HPR2_ARATH2.4e-2953.91Glyoxylate/hydroxypyruvate reductase A HPR2 OS=Arabidopsis thaliana GN=HPR2 PE=1... [more]
2KGR_GLUOX1.2e-2332.302-ketogluconate reductase OS=Gluconobacter oxydans (strain 621H) GN=GOX0417 PE=1... [more]
GYAR_THEON8.7e-1934.76Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1[more]
BLAST of Lsi05G019870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L908_CUCSA1.5e-7858.45Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124900 PE=3 SV=1[more]
M5XK89_PRUPE1.2e-7251.35Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025117mg PE=3 SV=1[more]
E6NU31_JATCU1.7e-6951.03JHL05D22.12 protein OS=Jatropha curcas GN=JHL05D22.12 PE=3 SV=1[more]
B9GPS8_POPTR3.9e-6648.98Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15240g PE=3 SV=2[more]
B9RDH0_RICCO3.3e-6549.65Glycerate dehydrogenase, putative OS=Ricinus communis GN=RCOM_1612790 PE=3 SV=1[more]
BLAST of Lsi05G019870 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G12550.19.5e-4061.79 D-isomer specific 2-hydroxyacid dehydrogenase family protein[more]
AT2G45630.21.7e-3659.66 D-isomer specific 2-hydroxyacid dehydrogenase family protein[more]
AT1G79870.11.4e-3053.91 D-isomer specific 2-hydroxyacid dehydrogenase family protein[more]
AT1G72190.13.5e-1029.00 D-isomer specific 2-hydroxyacid dehydrogenase family protein[more]
AT1G68010.25.6e-0829.41 hydroxypyruvate reductase[more]
BLAST of Lsi05G019870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449433109|ref|XP_004134340.1|2.2e-7858.45PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3 [Cucumis sativus][more]
gi|645253979|ref|XP_008232825.1|1.2e-7352.03PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Prunus mume][more]
gi|596053170|ref|XP_007220744.1|1.8e-7251.35hypothetical protein PRUPE_ppa025117mg [Prunus persica][more]
gi|1009162194|ref|XP_015899306.1|4.8e-7050.00PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like isoform X1 [Ziziphus j... [more]
gi|802698666|ref|XP_012083528.1|2.4e-6951.03PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0051287NAD binding
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR006140D-isomer_DH_NAD-bd
IPR006139D-isomer_2_OHA_DH_cat_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0051287 NAD binding
molecular_function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G019870.1Lsi05G019870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006139D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domainPFAMPF003892-Hacid_dhcoord: 52..185
score: 1.9
IPR006140D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domainPFAMPF028262-Hacid_dh_Ccoord: 137..246
score: 1.9
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 11..134
score: 2.8E-18coord: 145..248
score: 1.7
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 112..246
score: 2.72
NoneNo IPR availablePANTHERPTHR109962-HYDROXYACID DEHYDROGENASE-RELATEDcoord: 1..249
score: 1.7E
NoneNo IPR availablePANTHERPTHR10996:SF155D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE-LIKE PROTEIN-RELATEDcoord: 1..249
score: 1.7E
NoneNo IPR availableunknownSSF52283Formate/glycerate dehydrogenase catalytic domain-likecoord: 24..136
score: 8.5

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G019870Wax gourdlsiwgoB435
Lsi05G019870Bottle gourd (USVL1VR-Ls)lsilsiB007
Lsi05G019870Cucumber (Gy14) v1cgylsiB415
Lsi05G019870Cucumber (Gy14) v1cgylsiB488
Lsi05G019870Cucumber (Gy14) v1cgylsiB585
Lsi05G019870Cucurbita maxima (Rimu)cmalsiB245
Lsi05G019870Cucurbita maxima (Rimu)cmalsiB286
Lsi05G019870Cucurbita maxima (Rimu)cmalsiB356
Lsi05G019870Cucurbita maxima (Rimu)cmalsiB764
Lsi05G019870Cucurbita moschata (Rifu)cmolsiB233
Lsi05G019870Cucurbita moschata (Rifu)cmolsiB275
Lsi05G019870Cucurbita moschata (Rifu)cmolsiB757
Lsi05G019870Cucurbita pepo (Zucchini)cpelsiB122
Lsi05G019870Cucurbita pepo (Zucchini)cpelsiB271
Lsi05G019870Cucurbita pepo (Zucchini)cpelsiB506
Lsi05G019870Cucurbita pepo (Zucchini)cpelsiB714
Lsi05G019870Wild cucumber (PI 183967)cpilsiB207
Lsi05G019870Wild cucumber (PI 183967)cpilsiB383
Lsi05G019870Wild cucumber (PI 183967)cpilsiB470
Lsi05G019870Cucumber (Chinese Long) v2culsiB209
Lsi05G019870Cucumber (Chinese Long) v2culsiB462
Lsi05G019870Melon (DHL92) v3.5.1lsimeB338
Lsi05G019870Melon (DHL92) v3.5.1lsimeB378
Lsi05G019870Watermelon (Charleston Gray)lsiwcgB335
Lsi05G019870Watermelon (Charleston Gray)lsiwcgB346
Lsi05G019870Watermelon (97103) v1lsiwmB365
Lsi05G019870Watermelon (97103) v1lsiwmB377
Lsi05G019870Watermelon (97103) v1lsiwmB385
Lsi05G019870Cucumber (Gy14) v2cgyblsiB196
Lsi05G019870Cucumber (Gy14) v2cgyblsiB344
Lsi05G019870Cucumber (Gy14) v2cgyblsiB430
Lsi05G019870Melon (DHL92) v3.6.1lsimedB354
Lsi05G019870Melon (DHL92) v3.6.1lsimedB396
Lsi05G019870Silver-seed gourdcarlsiB442
Lsi05G019870Silver-seed gourdcarlsiB565
Lsi05G019870Silver-seed gourdcarlsiB853
Lsi05G019870Cucumber (Chinese Long) v3cuclsiB228
Lsi05G019870Cucumber (Chinese Long) v3cuclsiB403
Lsi05G019870Cucumber (Chinese Long) v3cuclsiB491
Lsi05G019870Watermelon (97103) v2lsiwmbB320
Lsi05G019870Watermelon (97103) v2lsiwmbB333
Lsi05G019870Watermelon (97103) v2lsiwmbB345