Lsi05G019870 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAATGGAAAGGCAAGGCAAGGAGCTTCCTCAAGTTTTGGTTTTAGGCCTTCCCTGGATATTCTCAACTCTCGAATCCCAATTCCCAAACAAGTTCCATTTTCTAAAGCCATGGCATTCTCAACTACCCCTACACAAATTCCTCAATTCTTATGCCCAATCCACACAAGCCTTGATCATGCCTGTCATTAATACACTCAACTCCGCCATTCTCGACTGCCTCCCGGCGCTGAAGCTCGTCGTTACTACCAGCGCCGGTGTCGATCACTTGAACTTGGCTGAGTTACGGGGCCGTGGGATAGCCATTGCCTATGCAAGAAACTTGTACTCTGAAGATGTGGCCGATATGGCGGTTGGATTACTAATCGATGTTCTTAGAAAGGTCTCGGCAGGAGACCGGTTCGTGAAGCAACACCTTTGGCCTACTAAACCGGATTTTCCTCTCGGATTAAAGGTGCAATTCTTCTTTTTTTTCTTTATCTAATTGCAATTTGGGAGAGTCGTGTGACTGACCAAAAATTTGGGCCCGAAATGAAATATGCTCTACCATTTAAAACACAAGTTTTTTTTATCTACCAAAACCGATCATTTTGCATGTGGATTAAGATATAGCTCTCTCTCTTTTGAGTTTTAGGTTTTTTAGCTCGATCTCATTATTTTCTTTCACTCTTCTCGCTTCTCTCATTCTTTTGAGTTTTGAATTTTGTGCTCCTCACTCTCTCAATTTTCTCTTTCCTTCCTTTTGGTTTAGAACTTTATGCTCCTTGCCCTTTATTTTCTTTTTCTCTCACACTCGCCTCTCTCATCCCTTTGGATTGAATTATTTTCTCTACTCTTTCTATCTTGCTCTTGCCTTTTAATCCATAATAGCCCGACCTTACACCACAATAAGGTCGTTTTGGTAATTTTTACAAATGATGATGAAAGCAAAAAGTTTATTTAAAAAAACTTATTAATACATGGGGCATATTTTATTTTGAACCCAAAATTTGGTTTGACTGTACAATTATCTCTTGCAATTTCCTCTATTTATTAGCTTTTTTGTTGTTTACATTTTAAGAGTGTTTAAAATTTAAGTCAAATTTTGAAAGAAAATTTGTAACGAAAGATTTTGCAAATATAGCAAAATATATATAGTTTTGACAAATCATAGTTAGTTATCAATAATAAACTCCTACTACTAATAGACTACCCTTCTTAAAAGTCTATCAATGATAATTTCTAAAACTAAAATAGCTTATTAGAATAATATTTCTTCATTACTTTTGTTCAACTAGAATTCATGAGTGATAACAATCTATCAATGATAGTTACTAAAAGACTTCAACGCATATATAATTCTATCAACAATACAAGTCTATCAGTGAGACATTGATAACTCCAATACAATTCTAATAATAATATAAGTCTATGATTGAACTAAACTATCAATAATAAAAATTTCTCAGTGATAGATGTTGATAGAATTCAATACATATAGAATATCAACCATATAAACCTATCACTAATAGACTTCTAACTTGACAGTTTATCAAAAGTCTATCATTTATAAACTTCAATCATTCTTATGAGTGTTTTTTGAGGGCTAACCATCTTTTCAGACTTTGTACATGGTCATTTAGATTTTACTATTTTTACACATAGTTTTAGGTTCTATTATTTTTTTTCTATTAATTTAGTTGATTTAGCTATATAAGCAACTGACCCAATTTGAAAACCTAAAAAAAATAGTTTTAAAAAACTTACTTTTGATTTTAGAACTTGGCTTAAGATTCAAATTTTTAAATAGGAAAGATGAAAATTGTTATTAAATGGAGCAAATGAATGGCTAGTTAGTCAATTTGGATGCTCTTTTTTGTTTTTATTATTTTATTGATGAATTTGAAGGTTAAAGAATTTTCACAGTTGAGCGGCAAGCAAATTGGGATTGTTGGACTAGGGGAAAATAGGCTCTGAAGTTGCCAAAAGGCTGGAGGGTTTTGGTTGCAGAATCTCATATAACTCAAGAGCCAAAAAGCCATTAGTGTCATACTCCTACTATTCCAATGTACGTGAACTTGCAACCAACTGTGAAGTCCTCATCATTTGTTGTGGTTTAACTGAAGAAACCCACCATATGATTAACAGGGAAGTGATGCTAGCATTAGGAAAAAATGGAGTGATAATCAACATTGGTCGCGGAGCGGTCATCGACGAGAAGGAGATGATTCAATGTCTGGTTGAAGGGGAGACTGGGGGTGCTGGCCTGGATGTGTTTGAGTTCGAACCCGAAATTCCGAAACAGCTCTTTACACTTGATAATGTTGTGTTGTCACGACATGCTGCTATCACAACATGA ATGGCAATGGAAAGGCAAGGCAAGGAGCTTCCTCAAGTTTTGGTTTTAGGCCTTCCCTGGATATTCTCAACTCTCGAATCCCAATTCCCAAACAAGTTCCATTTTCTAAAGCCATGGCATTCTCAACTACCCCTACACAAATTCCTCAATTCTTATGCCCAATCCACACAAGCCTTGATCATGCCTGTCATTAATACACTCAACTCCGCCATTCTCGACTGCCTCCCGGCGCTGAAGCTCGTCGTTACTACCAGCGCCGGTGTCGATCACTTGAACTTGGCTGAGTTACGGGGCCGTGGGATAGCCATTGCCTATGCAAGAAACTTGTACTCTGAAGATGTGGCCGATATGGCGGTTGGATTACTAATCGATGTTCTTAGAAAGGTCTCGGCAGGAGACCGAATCTCATATAACTCAAGAGCCAAAAAGCCATTAGTGTCATACTCCTACTATTCCAATGTACGTGAACTTGCAACCAACTGTGAAGTCCTCATCATTTGTTGTGGTTTAACTGAAGAAACCCACCATATGATTAACAGGGAAGTGATGCTAGCATTAGGAAAAAATGGAGTGATAATCAACATTGGTCGCGGAGCGGTCATCGACGAGAAGGAGATGATTCAATGTCTGGTTGAAGGGGAGACTGGGGGTGCTGGCCTGGATGTGTTTGAGTTCGAACCCGAAATTCCGAAACAGCTCTTTACACTTGATAATGTTGTGTTGTCACGACATGCTGCTATCACAACATGA ATGGCAATGGAAAGGCAAGGCAAGGAGCTTCCTCAAGTTTTGGTTTTAGGCCTTCCCTGGATATTCTCAACTCTCGAATCCCAATTCCCAAACAAGTTCCATTTTCTAAAGCCATGGCATTCTCAACTACCCCTACACAAATTCCTCAATTCTTATGCCCAATCCACACAAGCCTTGATCATGCCTGTCATTAATACACTCAACTCCGCCATTCTCGACTGCCTCCCGGCGCTGAAGCTCGTCGTTACTACCAGCGCCGGTGTCGATCACTTGAACTTGGCTGAGTTACGGGGCCGTGGGATAGCCATTGCCTATGCAAGAAACTTGTACTCTGAAGATGTGGCCGATATGGCGGTTGGATTACTAATCGATGTTCTTAGAAAGGTCTCGGCAGGAGACCGAATCTCATATAACTCAAGAGCCAAAAAGCCATTAGTGTCATACTCCTACTATTCCAATGTACGTGAACTTGCAACCAACTGTGAAGTCCTCATCATTTGTTGTGGTTTAACTGAAGAAACCCACCATATGATTAACAGGGAAGTGATGCTAGCATTAGGAAAAAATGGAGTGATAATCAACATTGGTCGCGGAGCGGTCATCGACGAGAAGGAGATGATTCAATGTCTGGTTGAAGGGGAGACTGGGGGTGCTGGCCTGGATGTGTTTGAGTTCGAACCCGAAATTCCGAAACAGCTCTTTACACTTGATAATGTTGTGTTGTCACGACATGCTGCTATCACAACATGA MAMERQGKELPQVLVLGLPWIFSTLESQFPNKFHFLKPWHSQLPLHKFLNSYAQSTQALIMPVINTLNSAILDCLPALKLVVTTSAGVDHLNLAELRGRGIAIAYARNLYSEDVADMAVGLLIDVLRKVSAGDRISYNSRAKKPLVSYSYYSNVRELATNCEVLIICCGLTEETHHMINREVMLALGKNGVIINIGRGAVIDEKEMIQCLVEGETGGAGLDVFEFEPEIPKQLFTLDNVVLSRHAAITT
BLAST of Lsi05G019870 vs. Swiss-Prot
Match: HPR3_ARATH (Glyoxylate/hydroxypyruvate reductase HPR3 OS=Arabidopsis thaliana GN=HPR3 PE=2 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.7e-38 Identity = 76/123 (61.79%), Postives = 97/123 (78.86%), Query Frame = 1
BLAST of Lsi05G019870 vs. Swiss-Prot
Match: HPPR_PLESU (Hydroxyphenylpyruvate reductase OS=Plectranthus scutellarioides GN=HPPR PE=1 SV=2) HSP 1 Score: 140.6 bits (353), Expect = 2.3e-32 Identity = 68/115 (59.13%), Postives = 87/115 (75.65%), Query Frame = 1
BLAST of Lsi05G019870 vs. Swiss-Prot
Match: HPR2_ARATH (Glyoxylate/hydroxypyruvate reductase A HPR2 OS=Arabidopsis thaliana GN=HPR2 PE=1 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 2.4e-29 Identity = 62/115 (53.91%), Postives = 83/115 (72.17%), Query Frame = 1
BLAST of Lsi05G019870 vs. Swiss-Prot
Match: 2KGR_GLUOX (2-ketogluconate reductase OS=Gluconobacter oxydans (strain 621H) GN=GOX0417 PE=1 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.2e-23 Identity = 73/226 (32.30%), Postives = 108/226 (47.79%), Query Frame = 1
BLAST of Lsi05G019870 vs. Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 8.7e-19 Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 1
BLAST of Lsi05G019870 vs. TrEMBL
Match: A0A0A0L908_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124900 PE=3 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 1.5e-78 Identity = 173/296 (58.45%), Postives = 195/296 (65.88%), Query Frame = 1
BLAST of Lsi05G019870 vs. TrEMBL
Match: M5XK89_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025117mg PE=3 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 1.2e-72 Identity = 152/296 (51.35%), Postives = 193/296 (65.20%), Query Frame = 1
BLAST of Lsi05G019870 vs. TrEMBL
Match: E6NU31_JATCU (JHL05D22.12 protein OS=Jatropha curcas GN=JHL05D22.12 PE=3 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 1.7e-69 Identity = 148/290 (51.03%), Postives = 191/290 (65.86%), Query Frame = 1
BLAST of Lsi05G019870 vs. TrEMBL
Match: B9GPS8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15240g PE=3 SV=2) HSP 1 Score: 259.6 bits (662), Expect = 3.9e-66 Identity = 144/294 (48.98%), Postives = 189/294 (64.29%), Query Frame = 1
BLAST of Lsi05G019870 vs. TrEMBL
Match: B9RDH0_RICCO (Glycerate dehydrogenase, putative OS=Ricinus communis GN=RCOM_1612790 PE=3 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 3.3e-65 Identity = 142/286 (49.65%), Postives = 181/286 (63.29%), Query Frame = 1
BLAST of Lsi05G019870 vs. TAIR10
Match: AT1G12550.1 (AT1G12550.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein) HSP 1 Score: 161.0 bits (406), Expect = 9.5e-40 Identity = 76/123 (61.79%), Postives = 97/123 (78.86%), Query Frame = 1
BLAST of Lsi05G019870 vs. TAIR10
Match: AT2G45630.2 (AT2G45630.2 D-isomer specific 2-hydroxyacid dehydrogenase family protein) HSP 1 Score: 150.2 bits (378), Expect = 1.7e-36 Identity = 71/119 (59.66%), Postives = 92/119 (77.31%), Query Frame = 1
BLAST of Lsi05G019870 vs. TAIR10
Match: AT1G79870.1 (AT1G79870.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein) HSP 1 Score: 130.6 bits (327), Expect = 1.4e-30 Identity = 62/115 (53.91%), Postives = 83/115 (72.17%), Query Frame = 1
BLAST of Lsi05G019870 vs. TAIR10
Match: AT1G72190.1 (AT1G72190.1 D-isomer specific 2-hydroxyacid dehydrogenase family protein) HSP 1 Score: 62.8 bits (151), Expect = 3.5e-10 Identity = 29/100 (29.00%), Postives = 55/100 (55.00%), Query Frame = 1
BLAST of Lsi05G019870 vs. TAIR10
Match: AT1G68010.2 (AT1G68010.2 hydroxypyruvate reductase) HSP 1 Score: 55.5 bits (132), Expect = 5.6e-08 Identity = 30/102 (29.41%), Postives = 55/102 (53.92%), Query Frame = 1
BLAST of Lsi05G019870 vs. NCBI nr
Match: gi|449433109|ref|XP_004134340.1| (PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3 [Cucumis sativus]) HSP 1 Score: 300.8 bits (769), Expect = 2.2e-78 Identity = 173/296 (58.45%), Postives = 195/296 (65.88%), Query Frame = 1
BLAST of Lsi05G019870 vs. NCBI nr
Match: gi|645253979|ref|XP_008232825.1| (PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Prunus mume]) HSP 1 Score: 285.0 bits (728), Expect = 1.2e-73 Identity = 154/296 (52.03%), Postives = 196/296 (66.22%), Query Frame = 1
BLAST of Lsi05G019870 vs. NCBI nr
Match: gi|596053170|ref|XP_007220744.1| (hypothetical protein PRUPE_ppa025117mg [Prunus persica]) HSP 1 Score: 281.2 bits (718), Expect = 1.8e-72 Identity = 152/296 (51.35%), Postives = 193/296 (65.20%), Query Frame = 1
BLAST of Lsi05G019870 vs. NCBI nr
Match: gi|1009162194|ref|XP_015899306.1| (PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like isoform X1 [Ziziphus jujuba]) HSP 1 Score: 273.1 bits (697), Expect = 4.8e-70 Identity = 146/292 (50.00%), Postives = 194/292 (66.44%), Query Frame = 1
BLAST of Lsi05G019870 vs. NCBI nr
Match: gi|802698666|ref|XP_012083528.1| (PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Jatropha curcas]) HSP 1 Score: 270.8 bits (691), Expect = 2.4e-69 Identity = 148/290 (51.03%), Postives = 191/290 (65.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |