Lsi05G019320 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G019320
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Nuclear matrix protein 1
Location	chr05 : 26488116 .. 26492590 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGCGTCGACGGTTCGGCCCGGTTCATCATGTTCTGAATCCTGATCCGAGAGAGGGCGTGGTCTCAGGAAAGAGAGGAGAATAAAACAGGGACTTTAATGCCCAGAATTCAAAAAGTACAGTGCTACTCGACCGAAGACGAAGATGGCAGCCAGGCAAATGGAAGAGATTCAAAGGAAGCTATCAATGCTCAATTACCCTAGAGCCAATGCTCCTGCTCAGTCCCTCCTCTTCGCTGGCATGGAACGCTATGCCCTTCTTGAGTGGCTCTTCTTCCGGTACCCACTTTTGATTGTTTTTCAATTGCGTACTTCAAACTATTCGAATTGTATTTCCGAGCCTTTGTTTTCGTTGTTCCTTGAATTTCAAGCTTAGTCATTCACCGGACAATTGGATGTTTAATGGCTTATTGCATTGCTTTCTTAAATTGTAGTCTGTTGGGTGATAAGTCGCCGTTCTCGCAACAAAATATCCAAGGAGATGCTATTGATCGCGATGAAGAAACTGGTCGCATTCAGTGTCAGTCTTCCCATTTCATTCTTCACGATTATATGATTAATTACACAGTGGCATCTGGGACGAACTCAATTTTTGTATCACTGGCTAAACAAACTACATGGATGTTTGTTTAACTCTTACGCTTAAGAGTGTTAGTTTTATAGATCGGGCTCCCTTATCACGAGTCTGCGATGAGCATGTAATTGGGCGTCAAGATGGTATAGGAATTATGAAGTAATTGAATCACTAAAAATGGATACCTATGCGTTATTCTACTTCCTGTAAGTAGGTTGGCCACGGCTTTAAAAATGACTAATATTTATTCAGCATGTTAAAATTCCTGTCTGTATCCTGCCATTAAGTTTTATTTTATCTCGCTGCATCACATGATGCATAATATATGTAACGTTTTAATTTATTGTTGCTTTTATTTTCATTCTAGTGCTCTCGTTTAAATTTTGGTACACATTTGGTTTCTATCACTAGATTGATCAGTGCGTTATAACCAGTGGCTGTATTTTGCAGATTTGGCAGAAATCGCAAAGTTTCTGGGCATTACAACCACTATTGATACTGAAGTTATCCAAGTTCGTTTCTGAATTCCTTCTACTTTTTGTAAGAGTAAAATTAATTGAAGCTATCCAACTTTATAGACTATAAATTCTGGATTAAACTCACTATCAAGTAACCTGTCACAATTATTCATGCCGATCTGTGTTGCCTTGTATTTCTTTCACAATGTAATGTGCAAGGAGGGTGTATATGCACTCCCGTGTTTGCAGCAACAGTTATATCATTGTGTTCTGCATGAGTTCTCAGATCGATAGTTGTGTCTAGTTTATATTTCATGCAATCAAACTTTATGTATCCACTTGATTACAGATTTATTTAACATCTTCACTCTGTGTGTGCCTTCTTGTTAACTCTATGCTTGTACTTTACAGGGACGAGGAAGCTATGAGGAGCGAACTGAAATGATTCGTCTTATTGTCGATCTTGTTGAGGCAAGCATCTATGCTGATAATCCAGATTGGAGGTTGCCTTTTGTTTAGCCTGTATTGGTAAATATTATTCAATCTTCTGATAAATGAGCAAGGATATTGGAAATCAGTCTTTTTGCATTATTGTTCCTGCAGTGTTGATGAGCAGGTTGCCAAAGACATACAACTCATTGACTCTATTGCAGAGAAACAGGCTCAAATATTCTCAGAAGAATGCAAATTGTTTCCTGCTGATGTTCAAATTCAGTCTATATATCCATTGTAATGATCCTTCTACATCAATCCATGTCTACTGATTTTTTCTTAGCATTGATAATTTTTCTTGGATTCCCACAAGCTAAGTGGAAACCTGCCTTTCTCTTCTTCTGATTGCTCAAAATACTCCAAACATAGTCAGTTTGAGCTATGTTATCCGGATCTGACATCCTCTGACCTCTGCCCATTTCTTCATTTTGGTTTTTCTCGTTAATACATTATATTATTTTTGTTATAAACAATATGTAAACATGCCTACTACTGCCACATCCACACACAGTTTTATTGATCCGCGTTAATCTGCCTTAGGGAATTTTATACTCCCCTTTTTGAGGGAGCCGCTGTCTGGATTATATTAAATATAGTTCTTGCAAATGCTGTTCTGCTAGTTTAAGCTCTTACTGATTAAAACATTTTAGCTTAAACTCTAAATTGCTTTATATATATAGATATAGATATAGATATATATACACCACCGTAATTTTGATGTTGAATCTCAGAGGTCAATCTTTTAATCATTCGATTTTAAAATTAAATTATAGCATTCTATTGCCTAATCATTTTTTCCCCTTTTTTTTTCAGGCCAGATGTTTCTGAGCTGGAAACTAAGCTTGCAGAACAGTCCAAGATACTTTTGAATCTTCAACAGAAAGTCGATGATTTAGCATCAAAGGTTTCTGCTACTTTCTCTCAATTTTCTCACCTTAAGGAAAATTTGACCCTGCTCTCCTGCTGGGATATGTTCCAGATTCATCACCCTAACTTTCAACATGTTTTAATAAAAACAACTTAAGCAATATATGGCCATTTATGTCATGGGTCATCAATTTGAACAAAATATAGTTGGTCAAGGTGGCCTTTTTACTAGTCTTTTAGTTTCTCAGGTGATAATGAGATTTATGAGTTATTGCTTCTTTCCCCCCAACTTTTCTTATGTCCTTTTGCTTCTCTGACCTTTTCCAATCTGCAGTACGATTGATTAGTTATTGCAGACTAAAAATGATCAGGTTTTAACATTGTTTTGGATTTGAGGTGGCAGTTTTGTAGTGTTGAATCTAGATTTATTTTTACTGTTGCTTCTTTTGATGTCTTGCGATTTTATTCTATTCTTTTTTGTAGCATGCTTACAACCCAGATGAGGAGTATACGGAGGTAGAATCTCAACTGCGGGCACACTTGGAATCTTTTCTTGAAACAGCAAGATCTTTTAACATTATTTACACGAAGGTTTGTCTCAACTGTGATTGAGGGCTCTCTGTTTCATGTTTTGTTAACTGTCATAAAGAGGCTGGTGATGGGTTCACCCTTTCTTGAAAACCAACTATTATGCTGTCGAATCTACGTTTTTAAAAGCTGAACGTGGTCCTGTTTAAACTAATATATGGTAGCCTAAGTGGATGTTTTTCTGTATATAAAACACTTGAAAGGATGAGTTGGAACATAAATATATTCATTTTTGCTATTGACTTTAATTACCATTTTTATGGTAGGAAATCCGTCCTTGGACACACATGATGGAGGTTCCACAGCTTCATGGCTTTGGTCCAGCTGCAAACCGATTGTTGGAAGCATACAATATGCTATTGAAGGTATCCTTTTGCTAATTATTTCGTTTTTCATGATGCTGATTTTATTTATGTTCTTTGCTGCAAACCCATTTGACATACTTGTTTCTAATAATCGAGAAACTGTTTCATCGATTATATGAAGTACAAAAAAGGATATGAAGGTGAACCCAAACTGGGCTAGTAACTAGTAAGGAAAAAGCTTTCTGATAGCACAAAGATAAAATCAGTTAAAAGTACAAAAGAACTTGGATAATTTGCATCAGGCAAAGCCACGAAGACGATATGATCCTGCGAAAAAGGCAAAATATTTATCGTCCCCCATAAAAGTTCTGTTGCTTCTTTCTACCAAAGAAAAGGCCTTGTTTCATTTTTGGTTGGCGTATCTTCAAACGTTGTTCATGTTGAAATAAGTACTGGTTTCCTGTTACATCATCGTCTTGAAATTCATTTATTCATTTCATAATCTTGTTGGAGCTATAAGTTGTAAAGTGGTATGGTGTTGTTATGGCAGTTCTTGGGCAACTTGAGGAATCTTAGAGATTCTCATGCGGCTCTGGCGATTGGATCATCTGAAACGATTGCTGGAGAGCCATCTTCAGTAACAAGAATAATATCAGAGTGTGAGTCTGCATTGACATTCCTAAATCGCGATCTTGGCATTCTCTCGGCTTCCATTGCCCGCGAACGTGGTCAGCAGGGCGAAGAGGTTACTTTATGATGAAAGAATGTGAAACAGATCTTCTTGCATTTGCAATTCGGATCAGTGTGCAGTCATGACAACCGATTTCTGATAACTTAAACCAAGAGTGTAGTTATACAGAAACAATTTGCGGTATGTGATTTAGCATAGTTGTATAATCGTGTGATCAGTGTTGTATTATGCCTATAAACTAACTGTTATTCCGTTTGTCCATAGTGAAAATTTCCATCACATTGACATCCTTTGTATCTCTACTGAGTGTTTGTAATTTGTTTGAAGGGCACATTTAACTAGAATTTCTATTCCTTCCATAGTAAGATTGTAGTATGTCAACTTTGTCTCTTTCATAGAGTTCCCTGATATACTCTAAGCATTTTTGGAGCATTGTCAATCTGAACATTCGCTCGATCGTGTTAACTTGCAGATCCTCTAAAACTAGAGTTGTAATATTAG

mRNA sequence

AATGCGTCGACGGTTCGGCCCGGTTCATCATGTTCTGAATCCTGATCCGAGAGAGGGCGTGGTCTCAGGAAAGAGAGGAGAATAAAACAGGGACTTTAATGCCCAGAATTCAAAAAGTACAGTGCTACTCGACCGAAGACGAAGATGGCAGCCAGGCAAATGGAAGAGATTCAAAGGAAGCTATCAATGCTCAATTACCCTAGAGCCAATGCTCCTGCTCAGTCCCTCCTCTTCGCTGGCATGGAACGCTATGCCCTTCTTGAGTGGCTCTTCTTCCGTCTGTTGGGTGATAAGTCGCCGTTCTCGCAACAAAATATCCAAGGAGATGCTATTGATCGCGATGAAGAAACTGGTCGCATTCAGTATTTGGCAGAAATCGCAAAGTTTCTGGGCATTACAACCACTATTGATACTGAAGTTATCCAAGGACGAGGAAGCTATGAGGAGCGAACTGAAATGATTCGTCTTATTGTCGATCTTGTTGAGGCAAGCATCTATGCTGATAATCCAGATTGGAGTGTTGATGAGCAGGTTGCCAAAGACATACAACTCATTGACTCTATTGCAGAGAAACAGGCTCAAATATTCTCAGAAGAATGCAAATTGTTTCCTGCTGATGTTCAAATTCAGTCTATATATCCATTGCCAGATGTTTCTGAGCTGGAAACTAAGCTTGCAGAACAGTCCAAGATACTTTTGAATCTTCAACAGAAAGTCGATGATTTAGCATCAAAGCATGCTTACAACCCAGATGAGGAGTATACGGAGGTAGAATCTCAACTGCGGGCACACTTGGAATCTTTTCTTGAAACAGCAAGATCTTTTAACATTATTTACACGAAGGAAATCCGTCCTTGGACACACATGATGGAGGTTCCACAGCTTCATGGCTTTGGTCCAGCTGCAAACCGATTGTTGGAAGCATACAATATGCTATTGAAGTTCTTGGGCAACTTGAGGAATCTTAGAGATTCTCATGCGGCTCTGGCGATTGGATCATCTGAAACGATTGCTGGAGAGCCATCTTCAGTAACAAGAATAATATCAGAGTGTGAGTCTGCATTGACATTCCTAAATCGCGATCTTGGCATTCTCTCGGCTTCCATTGCCCGCGAACGTGGTCAGCAGGGCGAAGAGGTTACTTTATGATGAAAGAATGTGAAACAGATCTTCTTGCATTTGCAATTCGGATCAGTGTGCAGTCATGACAACCGATTTCTGATAACTTAAACCAAGAGTGTAGTTATACAGAAACAATTTGCGGTATGTGATTTAGCATAGTTGTATAATCGTGTGATCAGTGTTGTATTATGCCTATAAACTAACTGTTATTCCGTTTGTCCATAGTGAAAATTTCCATCACATTGACATCCTTTGTATCTCTACTGAGTGTTTGTAATTTGTTTGAAGGGCACATTTAACTAGAATTTCTATTCCTTCCATAGTAAGATTGTAGTATGTCAACTTTGTCTCTTTCATAGAGTTCCCTGATATACTCTAAGCATTTTTGGAGCATTGTCAATCTGAACATTCGCTCGATCGTGTTAACTTGCAGATCCTCTAAAACTAGAGTTGTAATATTAG

Coding sequence (CDS)

ATGGCAGCCAGGCAAATGGAAGAGATTCAAAGGAAGCTATCAATGCTCAATTACCCTAGAGCCAATGCTCCTGCTCAGTCCCTCCTCTTCGCTGGCATGGAACGCTATGCCCTTCTTGAGTGGCTCTTCTTCCGTCTGTTGGGTGATAAGTCGCCGTTCTCGCAACAAAATATCCAAGGAGATGCTATTGATCGCGATGAAGAAACTGGTCGCATTCAGTATTTGGCAGAAATCGCAAAGTTTCTGGGCATTACAACCACTATTGATACTGAAGTTATCCAAGGACGAGGAAGCTATGAGGAGCGAACTGAAATGATTCGTCTTATTGTCGATCTTGTTGAGGCAAGCATCTATGCTGATAATCCAGATTGGAGTGTTGATGAGCAGGTTGCCAAAGACATACAACTCATTGACTCTATTGCAGAGAAACAGGCTCAAATATTCTCAGAAGAATGCAAATTGTTTCCTGCTGATGTTCAAATTCAGTCTATATATCCATTGCCAGATGTTTCTGAGCTGGAAACTAAGCTTGCAGAACAGTCCAAGATACTTTTGAATCTTCAACAGAAAGTCGATGATTTAGCATCAAAGCATGCTTACAACCCAGATGAGGAGTATACGGAGGTAGAATCTCAACTGCGGGCACACTTGGAATCTTTTCTTGAAACAGCAAGATCTTTTAACATTATTTACACGAAGGAAATCCGTCCTTGGACACACATGATGGAGGTTCCACAGCTTCATGGCTTTGGTCCAGCTGCAAACCGATTGTTGGAAGCATACAATATGCTATTGAAGTTCTTGGGCAACTTGAGGAATCTTAGAGATTCTCATGCGGCTCTGGCGATTGGATCATCTGAAACGATTGCTGGAGAGCCATCTTCAGTAACAAGAATAATATCAGAGTGTGAGTCTGCATTGACATTCCTAAATCGCGATCTTGGCATTCTCTCGGCTTCCATTGCCCGCGAACGTGGTCAGCAGGGCGAAGAGGTTACTTTATGA

Protein sequence

MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQGDAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYADNPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQSKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTHMMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRIISECESALTFLNRDLGILSASIARERGQQGEEVTL

Homology

[Close]

BLAST of Lsi05G019320 vs. Swiss-Prot
Match: AUG7_ARATH (AUGMIN subunit 7 OS=Arabidopsis thaliana GN=AUG7 PE=1 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 3.7e-158
Identity = 280/328 (85.37%), Postives = 311/328 (94.82%), Query Frame = 1


Query: 1   MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAA+QMEEIQ+KL +L+YPRANAPAQSLLFAGMERYALLEWLFF+LLGDKSPFSQQN+QG
Sbjct: 1   MAAKQMEEIQKKLRLLSYPRANAPAQSLLFAGMERYALLEWLFFKLLGDKSPFSQQNLQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DA  RDEET RIQYLAEIAKFLGIT T+D E IQG G+YE+R EM+R IVDLVEAS+++D
Sbjct: 61  DAGVRDEETVRIQYLAEIAKFLGITPTVDIEAIQGHGTYEDRMEMLRNIVDLVEASLFSD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           N +WS+DEQVAKDIQLID+IAE+Q+ IFSEECKLFPADVQIQSIYPLPDVSELETKL+EQ
Sbjct: 121 NQEWSIDEQVAKDIQLIDAIAERQSLIFSEECKLFPADVQIQSIYPLPDVSELETKLSEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           +KIL NLQQKVDDLA+KHAYNPDEEYTEVESQLRA LESFLETAR+FN IYTKEIRPWTH
Sbjct: 181 AKILSNLQQKVDDLAAKHAYNPDEEYTEVESQLRARLESFLETARAFNTIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII 300
           MMEVPQLHGFGPAANRLLEAYNMLLKFLGNL+NLRDSHAAL+IGSS T+AGEPSSVTRI+
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLKNLRDSHAALSIGSSGTVAGEPSSVTRIV 300

Query: 301 SECESALTFLNRDLGILSASIARERGQQ 329
           S+CE+ALT LNRDLGILSASIARE+G++
Sbjct: 301 SDCEAALTVLNRDLGILSASIAREQGER 328

[Close]

BLAST of Lsi05G019320 vs. TrEMBL
Match: A0A0A0L7P0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126910 PE=4 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 8.8e-183
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 1


Query: 1   MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG
Sbjct: 1   MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD
Sbjct: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ
Sbjct: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH
Sbjct: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII 300
           MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII 300

Query: 301 SECESALTFLNRDLGILSASIARERGQQGEEVTL 335
           SECESALTFLNRDLGILSASIARERGQQGEEVTL
Sbjct: 301 SECESALTFLNRDLGILSASIARERGQQGEEVTL 334

[Close]

BLAST of Lsi05G019320 vs. TrEMBL
Match: A0A067KTW2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02617 PE=4 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 3.9e-170
Identity = 310/334 (92.81%), Postives = 323/334 (96.71%), Query Frame = 1


Query: 1   MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAA+QMEEIQRKL++LNYPRANAPAQSLLFAGMERYALLEWLFF+LLGDKSPFSQQN+QG
Sbjct: 1   MAAKQMEEIQRKLTVLNYPRANAPAQSLLFAGMERYALLEWLFFKLLGDKSPFSQQNLQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DA+DRDEET RIQYLAEIAKFLGITTTIDTE IQGRGSYE+RTEM+RL+VDLVEA IYAD
Sbjct: 61  DAMDRDEETARIQYLAEIAKFLGITTTIDTEAIQGRGSYEDRTEMLRLMVDLVEACIYAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NP+WSVDEQVAKDIQLIDSIAEKQA IFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ
Sbjct: 121 NPEWSVDEQVAKDIQLIDSIAEKQAVIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKILLNLQQKVDDLASKHAYNPDE+YTEVESQLRAHLESFLETAR FN+IYTKEIRPWTH
Sbjct: 181 SKILLNLQQKVDDLASKHAYNPDEDYTEVESQLRAHLESFLETARQFNLIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII 300
           MMEVPQLHGFGPAANRLLEAY MLLKFLGNLRNLRDSHAALA+GSSETIAGEPSSV RII
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYKMLLKFLGNLRNLRDSHAALAVGSSETIAGEPSSVIRII 300

Query: 301 SECESALTFLNRDLGILSASIARERGQQGEEVTL 335
           SECESALTFLNRDLGILSASIARER   G EVTL
Sbjct: 301 SECESALTFLNRDLGILSASIARER---GNEVTL 331

[Close]

BLAST of Lsi05G019320 vs. TrEMBL
Match: A0A0D2RAL1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G254100 PE=4 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 2.8e-168
Identity = 306/332 (92.17%), Postives = 321/332 (96.69%), Query Frame = 1


Query: 1   MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAA+QMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQN+QG
Sbjct: 1   MAAKQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNLQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DA+DRDEET RIQYLAEIAKFLGITTTIDTEVIQGRGSYE+RTEM+RLIVDLVEASI AD
Sbjct: 61  DAMDRDEETSRIQYLAEIAKFLGITTTIDTEVIQGRGSYEDRTEMLRLIVDLVEASICAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NP+WSVDEQVAKDIQLID+IAEKQA IFSEECKLFPADVQIQSIYPLPDVSELE+KLAEQ
Sbjct: 121 NPEWSVDEQVAKDIQLIDAIAEKQALIFSEECKLFPADVQIQSIYPLPDVSELESKLAEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKIL NLQQKVDDLASKHAYNPDEEYTEVES+LRA LESFLETARSFN+IYTKEIRPWTH
Sbjct: 181 SKILSNLQQKVDDLASKHAYNPDEEYTEVESKLRAQLESFLETARSFNMIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII 300
           MMEVPQLHGFGPAANRLLEAY MLLKFLGNLRNLRDSHAALA+GSSET+AGEPS VTRII
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYKMLLKFLGNLRNLRDSHAALAVGSSETVAGEPSPVTRII 300

Query: 301 SECESALTFLNRDLGILSASIARERGQQGEEV 333
           SECESALT LN DLGILSASIARE+  QG++V
Sbjct: 301 SECESALTSLNCDLGILSASIAREKAMQGQQV 332

[Close]

BLAST of Lsi05G019320 vs. TrEMBL
Match: A0A059C4W3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01755 PE=4 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 1.0e-167
Identity = 300/327 (91.74%), Postives = 320/327 (97.86%), Query Frame = 1


Query: 1   MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAA+QMEEIQ+KL+ LNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQN+QG
Sbjct: 1   MAAKQMEEIQKKLATLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNLQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           D +DRDEET RIQYLAEIAKFLGITTT+DTEVIQGRG+YE+RTEM++LIVDLVEASIYAD
Sbjct: 61  DPMDRDEETSRIQYLAEIAKFLGITTTVDTEVIQGRGTYEDRTEMLQLIVDLVEASIYAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NP+WSVDEQ AKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKL+EQ
Sbjct: 121 NPEWSVDEQAAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLSEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKIL+NLQQKVDDLASKHAYNPDEEYTEVE+QLRAHLESFLETAR+FN+IYTKEIRPWTH
Sbjct: 181 SKILMNLQQKVDDLASKHAYNPDEEYTEVEAQLRAHLESFLETARTFNMIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII 300
           MMEVPQLHGFGPAANRLLEAY MLLKFLGNLRNLRDS+AALA+G SET +GEPSSVTRII
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYKMLLKFLGNLRNLRDSYAALAVGLSETASGEPSSVTRII 300

Query: 301 SECESALTFLNRDLGILSASIARERGQ 328
           SECESALTFLNRDLGILSASIARERG+
Sbjct: 301 SECESALTFLNRDLGILSASIARERGE 327

[Close]

BLAST of Lsi05G019320 vs. TrEMBL
Match: V4TL88_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032078mg PE=4 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 1.8e-167
Identity = 301/328 (91.77%), Postives = 319/328 (97.26%), Query Frame = 1


Query: 1   MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAA+QMEEIQ+KL+MLNYPRANAPAQSLLFAGMERY+LLEWLFF+LLGDKSPFSQQN+QG
Sbjct: 1   MAAKQMEEIQKKLAMLNYPRANAPAQSLLFAGMERYSLLEWLFFKLLGDKSPFSQQNLQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DA+DRDEET RIQYLAEIAKFLGITTTIDTE IQG GSYE+RTEM+RLIVDLVEASIYAD
Sbjct: 61  DAMDRDEETARIQYLAEIAKFLGITTTIDTEAIQGHGSYEDRTEMLRLIVDLVEASIYAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NP+WS+DEQVAKDIQLIDSIAEKQA IFSEECKLFPADVQIQSIYPLPDVSELETKL+EQ
Sbjct: 121 NPEWSIDEQVAKDIQLIDSIAEKQALIFSEECKLFPADVQIQSIYPLPDVSELETKLSEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKILLNLQQKV DLASKHAYNPDE+Y EVESQLRAHLESFLETAR+FN IYTKEIRPWTH
Sbjct: 181 SKILLNLQQKVTDLASKHAYNPDEDYAEVESQLRAHLESFLETARTFNTIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII 300
           MMEVPQLHGFGPAANRLLEAY MLLKFLGNLRNLRDSHAALAIGSSET+AGEPSSVTRII
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYKMLLKFLGNLRNLRDSHAALAIGSSETVAGEPSSVTRII 300

Query: 301 SECESALTFLNRDLGILSASIARERGQQ 329
           SECESALTFLNR+L ILSASIARERG++
Sbjct: 301 SECESALTFLNRNLSILSASIARERGEK 328

[Close]

BLAST of Lsi05G019320 vs. TAIR10
Match: AT5G17620.1 (AT5G17620.1 Plant nuclear matrix 1 (InterPro:IPR010604))

HSP 1 Score: 558.9 bits (1439), Expect = 2.1e-159
Identity = 280/328 (85.37%), Postives = 311/328 (94.82%), Query Frame = 1


Query: 1   MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAA+QMEEIQ+KL +L+YPRANAPAQSLLFAGMERYALLEWLFF+LLGDKSPFSQQN+QG
Sbjct: 1   MAAKQMEEIQKKLRLLSYPRANAPAQSLLFAGMERYALLEWLFFKLLGDKSPFSQQNLQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DA  RDEET RIQYLAEIAKFLGIT T+D E IQG G+YE+R EM+R IVDLVEAS+++D
Sbjct: 61  DAGVRDEETVRIQYLAEIAKFLGITPTVDIEAIQGHGTYEDRMEMLRNIVDLVEASLFSD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           N +WS+DEQVAKDIQLID+IAE+Q+ IFSEECKLFPADVQIQSIYPLPDVSELETKL+EQ
Sbjct: 121 NQEWSIDEQVAKDIQLIDAIAERQSLIFSEECKLFPADVQIQSIYPLPDVSELETKLSEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           +KIL NLQQKVDDLA+KHAYNPDEEYTEVESQLRA LESFLETAR+FN IYTKEIRPWTH
Sbjct: 181 AKILSNLQQKVDDLAAKHAYNPDEEYTEVESQLRARLESFLETARAFNTIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII 300
           MMEVPQLHGFGPAANRLLEAYNMLLKFLGNL+NLRDSHAAL+IGSS T+AGEPSSVTRI+
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLKNLRDSHAALSIGSSGTVAGEPSSVTRIV 300

Query: 301 SECESALTFLNRDLGILSASIARERGQQ 329
           S+CE+ALT LNRDLGILSASIARE+G++
Sbjct: 301 SDCEAALTVLNRDLGILSASIAREQGER 328

[Close]

BLAST of Lsi05G019320 vs. NCBI nr
Match: gi|449432297|ref|XP_004133936.1| (PREDICTED: uncharacterized protein LOC101219290 [Cucumis sativus])

HSP 1 Score: 647.5 bits (1669), Expect = 1.3e-182
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 1


Query: 1   MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG
Sbjct: 1   MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD
Sbjct: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ
Sbjct: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH
Sbjct: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII 300
           MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII 300

Query: 301 SECESALTFLNRDLGILSASIARERGQQGEEVTL 335
           SECESALTFLNRDLGILSASIARERGQQGEEVTL
Sbjct: 301 SECESALTFLNRDLGILSASIARERGQQGEEVTL 334

[Close]

BLAST of Lsi05G019320 vs. NCBI nr
Match: gi|659075561|ref|XP_008438209.1| (PREDICTED: uncharacterized protein LOC103483382 [Cucumis melo])

HSP 1 Score: 642.1 bits (1655), Expect = 5.3e-181
Identity = 331/334 (99.10%), Postives = 332/334 (99.40%), Query Frame = 1


Query: 1   MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAARQMEEIQRKLS+LNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG
Sbjct: 1   MAARQMEEIQRKLSLLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD
Sbjct: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ
Sbjct: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH
Sbjct: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII 300
           MMEVPQLHGFGPAANRLLEAYN LLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYNKLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII 300

Query: 301 SECESALTFLNRDLGILSASIARERGQQGEEVTL 335
           SECESALTFLNRDLGILSASIARERGQQGEE TL
Sbjct: 301 SECESALTFLNRDLGILSASIARERGQQGEEFTL 334

[Close]

BLAST of Lsi05G019320 vs. NCBI nr
Match: gi|802585217|ref|XP_012070307.1| (PREDICTED: uncharacterized protein LOC105632522 [Jatropha curcas])

HSP 1 Score: 605.5 bits (1560), Expect = 5.5e-170
Identity = 310/334 (92.81%), Postives = 323/334 (96.71%), Query Frame = 1


Query: 1   MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAA+QMEEIQRKL++LNYPRANAPAQSLLFAGMERYALLEWLFF+LLGDKSPFSQQN+QG
Sbjct: 1   MAAKQMEEIQRKLTVLNYPRANAPAQSLLFAGMERYALLEWLFFKLLGDKSPFSQQNLQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DA+DRDEET RIQYLAEIAKFLGITTTIDTE IQGRGSYE+RTEM+RL+VDLVEA IYAD
Sbjct: 61  DAMDRDEETARIQYLAEIAKFLGITTTIDTEAIQGRGSYEDRTEMLRLMVDLVEACIYAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NP+WSVDEQVAKDIQLIDSIAEKQA IFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ
Sbjct: 121 NPEWSVDEQVAKDIQLIDSIAEKQAVIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKILLNLQQKVDDLASKHAYNPDE+YTEVESQLRAHLESFLETAR FN+IYTKEIRPWTH
Sbjct: 181 SKILLNLQQKVDDLASKHAYNPDEDYTEVESQLRAHLESFLETARQFNLIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII 300
           MMEVPQLHGFGPAANRLLEAY MLLKFLGNLRNLRDSHAALA+GSSETIAGEPSSV RII
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYKMLLKFLGNLRNLRDSHAALAVGSSETIAGEPSSVIRII 300

Query: 301 SECESALTFLNRDLGILSASIARERGQQGEEVTL 335
           SECESALTFLNRDLGILSASIARER   G EVTL
Sbjct: 301 SECESALTFLNRDLGILSASIARER---GNEVTL 331

[Close]

BLAST of Lsi05G019320 vs. NCBI nr
Match: gi|1009110355|ref|XP_015895151.1| (PREDICTED: AUGMIN subunit 7 [Ziziphus jujuba])

HSP 1 Score: 601.7 bits (1550), Expect = 8.0e-169
Identity = 309/334 (92.51%), Postives = 320/334 (95.81%), Query Frame = 1


Query: 1   MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAARQMEEIQRKL MLNYPRANAPAQSLLFAGMERY+LLEWLFFRLLGDKSPFSQQ +QG
Sbjct: 3   MAARQMEEIQRKLGMLNYPRANAPAQSLLFAGMERYSLLEWLFFRLLGDKSPFSQQTLQG 62

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           D +DRDEET RIQYLAEIAKFLGITT++DTE IQGRGSYE+RTEM+RLIVDLVEASIYAD
Sbjct: 63  DTMDRDEETARIQYLAEIAKFLGITTSVDTEAIQGRGSYEDRTEMLRLIVDLVEASIYAD 122

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NPDWSVDEQV KDIQLIDSIAEKQAQIFSE+CKLFPADVQIQSIYPL DVSELETKLAEQ
Sbjct: 123 NPDWSVDEQVTKDIQLIDSIAEKQAQIFSEDCKLFPADVQIQSIYPLHDVSELETKLAEQ 182

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKILLNLQQKVDDLASKHAYNPDEEY +VESQLRAHLESFLETARSFN+IYTKEIRPWTH
Sbjct: 183 SKILLNLQQKVDDLASKHAYNPDEEYMDVESQLRAHLESFLETARSFNMIYTKEIRPWTH 242

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII 300
           MMEVPQLHGFGPAANRLLEAY MLLKFLGNLRNLRDSHAALA+GSSETIAGEPSSVTRII
Sbjct: 243 MMEVPQLHGFGPAANRLLEAYKMLLKFLGNLRNLRDSHAALAVGSSETIAGEPSSVTRII 302

Query: 301 SECESALTFLNRDLGILSASIARERGQQGEEVTL 335
           SECESALTFLNRDLGILSASIARE   Q EEV L
Sbjct: 303 SECESALTFLNRDLGILSASIARE---QDEEVNL 333

[Close]

BLAST of Lsi05G019320 vs. NCBI nr
Match: gi|823153862|ref|XP_012476780.1| (PREDICTED: uncharacterized protein LOC105792653 [Gossypium raimondii])

HSP 1 Score: 599.4 bits (1544), Expect = 4.0e-168
Identity = 306/332 (92.17%), Postives = 321/332 (96.69%), Query Frame = 1


Query: 1   MAARQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNIQG 60
           MAA+QMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQN+QG
Sbjct: 1   MAAKQMEEIQRKLSMLNYPRANAPAQSLLFAGMERYALLEWLFFRLLGDKSPFSQQNLQG 60

Query: 61  DAIDRDEETGRIQYLAEIAKFLGITTTIDTEVIQGRGSYEERTEMIRLIVDLVEASIYAD 120
           DA+DRDEET RIQYLAEIAKFLGITTTIDTEVIQGRGSYE+RTEM+RLIVDLVEASI AD
Sbjct: 61  DAMDRDEETSRIQYLAEIAKFLGITTTIDTEVIQGRGSYEDRTEMLRLIVDLVEASICAD 120

Query: 121 NPDWSVDEQVAKDIQLIDSIAEKQAQIFSEECKLFPADVQIQSIYPLPDVSELETKLAEQ 180
           NP+WSVDEQVAKDIQLID+IAEKQA IFSEECKLFPADVQIQSIYPLPDVSELE+KLAEQ
Sbjct: 121 NPEWSVDEQVAKDIQLIDAIAEKQALIFSEECKLFPADVQIQSIYPLPDVSELESKLAEQ 180

Query: 181 SKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTKEIRPWTH 240
           SKIL NLQQKVDDLASKHAYNPDEEYTEVES+LRA LESFLETARSFN+IYTKEIRPWTH
Sbjct: 181 SKILSNLQQKVDDLASKHAYNPDEEYTEVESKLRAQLESFLETARSFNMIYTKEIRPWTH 240

Query: 241 MMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEPSSVTRII 300
           MMEVPQLHGFGPAANRLLEAY MLLKFLGNLRNLRDSHAALA+GSSET+AGEPS VTRII
Sbjct: 241 MMEVPQLHGFGPAANRLLEAYKMLLKFLGNLRNLRDSHAALAVGSSETVAGEPSPVTRII 300

Query: 301 SECESALTFLNRDLGILSASIARERGQQGEEV 333
           SECESALT LN DLGILSASIARE+  QG++V
Sbjct: 301 SECESALTSLNCDLGILSASIAREKAMQGQQV 332

The following BLAST results are available for this feature:

BLAST of Lsi05G019320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AUG7_ARATH	3.7e-158	85.37	AUGMIN subunit 7 OS=Arabidopsis thaliana GN=AUG7 PE=1 SV=1	[more]

BLAST of Lsi05G019320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7P0_CUCSA	8.8e-183	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126910 PE=4 SV=1	[more]
A0A067KTW2_JATCU	3.9e-170	92.81	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02617 PE=4 SV=1	[more]
A0A0D2RAL1_GOSRA	2.8e-168	92.17	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G254100 PE=4 SV=1	[more]
A0A059C4W3_EUCGR	1.0e-167	91.74	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01755 PE=4 SV=1	[more]
V4TL88_9ROSI	1.8e-167	91.77	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032078mg PE=4 SV=1	[more]

BLAST of Lsi05G019320 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17620.1	2.1e-159	85.37	Plant nuclear matrix 1 (InterPro:IPR010604)	[more]

BLAST of Lsi05G019320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432297\|ref\|XP_004133936.1\|	1.3e-182	100.00	PREDICTED: uncharacterized protein LOC101219290 [Cucumis sativus]	[more]
gi\|659075561\|ref\|XP_008438209.1\|	5.3e-181	99.10	PREDICTED: uncharacterized protein LOC103483382 [Cucumis melo]	[more]
gi\|802585217\|ref\|XP_012070307.1\|	5.5e-170	92.81	PREDICTED: uncharacterized protein LOC105632522 [Jatropha curcas]	[more]
gi\|1009110355\|ref\|XP_015895151.1\|	8.0e-169	92.51	PREDICTED: AUGMIN subunit 7 [Ziziphus jujuba]	[more]
gi\|823153862\|ref\|XP_012476780.1\|	4.0e-168	92.17	PREDICTED: uncharacterized protein LOC105792653 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010604	Plant_AUG7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009524	phragmoplast
cellular_component	GO:0005876	spindle microtubule
cellular_component	GO:0045298	tubulin complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0051011	microtubule minus-end binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G019320.1	Lsi05G019320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010604	Plant AUGMIN subunit 7	PIR	PIRSF028655	NMP1	coord: 1..332 score: 3.9E
IPR010604	Plant AUGMIN subunit 7	PFAM	PF06694	Plant_NMP1	coord: 6..324 score: 9.1E
None	No IPR available	unknown	Coil	Coil	coord: 170..197 scor
None	No IPR available	PANTHER	PTHR14352	FAMILY NOT NAMED	coord: 1..328 score: 2.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G019320	Csa3G126910	Cucumber (Chinese Long) v2	culsiB209
Lsi05G019320	CSPI03G09820	Wild cucumber (PI 183967)	cpilsiB207
Lsi05G019320	Cucsa.257370	Cucumber (Gy14) v1	cgylsiB415
Lsi05G019320	CmaCh06G011530	Cucurbita maxima (Rimu)	cmalsiB764
Lsi05G019320	CmoCh06G011840	Cucurbita moschata (Rifu)	cmolsiB757
Lsi05G019320	Cla021336	Watermelon (97103) v1	lsiwmB365
Lsi05G019320	MELO3C006218	Melon (DHL92) v3.5.1	lsimeB378
Lsi05G019320	ClCG05G002520	Watermelon (Charleston Gray)	lsiwcgB335
Lsi05G019320	MELO3C006218.2	Melon (DHL92) v3.6.1	lsimedB396
Lsi05G019320	Cla97C05G083030	Watermelon (97103) v2	lsiwmbB333
Lsi05G019320	Bhi01G000057	Wax gourd	lsiwgoB445
Lsi05G019320	Cp4.1LG08g02010	Cucurbita pepo (Zucchini)	cpelsiB714
Lsi05G019320	CsGy3G009910	Cucumber (Gy14) v2	cgyblsiB196
Lsi05G019320	Carg06363	Silver-seed gourd	carlsiB878
Lsi05G019320	CsaV3_3G009970	Cucumber (Chinese Long) v3	cuclsiB228

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G019320	Watermelon (97103) v2	lsiwmbB345
Lsi05G019320	Wax gourd	lsiwgoB417
Lsi05G019320	Bottle gourd (USVL1VR-Ls)	lsilsiB007
Lsi05G019320	Cucumber (Gy14) v1	cgylsiB585
Lsi05G019320	Cucurbita maxima (Rimu)	cmalsiB007
Lsi05G019320	Cucurbita maxima (Rimu)	cmalsiB245
Lsi05G019320	Cucurbita maxima (Rimu)	cmalsiB356
Lsi05G019320	Cucurbita maxima (Rimu)	cmalsiB835
Lsi05G019320	Cucurbita moschata (Rifu)	cmolsiB233
Lsi05G019320	Cucurbita moschata (Rifu)	cmolsiB345
Lsi05G019320	Cucurbita moschata (Rifu)	cmolsiB820
Lsi05G019320	Cucurbita pepo (Zucchini)	cpelsiB122
Lsi05G019320	Cucurbita pepo (Zucchini)	cpelsiB274
Lsi05G019320	Cucurbita pepo (Zucchini)	cpelsiB506
Lsi05G019320	Wild cucumber (PI 183967)	cpilsiB470
Lsi05G019320	Cucumber (Chinese Long) v2	culsiB462
Lsi05G019320	Melon (DHL92) v3.5.1	lsimeB343
Lsi05G019320	Watermelon (Charleston Gray)	lsiwcgB346
Lsi05G019320	Watermelon (97103) v1	lsiwmB385
Lsi05G019320	Cucumber (Gy14) v2	cgyblsiB430
Lsi05G019320	Melon (DHL92) v3.6.1	lsimedB360
Lsi05G019320	Silver-seed gourd	carlsiB206
Lsi05G019320	Silver-seed gourd	carlsiB565
Lsi05G019320	Silver-seed gourd	carlsiB985
Lsi05G019320	Cucumber (Chinese Long) v3	cuclsiB491