Lsi05G018830 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACTATTCGCACCCGCCGCCGATGCTGGTGAACTGCTCCGGCTGCCGGACTCCTCTCCAGCTCCCGCCGGGAGCTCCGTCGATTCGGTGCGCTATATGCAAGGCTGTGACACAGGTTATGGACCCACGTGCCGTCCCTCCGCCGTCGCCTTCTCATGCGCCTCCGCCGGCTCCATCGCCCTACAACCATGCGCCACCAGGACCTCCAGCTCACCCACATGGCCGTAAAAGGGCTGTGATCTGTGGGATCTCTTATAGGTACTCGAGACATGAGCTGAAGGGCTGCCTTAACGATGCTAAGTGTATGCGTTATCTTTTGATCAATAAATTCCATTTTCCAGAAGATTCTATCCTCATGCTTACAGGTACTTTTGCCCAACTCTCTCTCTCTATCTCTGTAGTTCCATCATGAAAATTACTGTGTATTGCTATTTGCTTGTTGATCCTAACTCTCTAATTGTTATGGAAAACACAACTCTCTTCGGCTTCTTGTAATTCTGATGGGCTCATTCTTATAGGAAATGTTTGAATGGCCACTTTTGTTTGTCTTTATATTTGGAAGCATCAGAGATTTCACTTGTGTGTTTTAAGACCTCTAAGGATATATTACCTTACTTGAATAGAAAACAGATTGTACGGACCTATGAGGATATGTTGTTGAGTGTTGGATATAATTTATAGTCATTTTGCAAACATATTACACGGACAGAAGATTAATTGTTAGGAAATGAAATGGAAAATGGTAATCTTATGCTTTTAGGGAGGGTATATTCTGGGTCCAGTTTTAGAACTATGGATATGTAACAAGAAAATGGTAAAACTGTACACTTAGAGGCCGTCACTCTCGACGACTACCTGACTCTAGGAACAGGCTGGGGTGTGTGCTATTTTGTGGTTGCTTTGGGGGAGAAACAACAGAATCTTCAAGGGTTATGAGATTTTATGTCGATGTGTGGTCCTTGTTAGACTCTTGTAAATATTCGCTTGATCTTATTTCTCTTGACTAGAATCTCTTCTTGTAGTTTGTTTTTTATTTATATTTATTTATGTCTTTGTATTCTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTGTTTTCTTGGATGAATGTCATTCTTTTCATCGGGGGACGACCTCCTCCTCCTTCTTGGCTTGGCCCATGTAGCATAGTAGTTATCACGTTGAGTTGAAGAACCCTTTGGAGTTCGTAGTAGAGATCCACTTTTGTGACCAGAATATCTTTGGGAAAATATCAAAGATGATAAGAGGCTTATTTATTTTGAGTCCTATATAAGCAGCAAATCGGATTATTTATTTATTTATTGTTCTTTTTTGGGGGGAATAGGAAACGATAAGTATATTAGAAAAGTCCAAAGCAAGGGCCACAAATGAACGACCTAAGGGTTGGGGTAAAGGAAACCCCTGCCCTTAAATTCACGAATGAAGGCCTTCTAATTAGTTATACTGAGAAGAAGCTGTATGTTTCACACCATTACAACAGAAATCAAAAGGTAATAACGTATCTTCAAATATTATTTGGTTTCTTTATCTCCAATTGAGCCAAAGGAGGCCTTGATTTTAGCCTTGCCTTGGAGATTCCAACCACCTAAAGCTTCAACCATCCAAAATTCTATTTTTTTTGGGAAGAGAAACTTAAATTCCGATATCAAATAAGATTTAGCTGTTCTTATTAAAAGAAAAAAAAAATGTAGGCTGATTTCCAATTTATATTGGAGGGTGATCTCTTTAAATGAATTCTGAGCACATCTCTGCATATCCGTTGTTTTTTTGCAAACTTCCTAAGCTTTTGTGAAATGCAGAAGAAGATTTAGGCTCTATAAGTTATCTCCTCATGCCCTCAATTATCAATCACTCTGATTTATTTCTGTATCTTCTTGTCCCACCACTTGTTTTTACTTATGGTCATTCCGGAAAATGAAATGCAGAAGAAGAAACTGATCCCTACAGAATTCCCTACAAAAACAACATTAGAATGGCATTGTATTGGCTAGTACAAGGTTGTCAACCAGGTGACTCCTTGGTATTCCATTATTCCGGCCACGGTTCTCGCCAAAGGAACTACAACGGTGATGAAGTAGATGGATATGATGAAACTCTTTGCCCTCTGGATTTTGAAACTCAGGGAATGATTATTGATGATGAAATTAATACGGCCATTGTTAGACCTCTTCCTCAAGGCGTAAAGCTTCATGCATTCATAGATGCTTGCCATAGTGGCACCGTACTAGATTTGCCATTTCTATGCAGAATGGGCAGGTTGGTATCTTATAAATATGCTTATGTTTTCTAGCTGAGACATCGATGTTACTCGCACCGAAGTTGATAGTTTTAACTATCCAAAAGAAGATATAGTAGTGATAGAAAAGAAACGGTTAAAAGGTCATTTTGGTCCCTGTACTTTAAGATTTGTTCAATTTTAGTCCATATACTTTCAAATCCAATTTTAATCCCTAAACTTTTAATGAATTTTAAATGTAGTCTCTACTTCTAGTTTATTGTTGATTTTTCAAAAAAACGTTTTATTATCTATTAACATTTTTACTATAAATTTTGGAAACATATTCACATATTATATTTTCTTGCATGAAAATCATTATTATTATTGAATCAATTTTGATTTTAAAAAAAAAAATTCGAGGGACTAAGTTTAAGATTGATTGAAAGTACATGGACTAAAATTGGACATTTGAAAGCATGGGACTAAAATTGAACAAGCTCCAAAATACAAGGACCAAAATGATATTTTAACCAAAATTTCTTTTATGTATCTTCACTTTTCCCCCTGGTTATAGGAGTGGACAATACATGTGGGAGGACCACCGCCCGCGATCCGGAGTATGGAAAGGAACTAGTGGTGGAGAAGCTATTTCTTTCAGTGGCTGTGATGATAACCAAACCTCTGCTGATACATCTGTAAGTTCTATAATCCACAATTCATTTTATTCCATTAGAATTGCTTTATATGACGAAATTATTTGAAGAGATCTGTTCTATAGGTTGTACAATGTCCTTGAGTTCTAAAGAATTGCTTCATATATGAAATGTAATGATGCTTAGCTAATTACTTTAAACGGGAACAGGCTTTATCAAAGATAACATCAACAGGTGCCATGACTTTCTGCTTCATCCAAGCTATCGAGCGAGGACATGGAACTACATATGGAAGCATACTGAACTCTATGCGAAATGCTATAAAAAATGCTGGTGGTAGTGGTGACATTGGCGGTGGCGCTGTGACGTCTTTGGTCACCATGCTTTTGACCGGAGGAAGCGCCCTCGGTGGGCTCAGACAGGTACTTCAATTTTCATGGTAG ATGTACTATTCGCACCCGCCGCCGATGCTGGTGAACTGCTCCGGCTGCCGGACTCCTCTCCAGCTCCCGCCGGGAGCTCCGTCGATTCGGTGCGCTATATGCAAGGCTGTGACACAGGTTATGGACCCACGTGCCGTCCCTCCGCCGTCGCCTTCTCATGCGCCTCCGCCGGCTCCATCGCCCTACAACCATGCGCCACCAGGACCTCCAGCTCACCCACATGGCCGTAAAAGGGCTGTGATCTGTGGGATCTCTTATAGGTACTCGAGACATGAGCTGAAGGGCTGCCTTAACGATGCTAAGTGTATGCGTTATCTTTTGATCAATAAATTCCATTTTCCAGAAGATTCTATCCTCATGCTTACAGAAGAAGAAACTGATCCCTACAGAATTCCCTACAAAAACAACATTAGAATGGCATTGTATTGGCTAGTACAAGGTTGTCAACCAGGTGACTCCTTGGTATTCCATTATTCCGGCCACGGTTCTCGCCAAAGGAACTACAACGGTGATGAAGTAGATGGATATGATGAAACTCTTTGCCCTCTGGATTTTGAAACTCAGGGAATGATTATTGATGATGAAATTAATACGGCCATTGTTAGACCTCTTCCTCAAGGCGTAAAGCTTCATGCATTCATAGATGCTTGCCATAGTGGCACCGTACTAGATTTGCCATTTCTATGCAGAATGGGCAGGTTGGCTTTATCAAAGATAACATCAACAGGTGCCATGACTTTCTGCTTCATCCAAGCTATCGAGCGAGGACATGGAACTACATATGGAAGCATACTGAACTCTATGCGAAATGCTATAAAAAATGCTGGTGGTAGTGGTGACATTGGCGGTGGCGCTGTGACGTCTTTGGTCACCATGCTTTTGACCGGAGGAAGCGCCCTCGGTGGGCTCAGACAGGTACTTCAATTTTCATGGTAG ATGTACTATTCGCACCCGCCGCCGATGCTGGTGAACTGCTCCGGCTGCCGGACTCCTCTCCAGCTCCCGCCGGGAGCTCCGTCGATTCGGTGCGCTATATGCAAGGCTGTGACACAGGTTATGGACCCACGTGCCGTCCCTCCGCCGTCGCCTTCTCATGCGCCTCCGCCGGCTCCATCGCCCTACAACCATGCGCCACCAGGACCTCCAGCTCACCCACATGGCCGTAAAAGGGCTGTGATCTGTGGGATCTCTTATAGGTACTCGAGACATGAGCTGAAGGGCTGCCTTAACGATGCTAAGTGTATGCGTTATCTTTTGATCAATAAATTCCATTTTCCAGAAGATTCTATCCTCATGCTTACAGAAGAAGAAACTGATCCCTACAGAATTCCCTACAAAAACAACATTAGAATGGCATTGTATTGGCTAGTACAAGGTTGTCAACCAGGTGACTCCTTGGTATTCCATTATTCCGGCCACGGTTCTCGCCAAAGGAACTACAACGGTGATGAAGTAGATGGATATGATGAAACTCTTTGCCCTCTGGATTTTGAAACTCAGGGAATGATTATTGATGATGAAATTAATACGGCCATTGTTAGACCTCTTCCTCAAGGCGTAAAGCTTCATGCATTCATAGATGCTTGCCATAGTGGCACCGTACTAGATTTGCCATTTCTATGCAGAATGGGCAGGTTGGCTTTATCAAAGATAACATCAACAGGTGCCATGACTTTCTGCTTCATCCAAGCTATCGAGCGAGGACATGGAACTACATATGGAAGCATACTGAACTCTATGCGAAATGCTATAAAAAATGCTGGTGGTAGTGGTGACATTGGCGGTGGCGCTGTGACGTCTTTGGTCACCATGCTTTTGACCGGAGGAAGCGCCCTCGGTGGGCTCAGACAGGTACTTCAATTTTCATGGTAG MYYSHPPPMLVNCSGCRTPLQLPPGAPSIRCAICKAVTQVMDPRAVPPPSPSHAPPPAPSPYNHAPPGPPAHPHGRKRAVICGISYRYSRHELKGCLNDAKCMRYLLINKFHFPEDSILMLTEEETDPYRIPYKNNIRMALYWLVQGCQPGDSLVFHYSGHGSRQRNYNGDEVDGYDETLCPLDFETQGMIIDDEINTAIVRPLPQGVKLHAFIDACHSGTVLDLPFLCRMGRLALSKITSTGAMTFCFIQAIERGHGTTYGSILNSMRNAIKNAGGSGDIGGGAVTSLVTMLLTGGSALGGLRQVLQFSW
BLAST of Lsi05G018830 vs. Swiss-Prot
Match: MCA1_ARATH (Metacaspase-1 OS=Arabidopsis thaliana GN=AMC1 PE=1 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 7.8e-110 Identity = 189/229 (82.53%), Postives = 200/229 (87.34%), Query Frame = 1
BLAST of Lsi05G018830 vs. Swiss-Prot
Match: MCA2_ARATH (Metacaspase-2 OS=Arabidopsis thaliana GN=AMC2 PE=1 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 1.3e-80 Identity = 151/271 (55.72%), Postives = 179/271 (66.05%), Query Frame = 1
BLAST of Lsi05G018830 vs. Swiss-Prot
Match: MCA3_ARATH (Metacaspase-3 OS=Arabidopsis thaliana GN=AMC3 PE=2 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 4.8e-59 Identity = 138/317 (43.53%), Postives = 176/317 (55.52%), Query Frame = 1
BLAST of Lsi05G018830 vs. Swiss-Prot
Match: MCA1_ASHGO (Metacaspase-1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MCA1 PE=3 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.8e-42 Identity = 85/179 (47.49%), Postives = 122/179 (68.16%), Query Frame = 1
BLAST of Lsi05G018830 vs. Swiss-Prot
Match: MCA1_PICGU (Metacaspase-1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=MCA1 PE=3 SV=2) HSP 1 Score: 172.2 bits (435), Expect = 9.1e-42 Identity = 76/154 (49.35%), Postives = 109/154 (70.78%), Query Frame = 1
BLAST of Lsi05G018830 vs. TrEMBL
Match: A0A0A0L401_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129470 PE=4 SV=1) HSP 1 Score: 582.4 bits (1500), Expect = 3.3e-163 Identity = 293/353 (83.00%), Postives = 300/353 (84.99%), Query Frame = 1
BLAST of Lsi05G018830 vs. TrEMBL
Match: A0A067JF71_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26328 PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 6.0e-125 Identity = 235/356 (66.01%), Postives = 262/356 (73.60%), Query Frame = 1
BLAST of Lsi05G018830 vs. TrEMBL
Match: B9RA22_RICCO (Caspase, putative OS=Ricinus communis GN=RCOM_1502860 PE=4 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 1.6e-122 Identity = 233/353 (66.01%), Postives = 261/353 (73.94%), Query Frame = 1
BLAST of Lsi05G018830 vs. TrEMBL
Match: A0A167MHN7_HEVBR (Metacaspase 1 OS=Hevea brasiliensis PE=2 SV=1) HSP 1 Score: 443.0 bits (1138), Expect = 3.1e-121 Identity = 229/353 (64.87%), Postives = 261/353 (73.94%), Query Frame = 1
BLAST of Lsi05G018830 vs. TrEMBL
Match: A5BJY1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030848 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 1.9e-118 Identity = 223/339 (65.78%), Postives = 258/339 (76.11%), Query Frame = 1
BLAST of Lsi05G018830 vs. TAIR10
Match: AT1G02170.1 (AT1G02170.1 metacaspase 1) HSP 1 Score: 398.3 bits (1022), Expect = 4.4e-111 Identity = 189/229 (82.53%), Postives = 200/229 (87.34%), Query Frame = 1
BLAST of Lsi05G018830 vs. TAIR10
Match: AT4G25110.1 (AT4G25110.1 metacaspase 2) HSP 1 Score: 301.2 bits (770), Expect = 7.3e-82 Identity = 151/271 (55.72%), Postives = 179/271 (66.05%), Query Frame = 1
BLAST of Lsi05G018830 vs. TAIR10
Match: AT5G64240.2 (AT5G64240.2 metacaspase 3) HSP 1 Score: 229.6 bits (584), Expect = 2.7e-60 Identity = 138/317 (43.53%), Postives = 176/317 (55.52%), Query Frame = 1
BLAST of Lsi05G018830 vs. TAIR10
Match: AT1G79330.1 (AT1G79330.1 metacaspase 5) HSP 1 Score: 107.8 bits (268), Expect = 1.2e-23 Identity = 58/149 (38.93%), Postives = 88/149 (59.06%), Query Frame = 1
BLAST of Lsi05G018830 vs. TAIR10
Match: AT1G79310.1 (AT1G79310.1 metacaspase 7) HSP 1 Score: 105.9 bits (263), Expect = 4.5e-23 Identity = 57/149 (38.26%), Postives = 87/149 (58.39%), Query Frame = 1
BLAST of Lsi05G018830 vs. NCBI nr
Match: gi|778677701|ref|XP_004133968.2| (PREDICTED: metacaspase-1-like [Cucumis sativus]) HSP 1 Score: 582.4 bits (1500), Expect = 4.7e-163 Identity = 293/353 (83.00%), Postives = 300/353 (84.99%), Query Frame = 1
BLAST of Lsi05G018830 vs. NCBI nr
Match: gi|700201557|gb|KGN56690.1| (hypothetical protein Csa_3G129470 [Cucumis sativus]) HSP 1 Score: 582.4 bits (1500), Expect = 4.7e-163 Identity = 293/353 (83.00%), Postives = 300/353 (84.99%), Query Frame = 1
BLAST of Lsi05G018830 vs. NCBI nr
Match: gi|659075705|ref|XP_008438285.1| (PREDICTED: metacaspase-1 [Cucumis melo]) HSP 1 Score: 495.4 bits (1274), Expect = 7.5e-137 Identity = 263/353 (74.50%), Postives = 274/353 (77.62%), Query Frame = 1
BLAST of Lsi05G018830 vs. NCBI nr
Match: gi|720044329|ref|XP_010269855.1| (PREDICTED: metacaspase-1-like [Nelumbo nucifera]) HSP 1 Score: 493.8 bits (1270), Expect = 2.2e-136 Identity = 254/350 (72.57%), Postives = 267/350 (76.29%), Query Frame = 1
BLAST of Lsi05G018830 vs. NCBI nr
Match: gi|729341352|ref|XP_010540205.1| (PREDICTED: metacaspase-1 [Tarenaya hassleriana]) HSP 1 Score: 464.9 bits (1195), Expect = 1.1e-127 Identity = 236/342 (69.01%), Postives = 257/342 (75.15%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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