Lsi05G018670 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi05G018670
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionRNA binding protein, putative
Locationchr05 : 25898064 .. 25904208 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAGAAACCCCTCTTGGCTTATAAATCACGTCCTCGTTATTAGGGTTTCAAATTTCCCACCGCCCTATATATTCTCAATTTCCTATCCTTCGTCTATCGTTTCTACTTTCTAGGTTTCTTCTTTCTTTCGATTTTGAAGCGTTTGTCTAATCGCTCTTTCTTCCACCACCCGATTTTCTTCTCTCAAGAGTTTCTAGGGTTGTTTTATCTTCAACGTTTCAGATCTGTGTAATTGTTGTGATAATTCTGCGAATTTTCTGAGATGCCTCCTAGGACGGTAAAGAGAGGGGCGGCGTCTGCGGGTTCGAAGAGAGGTGGGAGGGTAACCAGAGGGACACCGAAGAAGCAAGATCAGCCGGTGGAAAGGGAGGTTGCGGAAGAGACGGTGAAGGTCGAGGAGGTCTCCGTGGTCGAGGTTGAAACCAAGGAGCTTCGCGAGGAAGTCACGGTGCAGGAAAAAAGCCCTGTTGTAGAAGATAAGCCCGTTATTCAGAATAAACCGGTAGTTGTGGAGGAGAAACAACCGATTGCTATAGACGTTGAGGAGGTCGAACCTTCTCACGAAGTCAGATCGGATTTGAAGTCCATTCCTCCTAAAAGTAAGTATTCTCCTCTGAATTCCAGCACGTTGCTGGTAGGGTTAGTAATCGTTAGCTTTTATTTTTATCTTTATTTTTATGTGCGTTTAATTGACGGTATATTCTAATTCTATTGGTTTGTTATACAACGGAGGATAATCTTTTGTGTTTTTTCGTATTTGAGACGTTACTTCTTGCATTATTTTTAGTGCATTATTTCCTAAAGCTCCCGAAGTTGGGTGGATATACTTATATGGCGAAGAAACTACTAGTTTATCAGGGTAAGTATTAATTAAAATTATCTTTTGAGGATGGAGACGTAAAAATTGCGATCGAACAATGCGTACTTTGGGTACAAACTAATTATGTTTTTCGGGGAATTTCATTGTCTTAACTTACCCTCCTTCGCTTAGCCCAAAGTTCTGAGTTTTGTCGGTATAATGTGGCTGGACATTTTTCTATGTCAAGTTTCAGTGACACGCTTTGGTTTTTACTATTTAATATACTCGGTGTGTTTTCGAGTGAATTGTTGACCGGGATAGATCATCAATCTACATATCGTTTCAGAAGAAGAAGAAGTAAAAGATGAAGAATATGGAAAGGACGAGCGCTTGGATCTTGAAGATAATGATCCCGAATCAGAACCTGAGGAGGATGGAGGATTTGAGTATGATGAAAAAGAAATTGAACAAGAGGATGTTCAGGAGGTAGTAGATGGAGAGGGGGAGCCTGAGGACAACGTGGGTGATGAGGAGGGTGATATGGTTGAAGACGATGCTGAGGATGCTCAGGAGGATCTCGAGGTTGAAGAGGATGATCAGCAAGCTGGTGAAGACCATGAGCATGCTGGCATGGTTGATGTCGACGAGGACGAGCATAATGAAGTTGTAAAAGAGAGGCGTAAACGCAAGGAGTTTGAAGTGTTTGTTGGAGGCTTGGACAAGGATGTAAAAGAGGAGGATCTGAAGAAAGTTTTCAGTGCAGTTGGTGAAGTTACTGAAGTCAGGCTAATGATGAACCCCCAGACAAAGAAGAACAAAGGTTTTGCATTCTTACGTTTTGCTAGTGTGGAAGAGGCAAAACGAGCTGTGTCAGAGCTAAAGAACCCAGTGGTATTTTAAGCATTATTTTAATCCTTTCCTGTTTACTTAAGATAATGGTAAGATTTGGACATACCTCCTCAATTTTATCTCAATTAATGAAATTCCAGATCAATGGGAAACAATGTGGTGTGACTCCAAGTCAAGACAGTGACACCCTTTTTCTTGGTAACATATGCAAGACATGGAAAAAGGATGCCGTAAGTTTTGGGTTTATCAAAATTTATTGATCAGTGAGTTTTATTTTTTGTTATAAGGAGCTATGAATTTCCTGACATTATGATATTACTGTATATGGATCCAGCTGAAGGAGAAGTTGAAACATTATGGAGTTGATAATGTTGAGGATCTGACATTGGTAGAAGATAGTAATAATGAAGGATCAAATCGTGGATTTGCCTTTTTGGAATTTTCATCTCGTTCAGATGCTATGGATGCCTTCAAGCGTCTTCAAAAAAGGGATGTTGTATTTGGAGTTGATAGGCCTGCCAAAGTGTCGTTTGCTGATTCTTTTATAGATCCTGGTGATGAAATTATGGCACAGGTTAGCTTTGAGATAACTATTTGAAATTCTTCAATTGAAGTGGCCTGTATTCAATTTTTCTGACCCATTAGCCTATTGGAATTAAATTGTTGCTAGTGCTAGCATTGTTTTAAGCTTGCGGAAGTAGTAGAATTTGTTGTTTGGATATAAAATATGGAGCTTTTCATTATTTCACGAGATAGTTATCAAGGGGGTCAAATACGTCGATGTTTTTATTATATATGGTTTTATCTACTTATGCCTGTATTTTTTTTGGTTATCAAGTGTCTCTTGTTAGGTTAACTGGGTGGGTGTTGTTTTAACTGTACATGTATTTAGGTTCATCTTTTTCATCTTTCATTGCATGTAGTTGGTATTTGGATTTTTTTTTTCACACTGTTTCTGTTAGAATGTTCAATGTTATGCAATTGTTATTGTCACACAAACAGGTCAAGACTGTTTTTGTTGATAGTCTCCCTGCCTCATGGGATGAAGAATTTGTTCGAGGACTCCTTAAGAAGTATGGGGAGATTGAAAAAATCGAGCTTGCTCGAAATATGCCATCGGCAAAGAGAAAGGATTTTGGTTTTGTTACATTTGACACACATGATGCTGCAGTTTCATGTGCAAAAAGCATCAACAACTCAGAACTTGGTGAAGGGGACAACAAGGTATGTATGTGTTTTGAAGAATTAATGGGATTTATTTTCTATGGTGTTTTTCAGGTTCCTGTTTCTGAAACAACTATTTTCTTCGATTACCATGTCTACTAGGCTAAAGTAAGGGCTAGATTATCTAGACCACTGCAAAGAGGCAAAGGAAAACATGCTAGTCGTGCTGATTATTGGCCTGGACGCACAACTGGACGAGCAGTAAGGGGTTCTTGGGGGAGACCGGCTCCACGAAGTGTTCCTGTTCGAGGAGTAAGAGGTGTTGGCAGCCATCTCCCACCTGTCAGTGTAAAGAGGCCCAGTGGTGTTAGAGATAGACGTCCTGTCATTGCAGTCCCAGCACGAGGAAGAGCAATTGCTCCTGTAGCAAGGTCTTACGACAGGGGGCCTCCTGGTATGGATAATTTTATATGAATAGTTGAAGTTTGTATCCAACATTGAGTTACTAATGTATTTTTTTGTATAGTTGCTTCTTACTCAAAGAGTAGCTTGAAGAGGGAGTATGGTCGGCGGGAGGAGCTGCATCCATCCAGAAGCCGAATGCTCGTTGATTATTCCTCTAGAGTTGTACCTGAAAGAAATCCATCCTATAGAGATGAATATGCTTCTCGGGCTGCTGCCTTCTCTGATCAACCTCGGAGAGATGCACCCAGGAGAGCTTATGTAGATGATGGATATGGGCGAAGGTTTGAGAGACCCCCTCCTGCAAGCTACCGTGATGTACGTGCACGTGATTATGATGCTCTAATTGGATCAAAGCGCCCATATTCTTCATTGGTACGATTTATTTAATGCATGTTACATTTGATTTCATGCAAGAAGACCCTAACTTCTTTTGGCCAACTTTTAGAGTGATGTGCCTCCAGCTTATGCTGATGCTGGTGTTCGTCAATCAAGAAGTCGTTTAGACTATGATTATGGTGCTGGTGCTTCTCAATATGGAGATGCCTATGATGGCAGGTTTGTTAAATACCCTCCATCCTTTTAACACAGTGATAGAGATTATGAATAGCGAAAAACAGACAGAAATGAATAGATAGATTGTCTGCTATTTGATTAGATGAGATATAATTGCAATTTATTTGTATCTTGACTTTTAGTTCTATTGTTTTACTAACTCAGATTTCTGGTTGGTAGGATTGGCAGATCAAATATTGGAGGATATGATAGTCGAAGTTCCATCTCAGGTCAGGGCTTATACTTGGTGTATGCGGAAGCCATCAGGTTGTGAGATATGGAGGAAGTTTGATTTATTATTCTATGCTTATGAGCTTCCATTGATATTTCAGGTTCTTTCAGTAGTGATGTCAGTGGAATGTACTCGTCAAGCTATGGTGGTGACTATATGACTCGTGGTAGCAATGTACGAAGTAGTTTCTTCCTTCTCTTTTGGTCTTTATGTTGTGATTTCTTTTTTTCATCTTGATGATGTCTCTTGCTTTTGATAGGTGGGTGGTAGCTCTTACTCATCAATGTACCCTGGACGTAGTGTGGGGGGTAGCAGCTATATGGGCAGCGGTGGGTCTGGATCATACTATTGATGTAAGTCAAACTGTACTTTGTTTCCATCCTTGCCATGATTATTTTCTCTCCTTTTCCTTGTATATCCCCTCCTGATTTTTCTATGTTGGAGACTTTTTCTCCCTAAGAAGAATGCCATTCTTCTTTCCAAGAAGAGTGAATGGTGGAAGTGGAACAATATGGTCACAAGTTATCTGTTTATGGAACAGACTTGATATGAAAAAGAGGCTTCTATAGGATGTGGACAATGTTGGATGCGTGCATTATCTGCCTACAGTTCTGGGAAGGAAACTTTATCAAGATTAACAGCCTCTAAACTTTATTTCTAGAATATGTATTGATGAATGATGGACCATACTGGTTAAGTTGTTAAGACCTTCTTGGTTTTTGATATTTGTAATTCTGGATTGGACCATGTAGGAGAACTCGTGACATATTCAGAAATGAAGAAAGACGTGCCTGATTGTGCATATTCTCATAAGTTGCATTTATGTTTTTTCTCTAGAGAACATTGAAGGTGGTGTTCTTAATTCCTTTTTGTTTTGGAGTATGGCCATCAATTATCGCGTTGGGGGTCAAGTGAAGAAATTGAATATTCTTTTGATGCCTTTTGGACTAATGTAGTCTTGGAACCCCTCTATGGTTTGTAGGACTGACCAACAGTTAGCAAAAGGCACATTTGATTGAATGAGTATAAGGGTGGTCGTTTGATGCAAGAAATATCAAGTTTTTGGATATTCTTTAGTACAGATAAAAGGTTCTGGACTTGTGTTCCATTTATTTTTTGATGCAAGAAATATCAAGTTTTGGATATTCTTTTAGTACAGATAAAAAAGGCTCTGGACTTTGTGTTCCATTTATTTTAAGTGTTAATTGATGGCTTGACTAGAGACTTACTGGAGCTTTTATTAATTATATCTTATGACTTATTGGTATTGCTGGTCTGGAACTAACAGTTCATTGCTTATGGGAAAGGATGGTTTTTTTTTCTCTTAGACTAGGTGGGGTACATGTTCTTGAAGTTTCACTAAAGAGGTTGTTACCACATGGAGAAAACTAAATGTTGTGTTTCTTTCAAGTTGTGTGAGCACTGATGATACGAACATATTCTGACTGTCCCATTGTGACAAATTGGTATTTCACATTGTTTAGAAGTTTTTGGAGTGTGGGGGCCAAAACAAACATGAGTCTGATTTCTTTTTTATCTTTTGGAATTAATTAATTTGGACTTAAGAATAACAGCACACACAATAGAGGACTGTACGTTTGGTAGCGTGGGGACGTATAAAAGGGAATCTGCCTTCACTAACCATCATACATGTGACTTTTTTTGAGTTTACAACCGGTTAGAACAGAATTATTAGTGAAATGGTTTTGTTTGTGAGAGTTGCACCCGAGTTTTGTAGAACTAGTTGGTGTCTTGCTTTTGACTCACTTTTTTTTTTCCTTCTTTTTTTGTTTGGTAATGGTAACTGATTTAATTGTGATTTAAACATGCGAGGGTTCTTTCTACTTTATATTGGTTGCAAAGTGTTTCAGGATATTTGATTTTGTTAGTGTAGTAAGGCACCAGGTGGAGTGGCTTTTTGTCGGTGCAGGACAGAGTGCTTGACTGCTTGTTGATTGCCTTAAAAGGTTCTGCATTTGTGCTTGTTTATCTTTATCTATATTTCTGTATACTCAAAGCTTAACTCATTATCATCTTGTATATATTTATTTATTTGTATATATGTCCCCCCCCCCCCCCCCCC

mRNA sequence

ACAAGAAACCCCTCTTGGCTTATAAATCACGTCCTCGTTATTAGGGTTTCAAATTTCCCACCGCCCTATATATTCTCAATTTCCTATCCTTCGTCTATCGTTTCTACTTTCTAGGTTTCTTCTTTCTTTCGATTTTGAAGCGTTTGTCTAATCGCTCTTTCTTCCACCACCCGATTTTCTTCTCTCAAGAGTTTCTAGGGTTGTTTTATCTTCAACGTTTCAGATCTGTGTAATTGTTGTGATAATTCTGCGAATTTTCTGAGATGCCTCCTAGGACGGTAAAGAGAGGGGCGGCGTCTGCGGGTTCGAAGAGAGGTGGGAGGGTAACCAGAGGGACACCGAAGAAGCAAGATCAGCCGGTGGAAAGGGAGGTTGCGGAAGAGACGGTGAAGGTCGAGGAGGTCTCCGTGGTCGAGGTTGAAACCAAGGAGCTTCGCGAGGAAGTCACGGTGCAGGAAAAAAGCCCTGTTGTAGAAGATAAGCCCGTTATTCAGAATAAACCGGTAGTTGTGGAGGAGAAACAACCGATTGCTATAGACGTTGAGGAGGTCGAACCTTCTCACGAAGTCAGATCGGATTTGAAGTCCATTCCTCCTAAAAAAGAAGAAGAAGTAAAAGATGAAGAATATGGAAAGGACGAGCGCTTGGATCTTGAAGATAATGATCCCGAATCAGAACCTGAGGAGGATGGAGGATTTGAGTATGATGAAAAAGAAATTGAACAAGAGGATGTTCAGGAGGTAGTAGATGGAGAGGGGGAGCCTGAGGACAACGTGGGTGATGAGGAGGGTGATATGGTTGAAGACGATGCTGAGGATGCTCAGGAGGATCTCGAGGTTGAAGAGGATGATCAGCAAGCTGGTGAAGACCATGAGCATGCTGGCATGGTTGATGTCGACGAGGACGAGCATAATGAAGTTGTAAAAGAGAGGCGTAAACGCAAGGAGTTTGAAGTGTTTGTTGGAGGCTTGGACAAGGATGTAAAAGAGGAGGATCTGAAGAAAGTTTTCAGTGCAGTTGGTGAAGTTACTGAAGTCAGGCTAATGATGAACCCCCAGACAAAGAAGAACAAAGGTTTTGCATTCTTACGTTTTGCTAGTGTGGAAGAGGCAAAACGAGCTGTGTCAGAGCTAAAGAACCCAGTGATCAATGGGAAACAATGTGGTGTGACTCCAAGTCAAGACAGTGACACCCTTTTTCTTGGTAACATATGCAAGACATGGAAAAAGGATGCCCTGAAGGAGAAGTTGAAACATTATGGAGTTGATAATGTTGAGGATCTGACATTGGTAGAAGATAGTAATAATGAAGGATCAAATCGTGGATTTGCCTTTTTGGAATTTTCATCTCGTTCAGATGCTATGGATGCCTTCAAGCGTCTTCAAAAAAGGGATGTTGTATTTGGAGTTGATAGGCCTGCCAAAGTGTCGTTTGCTGATTCTTTTATAGATCCTGGTGATGAAATTATGGCACAGGTCAAGACTGTTTTTGTTGATAGTCTCCCTGCCTCATGGGATGAAGAATTTGTTCGAGGACTCCTTAAGAAGTATGGGGAGATTGAAAAAATCGAGCTTGCTCGAAATATGCCATCGGCAAAGAGAAAGGATTTTGGTTTTGTTACATTTGACACACATGATGCTGCAGTTTCATGTGCAAAAAGCATCAACAACTCAGAACTTGGTGAAGGGGACAACAAGGCTAAAGTAAGGGCTAGATTATCTAGACCACTGCAAAGAGGCAAAGGAAAACATGCTAGTCGTGCTGATTATTGGCCTGGACGCACAACTGGACGAGCAGTAAGGGGTTCTTGGGGGAGACCGGCTCCACGAAGTGTTCCTGTTCGAGGAGTAAGAGGTGTTGGCAGCCATCTCCCACCTGTCAGTGTAAAGAGGCCCAGTGGTGTTAGAGATAGACGTCCTGTCATTGCAGTCCCAGCACGAGGAAGAGCAATTGCTCCTGTAGCAAGGTCTTACGACAGGGGGCCTCCTGTTGCTTCTTACTCAAAGAGTAGCTTGAAGAGGGAGTATGGTCGGCGGGAGGAGCTGCATCCATCCAGAAGCCGAATGCTCGTTGATTATTCCTCTAGAGTTGTACCTGAAAGAAATCCATCCTATAGAGATGAATATGCTTCTCGGGCTGCTGCCTTCTCTGATCAACCTCGGAGAGATGCACCCAGGAGAGCTTATGTAGATGATGGATATGGGCGAAGGTTTGAGAGACCCCCTCCTGCAAGCTACCGTGATGTACGTGCACGTGATTATGATGCTCTAATTGGATCAAAGCGCCCATATTCTTCATTGAGTGATGTGCCTCCAGCTTATGCTGATGCTGGTGTTCGTCAATCAAGAAGTCGTTTAGACTATGATTATGGTGCTGGTGCTTCTCAATATGGAGATGCCTATGATGGCAGATTTCTGGTTGGTAGGATTGGCAGATCAAATATTGGAGGATATGATAGTCGAAGTTCCATCTCAGGTTCTTTCAGTAGTGATGTCAGTGGAATGTACTCGTCAAGCTATGGTGGTGACTATATGACTCGTGGTAGCAATGTGGGTGGTAGCTCTTACTCATCAATGTACCCTGGACGTAGTGTGGGGGGTAGCAGCTATATGGGCAGCGGTGGGTCTGGATCATACTATTGATACTTGATATGAAAAAGAGGCTTCTATAGGATGTGGACAATGTTGGATGCGTGCATTATCTGCCTACAGTTCTGGGAAGGAAACTTTATCAAGATTAACAGCCTCTAAACTTTATTTCTAGAATATGTATTGATGAATGATGGACCATACTGGTTAAGTTGTTAAGACCTTCTTGGTTTTTGATATTTGTAATTCTGGATTGGACCATGTAGGAGAACTCGTGACATATTCAGAAATGAAGAAAGACGTGCCTGATTGTGCATATTCTCATAAGTTGCATTTATGTTTTTTCTCTAGAGAACATTGAAGGTGGTGTTCTTAATTCCTTTTTGTTTTGGAGTATGGCCATCAATTATCGCGTTGGGGGTCAAGTGAAGAAATTGAATATTCTTTTGATGCCTTTTGGACTAATGTAGTCTTGGAACCCCTCTATGGTTTGTAGGACTGACCAACAGTTAGCAAAAGGCACATTTGATTGAATGAGTATAAGGGTGGTCGTTTGATGCAAGAAATATCAAGTTTTTGGATATTCTTTAGTACAGATAAAAGGTTCTGGACTTGTGTTCCATTTATTTTTTGATGCAAGAAATATCAAGTTTTGGATATTCTTTTAGTACAGATAAAAAAGGCTCTGGACTTTGTGTTCCATTTATTTTAAGTGTTAATTGATGGCTTGACTAGAGACTTACTGGAGCTTTTATTAATTATATCTTATGACTTATTGGTATTGCTGGTCTGGAACTAACAGTTCATTGCTTATGGGAAAGGATGGTTTTTTTTTCTCTTAGACTAGGTGGGGTACATGTTCTTGAAGTTTCACTAAAGAGGTTGTTACCACATGGAGAAAACTAAATGTTGTGTTTCTTTCAAGTTGTGTGAGCACTGATGATACGAACATATTCTGACTGTCCCATTGTGACAAATTGGTATTTCACATTGTTTAGAAGTTTTTGGAGTGTGGGGGCCAAAACAAACATGAGTCTGATTTCTTTTTTATCTTTTGGAATTAATTAATTTGGACTTAAGAATAACAGCACACACAATAGAGGACTGTACGTTTGGTAGCGTGGGGACGTATAAAAGGGAATCTGCCTTCACTAACCATCATACATGTGACTTTTTTTGAGTTTACAACCGGTTAGAACAGAATTATTAGTGAAATGGTTTTGTTTGTGAGAGTTGCACCCGAGTTTTGTAGAACTAGTTGGTGTCTTGCTTTTGACTCACTTTTTTTTTTCCTTCTTTTTTTGTTTGGTAATGGTAACTGATTTAATTGTGATTTAAACATGCGAGGGTTCTTTCTACTTTATATTGGTTGCAAAGTGTTTCAGGATATTTGATTTTGTTAGTGTAGTAAGGCACCAGGTGGAGTGGCTTTTTGTCGGTGCAGGACAGAGTGCTTGACTGCTTGTTGATTGCCTTAAAAGGTTCTGCATTTGTGCTTGTTTATCTTTATCTATATTTCTGTATACTCAAAGCTTAACTCATTATCATCTTGTATATATTTATTTATTTGTATATATGTCCCCCCCCCCCCCCCCCC

Coding sequence (CDS)

ATGCCTCCTAGGACGGTAAAGAGAGGGGCGGCGTCTGCGGGTTCGAAGAGAGGTGGGAGGGTAACCAGAGGGACACCGAAGAAGCAAGATCAGCCGGTGGAAAGGGAGGTTGCGGAAGAGACGGTGAAGGTCGAGGAGGTCTCCGTGGTCGAGGTTGAAACCAAGGAGCTTCGCGAGGAAGTCACGGTGCAGGAAAAAAGCCCTGTTGTAGAAGATAAGCCCGTTATTCAGAATAAACCGGTAGTTGTGGAGGAGAAACAACCGATTGCTATAGACGTTGAGGAGGTCGAACCTTCTCACGAAGTCAGATCGGATTTGAAGTCCATTCCTCCTAAAAAAGAAGAAGAAGTAAAAGATGAAGAATATGGAAAGGACGAGCGCTTGGATCTTGAAGATAATGATCCCGAATCAGAACCTGAGGAGGATGGAGGATTTGAGTATGATGAAAAAGAAATTGAACAAGAGGATGTTCAGGAGGTAGTAGATGGAGAGGGGGAGCCTGAGGACAACGTGGGTGATGAGGAGGGTGATATGGTTGAAGACGATGCTGAGGATGCTCAGGAGGATCTCGAGGTTGAAGAGGATGATCAGCAAGCTGGTGAAGACCATGAGCATGCTGGCATGGTTGATGTCGACGAGGACGAGCATAATGAAGTTGTAAAAGAGAGGCGTAAACGCAAGGAGTTTGAAGTGTTTGTTGGAGGCTTGGACAAGGATGTAAAAGAGGAGGATCTGAAGAAAGTTTTCAGTGCAGTTGGTGAAGTTACTGAAGTCAGGCTAATGATGAACCCCCAGACAAAGAAGAACAAAGGTTTTGCATTCTTACGTTTTGCTAGTGTGGAAGAGGCAAAACGAGCTGTGTCAGAGCTAAAGAACCCAGTGATCAATGGGAAACAATGTGGTGTGACTCCAAGTCAAGACAGTGACACCCTTTTTCTTGGTAACATATGCAAGACATGGAAAAAGGATGCCCTGAAGGAGAAGTTGAAACATTATGGAGTTGATAATGTTGAGGATCTGACATTGGTAGAAGATAGTAATAATGAAGGATCAAATCGTGGATTTGCCTTTTTGGAATTTTCATCTCGTTCAGATGCTATGGATGCCTTCAAGCGTCTTCAAAAAAGGGATGTTGTATTTGGAGTTGATAGGCCTGCCAAAGTGTCGTTTGCTGATTCTTTTATAGATCCTGGTGATGAAATTATGGCACAGGTCAAGACTGTTTTTGTTGATAGTCTCCCTGCCTCATGGGATGAAGAATTTGTTCGAGGACTCCTTAAGAAGTATGGGGAGATTGAAAAAATCGAGCTTGCTCGAAATATGCCATCGGCAAAGAGAAAGGATTTTGGTTTTGTTACATTTGACACACATGATGCTGCAGTTTCATGTGCAAAAAGCATCAACAACTCAGAACTTGGTGAAGGGGACAACAAGGCTAAAGTAAGGGCTAGATTATCTAGACCACTGCAAAGAGGCAAAGGAAAACATGCTAGTCGTGCTGATTATTGGCCTGGACGCACAACTGGACGAGCAGTAAGGGGTTCTTGGGGGAGACCGGCTCCACGAAGTGTTCCTGTTCGAGGAGTAAGAGGTGTTGGCAGCCATCTCCCACCTGTCAGTGTAAAGAGGCCCAGTGGTGTTAGAGATAGACGTCCTGTCATTGCAGTCCCAGCACGAGGAAGAGCAATTGCTCCTGTAGCAAGGTCTTACGACAGGGGGCCTCCTGTTGCTTCTTACTCAAAGAGTAGCTTGAAGAGGGAGTATGGTCGGCGGGAGGAGCTGCATCCATCCAGAAGCCGAATGCTCGTTGATTATTCCTCTAGAGTTGTACCTGAAAGAAATCCATCCTATAGAGATGAATATGCTTCTCGGGCTGCTGCCTTCTCTGATCAACCTCGGAGAGATGCACCCAGGAGAGCTTATGTAGATGATGGATATGGGCGAAGGTTTGAGAGACCCCCTCCTGCAAGCTACCGTGATGTACGTGCACGTGATTATGATGCTCTAATTGGATCAAAGCGCCCATATTCTTCATTGAGTGATGTGCCTCCAGCTTATGCTGATGCTGGTGTTCGTCAATCAAGAAGTCGTTTAGACTATGATTATGGTGCTGGTGCTTCTCAATATGGAGATGCCTATGATGGCAGATTTCTGGTTGGTAGGATTGGCAGATCAAATATTGGAGGATATGATAGTCGAAGTTCCATCTCAGGTTCTTTCAGTAGTGATGTCAGTGGAATGTACTCGTCAAGCTATGGTGGTGACTATATGACTCGTGGTAGCAATGTGGGTGGTAGCTCTTACTCATCAATGTACCCTGGACGTAGTGTGGGGGGTAGCAGCTATATGGGCAGCGGTGGGTCTGGATCATACTATTGA

Protein sequence

MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVEVETKELREEVTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSDLKSIPPKKEEEVKDEEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMVEDDAEDAQEDLEVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGDNKAKVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVPVRGVRGVGSHLPPVSVKRPSGVRDRRPVIAVPARGRAIAPVARSYDRGPPVASYSKSSLKREYGRREELHPSRSRMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPRRDAPRRAYVDDGYGRRFERPPPASYRDVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGDAYDGRFLVGRIGRSNIGGYDSRSSISGSFSSDVSGMYSSSYGGDYMTRGSNVGGSSYSSMYPGRSVGGSSYMGSGGSGSYY
BLAST of Lsi05G018670 vs. Swiss-Prot
Match: HNRPQ_HUMAN (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens GN=SYNCRIP PE=1 SV=2)

HSP 1 Score: 144.1 bits (362), Expect = 6.8e-33
Identity = 101/307 (32.90%), Postives = 159/307 (51.79%), Query Frame = 1

Query: 230 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSE 289
           E+FVG + +D+ E++L  +F   G + ++RLMM+P T  N+G+AF+ F + E A+ AV  
Sbjct: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222

Query: 290 LKNPVI-NGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNN 349
             N  I +GK  GV  S  ++ LF+G+I K+  K+ + E+      + + D+ L    ++
Sbjct: 223 YNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKV-TEGLTDVILYHQPDD 282

Query: 350 EGSNRGFAFLEFSSRSDAMDAFKRLQKRDV-VFGVDRPAKVSFADSFIDPGDEIMAQVKT 409
           +  NRGF FLE+     A  A +RL    V V+G      V +AD   DP  E+MA+VK 
Sbjct: 283 KKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWG--NVGTVEWADPIEDPDPEVMAKVKV 342

Query: 410 VFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSI 469
           +FV +L  +  EE +     ++G++E+++        K KD+ F+ FD  D AV   + +
Sbjct: 343 LFVRNLANTVTEEILEKAFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAMEEM 402

Query: 470 NNSELGEGDN------KAKVRARLSRPLQRGKGKHASRADYW---------PGRTTGRAV 520
           N  +L EG+N      K   + R  R  QR   K+    DY+         P R  GR  
Sbjct: 403 NGKDL-EGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGG 457

BLAST of Lsi05G018670 vs. Swiss-Prot
Match: HNRPQ_MOUSE (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus GN=Syncrip PE=1 SV=2)

HSP 1 Score: 143.7 bits (361), Expect = 8.8e-33
Identity = 101/307 (32.90%), Postives = 159/307 (51.79%), Query Frame = 1

Query: 230 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSE 289
           E+FVG + +D+ E++L  +F   G + ++RLMM+P T  N+G+AF+ F + E A+ AV  
Sbjct: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222

Query: 290 LKNPVI-NGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNN 349
             N  I +GK  GV  S  ++ LF+G+I K+  K+ + E+      + + D+ L    ++
Sbjct: 223 YNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKV-TEGLTDVILYHQPDD 282

Query: 350 EGSNRGFAFLEFSSRSDAMDAFKRLQKRDV-VFGVDRPAKVSFADSFIDPGDEIMAQVKT 409
           +  NRGF FLE+     A  A +RL    V V+G      V +AD   DP  E+MA+VK 
Sbjct: 283 KKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWG--NVGTVEWADPIEDPDPEVMAKVKV 342

Query: 410 VFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSI 469
           +FV +L  +  EE +     ++G++E+++        K KD+ F+ FD  D AV   + +
Sbjct: 343 LFVRNLANTVTEEILEKSFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAMEEM 402

Query: 470 NNSELGEGDN------KAKVRARLSRPLQRGKGKHASRADYW---------PGRTTGRAV 520
           N  +L EG+N      K   + R  R  QR   K+    DY+         P R  GR  
Sbjct: 403 NGKDL-EGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGG 457

BLAST of Lsi05G018670 vs. Swiss-Prot
Match: HNRPQ_RAT (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 8.8e-33
Identity = 101/307 (32.90%), Postives = 159/307 (51.79%), Query Frame = 1

Query: 230 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSE 289
           E+FVG + +D+ E++L  +F   G + ++RLMM+P T  N+G+AF+ F + E A+ AV  
Sbjct: 73  EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 132

Query: 290 LKNPVI-NGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNN 349
             N  I +GK  GV  S  ++ LF+G+I K+  K+ + E+      + + D+ L    ++
Sbjct: 133 YNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKV-TEGLTDVILYHQPDD 192

Query: 350 EGSNRGFAFLEFSSRSDAMDAFKRLQKRDV-VFGVDRPAKVSFADSFIDPGDEIMAQVKT 409
           +  NRGF FLE+     A  A +RL    V V+G      V +AD   DP  E+MA+VK 
Sbjct: 193 KKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWG--NVGTVEWADPIEDPDPEVMAKVKV 252

Query: 410 VFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSI 469
           +FV +L  +  EE +     ++G++E+++        K KD+ F+ FD  D AV   + +
Sbjct: 253 LFVRNLANTVTEEILEKSFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAMEEM 312

Query: 470 NNSELGEGDN------KAKVRARLSRPLQRGKGKHASRADYW---------PGRTTGRAV 520
           N  +L EG+N      K   + R  R  QR   K+    DY+         P R  GR  
Sbjct: 313 NGKDL-EGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGG 367

BLAST of Lsi05G018670 vs. Swiss-Prot
Match: HNRPR_HUMAN (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens GN=HNRNPR PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.5e-27
Identity = 98/306 (32.03%), Postives = 158/306 (51.63%), Query Frame = 1

Query: 230 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSE 289
           EVFVG + +D+ E++L  +F   G + ++RLMM+P + +N+G+AF+ F   E A+ AV  
Sbjct: 166 EVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKL 225

Query: 290 LKNPVIN-GKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNN 349
             +  I  GK  GV  S  ++ LF+G+I K   K+ + E+      + + D+ L    ++
Sbjct: 226 CDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKV-TEGLVDVILYHQPDD 285

Query: 350 EGSNRGFAFLEFSSRSDAMDAFKRLQKRDV-VFGVDRPAKVSFADSFIDPGDEIMAQVKT 409
           +  NRGF FLE+     A  A +RL    V V+G      V +AD   +P  E+MA+VK 
Sbjct: 286 KKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWG--NVVTVEWADPVEEPDPEVMAKVKV 345

Query: 410 VFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSI 469
           +FV +L  +  EE +     ++G++E+++        K KD+ FV F+   AAV     +
Sbjct: 346 LFVRNLATTVTEEILEKSFSEFGKLERVK--------KLKDYAFVHFEDRGAAVKAMDEM 405

Query: 470 NNSELGEGDNKAKVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVPVR 529
           N  E+ EG+    V A+   P ++ K + A+R      R+T  A    +  P PR  P  
Sbjct: 406 NGKEI-EGEEIEIVLAK--PPDKKRKERQAARQ---ASRST--AYEDYYYHPPPRMPPPI 452

Query: 530 GVRGVG 534
             RG G
Sbjct: 466 RGRGRG 452

BLAST of Lsi05G018670 vs. Swiss-Prot
Match: RBM47_CANLF (RNA-binding protein 47 OS=Canis lupus familiaris GN=RBM47 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.0e-25
Identity = 85/247 (34.41%), Postives = 139/247 (56.28%), Query Frame = 1

Query: 230 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSE 289
           EVFVG + +DV E++L  VF AVG + E+RLMM+    KN+G+AF+ +    EAKRAV E
Sbjct: 74  EVFVGKIPRDVYEDELVPVFEAVGRIYELRLMMD-FDGKNRGYAFVTYCHKGEAKRAVRE 133

Query: 290 LKNPVIN-GKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNN 349
           L N  I  G+  GV  S D+  LF+G I K  K++ + E++     + V D+ +   + +
Sbjct: 134 LNNHEIRPGRLLGVCCSVDNCRLFIGGIPKMKKREEILEEIAKV-TEGVLDVIVYASAAD 193

Query: 350 EGSNRGFAFLEFSS-RSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKT 409
           +  NRGFAF+E+ S R+ AM   K +  R  ++G      V +A+  ID  +++M  VK 
Sbjct: 194 KMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWG--HQIAVDWAEPEIDVDEDVMETVKI 253

Query: 410 VFVDSLPASWDEEFVRGLLKKY--GEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAK 469
           ++V +L     E+ ++    ++  G +E+++        K +D+ FV F + + AV    
Sbjct: 254 LYVRNLMIETTEDTIKKSFGQFNPGCVERVK--------KIRDYAFVHFASREDAVLAMN 308

Query: 470 SINNSEL 473
           S+N +EL
Sbjct: 314 SLNGTEL 308

BLAST of Lsi05G018670 vs. TrEMBL
Match: A0A0A0L6P0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129610 PE=4 SV=1)

HSP 1 Score: 1393.3 bits (3605), Expect = 0.0e+00
Identity = 746/794 (93.95%), Postives = 762/794 (95.97%), Query Frame = 1

Query: 1   MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVEVETKELREE 60
           MPPRTVKRG+ASAG+KRGGR TRGTPKKQDQP EREV EET KVEEVSVVEVETKELREE
Sbjct: 1   MPPRTVKRGSASAGAKRGGRTTRGTPKKQDQPAEREVVEETAKVEEVSVVEVETKELREE 60

Query: 61  VTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSDLK-SIPPKKEEEVKD 120
           V VQEKSPVVEDKPVIQNKPVVVEEKQPIA+DV EVE S EVRSD K S+PPKKEEEVKD
Sbjct: 61  VAVQEKSPVVEDKPVIQNKPVVVEEKQPIAVDVGEVESSREVRSDSKQSVPPKKEEEVKD 120

Query: 121 EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV 180
           EEYGKDERLDLEDNDPESEP+EDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV
Sbjct: 121 EEYGKDERLDLEDNDPESEPDEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV 180

Query: 181 EDDAEDAQEDLEVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFVGGLDKD 240
           E+D EDAQEDLE E+DDQQ GEDHEHAGMVD DEDEH+EVVKERRKRKEFEVFVGGLDKD
Sbjct: 181 EEDVEDAQEDLEGEDDDQQGGEDHEHAGMVDADEDEHHEVVKERRKRKEFEVFVGGLDKD 240

Query: 241 VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNPVINGKQ 300
           VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFA+VEEAKRAVSELKNPVINGKQ
Sbjct: 241 VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKNPVINGKQ 300

Query: 301 CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE 360
           CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE
Sbjct: 301 CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE 360

Query: 361 FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE 420
           FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE
Sbjct: 361 FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE 420

Query: 421 EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGDNKA 480
           EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGDNKA
Sbjct: 421 EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGDNKA 480

Query: 481 KVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVPVRGVRGVGSHLPPV 540
           KVRARLSRPLQRGKGKHASR DYWPGRTTGR VRGSW RPAPRS+P+RGVRGVGSHLPPV
Sbjct: 481 KVRARLSRPLQRGKGKHASRTDYWPGRTTGR-VRGSWTRPAPRSIPIRGVRGVGSHLPPV 540

Query: 541 SVKRPSGVRDRRPVIAVPARGRAIAPVARSYDRGPPVASYSKSSLKREYGRREELHPSRS 600
           SVKRPSGVRDRRPVIAVP RGR +A VARSYDRGPPVASYSKSSLKR+YGRREELHPSRS
Sbjct: 541 SVKRPSGVRDRRPVIAVPPRGRPVAAVARSYDRGPPVASYSKSSLKRDYGRREELHPSRS 600

Query: 601 RMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPRRDAPRRAYVDDGYGRRFERPPPASYR 660
           RMLVDY+SRVVPERNPSYRD+YASRAAAFSD PRRDAPRRAYVDDGY RRFERPPP SYR
Sbjct: 601 RMLVDYASRVVPERNPSYRDDYASRAAAFSDPPRRDAPRRAYVDDGYSRRFERPPPPSYR 660

Query: 661 DVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGDAYDGRFLV 720
           DVRARDYDALIGSKRPYSS+SDVPPAYAD GVRQSRSRLDYDYGAGASQYGDAYD     
Sbjct: 661 DVRARDYDALIGSKRPYSSMSDVPPAYADTGVRQSRSRLDYDYGAGASQYGDAYD----- 720

Query: 721 GRIGRSNIGGYDSRSSISGSFSSDVSGMYSSSYGGDYMTRGSNVGG-SSYSSMYPGRSVG 780
            RIGRSNIGGYDSRSSISGSFSSDV GMYSSSYGGDYMTRGSNVGG SSYSSMYPGRSVG
Sbjct: 721 SRIGRSNIGGYDSRSSISGSFSSDVGGMYSSSYGGDYMTRGSNVGGSSSYSSMYPGRSVG 780

Query: 781 GSSYMGSGGSGSYY 793
           GSSYMGSGGSGSYY
Sbjct: 781 GSSYMGSGGSGSYY 788

BLAST of Lsi05G018670 vs. TrEMBL
Match: W9QJ30_9ROSA (Heterogeneous nuclear ribonucleoprotein Q OS=Morus notabilis GN=L484_008031 PE=4 SV=1)

HSP 1 Score: 972.2 bits (2512), Expect = 3.7e-280
Identity = 563/822 (68.49%), Postives = 649/822 (78.95%), Query Frame = 1

Query: 1   MPPRTVKRGAASAGSKRGGRVTRGTPKKQD-QPVEREVAEETVKVEEVSVVEVETKE--- 60
           MPPRTVKRGA   G +R GRVTRG+ K Q+ QP +  V E+ V VEEV +   E KE   
Sbjct: 1   MPPRTVKRGA---GPRRTGRVTRGSQKAQNHQPPD--VPEDPVTVEEVPIRATEAKEDVK 60

Query: 61  LREEVTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVE-EVEPSHEVRSDLKSIPPKKEE 120
           +  E T++EK P +E+KPV+ N+ +         ++VE + EP+   + D      K +E
Sbjct: 61  VEAEPTMEEKPPAIEEKPVVVNQLIS-------DLNVEAKAEPNGLEKED------KMKE 120

Query: 121 EVKDEEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVD-GEGEPEDNVGDE 180
            V  +EY KDERLDLEDN+PE E EE  G +YDEKEI+QEDVQEV D GE +PE+N+G+E
Sbjct: 121 SV--DEYEKDERLDLEDNEPEYENEEYVGVDYDEKEIDQEDVQEVGDEGEEDPEENLGEE 180

Query: 181 -EGDMVEDDAEDAQEDLEVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFV 240
            EGD      E+  E+LE EE ++ AGEDHEH    D DEDEH+EVVKERRKRKEFEVFV
Sbjct: 181 DEGD------EEELEELEGEEYEEHAGEDHEHVEHADADEDEHHEVVKERRKRKEFEVFV 240

Query: 241 GGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNP 300
           GGLDKD  E DL+KVFSAVGEVTEVRLMMNPQTKKNKGFAFLRF++VE+AKRAV+ELKNP
Sbjct: 241 GGLDKDATEGDLRKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFSTVEQAKRAVTELKNP 300

Query: 301 VINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNR 360
           VI GKQCGVTPSQDSDTLFLGNICKTW K+ALKEKLKHYGV+NVED+TLVEDSNN+G NR
Sbjct: 301 VIKGKQCGVTPSQDSDTLFLGNICKTWSKEALKEKLKHYGVNNVEDVTLVEDSNNDGMNR 360

Query: 361 GFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSL 420
           GFAFLEFSSRS+AMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVD L
Sbjct: 361 GFAFLEFSSRSEAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGL 420

Query: 421 PASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELG 480
           PA+WDE+ VR LLKKYGEI KIELARNMPSAKRKDFGFVTFDTHDAAV+CAKSINN ELG
Sbjct: 421 PATWDEDRVRWLLKKYGEIVKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNVELG 480

Query: 481 EGDNKAKVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVPVRGVRGVG 540
           EG NKAKVRARLSRPLQ+GKG+H +R D+   R +GR V+GSW  P+PRS+P+RG+RG G
Sbjct: 481 EGGNKAKVRARLSRPLQKGKGRHVARGDFRSSRGSGRVVKGSWSHPSPRSLPMRGLRGAG 540

Query: 541 SHLPPVSVKRPSGVRDRRPVIAVPARGRAIAPVARSYDRGPPVASYSKSSLKREYGRREE 600
           S +PP SVKRP+G RDRRPV++VP R R +AP ARSYDR  PV+SY KSSLKREY RR+E
Sbjct: 541 SRIPPPSVKRPAGFRDRRPVMSVPVRARPLAPPARSYDRRAPVSSYPKSSLKREYSRRDE 600

Query: 601 LHPSRSRMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPR---RDAPRRAYVDDGYGRRF 660
           + P RSR + DY SRVV ER PSYRD+Y+SRA+ +SD PR   R + RRAYVDDGYG RF
Sbjct: 601 ILPPRSRAVADYGSRVVHERRPSYRDDYSSRASGYSDPPRSTSRTSARRAYVDDGYGPRF 660

Query: 661 ER----PPPASYRDVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGA 720
           ER    PPP SYR+ RARDYD++ GSKRPYSS+ DVPP YADA VRQSR+RLDY+YG+G 
Sbjct: 661 ERPPPPPPPPSYREGRARDYDSVSGSKRPYSSMDDVPPRYADASVRQSRARLDYEYGSGG 720

Query: 721 SQYGDAYDGRFLVGRIGRSNIGGYDSRSS--ISGSFSS--------------DVSGMYSS 780
           S YGDAY       R+GRSN+G   SR+S    G +SS              D  GMYSS
Sbjct: 721 SHYGDAYG-----DRLGRSNLGYGSSRTSQDSHGLYSSRQGMGYGEGSYGGGDAGGMYSS 780

Query: 781 SYGGDYMTRGSNVGGSSYSSMYPGRSVGGSSYMGSGGSGSYY 793
           SYGG+Y++RG +VGGSSYSSMYPGR +GGSSYMGSGGSGSYY
Sbjct: 781 SYGGEYISRGPDVGGSSYSSMYPGRGMGGSSYMGSGGSGSYY 791

BLAST of Lsi05G018670 vs. TrEMBL
Match: D7SM13_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01160 PE=4 SV=1)

HSP 1 Score: 966.1 bits (2496), Expect = 2.7e-278
Identity = 570/830 (68.67%), Postives = 642/830 (77.35%), Query Frame = 1

Query: 1   MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVEVETKELRE- 60
           MPPR VK+ AA+  +KR  R TRGTPK Q QP   E + E VK EEVSV  VE KE  + 
Sbjct: 1   MPPRAVKKTAAA--TKRTPRATRGTPKVQPQP---EASVEPVKAEEVSVPVVEVKEEVKV 60

Query: 61  ----EVTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSDLKSIPPKKEE 120
               EV V EK+P  E +PV + +P    E +P +    + EP  E  ++  S P KKE+
Sbjct: 61  AEAVEVKVVEKAP--EPEPVPEPEPEPEPEPEPES----KAEPEQESNTNRLS-PVKKED 120

Query: 121 EVKDE-------EYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDG--EGE 180
           E+K+        EY KDERLDLEDN+PE E EE GG +YDEKEIEQED+ +  D   E  
Sbjct: 121 EIKESVDEYEKNEYEKDERLDLEDNEPEYETEEYGGVDYDEKEIEQEDIPDGGDEVEEEN 180

Query: 181 PEDNVGDEE-GDMVEDDAEDAQEDLEVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRK 240
            E +VG+EE GD+ E+  ED  E+LE EEDD+ AGE  EHA MVD +++EH+EV KERRK
Sbjct: 181 EEGDVGEEEDGDVGEEGMEDVPEELEGEEDDEHAGELQEHAEMVDAEDEEHHEVFKERRK 240

Query: 241 RKEFEVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKR 300
           RKEFEVFVGGLDKD  E+DL+KVFS VGEVTEVRLMMNPQTKKNKGFAFLRFA+VE+AKR
Sbjct: 241 RKEFEVFVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKR 300

Query: 301 AVSELKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVED 360
           AV+ELKNPV+NGKQCGVTPSQDSDTLFLGNICKTW K+ALKEKLKHYGV+NVEDLTLVED
Sbjct: 301 AVTELKNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDLTLVED 360

Query: 361 SNNEGSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQV 420
           SNNEG NRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDR AKVSFADSFIDPGDEIMAQV
Sbjct: 361 SNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRTAKVSFADSFIDPGDEIMAQV 420

Query: 421 KTVFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAK 480
           KTVF+D LPASWDE+ VR LLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAV+CAK
Sbjct: 421 KTVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVTCAK 480

Query: 481 SINNSELGEGDNKAKVRARLSRPLQRGKGKHASRADYWPGR-TTGRAVRGSWGRPAPRSV 540
           SINN+ELGEG+NKAKVRARLSRPLQRGKGKH SR D+ PGR    R VRGSW RPA RS 
Sbjct: 481 SINNAELGEGENKAKVRARLSRPLQRGKGKHISRGDFRPGRGGPVRGVRGSWARPALRSF 540

Query: 541 PVRGVRGVGSHLPPVSVKRPSGVRDRRPVIAVPARGRAIAPVARSYDRGPPVASYSKSSL 600
           P RG RG+G  LPP +VKRP G RDRRPV+A+P RGR + P +RSYDR  PV +Y K +L
Sbjct: 541 PGRGARGLGPRLPPAAVKRPIGFRDRRPVMAMPPRGRPLPPPSRSYDRRAPVPAYPKPNL 600

Query: 601 KREYGRREELHPSRSRMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPR---RDAPRRAY 660
           KR+YGRREE+ P RSR  VDY SRV PER PSYRD+YA+R + +SD PR   R A RR Y
Sbjct: 601 KRDYGRREEV-PLRSRPAVDYGSRVAPERRPSYRDDYATRGSGYSDIPRNTSRTAARRTY 660

Query: 661 VDDGYGRRFERPPPASYRDVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYD 720
            DD YG+RFERPPP SYR+ R RDYD++ GSKRPY +L DVPP YADA VRQSR+RLDY+
Sbjct: 661 EDDAYGQRFERPPPPSYREGRPRDYDSIAGSKRPYGALDDVPPRYADASVRQSRARLDYE 720

Query: 721 YGAGASQYGDAYDGRFLVGRIGRSNIGGYDSRSSIS------------------GSF-SS 780
             AGASQYGDAY       R+GRSN+G   SRSS+S                  GSF  S
Sbjct: 721 MSAGASQYGDAYG-----DRLGRSNLGYGGSRSSMSSQDSHGLYSSRQGMGYGGGSFGGS 780

Query: 781 DVSGMYSSSYGGDYMTRGSNVGGSSYSSMYPGRSVGGSSYMGSGGSGSYY 793
           DV GMYSSSYG DYM RG++VGGSSYSS+Y  R VGGSSYMGSGGSGSYY
Sbjct: 781 DVGGMYSSSYGSDYMPRGADVGGSSYSSLYSSRGVGGSSYMGSGGSGSYY 812

BLAST of Lsi05G018670 vs. TrEMBL
Match: V4U933_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018944mg PE=4 SV=1)

HSP 1 Score: 956.8 bits (2472), Expect = 1.6e-275
Identity = 566/819 (69.11%), Postives = 632/819 (77.17%), Query Frame = 1

Query: 1   MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVEVETKELREE 60
           MPPRTVKRGAA  G +R  R TRGT K+Q      EVAEETVKVEEV V E         
Sbjct: 1   MPPRTVKRGAA--GPRRTARATRGTAKQQ-----AEVAEETVKVEEVPVKE--------- 60

Query: 61  VTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSDLKSIPPKKEEEVKD- 120
               E+  VVED     NKPVVVE+           EP  +V   + +   +KE+EVK+ 
Sbjct: 61  ----EEKAVVED----DNKPVVVED-----------EPKSDVNGSVPAT--QKEDEVKES 120

Query: 121 -EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPED-NVGDEE-G 180
            +EY KDERLDL+DN+PE EPEE GG +YD+KE E EDVQEV + E E +D NVG+EE  
Sbjct: 121 VDEYEKDERLDLDDNEPEYEPEEYGGVDYDDKETEHEDVQEVGNEEDEHDDENVGEEEED 180

Query: 181 DMVEDDAEDAQEDL-EVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFVGG 240
           D+ E + ED  E+  + EE+ + AGE+ E   MVD +E +H+E+ +ERRKRKEFEVFVGG
Sbjct: 181 DLAEGEMEDVPEEHGQGEEEVENAGEEAERPEMVDAEEHDHHEMFQERRKRKEFEVFVGG 240

Query: 241 LDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNPVI 300
           LDKDV  +DL+KVFS VGEVTEVRLMMNPQTKKNKGFAFLRFA+VE+A++AV+ELKNPVI
Sbjct: 241 LDKDVVGDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQARQAVTELKNPVI 300

Query: 301 NGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGF 360
           NGKQCGVTPSQDSDTLFLGNICKTW K+ALKEKLKHYGVDNVEDLTLVEDSNNEG NRGF
Sbjct: 301 NGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNVEDLTLVEDSNNEGMNRGF 360

Query: 361 AFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPA 420
           AFLEFSSRSDAMDAFKRLQKRDV+FGVDRPAKVSFADSFIDPGDEIMAQVKTVFVD LPA
Sbjct: 361 AFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGLPA 420

Query: 421 SWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEG 480
           SWDE+ VR LLK YGEI KIELARNMPSAKRKDFGFVTFDTHDAAV+CAKSINN+ELGEG
Sbjct: 421 SWDEDRVRELLKNYGEITKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNAELGEG 480

Query: 481 DNKAKVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVPVRGVRGVGSH 540
           DNKAKVRARLSRPLQRGKGKHASR D+  GR TGRA RGSWG P+PRS+P R  RG+GS 
Sbjct: 481 DNKAKVRARLSRPLQRGKGKHASRGDFRSGRGTGRATRGSWGLPSPRSLPGRSARGIGSR 540

Query: 541 LPPVSVKRPSGVRDRRPVIAVPARGRAI-APVARSYDRGPPVASYSKSSLKREYGRREEL 600
           LPP SVKRP  VRDRRP++++ AR R +  P  RSYDR  PV SY K  LKREYGRR+E+
Sbjct: 541 LPPASVKRPVPVRDRRPIMSMTARARPMPPPPPRSYDRRAPVPSYPKPGLKREYGRRDEV 600

Query: 601 HPSRSRMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPR---RDAPRRAYVDDGYGRRFE 660
            P RSR  VDY SRVVP+R P YRDEY SR + + D PR   R A RR YVDDGY +RFE
Sbjct: 601 PPPRSRAPVDYGSRVVPDRRP-YRDEYTSRGSGYPDMPRSTSRGAARRPYVDDGYAQRFE 660

Query: 661 RPPPASYRDVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGD 720
           RPPP SYR+ RARDY+ + GSKRPYS + DVPP YAD GVR SR+RLDYD G GA QYGD
Sbjct: 661 RPPP-SYREGRARDYETVSGSKRPYSVVDDVPPRYADPGVRHSRARLDYDLGGGAPQYGD 720

Query: 721 AYDGRFLVGRIGRSNIGGYDSRSSIS-----------------GSFS-SDVSGMYSSSYG 780
           AY       R+GRSN+G   SRSSIS                 GS+S  DV GMYSSSYG
Sbjct: 721 AYG-----DRMGRSNLGYGGSRSSISSQDSHGLYSSRQGMGYGGSYSGGDVGGMYSSSYG 775

Query: 781 GDYMTRGSNVGGSSYSSMYPGRSVGGSSYMGSGGSGSYY 793
            DYM RGS+VGGSSYSSMYPGR VGGSSYMGSGGSGSYY
Sbjct: 781 SDYMPRGSDVGGSSYSSMYPGRGVGGSSYMGSGGSGSYY 775

BLAST of Lsi05G018670 vs. TrEMBL
Match: G9I823_CITSI (RNA recognition motif protein 1 OS=Citrus sinensis GN=RRMP1 PE=2 SV=1)

HSP 1 Score: 956.8 bits (2472), Expect = 1.6e-275
Identity = 566/819 (69.11%), Postives = 632/819 (77.17%), Query Frame = 1

Query: 1   MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVEVETKELREE 60
           MPPRTVKRGAA  G +R  R TRGT K+Q      EVAEETVKVEEV V E         
Sbjct: 1   MPPRTVKRGAA--GPRRTARATRGTAKQQ-----AEVAEETVKVEEVPVKE--------- 60

Query: 61  VTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSDLKSIPPKKEEEVKD- 120
               E+  VVED     NKPVVVE+           EP  +V   + +   +KE+EVK+ 
Sbjct: 61  ----EEKAVVED----DNKPVVVED-----------EPKSDVNGSVPAT--QKEDEVKES 120

Query: 121 -EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPED-NVGDEE-G 180
            +EY KDERLDL+DN+PE EPEE GG +YD+KE E EDVQEV + E E +D NVG+EE  
Sbjct: 121 VDEYEKDERLDLDDNEPEYEPEEYGGVDYDDKETEHEDVQEVGNEEDEHDDENVGEEEED 180

Query: 181 DMVEDDAEDAQEDL-EVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFVGG 240
           D+ E + ED  E+  + EE+ + AGE+ E   MVD +E +H+E+ +ERRKRKEFEVFVGG
Sbjct: 181 DLAEGEMEDVPEEHGQGEEEVENAGEEAERPEMVDAEEHDHHEMFQERRKRKEFEVFVGG 240

Query: 241 LDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNPVI 300
           LDKDV  +DL+KVFS VGEVTEVRLMMNPQTKKNKGFAFLRFA+VE+A++AV+ELKNPVI
Sbjct: 241 LDKDVVGDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQARQAVTELKNPVI 300

Query: 301 NGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGF 360
           NGKQCGVTPSQDSDTLFLGNICKTW K+ALKEKLKHYGVDNVEDLTLVEDSNNEG NRGF
Sbjct: 301 NGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNVEDLTLVEDSNNEGMNRGF 360

Query: 361 AFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPA 420
           AFLEFSSRSDAMDAFKRLQKRDV+FGVDRPAKVSFADSFIDPGDEIMAQVKTVFVD LPA
Sbjct: 361 AFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGLPA 420

Query: 421 SWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEG 480
           SWDE+ VR LLK YGEI KIELARNMPSAKRKDFGFVTFDTHDAAV+CAKSINN+ELGEG
Sbjct: 421 SWDEDRVRELLKNYGEITKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNAELGEG 480

Query: 481 DNKAKVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVPVRGVRGVGSH 540
           DNKAKVRARLSRPLQRGKGKHASR D+  GR TGRA RGSWG P+PRS+P R  RG+GS 
Sbjct: 481 DNKAKVRARLSRPLQRGKGKHASRGDFRSGRGTGRATRGSWGLPSPRSLPGRSARGIGSR 540

Query: 541 LPPVSVKRPSGVRDRRPVIAVPARGRAI-APVARSYDRGPPVASYSKSSLKREYGRREEL 600
           LPP SVKRP  VRDRRP++++ AR R +  P  RSYDR  PV SY K  LKREYGRR+E+
Sbjct: 541 LPPASVKRPVPVRDRRPIMSMTARARPMPPPPPRSYDRRAPVPSYPKPGLKREYGRRDEV 600

Query: 601 HPSRSRMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPR---RDAPRRAYVDDGYGRRFE 660
            P RSR  VDY SRVVP+R P YRDEY SR + + D PR   R A RR YVDDGY +RFE
Sbjct: 601 PPPRSRAPVDYGSRVVPDRRP-YRDEYTSRGSGYPDMPRSTSRGAARRPYVDDGYAQRFE 660

Query: 661 RPPPASYRDVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGD 720
           RPPP SYR+ RARDY+ + GSKRPYS + DVPP YAD GVR SR+RLDYD G GA QYGD
Sbjct: 661 RPPP-SYREGRARDYETVSGSKRPYSVVDDVPPRYADPGVRHSRARLDYDLGGGAPQYGD 720

Query: 721 AYDGRFLVGRIGRSNIGGYDSRSSIS-----------------GSFS-SDVSGMYSSSYG 780
           AY       R+GRSN+G   SRSSIS                 GS+S  DV GMYSSSYG
Sbjct: 721 AYG-----DRMGRSNLGYGGSRSSISSQDSHGLYSSRQGMGYGGSYSGGDVGGMYSSSYG 775

Query: 781 GDYMTRGSNVGGSSYSSMYPGRSVGGSSYMGSGGSGSYY 793
            DYM RGS+VGGSSYSSMYPGR VGGSSYMGSGGSGSYY
Sbjct: 781 SDYMPRGSDVGGSSYSSMYPGRGVGGSSYMGSGGSGSYY 775

BLAST of Lsi05G018670 vs. TAIR10
Match: AT2G44710.1 (AT2G44710.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 712.6 bits (1838), Expect = 2.7e-205
Identity = 463/839 (55.18%), Postives = 573/839 (68.30%), Query Frame = 1

Query: 1   MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVE-VETKELRE 60
           MPP+ VKRG A+   +RGGR+TR   K Q+  VE    +E+V + E+S  + +E KE+  
Sbjct: 1   MPPKVVKRGGAA---RRGGRLTRSALKAQNPHVESS-HDESVNIGELSGSDALEAKEVTP 60

Query: 61  EV--TVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSDLKSIPPKKEEEV 120
           EV  TV+E++P+  D P           K   +ID  E   +  V      +P KKE EV
Sbjct: 61  EVDKTVEEENPL--DVP-----------KSSDSIDDSEAAANPHV-----DVPSKKETEV 120

Query: 121 KD--EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEP--EDNVGD 180
           ++  +++GKDERLDL+DN+PE E EE GG E++E+E+ QED  E+V+ EGE   E+   +
Sbjct: 121 EESVDDFGKDERLDLDDNEPEYEAEEYGGEEFEERELGQED-HELVNEEGEELEEEIEVE 180

Query: 181 EEGDMVEDDAEDAQEDLEVEEDDQQ-AGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVF 240
           EE     D+  D  EDL+ E+DD   A E+ +H   VDV+E+EH++V+ ERRKRKEFE+F
Sbjct: 181 EEAGEFADEIGDGAEDLDSEDDDDDHAIEEVKHGETVDVEEEEHHDVLHERRKRKEFEIF 240

Query: 241 VGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKN 300
           VG LDK   EEDLKKVF  VGEVTEVR++ NPQTKK+KG AFLRFA+VE+AKRAV ELK+
Sbjct: 241 VGSLDKGASEEDLKKVFGHVGEVTEVRILKNPQTKKSKGSAFLRFATVEQAKRAVKELKS 300

Query: 301 PVINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSN 360
           P+INGK+CGVT SQD+DTLF+GNICK W  +AL+EKLKHYGV+N++D+TLVEDSNN   N
Sbjct: 301 PMINGKKCGVTASQDNDTLFVGNICKIWTPEALREKLKHYGVENMDDITLVEDSNNVNMN 360

Query: 361 RGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDS 420
           RG+AFLEFSSRSDAMDA KRL K+DV+FGV++PAKVSF DSF+D  DEIMAQVKT+F+D 
Sbjct: 361 RGYAFLEFSSRSDAMDAHKRLVKKDVMFGVEKPAKVSFTDSFLDLEDEIMAQVKTIFIDG 420

Query: 421 LPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSEL 480
           L  SW+EE VR LLK YG++EK+ELARNMPSA+RKDFGFVTFDTH+AAVSCAK INNSEL
Sbjct: 421 LLPSWNEERVRDLLKPYGKLEKVELARNMPSARRKDFGFVTFDTHEAAVSCAKFINNSEL 480

Query: 481 GEGDNKAKVRARLSRPLQR-GKGKHASRADYWPGRTTGRAVRGSWGRPAPRSV-PVRGVR 540
           GEG++KAKVRARLSRPLQ+ GKG+ +SR+D       GR+ R S+ R  PRS+   R  R
Sbjct: 481 GEGEDKAKVRARLSRPLQKAGKGRQSSRSDQRSRHGAGRSGRSSFARLPPRSLASSRSAR 540

Query: 541 GVGSHLPPVSVKRPSGVRDRRP--------------------VIAVPARGRAIAPVARSY 600
           G GS  P  S KR SG R RRP                     +  PAR R + P ARSY
Sbjct: 541 GAGSRAPSSSAKRASGSRGRRPRPPLPPPARARPLPPPARARPMPPPARARPLPPPARSY 600

Query: 601 DRGPPVASYSKSSLKREYGRREELHPSRSRMLVDYSSRVVPERNPSYRDEYASRAAAFSD 660
           DR PPV  Y K+SLKR+Y RR+EL P RSR  V YSSR+ PER+ SYRD+Y  R + +SD
Sbjct: 601 DRRPPVPLYPKASLKRDYDRRDELPPPRSRPAVSYSSRLSPERHLSYRDDYPPRGSGYSD 660

Query: 661 QPR---RDAPRRAYVDDGYGRRFERPPPASYRDVRARDYDALIGSKRPYSSLSDVPPAYA 720
            PR   R   RR +VDD Y  RFERPP  SY + R R Y+ L GSKRPY++L D+PP YA
Sbjct: 661 LPRSSSRSEIRRPFVDDLYSPRFERPP--SYSEGRPRAYEPLPGSKRPYAALDDLPPRYA 720

Query: 721 DAGVRQSRSRLDYDYGAGASQYGDAYDGRFLVGRIG----RSNIGGYDSRSSIS------ 780
           D  VR SR RLDYD   G SQYG++Y  R     +G    R+++  +DSR   S      
Sbjct: 721 DVDVRHSRPRLDYD--VGPSQYGESYGDRIPRSSLGYGSSRNSMSNHDSRGPYSSRQGMD 780

Query: 781 ---GSFSSDVSGMYSS-SYGGDYMTRGSNVGGSSYSSMYPGRSVGGSSYMGSGGSGSYY 793
              GS+S    G   S SYGGD   R    GGSSYSS+Y  R +GGSSY G GG GSYY
Sbjct: 781 YGGGSYSGSDVGGMYSSSYGGDLPRRDG--GGSSYSSIYSSRGLGGSSYSG-GGPGSYY 809

BLAST of Lsi05G018670 vs. TAIR10
Match: AT4G00830.1 (AT4G00830.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 124.4 bits (311), Expect = 3.1e-28
Identity = 131/440 (29.77%), Postives = 221/440 (50.23%), Query Frame = 1

Query: 125 DERLDLED---NDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMVED 184
           D+R+D E+   ++ E E EE+   EY+E+E E +D  +V  G    E+   ++ GD    
Sbjct: 8   DDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDV--GNQNAEEREVEDYGDTKGG 67

Query: 185 DAEDAQEDLEVEEDD----QQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFVGGLD 244
           D ED QE++  ++D+    + A +D +    +D DED               EVF+GGL 
Sbjct: 68  DMEDVQEEIAEDDDNHIDIETADDDEKPPSPID-DEDREKYSHLLSLPPHGSEVFIGGLP 127

Query: 245 KDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNPVING 304
           +DV EEDL+ +   +GE+ EVRLM +  +  +KG+AF+ F + + A++A+ EL +    G
Sbjct: 128 RDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKG 187

Query: 305 KQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAF 364
           K    + S+  + LF+GNI K W +D  ++ ++  G   VE++ L++D  N   NRGFAF
Sbjct: 188 KTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVG-PGVENIELIKDPTNTTRNRGFAF 247

Query: 365 LEFSSRSDAMDAFKRLQKRDVVFGVDRPA-KVSFADSFIDP-GDEIMAQVKTVFVDSLPA 424
           + +   ++A   + R +  D  F ++  A  V++AD    P      AQVK ++V ++P 
Sbjct: 248 VLY--YNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPE 307

Query: 425 SWDEEFVRGLLKKYGEIEKIELARNMPSAK--RKDFGFVTFDTHDAAVSCAKSINNSELG 484
           +   E ++ L +++GE+ KI      P  K  ++DFGFV +    +A+   K     E+ 
Sbjct: 308 NTSTEQLKELFQRHGEVTKIV----TPPGKGGKRDFGFVHYAERSSALKAVKDTERYEV- 367

Query: 485 EGDNKAKVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWG--RPAPRSVPVRGVRG 544
              N   +   L++P Q  +    S   Y    T    V  ++G    AP      G+  
Sbjct: 368 ---NGQPLEVVLAKP-QAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGI 427

Query: 545 VGSHLPPVSVKR---PSGVR 549
            GS   P+   R   P+G++
Sbjct: 428 AGSFSQPMIYGRGAMPTGMQ 432

BLAST of Lsi05G018670 vs. TAIR10
Match: AT3G52660.1 (AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 124.0 bits (310), Expect = 4.1e-28
Identity = 100/350 (28.57%), Postives = 175/350 (50.00%), Query Frame = 1

Query: 125 DERLDLE-DNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMVEDDA 184
           +ER+DL+ DNDPE   EE+  +E    E+E+E+++E+                       
Sbjct: 18  EERVDLDGDNDPEEILEEEVEYE----EVEEEEIEEI----------------------E 77

Query: 185 EDAQEDLEVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFVGGLDKDVKEE 244
           E+ +E++EVEE+     E+ E A   + +E++   V          EV++GG+  D  E 
Sbjct: 78  EEIEEEVEVEEE-----EEEEDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDATEG 137

Query: 245 DLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNPVINGKQCGVT 304
           DLK    ++GEVTEVR+M    +   KG+AF+ F S + A  A+  L N    GK+   +
Sbjct: 138 DLKGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCS 197

Query: 305 PSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLEFSSR 364
            +Q    LFLGN+ + W +  +K+     G   V+ + L ++  N G NRGFAF+E+ + 
Sbjct: 198 TTQAKHRLFLGNVPRNWMESDIKKAANRIG-PGVQIVELPKEPQNMGRNRGFAFIEYYNH 257

Query: 365 SDAMDAFKRLQKRDVVFGVDRPAKVSFADSFI-DPGDEIMAQVKTVFVDSLPASWDEEFV 424
           + A  + +++         + P  VS+A+S     GD   +QVK +++ +LP    +E +
Sbjct: 258 ACAEYSKQKMSNPSFKLDDNAPT-VSWAESRSGGGGDSSASQVKALYIKNLPRDITQERL 317

Query: 425 RGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSEL 473
           + L + +G+I K+ +    P  +   +GFV +    + +   K+    E+
Sbjct: 318 KALFEHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEI 334

BLAST of Lsi05G018670 vs. TAIR10
Match: AT1G49760.1 (AT1G49760.1 poly(A) binding protein 8)

HSP 1 Score: 74.3 bits (181), Expect = 3.7e-13
Identity = 65/290 (22.41%), Postives = 128/290 (44.14%), Query Frame = 1

Query: 231 VFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSEL 290
           ++VG LD  V +  L + F+  G+V  VR+  +  T+++ G+ ++ +A+ ++A RA++EL
Sbjct: 47  LYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNEL 106

Query: 291 KNPVINGKQCGVTPSQDSDTL--------FLGNICKTWKKDALKEKLKHYGVDNVEDLTL 350
               +NG+   V  S    +L        F+ N+ K+    AL E    +G      L+ 
Sbjct: 107 NFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFG----PILSC 166

Query: 351 VEDSNNEGSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFI-----DP 410
               +  G ++G+ F+++ +   A  A  +L       G+    K  +   F+     DP
Sbjct: 167 KVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLN------GMLLNDKQVYVGPFVHKLQRDP 226

Query: 411 GDEIMAQVKTVFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTH 470
             E   +   V+V +L  S  +E +  +  ++G      + R+    K K FGFV F+  
Sbjct: 227 SGE-KVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRD-GEGKSKGFGFVNFENS 286

Query: 471 DAAVSCAKSINNSE-------LGEGDNKAKVRARLSRPLQRGKGKHASRA 501
           D A     ++N          +G+   K++    L +  ++   + A ++
Sbjct: 287 DDAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKS 324

BLAST of Lsi05G018670 vs. TAIR10
Match: AT2G36660.1 (AT2G36660.1 poly(A) binding protein 7)

HSP 1 Score: 68.9 bits (167), Expect = 1.6e-11
Identity = 56/253 (22.13%), Postives = 113/253 (44.66%), Query Frame = 1

Query: 231 VFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSEL 290
           ++VG L   V E  L   F+    +T VRL  +  + ++  + +  F S ++A  A+ + 
Sbjct: 26  LYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKK 85

Query: 291 KNPVINGKQCGVTPS--------QDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTL 350
            N ++NGK   V  S             +F+ N+ ++     L++  K +G      +  
Sbjct: 86  NNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSCKVAT 145

Query: 351 VEDSNNEGSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIM 410
           +ED    G +RG+ F++F     A  A + L    V        K  +   F+   D + 
Sbjct: 146 LED----GKSRGYGFVQFEQEDAAHAAIQTLNSTIVA------DKEIYVGKFMKKTDRVK 205

Query: 411 AQVK--TVFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAA 470
            + K   +++ +L A   E+ +R    ++G+I  + +A++  +   + + FV FD  + A
Sbjct: 206 PEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKD-ENRLCRGYAFVNFDNPEDA 265

Query: 471 VSCAKSINNSELG 474
              A+++N ++ G
Sbjct: 266 RRAAETVNGTKFG 267

BLAST of Lsi05G018670 vs. NCBI nr
Match: gi|659075752|ref|XP_008438311.1| (PREDICTED: nucleolin [Cucumis melo])

HSP 1 Score: 1395.9 bits (3612), Expect = 0.0e+00
Identity = 750/794 (94.46%), Postives = 765/794 (96.35%), Query Frame = 1

Query: 1   MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVEVETKELREE 60
           MPPRTVKRG+ASAG+KRGGR TRGTPKKQDQP EREVAEET KVEEVSVVEVETKELREE
Sbjct: 1   MPPRTVKRGSASAGAKRGGRTTRGTPKKQDQPAEREVAEETAKVEEVSVVEVETKELREE 60

Query: 61  VTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSDLK-SIPPKKEEEVKD 120
           V VQEKSPVVEDKPVIQNKPVVVEEKQPIA+DV EVE SHEVRSD K S+PPKKEEEVKD
Sbjct: 61  VAVQEKSPVVEDKPVIQNKPVVVEEKQPIAVDVGEVESSHEVRSDSKQSVPPKKEEEVKD 120

Query: 121 EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV 180
           EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV
Sbjct: 121 EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV 180

Query: 181 EDDAEDAQEDLEVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFVGGLDKD 240
           E+D EDAQEDLE E+DDQQ GEDHEHAGMVD DEDEH+EVVKERRKRKEFEVFVGGLDKD
Sbjct: 181 EEDVEDAQEDLEGEDDDQQGGEDHEHAGMVDADEDEHHEVVKERRKRKEFEVFVGGLDKD 240

Query: 241 VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNPVINGKQ 300
           VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFA+VEEAKRAVSELKNPVINGKQ
Sbjct: 241 VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKNPVINGKQ 300

Query: 301 CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE 360
           CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE
Sbjct: 301 CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE 360

Query: 361 FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE 420
           FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE
Sbjct: 361 FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE 420

Query: 421 EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGDNKA 480
           EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGD+KA
Sbjct: 421 EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGDSKA 480

Query: 481 KVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVPVRGVRGVGSHLPPV 540
           KVRARLSRPLQRGKGKHASRADYWPGRTTGR VRGSW RPAPRS+P+RGVRGVGSHLPPV
Sbjct: 481 KVRARLSRPLQRGKGKHASRADYWPGRTTGR-VRGSWARPAPRSIPIRGVRGVGSHLPPV 540

Query: 541 SVKRPSGVRDRRPVIAVPARGRAIAPVARSYDRGPPVASYSKSSLKREYGRREELHPSRS 600
           SVKRPSGVRDRRPVIAVP RGR +A VARSYDRGPPVASYSKSSLKREYGRREELHPSRS
Sbjct: 541 SVKRPSGVRDRRPVIAVPPRGRPVAAVARSYDRGPPVASYSKSSLKREYGRREELHPSRS 600

Query: 601 RMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPRRDAPRRAYVDDGYGRRFERPPPASYR 660
           RMLVDY+SRVVPERNPSYRDEYASRAAAFSD PRRDAPRRAYVDDGY RRFERPPP SYR
Sbjct: 601 RMLVDYASRVVPERNPSYRDEYASRAAAFSDPPRRDAPRRAYVDDGYSRRFERPPPPSYR 660

Query: 661 DVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGDAYDGRFLV 720
           DVRARDYDALIGSKRPYSS+SDVPPAYADAGVRQSRSRLDYDYG GASQYGDAYD     
Sbjct: 661 DVRARDYDALIGSKRPYSSMSDVPPAYADAGVRQSRSRLDYDYGTGASQYGDAYD----- 720

Query: 721 GRIGRSNIGGYDSRSSISGSFSSDVSGMYSSSYGGDYMTRGSNVGG-SSYSSMYPGRSVG 780
            RIGRSNIGGYDSRSSISGSFSSDV GMYSSSYGG+YMTRGSNVGG SSYSSMYPGRSVG
Sbjct: 721 SRIGRSNIGGYDSRSSISGSFSSDV-GMYSSSYGGEYMTRGSNVGGSSSYSSMYPGRSVG 780

Query: 781 GSSYMGSGGSGSYY 793
           GSSYMGSGGSGSYY
Sbjct: 781 GSSYMGSGGSGSYY 787

BLAST of Lsi05G018670 vs. NCBI nr
Match: gi|449432380|ref|XP_004133977.1| (PREDICTED: nucleolin [Cucumis sativus])

HSP 1 Score: 1393.3 bits (3605), Expect = 0.0e+00
Identity = 746/794 (93.95%), Postives = 762/794 (95.97%), Query Frame = 1

Query: 1   MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVEVETKELREE 60
           MPPRTVKRG+ASAG+KRGGR TRGTPKKQDQP EREV EET KVEEVSVVEVETKELREE
Sbjct: 1   MPPRTVKRGSASAGAKRGGRTTRGTPKKQDQPAEREVVEETAKVEEVSVVEVETKELREE 60

Query: 61  VTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSDLK-SIPPKKEEEVKD 120
           V VQEKSPVVEDKPVIQNKPVVVEEKQPIA+DV EVE S EVRSD K S+PPKKEEEVKD
Sbjct: 61  VAVQEKSPVVEDKPVIQNKPVVVEEKQPIAVDVGEVESSREVRSDSKQSVPPKKEEEVKD 120

Query: 121 EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV 180
           EEYGKDERLDLEDNDPESEP+EDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV
Sbjct: 121 EEYGKDERLDLEDNDPESEPDEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV 180

Query: 181 EDDAEDAQEDLEVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFVGGLDKD 240
           E+D EDAQEDLE E+DDQQ GEDHEHAGMVD DEDEH+EVVKERRKRKEFEVFVGGLDKD
Sbjct: 181 EEDVEDAQEDLEGEDDDQQGGEDHEHAGMVDADEDEHHEVVKERRKRKEFEVFVGGLDKD 240

Query: 241 VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNPVINGKQ 300
           VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFA+VEEAKRAVSELKNPVINGKQ
Sbjct: 241 VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKNPVINGKQ 300

Query: 301 CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE 360
           CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE
Sbjct: 301 CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE 360

Query: 361 FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE 420
           FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE
Sbjct: 361 FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE 420

Query: 421 EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGDNKA 480
           EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGDNKA
Sbjct: 421 EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGDNKA 480

Query: 481 KVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVPVRGVRGVGSHLPPV 540
           KVRARLSRPLQRGKGKHASR DYWPGRTTGR VRGSW RPAPRS+P+RGVRGVGSHLPPV
Sbjct: 481 KVRARLSRPLQRGKGKHASRTDYWPGRTTGR-VRGSWTRPAPRSIPIRGVRGVGSHLPPV 540

Query: 541 SVKRPSGVRDRRPVIAVPARGRAIAPVARSYDRGPPVASYSKSSLKREYGRREELHPSRS 600
           SVKRPSGVRDRRPVIAVP RGR +A VARSYDRGPPVASYSKSSLKR+YGRREELHPSRS
Sbjct: 541 SVKRPSGVRDRRPVIAVPPRGRPVAAVARSYDRGPPVASYSKSSLKRDYGRREELHPSRS 600

Query: 601 RMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPRRDAPRRAYVDDGYGRRFERPPPASYR 660
           RMLVDY+SRVVPERNPSYRD+YASRAAAFSD PRRDAPRRAYVDDGY RRFERPPP SYR
Sbjct: 601 RMLVDYASRVVPERNPSYRDDYASRAAAFSDPPRRDAPRRAYVDDGYSRRFERPPPPSYR 660

Query: 661 DVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGDAYDGRFLV 720
           DVRARDYDALIGSKRPYSS+SDVPPAYAD GVRQSRSRLDYDYGAGASQYGDAYD     
Sbjct: 661 DVRARDYDALIGSKRPYSSMSDVPPAYADTGVRQSRSRLDYDYGAGASQYGDAYD----- 720

Query: 721 GRIGRSNIGGYDSRSSISGSFSSDVSGMYSSSYGGDYMTRGSNVGG-SSYSSMYPGRSVG 780
            RIGRSNIGGYDSRSSISGSFSSDV GMYSSSYGGDYMTRGSNVGG SSYSSMYPGRSVG
Sbjct: 721 SRIGRSNIGGYDSRSSISGSFSSDVGGMYSSSYGGDYMTRGSNVGGSSSYSSMYPGRSVG 780

Query: 781 GSSYMGSGGSGSYY 793
           GSSYMGSGGSGSYY
Sbjct: 781 GSSYMGSGGSGSYY 788

BLAST of Lsi05G018670 vs. NCBI nr
Match: gi|1009170386|ref|XP_015866171.1| (PREDICTED: nucleolin [Ziziphus jujuba])

HSP 1 Score: 984.9 bits (2545), Expect = 7.9e-284
Identity = 568/824 (68.93%), Postives = 655/824 (79.49%), Query Frame = 1

Query: 1   MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVEVETKELREE 60
           MPPRT KRGAASAG++R  R TRG  K Q+Q    E  EE VK EEVSV  VE KE   E
Sbjct: 1   MPPRTAKRGAASAGTRRTPRATRGAAKSQNQQPP-ETHEEPVKGEEVSVPVVEAKE---E 60

Query: 61  VTVQEKSPVVEDKPVI---QNKPVVVEEKQPIAIDVEEVE-PSHEVRSDLKSIPPKKEEE 120
           V +++K P+ E+KPV+   + +PVV  EK  + +D ++      E +SD   +  KKE+ 
Sbjct: 61  VKIEQK-PIFEEKPVVVVAEERPVV--EKMTVTVDHQQASYHKEEAKSDPNGL--KKEDN 120

Query: 121 VKD--EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDE 180
           +K+  +EY KDERLDLEDN+PE E EE  G +YD+KEI+Q++  E+VD   E EDNVG+E
Sbjct: 121 MKESVDEYEKDERLDLEDNEPEYEVEEYSGVDYDDKEIDQDEDHEIVDEGDEHEDNVGEE 180

Query: 181 -EGDMVEDDAEDAQEDLEVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFV 240
            EGDM E++ ED  E+LE EE ++   E+ EH   VD +ED+H+E+VKERRKRKEFEVFV
Sbjct: 181 DEGDMAEEELEDVHEELEGEEYEEHVVEEREHVETVDGEEDDHHELVKERRKRKEFEVFV 240

Query: 241 GGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNP 300
           GGLDKD  E+DL+KVF+AVGEVTEVRLMMNPQTKKNKGFAFLRFA VE+AKRAV+ELKNP
Sbjct: 241 GGLDKDATEDDLRKVFAAVGEVTEVRLMMNPQTKKNKGFAFLRFAKVEQAKRAVTELKNP 300

Query: 301 VINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNR 360
           VINGKQCGVTPSQDSDTLFLGNI KTWKK+ALKE+LK+YGVDNVEDLTLVEDSNNEG NR
Sbjct: 301 VINGKQCGVTPSQDSDTLFLGNISKTWKKEALKERLKYYGVDNVEDLTLVEDSNNEGMNR 360

Query: 361 GFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSL 420
           GFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVD L
Sbjct: 361 GFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGL 420

Query: 421 PASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELG 480
           PASWDE+ V+ +LKKYGEIEKIELARNMPSAKRKDFGF+TFD+HDAAV+CAKSINN+ELG
Sbjct: 421 PASWDEDRVKDILKKYGEIEKIELARNMPSAKRKDFGFITFDSHDAAVTCAKSINNAELG 480

Query: 481 EGDNKAKVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAP-RSVPVRGVRGV 540
           EGD+KAKVRARLSRPLQRGKGKH  R D+       RAVRGSWGRPAP RS+P+RGVRGV
Sbjct: 481 EGDHKAKVRARLSRPLQRGKGKHVGRGDFRSVHGAARAVRGSWGRPAPPRSLPMRGVRGV 540

Query: 541 GSHLPPVSVKRPSGVRDRRPVIAVPARGRAIAPVARSYDRGPPVASYSKSSLKREYGRRE 600
           GS LPP S+KRP G+RDRRPV+++P+RGR +AP  RSYDR  PV SY+KSSLKREY RR+
Sbjct: 541 GSRLPPPSMKRPVGLRDRRPVMSMPSRGRPLAPPPRSYDRRAPVPSYTKSSLKREYSRRD 600

Query: 601 ELHPSRSRMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPR---RDAPRRAYVDDGYGRR 660
           EL P RSR+  DY SR+VPER  SYRD+Y+SR   +SD PR   R A RRAYVDD YG+R
Sbjct: 601 ELPPPRSRVPADYGSRLVPERRTSYRDDYSSRGPGYSDPPRTTSRTATRRAYVDDAYGQR 660

Query: 661 FERPPPA--SYRDVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGAS 720
           FERPPP   SYR+ RARDYD++ GSKRPYSSL DVPP YADA +RQSR RLDY+YG+ AS
Sbjct: 661 FERPPPPPPSYREGRARDYDSISGSKRPYSSLDDVPPRYADASIRQSRPRLDYEYGSSAS 720

Query: 721 QYGDAYDGRFLVGRIGRSNIGGYDSRSSIS------------------GSFS-SDVSGMY 780
           QYGDAY  R     +GR N+G Y S S  S                  GS+S SDV GMY
Sbjct: 721 QYGDAYGDR-----LGRPNLG-YSSSSRTSQDSHGLYSSSRQGMSYGGGSYSGSDVGGMY 780

Query: 781 SSSYGGDYMTRGSNVGGSSYSSMYPGRSVGGSSYMGSGGSGSYY 793
           SSSYGG+Y++RGS+VGGSSY+SMY  R VGGS YMGSGGSGSYY
Sbjct: 781 SSSYGGEYISRGSDVGGSSYTSMYSSRGVGGSGYMGSGGSGSYY 809

BLAST of Lsi05G018670 vs. NCBI nr
Match: gi|645253058|ref|XP_008232407.1| (PREDICTED: nucleolin [Prunus mume])

HSP 1 Score: 979.5 bits (2531), Expect = 3.3e-282
Identity = 563/829 (67.91%), Postives = 653/829 (78.77%), Query Frame = 1

Query: 1   MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVEVETKELREE 60
           MPPR VKRGAA+AG+KR  RVTRGTPK Q Q        +    ++V VVE +     EE
Sbjct: 1   MPPRMVKRGAAAAGTKRTTRVTRGTPKAQSQA-------QAEAPDDVPVVEAKEDLKVEE 60

Query: 61  VTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSDLKSIPPKKEEEVKD- 120
           V   ++ P+V + PV++ KP V++  QP   ++E+     + +S+L  +  KK+++VK+ 
Sbjct: 61  V---KERPIVAESPVVEEKPTVID--QPGLSEIED-----DAKSELNGL--KKQDKVKES 120

Query: 121 -EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVD-GEGEPEDNVGDEEGD 180
            ++Y KDERL+LEDN+ E EPEEDGG +YDEKE+EQEDVQEV D G+ EP +N+G+EEGD
Sbjct: 121 MDDYEKDERLELEDNEAEYEPEEDGGVDYDEKEMEQEDVQEVEDEGDEEPLENLGEEEGD 180

Query: 181 MVEDDAEDAQEDLEVEEDDQQAGEDHEH--------AGMVDVDEDEHNEVVKERRKRKEF 240
           M E++ ED  E+LE EE ++ AGE+HEH        A  VD +E+EH+EVVKERRKRKEF
Sbjct: 181 MAEEELEDPNEELEGEEYEEHAGEEHEHEHGHEHEHAETVD-EEEEHHEVVKERRKRKEF 240

Query: 241 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSE 300
           EVFVGGLDKD  E DLKK F+ VGEVTEVRLMMNPQTKKNKGFAFLRFA+VE+AKRAV+E
Sbjct: 241 EVFVGGLDKDASETDLKKAFAVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRAVTE 300

Query: 301 LKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNE 360
           LK+PVINGKQCGVTPSQDSDTLFLGNI KTW KDAL+EKLKHYGVDNVEDLTLVED+NN 
Sbjct: 301 LKHPVINGKQCGVTPSQDSDTLFLGNISKTWTKDALREKLKHYGVDNVEDLTLVEDTNNV 360

Query: 361 GSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVF 420
           G NRGFAFLEFSSRSDAMDAFKRLQKRD+VFGVDRPAKVSFADSFIDPGDEIMAQVKTVF
Sbjct: 361 GMNRGFAFLEFSSRSDAMDAFKRLQKRDIVFGVDRPAKVSFADSFIDPGDEIMAQVKTVF 420

Query: 421 VDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINN 480
           VD LPASWDE+ V+ LLKKYGE+EKIELARNMPSAKRKDFGFVTFDTHDAAV+CAKSINN
Sbjct: 421 VDGLPASWDEDHVQELLKKYGEVEKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINN 480

Query: 481 SELGEGDNKAKVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVP-VRG 540
           +ELGEGDNKAKVRARLSRPLQRGKGKH  R DY P R  GR VRGSWGRP PRS+P +RG
Sbjct: 481 AELGEGDNKAKVRARLSRPLQRGKGKHVGRGDYRPSRAVGRVVRGSWGRPTPRSLPPLRG 540

Query: 541 VRGVGSHLPPVSVKRPSGVRDRRPVIA-VPARGRAIAPVARSYDRGPPVASYSKSSLKRE 600
           +RGVGS +PP SVKRP G+R+RRP ++  PARGR + P ARSYDR PPV +Y KSS KRE
Sbjct: 541 LRGVGSRIPPASVKRPVGLRERRPAMSPYPARGRPLPPPARSYDRRPPVPAYPKSSFKRE 600

Query: 601 YGRREELHPSRSRMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPR---RDAPRRAYVDD 660
           YGRR+E+ P RSR+  DY SR VPER  SYRD+Y  R   +SD PR   R   RRAYVD+
Sbjct: 601 YGRRDEVPPPRSRVAADYGSRAVPERRQSYRDDYTPRGPGYSDPPRSTSRTGGRRAYVDE 660

Query: 661 GYGRRFERPPPAS-----YRDVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLD 720
           GYG+R+ER PP S     YR+ RARDYD++ GSKRPYS+L DVPP YAD G+RQSR+RLD
Sbjct: 661 GYGQRYERHPPPSHPPPSYREGRARDYDSISGSKRPYSALDDVPPRYADGGIRQSRARLD 720

Query: 721 YDYGAGASQYGDAYDGRFLVGRIGRSNIGGYDSRSSIS--GSFSS--------------D 780
           Y+Y +G SQYGDAY  R     +GRS++G   SR+S    G +SS              D
Sbjct: 721 YEYASG-SQYGDAYSDR-----MGRSSLGYGSSRTSQDSHGLYSSRQGMGYGGGSYGGND 780

Query: 781 VSGMYSSSYGGDYMTRGSNVGGSSYSSMYPGRSVGGSSYMGSGGSGSYY 793
           V GMYSSSYGGDYM+RGS+VGGSSYSSMY GR VGGSSYMGSGGSGSYY
Sbjct: 781 VGGMYSSSYGGDYMSRGSDVGGSSYSSMYSGRGVGGSSYMGSGGSGSYY 803

BLAST of Lsi05G018670 vs. NCBI nr
Match: gi|703074295|ref|XP_010089781.1| (Heterogeneous nuclear ribonucleoprotein Q [Morus notabilis])

HSP 1 Score: 972.2 bits (2512), Expect = 5.3e-280
Identity = 563/822 (68.49%), Postives = 649/822 (78.95%), Query Frame = 1

Query: 1   MPPRTVKRGAASAGSKRGGRVTRGTPKKQD-QPVEREVAEETVKVEEVSVVEVETKE--- 60
           MPPRTVKRGA   G +R GRVTRG+ K Q+ QP +  V E+ V VEEV +   E KE   
Sbjct: 1   MPPRTVKRGA---GPRRTGRVTRGSQKAQNHQPPD--VPEDPVTVEEVPIRATEAKEDVK 60

Query: 61  LREEVTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVE-EVEPSHEVRSDLKSIPPKKEE 120
           +  E T++EK P +E+KPV+ N+ +         ++VE + EP+   + D      K +E
Sbjct: 61  VEAEPTMEEKPPAIEEKPVVVNQLIS-------DLNVEAKAEPNGLEKED------KMKE 120

Query: 121 EVKDEEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVD-GEGEPEDNVGDE 180
            V  +EY KDERLDLEDN+PE E EE  G +YDEKEI+QEDVQEV D GE +PE+N+G+E
Sbjct: 121 SV--DEYEKDERLDLEDNEPEYENEEYVGVDYDEKEIDQEDVQEVGDEGEEDPEENLGEE 180

Query: 181 -EGDMVEDDAEDAQEDLEVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFV 240
            EGD      E+  E+LE EE ++ AGEDHEH    D DEDEH+EVVKERRKRKEFEVFV
Sbjct: 181 DEGD------EEELEELEGEEYEEHAGEDHEHVEHADADEDEHHEVVKERRKRKEFEVFV 240

Query: 241 GGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNP 300
           GGLDKD  E DL+KVFSAVGEVTEVRLMMNPQTKKNKGFAFLRF++VE+AKRAV+ELKNP
Sbjct: 241 GGLDKDATEGDLRKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFSTVEQAKRAVTELKNP 300

Query: 301 VINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNR 360
           VI GKQCGVTPSQDSDTLFLGNICKTW K+ALKEKLKHYGV+NVED+TLVEDSNN+G NR
Sbjct: 301 VIKGKQCGVTPSQDSDTLFLGNICKTWSKEALKEKLKHYGVNNVEDVTLVEDSNNDGMNR 360

Query: 361 GFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSL 420
           GFAFLEFSSRS+AMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVD L
Sbjct: 361 GFAFLEFSSRSEAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGL 420

Query: 421 PASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELG 480
           PA+WDE+ VR LLKKYGEI KIELARNMPSAKRKDFGFVTFDTHDAAV+CAKSINN ELG
Sbjct: 421 PATWDEDRVRWLLKKYGEIVKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNVELG 480

Query: 481 EGDNKAKVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVPVRGVRGVG 540
           EG NKAKVRARLSRPLQ+GKG+H +R D+   R +GR V+GSW  P+PRS+P+RG+RG G
Sbjct: 481 EGGNKAKVRARLSRPLQKGKGRHVARGDFRSSRGSGRVVKGSWSHPSPRSLPMRGLRGAG 540

Query: 541 SHLPPVSVKRPSGVRDRRPVIAVPARGRAIAPVARSYDRGPPVASYSKSSLKREYGRREE 600
           S +PP SVKRP+G RDRRPV++VP R R +AP ARSYDR  PV+SY KSSLKREY RR+E
Sbjct: 541 SRIPPPSVKRPAGFRDRRPVMSVPVRARPLAPPARSYDRRAPVSSYPKSSLKREYSRRDE 600

Query: 601 LHPSRSRMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPR---RDAPRRAYVDDGYGRRF 660
           + P RSR + DY SRVV ER PSYRD+Y+SRA+ +SD PR   R + RRAYVDDGYG RF
Sbjct: 601 ILPPRSRAVADYGSRVVHERRPSYRDDYSSRASGYSDPPRSTSRTSARRAYVDDGYGPRF 660

Query: 661 ER----PPPASYRDVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGA 720
           ER    PPP SYR+ RARDYD++ GSKRPYSS+ DVPP YADA VRQSR+RLDY+YG+G 
Sbjct: 661 ERPPPPPPPPSYREGRARDYDSVSGSKRPYSSMDDVPPRYADASVRQSRARLDYEYGSGG 720

Query: 721 SQYGDAYDGRFLVGRIGRSNIGGYDSRSS--ISGSFSS--------------DVSGMYSS 780
           S YGDAY       R+GRSN+G   SR+S    G +SS              D  GMYSS
Sbjct: 721 SHYGDAYG-----DRLGRSNLGYGSSRTSQDSHGLYSSRQGMGYGEGSYGGGDAGGMYSS 780

Query: 781 SYGGDYMTRGSNVGGSSYSSMYPGRSVGGSSYMGSGGSGSYY 793
           SYGG+Y++RG +VGGSSYSSMYPGR +GGSSYMGSGGSGSYY
Sbjct: 781 SYGGEYISRGPDVGGSSYSSMYPGRGMGGSSYMGSGGSGSYY 791

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
HNRPQ_HUMAN6.8e-3332.90Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens GN=SYNCRIP PE=1 SV=2[more]
HNRPQ_MOUSE8.8e-3332.90Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus GN=Syncrip PE=1 SV=2[more]
HNRPQ_RAT8.8e-3332.90Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 S... [more]
HNRPR_HUMAN1.5e-2732.03Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens GN=HNRNPR PE=1 SV=1[more]
RBM47_CANLF4.0e-2534.41RNA-binding protein 47 OS=Canis lupus familiaris GN=RBM47 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L6P0_CUCSA0.0e+0093.95Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129610 PE=4 SV=1[more]
W9QJ30_9ROSA3.7e-28068.49Heterogeneous nuclear ribonucleoprotein Q OS=Morus notabilis GN=L484_008031 PE=4... [more]
D7SM13_VITVI2.7e-27868.67Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01160 PE=4 SV=... [more]
V4U933_9ROSI1.6e-27569.11Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018944mg PE=4 SV=1[more]
G9I823_CITSI1.6e-27569.11RNA recognition motif protein 1 OS=Citrus sinensis GN=RRMP1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT2G44710.12.7e-20555.18 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT4G00830.13.1e-2829.77 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT3G52660.14.1e-2828.57 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT1G49760.13.7e-1322.41 poly(A) binding protein 8[more]
AT2G36660.11.6e-1122.13 poly(A) binding protein 7[more]
Match NameE-valueIdentityDescription
gi|659075752|ref|XP_008438311.1|0.0e+0094.46PREDICTED: nucleolin [Cucumis melo][more]
gi|449432380|ref|XP_004133977.1|0.0e+0093.95PREDICTED: nucleolin [Cucumis sativus][more]
gi|1009170386|ref|XP_015866171.1|7.9e-28468.93PREDICTED: nucleolin [Ziziphus jujuba][more]
gi|645253058|ref|XP_008232407.1|3.3e-28267.91PREDICTED: nucleolin [Prunus mume][more]
gi|703074295|ref|XP_010089781.1|5.3e-28068.49Heterogeneous nuclear ribonucleoprotein Q [Morus notabilis][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G018670.1Lsi05G018670.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 311..377
score: 4.0E-8coord: 408..473
score: 1.1E-10coord: 231..299
score: 2.4
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 230..303
score: 2.7E-24coord: 407..482
score: 4.5E-13coord: 310..389
score: 6.
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 406..488
score: 14.505coord: 229..307
score: 18.393coord: 309..393
score: 13
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 232..392
score: 7.8E-35coord: 404..491
score: 7.9
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 230..374
score: 6.02E-34coord: 401..510
score: 2.55
NoneNo IPR availableunknownCoilCoilcoord: 176..196
scor
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 180..198
score: 1.1E-155coord: 647..703
score: 1.1E-155coord: 226..354
score: 1.1E-155coord: 737..787
score: 1.1E-155coord: 405..492
score: 1.1E
NoneNo IPR availablePANTHERPTHR24012:SF493RNA-BINDING PROTEIN 28coord: 737..787
score: 1.1E-155coord: 647..703
score: 1.1E-155coord: 226..354
score: 1.1E-155coord: 405..492
score: 1.1E-155coord: 180..198
score: 1.1E

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi05G018670CmaCh14G019160Cucurbita maxima (Rimu)cmalsiB245
Lsi05G018670Cp4.1LG03g17840Cucurbita pepo (Zucchini)cpelsiB506
Lsi05G018670Carg06311Silver-seed gourdcarlsiB878
The following gene(s) are paralogous to this gene:

None