BLAST of Lsi05G018670 vs. Swiss-Prot
Match:
HNRPQ_HUMAN (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens GN=SYNCRIP PE=1 SV=2)
HSP 1 Score: 144.1 bits (362), Expect = 6.8e-33
Identity = 101/307 (32.90%), Postives = 159/307 (51.79%), Query Frame = 1
Query: 230 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSE 289
E+FVG + +D+ E++L +F G + ++RLMM+P T N+G+AF+ F + E A+ AV
Sbjct: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222
Query: 290 LKNPVI-NGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNN 349
N I +GK GV S ++ LF+G+I K+ K+ + E+ + + D+ L ++
Sbjct: 223 YNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKV-TEGLTDVILYHQPDD 282
Query: 350 EGSNRGFAFLEFSSRSDAMDAFKRLQKRDV-VFGVDRPAKVSFADSFIDPGDEIMAQVKT 409
+ NRGF FLE+ A A +RL V V+G V +AD DP E+MA+VK
Sbjct: 283 KKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWG--NVGTVEWADPIEDPDPEVMAKVKV 342
Query: 410 VFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSI 469
+FV +L + EE + ++G++E+++ K KD+ F+ FD D AV + +
Sbjct: 343 LFVRNLANTVTEEILEKAFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAMEEM 402
Query: 470 NNSELGEGDN------KAKVRARLSRPLQRGKGKHASRADYW---------PGRTTGRAV 520
N +L EG+N K + R R QR K+ DY+ P R GR
Sbjct: 403 NGKDL-EGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGG 457
BLAST of Lsi05G018670 vs. Swiss-Prot
Match:
HNRPQ_MOUSE (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus GN=Syncrip PE=1 SV=2)
HSP 1 Score: 143.7 bits (361), Expect = 8.8e-33
Identity = 101/307 (32.90%), Postives = 159/307 (51.79%), Query Frame = 1
Query: 230 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSE 289
E+FVG + +D+ E++L +F G + ++RLMM+P T N+G+AF+ F + E A+ AV
Sbjct: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222
Query: 290 LKNPVI-NGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNN 349
N I +GK GV S ++ LF+G+I K+ K+ + E+ + + D+ L ++
Sbjct: 223 YNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKV-TEGLTDVILYHQPDD 282
Query: 350 EGSNRGFAFLEFSSRSDAMDAFKRLQKRDV-VFGVDRPAKVSFADSFIDPGDEIMAQVKT 409
+ NRGF FLE+ A A +RL V V+G V +AD DP E+MA+VK
Sbjct: 283 KKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWG--NVGTVEWADPIEDPDPEVMAKVKV 342
Query: 410 VFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSI 469
+FV +L + EE + ++G++E+++ K KD+ F+ FD D AV + +
Sbjct: 343 LFVRNLANTVTEEILEKSFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAMEEM 402
Query: 470 NNSELGEGDN------KAKVRARLSRPLQRGKGKHASRADYW---------PGRTTGRAV 520
N +L EG+N K + R R QR K+ DY+ P R GR
Sbjct: 403 NGKDL-EGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGG 457
BLAST of Lsi05G018670 vs. Swiss-Prot
Match:
HNRPQ_RAT (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 SV=1)
HSP 1 Score: 143.7 bits (361), Expect = 8.8e-33
Identity = 101/307 (32.90%), Postives = 159/307 (51.79%), Query Frame = 1
Query: 230 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSE 289
E+FVG + +D+ E++L +F G + ++RLMM+P T N+G+AF+ F + E A+ AV
Sbjct: 73 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 132
Query: 290 LKNPVI-NGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNN 349
N I +GK GV S ++ LF+G+I K+ K+ + E+ + + D+ L ++
Sbjct: 133 YNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKV-TEGLTDVILYHQPDD 192
Query: 350 EGSNRGFAFLEFSSRSDAMDAFKRLQKRDV-VFGVDRPAKVSFADSFIDPGDEIMAQVKT 409
+ NRGF FLE+ A A +RL V V+G V +AD DP E+MA+VK
Sbjct: 193 KKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWG--NVGTVEWADPIEDPDPEVMAKVKV 252
Query: 410 VFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSI 469
+FV +L + EE + ++G++E+++ K KD+ F+ FD D AV + +
Sbjct: 253 LFVRNLANTVTEEILEKSFSQFGKLERVK--------KLKDYAFIHFDERDGAVKAMEEM 312
Query: 470 NNSELGEGDN------KAKVRARLSRPLQRGKGKHASRADYW---------PGRTTGRAV 520
N +L EG+N K + R R QR K+ DY+ P R GR
Sbjct: 313 NGKDL-EGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGRGG 367
BLAST of Lsi05G018670 vs. Swiss-Prot
Match:
HNRPR_HUMAN (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens GN=HNRNPR PE=1 SV=1)
HSP 1 Score: 126.3 bits (316), Expect = 1.5e-27
Identity = 98/306 (32.03%), Postives = 158/306 (51.63%), Query Frame = 1
Query: 230 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSE 289
EVFVG + +D+ E++L +F G + ++RLMM+P + +N+G+AF+ F E A+ AV
Sbjct: 166 EVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKL 225
Query: 290 LKNPVIN-GKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNN 349
+ I GK GV S ++ LF+G+I K K+ + E+ + + D+ L ++
Sbjct: 226 CDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKV-TEGLVDVILYHQPDD 285
Query: 350 EGSNRGFAFLEFSSRSDAMDAFKRLQKRDV-VFGVDRPAKVSFADSFIDPGDEIMAQVKT 409
+ NRGF FLE+ A A +RL V V+G V +AD +P E+MA+VK
Sbjct: 286 KKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWG--NVVTVEWADPVEEPDPEVMAKVKV 345
Query: 410 VFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSI 469
+FV +L + EE + ++G++E+++ K KD+ FV F+ AAV +
Sbjct: 346 LFVRNLATTVTEEILEKSFSEFGKLERVK--------KLKDYAFVHFEDRGAAVKAMDEM 405
Query: 470 NNSELGEGDNKAKVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVPVR 529
N E+ EG+ V A+ P ++ K + A+R R+T A + P PR P
Sbjct: 406 NGKEI-EGEEIEIVLAK--PPDKKRKERQAARQ---ASRST--AYEDYYYHPPPRMPPPI 452
Query: 530 GVRGVG 534
RG G
Sbjct: 466 RGRGRG 452
BLAST of Lsi05G018670 vs. Swiss-Prot
Match:
RBM47_CANLF (RNA-binding protein 47 OS=Canis lupus familiaris GN=RBM47 PE=2 SV=1)
HSP 1 Score: 118.2 bits (295), Expect = 4.0e-25
Identity = 85/247 (34.41%), Postives = 139/247 (56.28%), Query Frame = 1
Query: 230 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSE 289
EVFVG + +DV E++L VF AVG + E+RLMM+ KN+G+AF+ + EAKRAV E
Sbjct: 74 EVFVGKIPRDVYEDELVPVFEAVGRIYELRLMMD-FDGKNRGYAFVTYCHKGEAKRAVRE 133
Query: 290 LKNPVIN-GKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNN 349
L N I G+ GV S D+ LF+G I K K++ + E++ + V D+ + + +
Sbjct: 134 LNNHEIRPGRLLGVCCSVDNCRLFIGGIPKMKKREEILEEIAKV-TEGVLDVIVYASAAD 193
Query: 350 EGSNRGFAFLEFSS-RSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKT 409
+ NRGFAF+E+ S R+ AM K + R ++G V +A+ ID +++M VK
Sbjct: 194 KMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWG--HQIAVDWAEPEIDVDEDVMETVKI 253
Query: 410 VFVDSLPASWDEEFVRGLLKKY--GEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAK 469
++V +L E+ ++ ++ G +E+++ K +D+ FV F + + AV
Sbjct: 254 LYVRNLMIETTEDTIKKSFGQFNPGCVERVK--------KIRDYAFVHFASREDAVLAMN 308
Query: 470 SINNSEL 473
S+N +EL
Sbjct: 314 SLNGTEL 308
BLAST of Lsi05G018670 vs. TrEMBL
Match:
A0A0A0L6P0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129610 PE=4 SV=1)
HSP 1 Score: 1393.3 bits (3605), Expect = 0.0e+00
Identity = 746/794 (93.95%), Postives = 762/794 (95.97%), Query Frame = 1
Query: 1 MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVEVETKELREE 60
MPPRTVKRG+ASAG+KRGGR TRGTPKKQDQP EREV EET KVEEVSVVEVETKELREE
Sbjct: 1 MPPRTVKRGSASAGAKRGGRTTRGTPKKQDQPAEREVVEETAKVEEVSVVEVETKELREE 60
Query: 61 VTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSDLK-SIPPKKEEEVKD 120
V VQEKSPVVEDKPVIQNKPVVVEEKQPIA+DV EVE S EVRSD K S+PPKKEEEVKD
Sbjct: 61 VAVQEKSPVVEDKPVIQNKPVVVEEKQPIAVDVGEVESSREVRSDSKQSVPPKKEEEVKD 120
Query: 121 EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV 180
EEYGKDERLDLEDNDPESEP+EDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV
Sbjct: 121 EEYGKDERLDLEDNDPESEPDEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV 180
Query: 181 EDDAEDAQEDLEVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFVGGLDKD 240
E+D EDAQEDLE E+DDQQ GEDHEHAGMVD DEDEH+EVVKERRKRKEFEVFVGGLDKD
Sbjct: 181 EEDVEDAQEDLEGEDDDQQGGEDHEHAGMVDADEDEHHEVVKERRKRKEFEVFVGGLDKD 240
Query: 241 VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNPVINGKQ 300
VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFA+VEEAKRAVSELKNPVINGKQ
Sbjct: 241 VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKNPVINGKQ 300
Query: 301 CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE 360
CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE
Sbjct: 301 CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE 360
Query: 361 FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE 420
FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE
Sbjct: 361 FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE 420
Query: 421 EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGDNKA 480
EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGDNKA
Sbjct: 421 EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGDNKA 480
Query: 481 KVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVPVRGVRGVGSHLPPV 540
KVRARLSRPLQRGKGKHASR DYWPGRTTGR VRGSW RPAPRS+P+RGVRGVGSHLPPV
Sbjct: 481 KVRARLSRPLQRGKGKHASRTDYWPGRTTGR-VRGSWTRPAPRSIPIRGVRGVGSHLPPV 540
Query: 541 SVKRPSGVRDRRPVIAVPARGRAIAPVARSYDRGPPVASYSKSSLKREYGRREELHPSRS 600
SVKRPSGVRDRRPVIAVP RGR +A VARSYDRGPPVASYSKSSLKR+YGRREELHPSRS
Sbjct: 541 SVKRPSGVRDRRPVIAVPPRGRPVAAVARSYDRGPPVASYSKSSLKRDYGRREELHPSRS 600
Query: 601 RMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPRRDAPRRAYVDDGYGRRFERPPPASYR 660
RMLVDY+SRVVPERNPSYRD+YASRAAAFSD PRRDAPRRAYVDDGY RRFERPPP SYR
Sbjct: 601 RMLVDYASRVVPERNPSYRDDYASRAAAFSDPPRRDAPRRAYVDDGYSRRFERPPPPSYR 660
Query: 661 DVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGDAYDGRFLV 720
DVRARDYDALIGSKRPYSS+SDVPPAYAD GVRQSRSRLDYDYGAGASQYGDAYD
Sbjct: 661 DVRARDYDALIGSKRPYSSMSDVPPAYADTGVRQSRSRLDYDYGAGASQYGDAYD----- 720
Query: 721 GRIGRSNIGGYDSRSSISGSFSSDVSGMYSSSYGGDYMTRGSNVGG-SSYSSMYPGRSVG 780
RIGRSNIGGYDSRSSISGSFSSDV GMYSSSYGGDYMTRGSNVGG SSYSSMYPGRSVG
Sbjct: 721 SRIGRSNIGGYDSRSSISGSFSSDVGGMYSSSYGGDYMTRGSNVGGSSSYSSMYPGRSVG 780
Query: 781 GSSYMGSGGSGSYY 793
GSSYMGSGGSGSYY
Sbjct: 781 GSSYMGSGGSGSYY 788
BLAST of Lsi05G018670 vs. TrEMBL
Match:
W9QJ30_9ROSA (Heterogeneous nuclear ribonucleoprotein Q OS=Morus notabilis GN=L484_008031 PE=4 SV=1)
HSP 1 Score: 972.2 bits (2512), Expect = 3.7e-280
Identity = 563/822 (68.49%), Postives = 649/822 (78.95%), Query Frame = 1
Query: 1 MPPRTVKRGAASAGSKRGGRVTRGTPKKQD-QPVEREVAEETVKVEEVSVVEVETKE--- 60
MPPRTVKRGA G +R GRVTRG+ K Q+ QP + V E+ V VEEV + E KE
Sbjct: 1 MPPRTVKRGA---GPRRTGRVTRGSQKAQNHQPPD--VPEDPVTVEEVPIRATEAKEDVK 60
Query: 61 LREEVTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVE-EVEPSHEVRSDLKSIPPKKEE 120
+ E T++EK P +E+KPV+ N+ + ++VE + EP+ + D K +E
Sbjct: 61 VEAEPTMEEKPPAIEEKPVVVNQLIS-------DLNVEAKAEPNGLEKED------KMKE 120
Query: 121 EVKDEEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVD-GEGEPEDNVGDE 180
V +EY KDERLDLEDN+PE E EE G +YDEKEI+QEDVQEV D GE +PE+N+G+E
Sbjct: 121 SV--DEYEKDERLDLEDNEPEYENEEYVGVDYDEKEIDQEDVQEVGDEGEEDPEENLGEE 180
Query: 181 -EGDMVEDDAEDAQEDLEVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFV 240
EGD E+ E+LE EE ++ AGEDHEH D DEDEH+EVVKERRKRKEFEVFV
Sbjct: 181 DEGD------EEELEELEGEEYEEHAGEDHEHVEHADADEDEHHEVVKERRKRKEFEVFV 240
Query: 241 GGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNP 300
GGLDKD E DL+KVFSAVGEVTEVRLMMNPQTKKNKGFAFLRF++VE+AKRAV+ELKNP
Sbjct: 241 GGLDKDATEGDLRKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFSTVEQAKRAVTELKNP 300
Query: 301 VINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNR 360
VI GKQCGVTPSQDSDTLFLGNICKTW K+ALKEKLKHYGV+NVED+TLVEDSNN+G NR
Sbjct: 301 VIKGKQCGVTPSQDSDTLFLGNICKTWSKEALKEKLKHYGVNNVEDVTLVEDSNNDGMNR 360
Query: 361 GFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSL 420
GFAFLEFSSRS+AMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVD L
Sbjct: 361 GFAFLEFSSRSEAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGL 420
Query: 421 PASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELG 480
PA+WDE+ VR LLKKYGEI KIELARNMPSAKRKDFGFVTFDTHDAAV+CAKSINN ELG
Sbjct: 421 PATWDEDRVRWLLKKYGEIVKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNVELG 480
Query: 481 EGDNKAKVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVPVRGVRGVG 540
EG NKAKVRARLSRPLQ+GKG+H +R D+ R +GR V+GSW P+PRS+P+RG+RG G
Sbjct: 481 EGGNKAKVRARLSRPLQKGKGRHVARGDFRSSRGSGRVVKGSWSHPSPRSLPMRGLRGAG 540
Query: 541 SHLPPVSVKRPSGVRDRRPVIAVPARGRAIAPVARSYDRGPPVASYSKSSLKREYGRREE 600
S +PP SVKRP+G RDRRPV++VP R R +AP ARSYDR PV+SY KSSLKREY RR+E
Sbjct: 541 SRIPPPSVKRPAGFRDRRPVMSVPVRARPLAPPARSYDRRAPVSSYPKSSLKREYSRRDE 600
Query: 601 LHPSRSRMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPR---RDAPRRAYVDDGYGRRF 660
+ P RSR + DY SRVV ER PSYRD+Y+SRA+ +SD PR R + RRAYVDDGYG RF
Sbjct: 601 ILPPRSRAVADYGSRVVHERRPSYRDDYSSRASGYSDPPRSTSRTSARRAYVDDGYGPRF 660
Query: 661 ER----PPPASYRDVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGA 720
ER PPP SYR+ RARDYD++ GSKRPYSS+ DVPP YADA VRQSR+RLDY+YG+G
Sbjct: 661 ERPPPPPPPPSYREGRARDYDSVSGSKRPYSSMDDVPPRYADASVRQSRARLDYEYGSGG 720
Query: 721 SQYGDAYDGRFLVGRIGRSNIGGYDSRSS--ISGSFSS--------------DVSGMYSS 780
S YGDAY R+GRSN+G SR+S G +SS D GMYSS
Sbjct: 721 SHYGDAYG-----DRLGRSNLGYGSSRTSQDSHGLYSSRQGMGYGEGSYGGGDAGGMYSS 780
Query: 781 SYGGDYMTRGSNVGGSSYSSMYPGRSVGGSSYMGSGGSGSYY 793
SYGG+Y++RG +VGGSSYSSMYPGR +GGSSYMGSGGSGSYY
Sbjct: 781 SYGGEYISRGPDVGGSSYSSMYPGRGMGGSSYMGSGGSGSYY 791
BLAST of Lsi05G018670 vs. TrEMBL
Match:
D7SM13_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01160 PE=4 SV=1)
HSP 1 Score: 966.1 bits (2496), Expect = 2.7e-278
Identity = 570/830 (68.67%), Postives = 642/830 (77.35%), Query Frame = 1
Query: 1 MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVEVETKELRE- 60
MPPR VK+ AA+ +KR R TRGTPK Q QP E + E VK EEVSV VE KE +
Sbjct: 1 MPPRAVKKTAAA--TKRTPRATRGTPKVQPQP---EASVEPVKAEEVSVPVVEVKEEVKV 60
Query: 61 ----EVTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSDLKSIPPKKEE 120
EV V EK+P E +PV + +P E +P + + EP E ++ S P KKE+
Sbjct: 61 AEAVEVKVVEKAP--EPEPVPEPEPEPEPEPEPES----KAEPEQESNTNRLS-PVKKED 120
Query: 121 EVKDE-------EYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDG--EGE 180
E+K+ EY KDERLDLEDN+PE E EE GG +YDEKEIEQED+ + D E
Sbjct: 121 EIKESVDEYEKNEYEKDERLDLEDNEPEYETEEYGGVDYDEKEIEQEDIPDGGDEVEEEN 180
Query: 181 PEDNVGDEE-GDMVEDDAEDAQEDLEVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRK 240
E +VG+EE GD+ E+ ED E+LE EEDD+ AGE EHA MVD +++EH+EV KERRK
Sbjct: 181 EEGDVGEEEDGDVGEEGMEDVPEELEGEEDDEHAGELQEHAEMVDAEDEEHHEVFKERRK 240
Query: 241 RKEFEVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKR 300
RKEFEVFVGGLDKD E+DL+KVFS VGEVTEVRLMMNPQTKKNKGFAFLRFA+VE+AKR
Sbjct: 241 RKEFEVFVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKR 300
Query: 301 AVSELKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVED 360
AV+ELKNPV+NGKQCGVTPSQDSDTLFLGNICKTW K+ALKEKLKHYGV+NVEDLTLVED
Sbjct: 301 AVTELKNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDLTLVED 360
Query: 361 SNNEGSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQV 420
SNNEG NRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDR AKVSFADSFIDPGDEIMAQV
Sbjct: 361 SNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRTAKVSFADSFIDPGDEIMAQV 420
Query: 421 KTVFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAK 480
KTVF+D LPASWDE+ VR LLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAV+CAK
Sbjct: 421 KTVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVTCAK 480
Query: 481 SINNSELGEGDNKAKVRARLSRPLQRGKGKHASRADYWPGR-TTGRAVRGSWGRPAPRSV 540
SINN+ELGEG+NKAKVRARLSRPLQRGKGKH SR D+ PGR R VRGSW RPA RS
Sbjct: 481 SINNAELGEGENKAKVRARLSRPLQRGKGKHISRGDFRPGRGGPVRGVRGSWARPALRSF 540
Query: 541 PVRGVRGVGSHLPPVSVKRPSGVRDRRPVIAVPARGRAIAPVARSYDRGPPVASYSKSSL 600
P RG RG+G LPP +VKRP G RDRRPV+A+P RGR + P +RSYDR PV +Y K +L
Sbjct: 541 PGRGARGLGPRLPPAAVKRPIGFRDRRPVMAMPPRGRPLPPPSRSYDRRAPVPAYPKPNL 600
Query: 601 KREYGRREELHPSRSRMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPR---RDAPRRAY 660
KR+YGRREE+ P RSR VDY SRV PER PSYRD+YA+R + +SD PR R A RR Y
Sbjct: 601 KRDYGRREEV-PLRSRPAVDYGSRVAPERRPSYRDDYATRGSGYSDIPRNTSRTAARRTY 660
Query: 661 VDDGYGRRFERPPPASYRDVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYD 720
DD YG+RFERPPP SYR+ R RDYD++ GSKRPY +L DVPP YADA VRQSR+RLDY+
Sbjct: 661 EDDAYGQRFERPPPPSYREGRPRDYDSIAGSKRPYGALDDVPPRYADASVRQSRARLDYE 720
Query: 721 YGAGASQYGDAYDGRFLVGRIGRSNIGGYDSRSSIS------------------GSF-SS 780
AGASQYGDAY R+GRSN+G SRSS+S GSF S
Sbjct: 721 MSAGASQYGDAYG-----DRLGRSNLGYGGSRSSMSSQDSHGLYSSRQGMGYGGGSFGGS 780
Query: 781 DVSGMYSSSYGGDYMTRGSNVGGSSYSSMYPGRSVGGSSYMGSGGSGSYY 793
DV GMYSSSYG DYM RG++VGGSSYSS+Y R VGGSSYMGSGGSGSYY
Sbjct: 781 DVGGMYSSSYGSDYMPRGADVGGSSYSSLYSSRGVGGSSYMGSGGSGSYY 812
BLAST of Lsi05G018670 vs. TrEMBL
Match:
V4U933_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018944mg PE=4 SV=1)
HSP 1 Score: 956.8 bits (2472), Expect = 1.6e-275
Identity = 566/819 (69.11%), Postives = 632/819 (77.17%), Query Frame = 1
Query: 1 MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVEVETKELREE 60
MPPRTVKRGAA G +R R TRGT K+Q EVAEETVKVEEV V E
Sbjct: 1 MPPRTVKRGAA--GPRRTARATRGTAKQQ-----AEVAEETVKVEEVPVKE--------- 60
Query: 61 VTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSDLKSIPPKKEEEVKD- 120
E+ VVED NKPVVVE+ EP +V + + +KE+EVK+
Sbjct: 61 ----EEKAVVED----DNKPVVVED-----------EPKSDVNGSVPAT--QKEDEVKES 120
Query: 121 -EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPED-NVGDEE-G 180
+EY KDERLDL+DN+PE EPEE GG +YD+KE E EDVQEV + E E +D NVG+EE
Sbjct: 121 VDEYEKDERLDLDDNEPEYEPEEYGGVDYDDKETEHEDVQEVGNEEDEHDDENVGEEEED 180
Query: 181 DMVEDDAEDAQEDL-EVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFVGG 240
D+ E + ED E+ + EE+ + AGE+ E MVD +E +H+E+ +ERRKRKEFEVFVGG
Sbjct: 181 DLAEGEMEDVPEEHGQGEEEVENAGEEAERPEMVDAEEHDHHEMFQERRKRKEFEVFVGG 240
Query: 241 LDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNPVI 300
LDKDV +DL+KVFS VGEVTEVRLMMNPQTKKNKGFAFLRFA+VE+A++AV+ELKNPVI
Sbjct: 241 LDKDVVGDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQARQAVTELKNPVI 300
Query: 301 NGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGF 360
NGKQCGVTPSQDSDTLFLGNICKTW K+ALKEKLKHYGVDNVEDLTLVEDSNNEG NRGF
Sbjct: 301 NGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNVEDLTLVEDSNNEGMNRGF 360
Query: 361 AFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPA 420
AFLEFSSRSDAMDAFKRLQKRDV+FGVDRPAKVSFADSFIDPGDEIMAQVKTVFVD LPA
Sbjct: 361 AFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGLPA 420
Query: 421 SWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEG 480
SWDE+ VR LLK YGEI KIELARNMPSAKRKDFGFVTFDTHDAAV+CAKSINN+ELGEG
Sbjct: 421 SWDEDRVRELLKNYGEITKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNAELGEG 480
Query: 481 DNKAKVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVPVRGVRGVGSH 540
DNKAKVRARLSRPLQRGKGKHASR D+ GR TGRA RGSWG P+PRS+P R RG+GS
Sbjct: 481 DNKAKVRARLSRPLQRGKGKHASRGDFRSGRGTGRATRGSWGLPSPRSLPGRSARGIGSR 540
Query: 541 LPPVSVKRPSGVRDRRPVIAVPARGRAI-APVARSYDRGPPVASYSKSSLKREYGRREEL 600
LPP SVKRP VRDRRP++++ AR R + P RSYDR PV SY K LKREYGRR+E+
Sbjct: 541 LPPASVKRPVPVRDRRPIMSMTARARPMPPPPPRSYDRRAPVPSYPKPGLKREYGRRDEV 600
Query: 601 HPSRSRMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPR---RDAPRRAYVDDGYGRRFE 660
P RSR VDY SRVVP+R P YRDEY SR + + D PR R A RR YVDDGY +RFE
Sbjct: 601 PPPRSRAPVDYGSRVVPDRRP-YRDEYTSRGSGYPDMPRSTSRGAARRPYVDDGYAQRFE 660
Query: 661 RPPPASYRDVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGD 720
RPPP SYR+ RARDY+ + GSKRPYS + DVPP YAD GVR SR+RLDYD G GA QYGD
Sbjct: 661 RPPP-SYREGRARDYETVSGSKRPYSVVDDVPPRYADPGVRHSRARLDYDLGGGAPQYGD 720
Query: 721 AYDGRFLVGRIGRSNIGGYDSRSSIS-----------------GSFS-SDVSGMYSSSYG 780
AY R+GRSN+G SRSSIS GS+S DV GMYSSSYG
Sbjct: 721 AYG-----DRMGRSNLGYGGSRSSISSQDSHGLYSSRQGMGYGGSYSGGDVGGMYSSSYG 775
Query: 781 GDYMTRGSNVGGSSYSSMYPGRSVGGSSYMGSGGSGSYY 793
DYM RGS+VGGSSYSSMYPGR VGGSSYMGSGGSGSYY
Sbjct: 781 SDYMPRGSDVGGSSYSSMYPGRGVGGSSYMGSGGSGSYY 775
BLAST of Lsi05G018670 vs. TrEMBL
Match:
G9I823_CITSI (RNA recognition motif protein 1 OS=Citrus sinensis GN=RRMP1 PE=2 SV=1)
HSP 1 Score: 956.8 bits (2472), Expect = 1.6e-275
Identity = 566/819 (69.11%), Postives = 632/819 (77.17%), Query Frame = 1
Query: 1 MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVEVETKELREE 60
MPPRTVKRGAA G +R R TRGT K+Q EVAEETVKVEEV V E
Sbjct: 1 MPPRTVKRGAA--GPRRTARATRGTAKQQ-----AEVAEETVKVEEVPVKE--------- 60
Query: 61 VTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSDLKSIPPKKEEEVKD- 120
E+ VVED NKPVVVE+ EP +V + + +KE+EVK+
Sbjct: 61 ----EEKAVVED----DNKPVVVED-----------EPKSDVNGSVPAT--QKEDEVKES 120
Query: 121 -EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPED-NVGDEE-G 180
+EY KDERLDL+DN+PE EPEE GG +YD+KE E EDVQEV + E E +D NVG+EE
Sbjct: 121 VDEYEKDERLDLDDNEPEYEPEEYGGVDYDDKETEHEDVQEVGNEEDEHDDENVGEEEED 180
Query: 181 DMVEDDAEDAQEDL-EVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFVGG 240
D+ E + ED E+ + EE+ + AGE+ E MVD +E +H+E+ +ERRKRKEFEVFVGG
Sbjct: 181 DLAEGEMEDVPEEHGQGEEEVENAGEEAERPEMVDAEEHDHHEMFQERRKRKEFEVFVGG 240
Query: 241 LDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNPVI 300
LDKDV +DL+KVFS VGEVTEVRLMMNPQTKKNKGFAFLRFA+VE+A++AV+ELKNPVI
Sbjct: 241 LDKDVVGDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQARQAVTELKNPVI 300
Query: 301 NGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGF 360
NGKQCGVTPSQDSDTLFLGNICKTW K+ALKEKLKHYGVDNVEDLTLVEDSNNEG NRGF
Sbjct: 301 NGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNVEDLTLVEDSNNEGMNRGF 360
Query: 361 AFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPA 420
AFLEFSSRSDAMDAFKRLQKRDV+FGVDRPAKVSFADSFIDPGDEIMAQVKTVFVD LPA
Sbjct: 361 AFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGLPA 420
Query: 421 SWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEG 480
SWDE+ VR LLK YGEI KIELARNMPSAKRKDFGFVTFDTHDAAV+CAKSINN+ELGEG
Sbjct: 421 SWDEDRVRELLKNYGEITKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNAELGEG 480
Query: 481 DNKAKVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVPVRGVRGVGSH 540
DNKAKVRARLSRPLQRGKGKHASR D+ GR TGRA RGSWG P+PRS+P R RG+GS
Sbjct: 481 DNKAKVRARLSRPLQRGKGKHASRGDFRSGRGTGRATRGSWGLPSPRSLPGRSARGIGSR 540
Query: 541 LPPVSVKRPSGVRDRRPVIAVPARGRAI-APVARSYDRGPPVASYSKSSLKREYGRREEL 600
LPP SVKRP VRDRRP++++ AR R + P RSYDR PV SY K LKREYGRR+E+
Sbjct: 541 LPPASVKRPVPVRDRRPIMSMTARARPMPPPPPRSYDRRAPVPSYPKPGLKREYGRRDEV 600
Query: 601 HPSRSRMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPR---RDAPRRAYVDDGYGRRFE 660
P RSR VDY SRVVP+R P YRDEY SR + + D PR R A RR YVDDGY +RFE
Sbjct: 601 PPPRSRAPVDYGSRVVPDRRP-YRDEYTSRGSGYPDMPRSTSRGAARRPYVDDGYAQRFE 660
Query: 661 RPPPASYRDVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGD 720
RPPP SYR+ RARDY+ + GSKRPYS + DVPP YAD GVR SR+RLDYD G GA QYGD
Sbjct: 661 RPPP-SYREGRARDYETVSGSKRPYSVVDDVPPRYADPGVRHSRARLDYDLGGGAPQYGD 720
Query: 721 AYDGRFLVGRIGRSNIGGYDSRSSIS-----------------GSFS-SDVSGMYSSSYG 780
AY R+GRSN+G SRSSIS GS+S DV GMYSSSYG
Sbjct: 721 AYG-----DRMGRSNLGYGGSRSSISSQDSHGLYSSRQGMGYGGSYSGGDVGGMYSSSYG 775
Query: 781 GDYMTRGSNVGGSSYSSMYPGRSVGGSSYMGSGGSGSYY 793
DYM RGS+VGGSSYSSMYPGR VGGSSYMGSGGSGSYY
Sbjct: 781 SDYMPRGSDVGGSSYSSMYPGRGVGGSSYMGSGGSGSYY 775
BLAST of Lsi05G018670 vs. TAIR10
Match:
AT2G44710.1 (AT2G44710.1 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 712.6 bits (1838), Expect = 2.7e-205
Identity = 463/839 (55.18%), Postives = 573/839 (68.30%), Query Frame = 1
Query: 1 MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVE-VETKELRE 60
MPP+ VKRG A+ +RGGR+TR K Q+ VE +E+V + E+S + +E KE+
Sbjct: 1 MPPKVVKRGGAA---RRGGRLTRSALKAQNPHVESS-HDESVNIGELSGSDALEAKEVTP 60
Query: 61 EV--TVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSDLKSIPPKKEEEV 120
EV TV+E++P+ D P K +ID E + V +P KKE EV
Sbjct: 61 EVDKTVEEENPL--DVP-----------KSSDSIDDSEAAANPHV-----DVPSKKETEV 120
Query: 121 KD--EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEP--EDNVGD 180
++ +++GKDERLDL+DN+PE E EE GG E++E+E+ QED E+V+ EGE E+ +
Sbjct: 121 EESVDDFGKDERLDLDDNEPEYEAEEYGGEEFEERELGQED-HELVNEEGEELEEEIEVE 180
Query: 181 EEGDMVEDDAEDAQEDLEVEEDDQQ-AGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVF 240
EE D+ D EDL+ E+DD A E+ +H VDV+E+EH++V+ ERRKRKEFE+F
Sbjct: 181 EEAGEFADEIGDGAEDLDSEDDDDDHAIEEVKHGETVDVEEEEHHDVLHERRKRKEFEIF 240
Query: 241 VGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKN 300
VG LDK EEDLKKVF VGEVTEVR++ NPQTKK+KG AFLRFA+VE+AKRAV ELK+
Sbjct: 241 VGSLDKGASEEDLKKVFGHVGEVTEVRILKNPQTKKSKGSAFLRFATVEQAKRAVKELKS 300
Query: 301 PVINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSN 360
P+INGK+CGVT SQD+DTLF+GNICK W +AL+EKLKHYGV+N++D+TLVEDSNN N
Sbjct: 301 PMINGKKCGVTASQDNDTLFVGNICKIWTPEALREKLKHYGVENMDDITLVEDSNNVNMN 360
Query: 361 RGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDS 420
RG+AFLEFSSRSDAMDA KRL K+DV+FGV++PAKVSF DSF+D DEIMAQVKT+F+D
Sbjct: 361 RGYAFLEFSSRSDAMDAHKRLVKKDVMFGVEKPAKVSFTDSFLDLEDEIMAQVKTIFIDG 420
Query: 421 LPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSEL 480
L SW+EE VR LLK YG++EK+ELARNMPSA+RKDFGFVTFDTH+AAVSCAK INNSEL
Sbjct: 421 LLPSWNEERVRDLLKPYGKLEKVELARNMPSARRKDFGFVTFDTHEAAVSCAKFINNSEL 480
Query: 481 GEGDNKAKVRARLSRPLQR-GKGKHASRADYWPGRTTGRAVRGSWGRPAPRSV-PVRGVR 540
GEG++KAKVRARLSRPLQ+ GKG+ +SR+D GR+ R S+ R PRS+ R R
Sbjct: 481 GEGEDKAKVRARLSRPLQKAGKGRQSSRSDQRSRHGAGRSGRSSFARLPPRSLASSRSAR 540
Query: 541 GVGSHLPPVSVKRPSGVRDRRP--------------------VIAVPARGRAIAPVARSY 600
G GS P S KR SG R RRP + PAR R + P ARSY
Sbjct: 541 GAGSRAPSSSAKRASGSRGRRPRPPLPPPARARPLPPPARARPMPPPARARPLPPPARSY 600
Query: 601 DRGPPVASYSKSSLKREYGRREELHPSRSRMLVDYSSRVVPERNPSYRDEYASRAAAFSD 660
DR PPV Y K+SLKR+Y RR+EL P RSR V YSSR+ PER+ SYRD+Y R + +SD
Sbjct: 601 DRRPPVPLYPKASLKRDYDRRDELPPPRSRPAVSYSSRLSPERHLSYRDDYPPRGSGYSD 660
Query: 661 QPR---RDAPRRAYVDDGYGRRFERPPPASYRDVRARDYDALIGSKRPYSSLSDVPPAYA 720
PR R RR +VDD Y RFERPP SY + R R Y+ L GSKRPY++L D+PP YA
Sbjct: 661 LPRSSSRSEIRRPFVDDLYSPRFERPP--SYSEGRPRAYEPLPGSKRPYAALDDLPPRYA 720
Query: 721 DAGVRQSRSRLDYDYGAGASQYGDAYDGRFLVGRIG----RSNIGGYDSRSSIS------ 780
D VR SR RLDYD G SQYG++Y R +G R+++ +DSR S
Sbjct: 721 DVDVRHSRPRLDYD--VGPSQYGESYGDRIPRSSLGYGSSRNSMSNHDSRGPYSSRQGMD 780
Query: 781 ---GSFSSDVSGMYSS-SYGGDYMTRGSNVGGSSYSSMYPGRSVGGSSYMGSGGSGSYY 793
GS+S G S SYGGD R GGSSYSS+Y R +GGSSY G GG GSYY
Sbjct: 781 YGGGSYSGSDVGGMYSSSYGGDLPRRDG--GGSSYSSIYSSRGLGGSSYSG-GGPGSYY 809
BLAST of Lsi05G018670 vs. TAIR10
Match:
AT4G00830.1 (AT4G00830.1 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 124.4 bits (311), Expect = 3.1e-28
Identity = 131/440 (29.77%), Postives = 221/440 (50.23%), Query Frame = 1
Query: 125 DERLDLED---NDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMVED 184
D+R+D E+ ++ E E EE+ EY+E+E E +D +V G E+ ++ GD
Sbjct: 8 DDRVDFEEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDV--GNQNAEEREVEDYGDTKGG 67
Query: 185 DAEDAQEDLEVEEDD----QQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFVGGLD 244
D ED QE++ ++D+ + A +D + +D DED EVF+GGL
Sbjct: 68 DMEDVQEEIAEDDDNHIDIETADDDEKPPSPID-DEDREKYSHLLSLPPHGSEVFIGGLP 127
Query: 245 KDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNPVING 304
+DV EEDL+ + +GE+ EVRLM + + +KG+AF+ F + + A++A+ EL + G
Sbjct: 128 RDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELHSKEFKG 187
Query: 305 KQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAF 364
K + S+ + LF+GNI K W +D ++ ++ G VE++ L++D N NRGFAF
Sbjct: 188 KTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVG-PGVENIELIKDPTNTTRNRGFAF 247
Query: 365 LEFSSRSDAMDAFKRLQKRDVVFGVDRPA-KVSFADSFIDP-GDEIMAQVKTVFVDSLPA 424
+ + ++A + R + D F ++ A V++AD P AQVK ++V ++P
Sbjct: 248 VLY--YNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPE 307
Query: 425 SWDEEFVRGLLKKYGEIEKIELARNMPSAK--RKDFGFVTFDTHDAAVSCAKSINNSELG 484
+ E ++ L +++GE+ KI P K ++DFGFV + +A+ K E+
Sbjct: 308 NTSTEQLKELFQRHGEVTKIV----TPPGKGGKRDFGFVHYAERSSALKAVKDTERYEV- 367
Query: 485 EGDNKAKVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWG--RPAPRSVPVRGVRG 544
N + L++P Q + S Y T V ++G AP G+
Sbjct: 368 ---NGQPLEVVLAKP-QAERKHDPSSYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGLGI 427
Query: 545 VGSHLPPVSVKR---PSGVR 549
GS P+ R P+G++
Sbjct: 428 AGSFSQPMIYGRGAMPTGMQ 432
BLAST of Lsi05G018670 vs. TAIR10
Match:
AT3G52660.1 (AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 124.0 bits (310), Expect = 4.1e-28
Identity = 100/350 (28.57%), Postives = 175/350 (50.00%), Query Frame = 1
Query: 125 DERLDLE-DNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMVEDDA 184
+ER+DL+ DNDPE EE+ +E E+E+E+++E+
Sbjct: 18 EERVDLDGDNDPEEILEEEVEYE----EVEEEEIEEI----------------------E 77
Query: 185 EDAQEDLEVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFVGGLDKDVKEE 244
E+ +E++EVEE+ E+ E A + +E++ V EV++GG+ D E
Sbjct: 78 EEIEEEVEVEEE-----EEEEDAVATEEEEEKKRHVELLALPPHGSEVYLGGIPTDATEG 137
Query: 245 DLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNPVINGKQCGVT 304
DLK ++GEVTEVR+M + KG+AF+ F S + A A+ L N GK+ +
Sbjct: 138 DLKGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCS 197
Query: 305 PSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLEFSSR 364
+Q LFLGN+ + W + +K+ G V+ + L ++ N G NRGFAF+E+ +
Sbjct: 198 TTQAKHRLFLGNVPRNWMESDIKKAANRIG-PGVQIVELPKEPQNMGRNRGFAFIEYYNH 257
Query: 365 SDAMDAFKRLQKRDVVFGVDRPAKVSFADSFI-DPGDEIMAQVKTVFVDSLPASWDEEFV 424
+ A + +++ + P VS+A+S GD +QVK +++ +LP +E +
Sbjct: 258 ACAEYSKQKMSNPSFKLDDNAPT-VSWAESRSGGGGDSSASQVKALYIKNLPRDITQERL 317
Query: 425 RGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSEL 473
+ L + +G+I K+ + P + +GFV + + + K+ E+
Sbjct: 318 KALFEHHGKILKVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEI 334
BLAST of Lsi05G018670 vs. TAIR10
Match:
AT1G49760.1 (AT1G49760.1 poly(A) binding protein 8)
HSP 1 Score: 74.3 bits (181), Expect = 3.7e-13
Identity = 65/290 (22.41%), Postives = 128/290 (44.14%), Query Frame = 1
Query: 231 VFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSEL 290
++VG LD V + L + F+ G+V VR+ + T+++ G+ ++ +A+ ++A RA++EL
Sbjct: 47 LYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNEL 106
Query: 291 KNPVINGKQCGVTPSQDSDTL--------FLGNICKTWKKDALKEKLKHYGVDNVEDLTL 350
+NG+ V S +L F+ N+ K+ AL E +G L+
Sbjct: 107 NFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFG----PILSC 166
Query: 351 VEDSNNEGSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFI-----DP 410
+ G ++G+ F+++ + A A +L G+ K + F+ DP
Sbjct: 167 KVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLN------GMLLNDKQVYVGPFVHKLQRDP 226
Query: 411 GDEIMAQVKTVFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTH 470
E + V+V +L S +E + + ++G + R+ K K FGFV F+
Sbjct: 227 SGE-KVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRD-GEGKSKGFGFVNFENS 286
Query: 471 DAAVSCAKSINNSE-------LGEGDNKAKVRARLSRPLQRGKGKHASRA 501
D A ++N +G+ K++ L + ++ + A ++
Sbjct: 287 DDAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKS 324
BLAST of Lsi05G018670 vs. TAIR10
Match:
AT2G36660.1 (AT2G36660.1 poly(A) binding protein 7)
HSP 1 Score: 68.9 bits (167), Expect = 1.6e-11
Identity = 56/253 (22.13%), Postives = 113/253 (44.66%), Query Frame = 1
Query: 231 VFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSEL 290
++VG L V E L F+ +T VRL + + ++ + + F S ++A A+ +
Sbjct: 26 LYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKK 85
Query: 291 KNPVINGKQCGVTPS--------QDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTL 350
N ++NGK V S +F+ N+ ++ L++ K +G +
Sbjct: 86 NNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSCKVAT 145
Query: 351 VEDSNNEGSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIM 410
+ED G +RG+ F++F A A + L V K + F+ D +
Sbjct: 146 LED----GKSRGYGFVQFEQEDAAHAAIQTLNSTIVA------DKEIYVGKFMKKTDRVK 205
Query: 411 AQVK--TVFVDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAA 470
+ K +++ +L A E+ +R ++G+I + +A++ + + + FV FD + A
Sbjct: 206 PEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKD-ENRLCRGYAFVNFDNPEDA 265
Query: 471 VSCAKSINNSELG 474
A+++N ++ G
Sbjct: 266 RRAAETVNGTKFG 267
BLAST of Lsi05G018670 vs. NCBI nr
Match:
gi|659075752|ref|XP_008438311.1| (PREDICTED: nucleolin [Cucumis melo])
HSP 1 Score: 1395.9 bits (3612), Expect = 0.0e+00
Identity = 750/794 (94.46%), Postives = 765/794 (96.35%), Query Frame = 1
Query: 1 MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVEVETKELREE 60
MPPRTVKRG+ASAG+KRGGR TRGTPKKQDQP EREVAEET KVEEVSVVEVETKELREE
Sbjct: 1 MPPRTVKRGSASAGAKRGGRTTRGTPKKQDQPAEREVAEETAKVEEVSVVEVETKELREE 60
Query: 61 VTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSDLK-SIPPKKEEEVKD 120
V VQEKSPVVEDKPVIQNKPVVVEEKQPIA+DV EVE SHEVRSD K S+PPKKEEEVKD
Sbjct: 61 VAVQEKSPVVEDKPVIQNKPVVVEEKQPIAVDVGEVESSHEVRSDSKQSVPPKKEEEVKD 120
Query: 121 EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV 180
EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV
Sbjct: 121 EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV 180
Query: 181 EDDAEDAQEDLEVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFVGGLDKD 240
E+D EDAQEDLE E+DDQQ GEDHEHAGMVD DEDEH+EVVKERRKRKEFEVFVGGLDKD
Sbjct: 181 EEDVEDAQEDLEGEDDDQQGGEDHEHAGMVDADEDEHHEVVKERRKRKEFEVFVGGLDKD 240
Query: 241 VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNPVINGKQ 300
VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFA+VEEAKRAVSELKNPVINGKQ
Sbjct: 241 VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKNPVINGKQ 300
Query: 301 CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE 360
CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE
Sbjct: 301 CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE 360
Query: 361 FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE 420
FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE
Sbjct: 361 FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE 420
Query: 421 EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGDNKA 480
EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGD+KA
Sbjct: 421 EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGDSKA 480
Query: 481 KVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVPVRGVRGVGSHLPPV 540
KVRARLSRPLQRGKGKHASRADYWPGRTTGR VRGSW RPAPRS+P+RGVRGVGSHLPPV
Sbjct: 481 KVRARLSRPLQRGKGKHASRADYWPGRTTGR-VRGSWARPAPRSIPIRGVRGVGSHLPPV 540
Query: 541 SVKRPSGVRDRRPVIAVPARGRAIAPVARSYDRGPPVASYSKSSLKREYGRREELHPSRS 600
SVKRPSGVRDRRPVIAVP RGR +A VARSYDRGPPVASYSKSSLKREYGRREELHPSRS
Sbjct: 541 SVKRPSGVRDRRPVIAVPPRGRPVAAVARSYDRGPPVASYSKSSLKREYGRREELHPSRS 600
Query: 601 RMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPRRDAPRRAYVDDGYGRRFERPPPASYR 660
RMLVDY+SRVVPERNPSYRDEYASRAAAFSD PRRDAPRRAYVDDGY RRFERPPP SYR
Sbjct: 601 RMLVDYASRVVPERNPSYRDEYASRAAAFSDPPRRDAPRRAYVDDGYSRRFERPPPPSYR 660
Query: 661 DVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGDAYDGRFLV 720
DVRARDYDALIGSKRPYSS+SDVPPAYADAGVRQSRSRLDYDYG GASQYGDAYD
Sbjct: 661 DVRARDYDALIGSKRPYSSMSDVPPAYADAGVRQSRSRLDYDYGTGASQYGDAYD----- 720
Query: 721 GRIGRSNIGGYDSRSSISGSFSSDVSGMYSSSYGGDYMTRGSNVGG-SSYSSMYPGRSVG 780
RIGRSNIGGYDSRSSISGSFSSDV GMYSSSYGG+YMTRGSNVGG SSYSSMYPGRSVG
Sbjct: 721 SRIGRSNIGGYDSRSSISGSFSSDV-GMYSSSYGGEYMTRGSNVGGSSSYSSMYPGRSVG 780
Query: 781 GSSYMGSGGSGSYY 793
GSSYMGSGGSGSYY
Sbjct: 781 GSSYMGSGGSGSYY 787
BLAST of Lsi05G018670 vs. NCBI nr
Match:
gi|449432380|ref|XP_004133977.1| (PREDICTED: nucleolin [Cucumis sativus])
HSP 1 Score: 1393.3 bits (3605), Expect = 0.0e+00
Identity = 746/794 (93.95%), Postives = 762/794 (95.97%), Query Frame = 1
Query: 1 MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVEVETKELREE 60
MPPRTVKRG+ASAG+KRGGR TRGTPKKQDQP EREV EET KVEEVSVVEVETKELREE
Sbjct: 1 MPPRTVKRGSASAGAKRGGRTTRGTPKKQDQPAEREVVEETAKVEEVSVVEVETKELREE 60
Query: 61 VTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSDLK-SIPPKKEEEVKD 120
V VQEKSPVVEDKPVIQNKPVVVEEKQPIA+DV EVE S EVRSD K S+PPKKEEEVKD
Sbjct: 61 VAVQEKSPVVEDKPVIQNKPVVVEEKQPIAVDVGEVESSREVRSDSKQSVPPKKEEEVKD 120
Query: 121 EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV 180
EEYGKDERLDLEDNDPESEP+EDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV
Sbjct: 121 EEYGKDERLDLEDNDPESEPDEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDEEGDMV 180
Query: 181 EDDAEDAQEDLEVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFVGGLDKD 240
E+D EDAQEDLE E+DDQQ GEDHEHAGMVD DEDEH+EVVKERRKRKEFEVFVGGLDKD
Sbjct: 181 EEDVEDAQEDLEGEDDDQQGGEDHEHAGMVDADEDEHHEVVKERRKRKEFEVFVGGLDKD 240
Query: 241 VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNPVINGKQ 300
VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFA+VEEAKRAVSELKNPVINGKQ
Sbjct: 241 VKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFATVEEAKRAVSELKNPVINGKQ 300
Query: 301 CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE 360
CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE
Sbjct: 301 CGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNRGFAFLE 360
Query: 361 FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE 420
FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE
Sbjct: 361 FSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSLPASWDE 420
Query: 421 EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGDNKA 480
EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGDNKA
Sbjct: 421 EFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELGEGDNKA 480
Query: 481 KVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVPVRGVRGVGSHLPPV 540
KVRARLSRPLQRGKGKHASR DYWPGRTTGR VRGSW RPAPRS+P+RGVRGVGSHLPPV
Sbjct: 481 KVRARLSRPLQRGKGKHASRTDYWPGRTTGR-VRGSWTRPAPRSIPIRGVRGVGSHLPPV 540
Query: 541 SVKRPSGVRDRRPVIAVPARGRAIAPVARSYDRGPPVASYSKSSLKREYGRREELHPSRS 600
SVKRPSGVRDRRPVIAVP RGR +A VARSYDRGPPVASYSKSSLKR+YGRREELHPSRS
Sbjct: 541 SVKRPSGVRDRRPVIAVPPRGRPVAAVARSYDRGPPVASYSKSSLKRDYGRREELHPSRS 600
Query: 601 RMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPRRDAPRRAYVDDGYGRRFERPPPASYR 660
RMLVDY+SRVVPERNPSYRD+YASRAAAFSD PRRDAPRRAYVDDGY RRFERPPP SYR
Sbjct: 601 RMLVDYASRVVPERNPSYRDDYASRAAAFSDPPRRDAPRRAYVDDGYSRRFERPPPPSYR 660
Query: 661 DVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGASQYGDAYDGRFLV 720
DVRARDYDALIGSKRPYSS+SDVPPAYAD GVRQSRSRLDYDYGAGASQYGDAYD
Sbjct: 661 DVRARDYDALIGSKRPYSSMSDVPPAYADTGVRQSRSRLDYDYGAGASQYGDAYD----- 720
Query: 721 GRIGRSNIGGYDSRSSISGSFSSDVSGMYSSSYGGDYMTRGSNVGG-SSYSSMYPGRSVG 780
RIGRSNIGGYDSRSSISGSFSSDV GMYSSSYGGDYMTRGSNVGG SSYSSMYPGRSVG
Sbjct: 721 SRIGRSNIGGYDSRSSISGSFSSDVGGMYSSSYGGDYMTRGSNVGGSSSYSSMYPGRSVG 780
Query: 781 GSSYMGSGGSGSYY 793
GSSYMGSGGSGSYY
Sbjct: 781 GSSYMGSGGSGSYY 788
BLAST of Lsi05G018670 vs. NCBI nr
Match:
gi|1009170386|ref|XP_015866171.1| (PREDICTED: nucleolin [Ziziphus jujuba])
HSP 1 Score: 984.9 bits (2545), Expect = 7.9e-284
Identity = 568/824 (68.93%), Postives = 655/824 (79.49%), Query Frame = 1
Query: 1 MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVEVETKELREE 60
MPPRT KRGAASAG++R R TRG K Q+Q E EE VK EEVSV VE KE E
Sbjct: 1 MPPRTAKRGAASAGTRRTPRATRGAAKSQNQQPP-ETHEEPVKGEEVSVPVVEAKE---E 60
Query: 61 VTVQEKSPVVEDKPVI---QNKPVVVEEKQPIAIDVEEVE-PSHEVRSDLKSIPPKKEEE 120
V +++K P+ E+KPV+ + +PVV EK + +D ++ E +SD + KKE+
Sbjct: 61 VKIEQK-PIFEEKPVVVVAEERPVV--EKMTVTVDHQQASYHKEEAKSDPNGL--KKEDN 120
Query: 121 VKD--EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVDGEGEPEDNVGDE 180
+K+ +EY KDERLDLEDN+PE E EE G +YD+KEI+Q++ E+VD E EDNVG+E
Sbjct: 121 MKESVDEYEKDERLDLEDNEPEYEVEEYSGVDYDDKEIDQDEDHEIVDEGDEHEDNVGEE 180
Query: 181 -EGDMVEDDAEDAQEDLEVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFV 240
EGDM E++ ED E+LE EE ++ E+ EH VD +ED+H+E+VKERRKRKEFEVFV
Sbjct: 181 DEGDMAEEELEDVHEELEGEEYEEHVVEEREHVETVDGEEDDHHELVKERRKRKEFEVFV 240
Query: 241 GGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNP 300
GGLDKD E+DL+KVF+AVGEVTEVRLMMNPQTKKNKGFAFLRFA VE+AKRAV+ELKNP
Sbjct: 241 GGLDKDATEDDLRKVFAAVGEVTEVRLMMNPQTKKNKGFAFLRFAKVEQAKRAVTELKNP 300
Query: 301 VINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNR 360
VINGKQCGVTPSQDSDTLFLGNI KTWKK+ALKE+LK+YGVDNVEDLTLVEDSNNEG NR
Sbjct: 301 VINGKQCGVTPSQDSDTLFLGNISKTWKKEALKERLKYYGVDNVEDLTLVEDSNNEGMNR 360
Query: 361 GFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSL 420
GFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVD L
Sbjct: 361 GFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGL 420
Query: 421 PASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELG 480
PASWDE+ V+ +LKKYGEIEKIELARNMPSAKRKDFGF+TFD+HDAAV+CAKSINN+ELG
Sbjct: 421 PASWDEDRVKDILKKYGEIEKIELARNMPSAKRKDFGFITFDSHDAAVTCAKSINNAELG 480
Query: 481 EGDNKAKVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAP-RSVPVRGVRGV 540
EGD+KAKVRARLSRPLQRGKGKH R D+ RAVRGSWGRPAP RS+P+RGVRGV
Sbjct: 481 EGDHKAKVRARLSRPLQRGKGKHVGRGDFRSVHGAARAVRGSWGRPAPPRSLPMRGVRGV 540
Query: 541 GSHLPPVSVKRPSGVRDRRPVIAVPARGRAIAPVARSYDRGPPVASYSKSSLKREYGRRE 600
GS LPP S+KRP G+RDRRPV+++P+RGR +AP RSYDR PV SY+KSSLKREY RR+
Sbjct: 541 GSRLPPPSMKRPVGLRDRRPVMSMPSRGRPLAPPPRSYDRRAPVPSYTKSSLKREYSRRD 600
Query: 601 ELHPSRSRMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPR---RDAPRRAYVDDGYGRR 660
EL P RSR+ DY SR+VPER SYRD+Y+SR +SD PR R A RRAYVDD YG+R
Sbjct: 601 ELPPPRSRVPADYGSRLVPERRTSYRDDYSSRGPGYSDPPRTTSRTATRRAYVDDAYGQR 660
Query: 661 FERPPPA--SYRDVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGAS 720
FERPPP SYR+ RARDYD++ GSKRPYSSL DVPP YADA +RQSR RLDY+YG+ AS
Sbjct: 661 FERPPPPPPSYREGRARDYDSISGSKRPYSSLDDVPPRYADASIRQSRPRLDYEYGSSAS 720
Query: 721 QYGDAYDGRFLVGRIGRSNIGGYDSRSSIS------------------GSFS-SDVSGMY 780
QYGDAY R +GR N+G Y S S S GS+S SDV GMY
Sbjct: 721 QYGDAYGDR-----LGRPNLG-YSSSSRTSQDSHGLYSSSRQGMSYGGGSYSGSDVGGMY 780
Query: 781 SSSYGGDYMTRGSNVGGSSYSSMYPGRSVGGSSYMGSGGSGSYY 793
SSSYGG+Y++RGS+VGGSSY+SMY R VGGS YMGSGGSGSYY
Sbjct: 781 SSSYGGEYISRGSDVGGSSYTSMYSSRGVGGSGYMGSGGSGSYY 809
BLAST of Lsi05G018670 vs. NCBI nr
Match:
gi|645253058|ref|XP_008232407.1| (PREDICTED: nucleolin [Prunus mume])
HSP 1 Score: 979.5 bits (2531), Expect = 3.3e-282
Identity = 563/829 (67.91%), Postives = 653/829 (78.77%), Query Frame = 1
Query: 1 MPPRTVKRGAASAGSKRGGRVTRGTPKKQDQPVEREVAEETVKVEEVSVVEVETKELREE 60
MPPR VKRGAA+AG+KR RVTRGTPK Q Q + ++V VVE + EE
Sbjct: 1 MPPRMVKRGAAAAGTKRTTRVTRGTPKAQSQA-------QAEAPDDVPVVEAKEDLKVEE 60
Query: 61 VTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVEEVEPSHEVRSDLKSIPPKKEEEVKD- 120
V ++ P+V + PV++ KP V++ QP ++E+ + +S+L + KK+++VK+
Sbjct: 61 V---KERPIVAESPVVEEKPTVID--QPGLSEIED-----DAKSELNGL--KKQDKVKES 120
Query: 121 -EEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVD-GEGEPEDNVGDEEGD 180
++Y KDERL+LEDN+ E EPEEDGG +YDEKE+EQEDVQEV D G+ EP +N+G+EEGD
Sbjct: 121 MDDYEKDERLELEDNEAEYEPEEDGGVDYDEKEMEQEDVQEVEDEGDEEPLENLGEEEGD 180
Query: 181 MVEDDAEDAQEDLEVEEDDQQAGEDHEH--------AGMVDVDEDEHNEVVKERRKRKEF 240
M E++ ED E+LE EE ++ AGE+HEH A VD +E+EH+EVVKERRKRKEF
Sbjct: 181 MAEEELEDPNEELEGEEYEEHAGEEHEHEHGHEHEHAETVD-EEEEHHEVVKERRKRKEF 240
Query: 241 EVFVGGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSE 300
EVFVGGLDKD E DLKK F+ VGEVTEVRLMMNPQTKKNKGFAFLRFA+VE+AKRAV+E
Sbjct: 241 EVFVGGLDKDASETDLKKAFAVVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRAVTE 300
Query: 301 LKNPVINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNE 360
LK+PVINGKQCGVTPSQDSDTLFLGNI KTW KDAL+EKLKHYGVDNVEDLTLVED+NN
Sbjct: 301 LKHPVINGKQCGVTPSQDSDTLFLGNISKTWTKDALREKLKHYGVDNVEDLTLVEDTNNV 360
Query: 361 GSNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVF 420
G NRGFAFLEFSSRSDAMDAFKRLQKRD+VFGVDRPAKVSFADSFIDPGDEIMAQVKTVF
Sbjct: 361 GMNRGFAFLEFSSRSDAMDAFKRLQKRDIVFGVDRPAKVSFADSFIDPGDEIMAQVKTVF 420
Query: 421 VDSLPASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINN 480
VD LPASWDE+ V+ LLKKYGE+EKIELARNMPSAKRKDFGFVTFDTHDAAV+CAKSINN
Sbjct: 421 VDGLPASWDEDHVQELLKKYGEVEKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINN 480
Query: 481 SELGEGDNKAKVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVP-VRG 540
+ELGEGDNKAKVRARLSRPLQRGKGKH R DY P R GR VRGSWGRP PRS+P +RG
Sbjct: 481 AELGEGDNKAKVRARLSRPLQRGKGKHVGRGDYRPSRAVGRVVRGSWGRPTPRSLPPLRG 540
Query: 541 VRGVGSHLPPVSVKRPSGVRDRRPVIA-VPARGRAIAPVARSYDRGPPVASYSKSSLKRE 600
+RGVGS +PP SVKRP G+R+RRP ++ PARGR + P ARSYDR PPV +Y KSS KRE
Sbjct: 541 LRGVGSRIPPASVKRPVGLRERRPAMSPYPARGRPLPPPARSYDRRPPVPAYPKSSFKRE 600
Query: 601 YGRREELHPSRSRMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPR---RDAPRRAYVDD 660
YGRR+E+ P RSR+ DY SR VPER SYRD+Y R +SD PR R RRAYVD+
Sbjct: 601 YGRRDEVPPPRSRVAADYGSRAVPERRQSYRDDYTPRGPGYSDPPRSTSRTGGRRAYVDE 660
Query: 661 GYGRRFERPPPAS-----YRDVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLD 720
GYG+R+ER PP S YR+ RARDYD++ GSKRPYS+L DVPP YAD G+RQSR+RLD
Sbjct: 661 GYGQRYERHPPPSHPPPSYREGRARDYDSISGSKRPYSALDDVPPRYADGGIRQSRARLD 720
Query: 721 YDYGAGASQYGDAYDGRFLVGRIGRSNIGGYDSRSSIS--GSFSS--------------D 780
Y+Y +G SQYGDAY R +GRS++G SR+S G +SS D
Sbjct: 721 YEYASG-SQYGDAYSDR-----MGRSSLGYGSSRTSQDSHGLYSSRQGMGYGGGSYGGND 780
Query: 781 VSGMYSSSYGGDYMTRGSNVGGSSYSSMYPGRSVGGSSYMGSGGSGSYY 793
V GMYSSSYGGDYM+RGS+VGGSSYSSMY GR VGGSSYMGSGGSGSYY
Sbjct: 781 VGGMYSSSYGGDYMSRGSDVGGSSYSSMYSGRGVGGSSYMGSGGSGSYY 803
BLAST of Lsi05G018670 vs. NCBI nr
Match:
gi|703074295|ref|XP_010089781.1| (Heterogeneous nuclear ribonucleoprotein Q [Morus notabilis])
HSP 1 Score: 972.2 bits (2512), Expect = 5.3e-280
Identity = 563/822 (68.49%), Postives = 649/822 (78.95%), Query Frame = 1
Query: 1 MPPRTVKRGAASAGSKRGGRVTRGTPKKQD-QPVEREVAEETVKVEEVSVVEVETKE--- 60
MPPRTVKRGA G +R GRVTRG+ K Q+ QP + V E+ V VEEV + E KE
Sbjct: 1 MPPRTVKRGA---GPRRTGRVTRGSQKAQNHQPPD--VPEDPVTVEEVPIRATEAKEDVK 60
Query: 61 LREEVTVQEKSPVVEDKPVIQNKPVVVEEKQPIAIDVE-EVEPSHEVRSDLKSIPPKKEE 120
+ E T++EK P +E+KPV+ N+ + ++VE + EP+ + D K +E
Sbjct: 61 VEAEPTMEEKPPAIEEKPVVVNQLIS-------DLNVEAKAEPNGLEKED------KMKE 120
Query: 121 EVKDEEYGKDERLDLEDNDPESEPEEDGGFEYDEKEIEQEDVQEVVD-GEGEPEDNVGDE 180
V +EY KDERLDLEDN+PE E EE G +YDEKEI+QEDVQEV D GE +PE+N+G+E
Sbjct: 121 SV--DEYEKDERLDLEDNEPEYENEEYVGVDYDEKEIDQEDVQEVGDEGEEDPEENLGEE 180
Query: 181 -EGDMVEDDAEDAQEDLEVEEDDQQAGEDHEHAGMVDVDEDEHNEVVKERRKRKEFEVFV 240
EGD E+ E+LE EE ++ AGEDHEH D DEDEH+EVVKERRKRKEFEVFV
Sbjct: 181 DEGD------EEELEELEGEEYEEHAGEDHEHVEHADADEDEHHEVVKERRKRKEFEVFV 240
Query: 241 GGLDKDVKEEDLKKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFASVEEAKRAVSELKNP 300
GGLDKD E DL+KVFSAVGEVTEVRLMMNPQTKKNKGFAFLRF++VE+AKRAV+ELKNP
Sbjct: 241 GGLDKDATEGDLRKVFSAVGEVTEVRLMMNPQTKKNKGFAFLRFSTVEQAKRAVTELKNP 300
Query: 301 VINGKQCGVTPSQDSDTLFLGNICKTWKKDALKEKLKHYGVDNVEDLTLVEDSNNEGSNR 360
VI GKQCGVTPSQDSDTLFLGNICKTW K+ALKEKLKHYGV+NVED+TLVEDSNN+G NR
Sbjct: 301 VIKGKQCGVTPSQDSDTLFLGNICKTWSKEALKEKLKHYGVNNVEDVTLVEDSNNDGMNR 360
Query: 361 GFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDSL 420
GFAFLEFSSRS+AMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVD L
Sbjct: 361 GFAFLEFSSRSEAMDAFKRLQKRDVVFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGL 420
Query: 421 PASWDEEFVRGLLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVSCAKSINNSELG 480
PA+WDE+ VR LLKKYGEI KIELARNMPSAKRKDFGFVTFDTHDAAV+CAKSINN ELG
Sbjct: 421 PATWDEDRVRWLLKKYGEIVKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNVELG 480
Query: 481 EGDNKAKVRARLSRPLQRGKGKHASRADYWPGRTTGRAVRGSWGRPAPRSVPVRGVRGVG 540
EG NKAKVRARLSRPLQ+GKG+H +R D+ R +GR V+GSW P+PRS+P+RG+RG G
Sbjct: 481 EGGNKAKVRARLSRPLQKGKGRHVARGDFRSSRGSGRVVKGSWSHPSPRSLPMRGLRGAG 540
Query: 541 SHLPPVSVKRPSGVRDRRPVIAVPARGRAIAPVARSYDRGPPVASYSKSSLKREYGRREE 600
S +PP SVKRP+G RDRRPV++VP R R +AP ARSYDR PV+SY KSSLKREY RR+E
Sbjct: 541 SRIPPPSVKRPAGFRDRRPVMSVPVRARPLAPPARSYDRRAPVSSYPKSSLKREYSRRDE 600
Query: 601 LHPSRSRMLVDYSSRVVPERNPSYRDEYASRAAAFSDQPR---RDAPRRAYVDDGYGRRF 660
+ P RSR + DY SRVV ER PSYRD+Y+SRA+ +SD PR R + RRAYVDDGYG RF
Sbjct: 601 ILPPRSRAVADYGSRVVHERRPSYRDDYSSRASGYSDPPRSTSRTSARRAYVDDGYGPRF 660
Query: 661 ER----PPPASYRDVRARDYDALIGSKRPYSSLSDVPPAYADAGVRQSRSRLDYDYGAGA 720
ER PPP SYR+ RARDYD++ GSKRPYSS+ DVPP YADA VRQSR+RLDY+YG+G
Sbjct: 661 ERPPPPPPPPSYREGRARDYDSVSGSKRPYSSMDDVPPRYADASVRQSRARLDYEYGSGG 720
Query: 721 SQYGDAYDGRFLVGRIGRSNIGGYDSRSS--ISGSFSS--------------DVSGMYSS 780
S YGDAY R+GRSN+G SR+S G +SS D GMYSS
Sbjct: 721 SHYGDAYG-----DRLGRSNLGYGSSRTSQDSHGLYSSRQGMGYGEGSYGGGDAGGMYSS 780
Query: 781 SYGGDYMTRGSNVGGSSYSSMYPGRSVGGSSYMGSGGSGSYY 793
SYGG+Y++RG +VGGSSYSSMYPGR +GGSSYMGSGGSGSYY
Sbjct: 781 SYGGEYISRGPDVGGSSYSSMYPGRGMGGSSYMGSGGSGSYY 791
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
HNRPQ_HUMAN | 6.8e-33 | 32.90 | Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens GN=SYNCRIP PE=1 SV=2 | [more] |
HNRPQ_MOUSE | 8.8e-33 | 32.90 | Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus GN=Syncrip PE=1 SV=2 | [more] |
HNRPQ_RAT | 8.8e-33 | 32.90 | Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus GN=Syncrip PE=2 S... | [more] |
HNRPR_HUMAN | 1.5e-27 | 32.03 | Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens GN=HNRNPR PE=1 SV=1 | [more] |
RBM47_CANLF | 4.0e-25 | 34.41 | RNA-binding protein 47 OS=Canis lupus familiaris GN=RBM47 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L6P0_CUCSA | 0.0e+00 | 93.95 | Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129610 PE=4 SV=1 | [more] |
W9QJ30_9ROSA | 3.7e-280 | 68.49 | Heterogeneous nuclear ribonucleoprotein Q OS=Morus notabilis GN=L484_008031 PE=4... | [more] |
D7SM13_VITVI | 2.7e-278 | 68.67 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01160 PE=4 SV=... | [more] |
V4U933_9ROSI | 1.6e-275 | 69.11 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018944mg PE=4 SV=1 | [more] |
G9I823_CITSI | 1.6e-275 | 69.11 | RNA recognition motif protein 1 OS=Citrus sinensis GN=RRMP1 PE=2 SV=1 | [more] |