Lsi05G018470 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi05G018470
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr05 : 25709500 .. 25710698 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACGGGTCGGGCATGAATGTGAACATTGATGGTGTCAAACCGACCCAAACAGGACAAGAAGAAGAACAACTATCTTCATCGCTTCGCTTGTGCTTAACACAGCCAATTTCCCCGCGAATCTGCGCATGCCGGAATATAGAAATCCAAGAATTCGATTCAGTTTCTTCCACCATCTTCCAGATCACCAGTGTTTGAACTTGCCAACTGTTCGATTGTTAACGAATTGACGATCGAAATCGAAGCAGAATCTCCGACTTTGTGCAGTGCACACACTTCATCCCTCAACCATGAGAAGGTTGTTTTTGGATCTTCGGTTGCTCATACATTTGTCTCATTCAGGTTGTGATGTTTTCTCGTTGTCTTAGAATTTGAAATTTCCATTTCCTTCGCTGCAGATCGGGGCACCATTTACATCGGCCCCATGTGAAGCAAGGTGCAGGAGGATTGAAGGGCATGATAGGGAGGTTATCAATCGCTGTGGTTGTTCTCTTGATCTGCACAGTTTCATTGTTTGTTTCATCGACTAGCAAAGGTGGCTTTCGATCCGTCTCTCGCTCTGAGGTTAGTTGAGGCTGAGCTCGTTGCGTGTGATTATTTGCTGTTTATGTCCGCTGTTGCGAGAGTGTTGAATTAGAGCTCTAGAGTTGCAGTATCATAGTTAATTCCATGAAATTGATTATGTTCATTCTTCTCGCGAAATATAGGAAAAATGTATGTCACCCCATTATTTTAATGCTGGAATTTCGGGATAATCTCAATTCGTTTTCCTGAAACAATTTCAAAGTCCGAGGACACTATAACTGTTCTCTATCGAATTTATTTCTCAGCAGTGAATCACGACCACATTGTAGTTTTAAAATGAAGTGTAAGAGTGGTTACCTTACATTGAAAAAAAAAGAAAGATCTGATGCCGTTTTAACTGAGAACTGCATCGGGTAATTTTCTTATCCTTAAGAATTACGATGGCAAAGAGAAAGCTATCTCGCATGAGCTAGTTTCTGGACACATGGAGGAGGTGGTAGGTAAAGCTATTGTGGCAGTGTATGAATATTTCAACACGATGGAAATTTGACATTTCATTCTATTCTTGGTTGGCCAGATCAAGGCTGAAGAACTTTGGAACCGTGCTGATTCTGGTGGCTGGAGGCCTTCCTCAGCTCCGCGGTCGGATTGGCCACGTATTTCTTTGTTGCCTTTAA

mRNA sequence

AACGGGTCGGGCATGAATGTGAACATTGATGGTGTCAAACCGACCCAAACAGGACAAGAAGAAGAACAACTATCTTCATCGCTTCGCTTGTGCTTAACACAGCCAATTTCCCCGCGAATCTGCGCATGCCGGAATATAGAAATCCAAGAATTCGATTCAGTTTCTTCCACCATCTTCCAGATCACCAGTGTTTGAACTTGCCAACTGTTCGATTGTTAACGAATTGACGATCGAAATCGAAGCAGAATCTCCGACTTTGTGCAGTGCACACACTTCATCCCTCAACCATGAGAAGATCGGGGCACCATTTACATCGGCCCCATGTGAAGCAAGGTGCAGGAGGATTGAAGGGCATGATAGGGAGCAGTGAATCACGACCACATTGTAGTTTTAAAATGAAGTGTAAGAGTGGTTACCTTACATTGAAAAAAAAAGAAAGATCTGATGCCGTTTTAACTGAGAACTGCATCGGATCAAGGCTGAAGAACTTTGGAACCGTGCTGATTCTGGTGGCTGGAGGCCTTCCTCAGCTCCGCGGTCGGATTGGCCACGTATTTCTTTGTTGCCTTTAA

Coding sequence (CDS)

ATGAGAAGATCGGGGCACCATTTACATCGGCCCCATGTGAAGCAAGGTGCAGGAGGATTGAAGGGCATGATAGGGAGCAGTGAATCACGACCACATTGTAGTTTTAAAATGAAGTGTAAGAGTGGTTACCTTACATTGAAAAAAAAAGAAAGATCTGATGCCGTTTTAACTGAGAACTGCATCGGATCAAGGCTGAAGAACTTTGGAACCGTGCTGATTCTGGTGGCTGGAGGCCTTCCTCAGCTCCGCGGTCGGATTGGCCACGTATTTCTTTGTTGCCTTTAA

Protein sequence

MRRSGHHLHRPHVKQGAGGLKGMIGSSESRPHCSFKMKCKSGYLTLKKKERSDAVLTENCIGSRLKNFGTVLILVAGGLPQLRGRIGHVFLCCL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G018470.1Lsi05G018470.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G018470Melon (DHL92) v3.6.1lsimedB396
Lsi05G018470Silver-seed gourdcarlsiB156
Lsi05G018470Silver-seed gourdcarlsiB206
Lsi05G018470Silver-seed gourdcarlsiB878
Lsi05G018470Silver-seed gourdcarlsiB983
Lsi05G018470Cucumber (Chinese Long) v3cuclsiB220
Lsi05G018470Cucumber (Chinese Long) v3cuclsiB228
Lsi05G018470Watermelon (97103) v2lsiwmbB333
Lsi05G018470Watermelon (97103) v2lsiwmbB341
Lsi05G018470Watermelon (97103) v2lsiwmbB347
Lsi05G018470Wax gourdlsiwgoB421
Lsi05G018470Wax gourdlsiwgoB445
Lsi05G018470Wax gourdlsiwgoB462
Lsi05G018470Bottle gourd (USVL1VR-Ls)lsilsiB011
Lsi05G018470Cucumber (Gy14) v1cgylsiB415
Lsi05G018470Cucurbita maxima (Rimu)cmalsiB245
Lsi05G018470Cucurbita maxima (Rimu)cmalsiB356
Lsi05G018470Cucurbita maxima (Rimu)cmalsiB487
Lsi05G018470Cucurbita maxima (Rimu)cmalsiB586
Lsi05G018470Cucurbita maxima (Rimu)cmalsiB762
Lsi05G018470Cucurbita maxima (Rimu)cmalsiB764
Lsi05G018470Cucurbita moschata (Rifu)cmolsiB233
Lsi05G018470Cucurbita moschata (Rifu)cmolsiB345
Lsi05G018470Cucurbita moschata (Rifu)cmolsiB471
Lsi05G018470Cucurbita moschata (Rifu)cmolsiB566
Lsi05G018470Cucurbita moschata (Rifu)cmolsiB757
Lsi05G018470Cucurbita moschata (Rifu)cmolsiB823
Lsi05G018470Cucurbita pepo (Zucchini)cpelsiB506
Lsi05G018470Cucurbita pepo (Zucchini)cpelsiB714
Lsi05G018470Wild cucumber (PI 183967)cpilsiB124
Lsi05G018470Wild cucumber (PI 183967)cpilsiB128
Lsi05G018470Wild cucumber (PI 183967)cpilsiB201
Lsi05G018470Wild cucumber (PI 183967)cpilsiB207
Lsi05G018470Cucumber (Chinese Long) v2culsiB209
Lsi05G018470Melon (DHL92) v3.5.1lsimeB360
Lsi05G018470Melon (DHL92) v3.5.1lsimeB378
Lsi05G018470Watermelon (Charleston Gray)lsiwcgB335
Lsi05G018470Watermelon (Charleston Gray)lsiwcgB343
Lsi05G018470Watermelon (Charleston Gray)lsiwcgB349
Lsi05G018470Watermelon (97103) v1lsiwmB360
Lsi05G018470Watermelon (97103) v1lsiwmB365
Lsi05G018470Cucumber (Gy14) v2cgyblsiB114
Lsi05G018470Cucumber (Gy14) v2cgyblsiB194
Lsi05G018470Cucumber (Gy14) v2cgyblsiB196