Lsi05G016750 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi05G016750
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr05 : 24355211 .. 24360083 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTAAATTGGAATGAAGCCTTTTGAAAGCAACCGAGCCATTCACGTACTCATACATTTTCACAATTCAATAAATTCTCAAATAATTCCCATCTTAAATGCATCATTTCGTTTTCTACAACCAAATTTTATATTTATTTGAGAAACATCAACAAAATTCAACATGCTAAAATATAAATTTATAGTTTTTTCATGAATAATTAGCGTGTGTTCAACATAAATATTATATTGTAATTCTATAATTGATAAGGATACAGTCCTAAATATTAAAAATAAATTTTAAAATTTTAAAATATACGCTCCTAAACAAATTAAACAAAATAAATGGTACGATAGGACAATATTAAAAATATTAGCATATATAGCAATATTTTTAAAAAATTGCAAATATAACAAAGTCTATCAATGATAAACTTTCATTGTTGATAGACTTTTATGGTCTAGGTGGTTTATCACTGATAAACTCTAGCGATAGAAGTCTACCACTGATAAGTTTTGCTATATTTGCAATTTTTTTAAAATGTTGATGTACACTTAATTATCATCCATAAAATTATTTCTTAGTATAATTACCCTTATATGATTTAGAAAAAATATATAAAATCTATAATTCTATTCATGGATTGTGTGATGAATAAATTTAAAAAAAATTAAAGTATTTTTTCTTTCTTGTTTTGTGTTATGAAATACATATCTAAAAATAAAAGGAGTGAAAACATATATGTGGTCTACATTAAATCCTTTTGTTTTCTAAGTTATTGATTTTGGACCAACCCATCATTAAAAGTCTTTCCCCAATTGCTCATCATTGGTCCATCTGTCTTCAACTTGGCACATTCCAGTTCAGCTTCTCACTGCCCTATGCCCCAATGGTAATATTTCTTAGCTTTAAATACCATTAATTACCATTTTGCTTTATCTACCTTATATTTCATTTTATTTTAGTAAAATTCAAATTTAATTTTAAATTCAATAAATCTTTGATTTAATTGTTTAAATTAATTTTTTTATTAAAATTGATTAAATAATAATAATAATATTTTGACAATAAAATACATTATGTAAATATATTTCTAAACTTTATAATGTGTTAAAAGAAAAGGTTCAACAATAAATTAATAGGAGTGATTTTAAGATTTAATGAAAATATAGAAGCTAAAATTAGACATTTGAAACTTGAGAGTAAATGTACTCAATGGAACTTTAACATATTTTAGTGATAATAATTTGATTTTTTATTTTTTATTTTTAAAAATCGTGCTAACTATTTTTTCATGGTGATTTTCATCCATTTTAAAAGAAGTATTTAAAGTCTCGGGAAAATTTTAAAAATATAAGAATAAGGGAAACTATTTACACAAAATAGCAAAATTTTTAGATAGTTGTGATAGACGCTGATAGAAATTATAGATATTGATAGAAGTCTATCAATGTTTTTTTCTTCTATTTTTTATAAATAGTTTGACATTTTTTTTACTTGTGAAAATTTGTCTAAAAAATAAAACAGGTTGAAAACTACATTTATAAATTTTAAAATTTGACTTGAATTAAAAAAAAAAAGATATATATATTAAAAAGAAAATAACAAAAAAGGGTTGTTTTCAAATATAGAAAAATTAGTCAAATTATTTATAAATATAGAAAAATTTTACTGTCTATCAACGATAAACCGCTACATAATTCTATCACTTGAGCGATAGAATTTTATCTATATTTATAAATAGTTTAATATTTTTTCTGTTTAAAGTAATTTTTCAAAAATAAATCATAAGTATAAATTAACTTTATTAAACCATTCAACTTCGTCTTAAATAAATAAAAATGACTTTACTTTGGGTGAGAGATAATGGGCACAAGATCATTAATGGGCGCTAGGATTATCGCCAAACACAATGTCAAATTTTATGAAGCGGTACCCAAAAAAAATCCTAAAAATAATCATCTAGCCCACATTTGTTTCATCTTATCTAATTTGTTTAGCTAGACAGGGAAGATACTTAACATTAAAAAAAAAAAATGTTTTACAAATTTTTTTTAAAAGATTATATATATATCCACTTTGACATTCCTTTATTTATTTTTACTAACGTTATTGAAGACTGAACTAAATGGAAAACTTTTGGTATATAAAATTGGAGAAAATAAAAGTATATATTTGTAGATTTCTTTTAAATAAAAAAATCAAATCAAAACTTTTGATTAGTAATATAACTTTAGTACTGTGTGTTTGGGATTTTTTTTTCATAGCTTAAAAAAAAGATAAATTATTATAAACAAAAAAAAAAATATCAAACTATTTACAAATATAGAAAAAATTTCACTATCTATCAGCGATAGACCGCGATATAATTCTATCGTTTGAGCAATAAACTTCTATTGTGGTCTATCACTATAGACAATAAATAGTTTGATATTTTTTATATTTATAATAATTTATTTTTTTACACATATATATATATTTACATTATATAATTAAAATAAATATTGGCAACTATATATATATCATATGTTTTTGCTATATTGCAATTCTTATTACTTCTTAACAAGATTTTCAAATTTTAATTTAAATTAATATTTATTTTATAAAAAATCTTAAAATTAATTGATAAAAACAATAATATAAACTGTTTTAATTTAAAAAGAAAATTAATTGGTAAAAACAATGTTATATAAGTTCAAATTATATCAAGTTAATTATAAATTAATAAATAGTAATAAGGATATTATGGATACATTAGGTAAATTTAAGACCTTTTATAGTAGAAATCCTACAAAACAAACACAGTCATCAAAATATTCTTAGATATCAAATAATGTAATCTAAAGATACAGAACACCTATAATTTTATAAATCTATCATTTTTGTCATCTAAAGTTTCAATTATCTACCTTCCAAACAAATTACACTGACAGTAATAATAGAAAACAAAAAGTTGGAAATATTTGTTTTCACCATATTTAATATTTGGCATTTCAAGATGGAGTTCTGTTCAATTTCGAACCATTTGTGAAATTCGATGAAGACTTGGTGGTTCATACGATCTTGACCTTTCTTATTAGCAAAAATAAAATGGCCTCCCAATTTTGATCTAAAATATAATTATTTATTAAATGAAAAATGACACATCGTTAGACATATCTACAAGCTACTCTTTTTCATATATGACTGTTAAAATAATATACTCCAACCAAATTTATCCTTTTCTTTTTCCTTTACCTAAATAATCTTAATGATTTCTCAATATATCTCAAATTAACTATATATATATATATATATATAGTATGAATTTCATTTTTAATATTCCATTTCTTTCTATCAACTTTCAATTTTAAAATCTTGCAAAAAAAATATTTTTTGTATCATCAACTTTTCATTTATCATTTAACACCAATCGAGTTCTACTTGTTAATTGAAGCTTCACTCACTACACGTGACTTTAAACATTATTCAAATAGAGACATTGATTTGACGAATATATGTGTGTCCTAGTCAAATTCATACCAAACAAATTATTAAAATTTAATGACAAAATTAAAGTAAAAATAAACTTCAATAAGACTTTAATTTTTGTAATATTATATTTCAATGTCAACATTATTTTAACTACAAAACTCCTTGAGAACAGATAACATATATAGTTAATATGGGAGTAATCTTTCTATTATTGGTTAGAAAACAAGGCTACCTTTTTGGAACTACAATGTTTCTTTTTGACTCCAAAGTCCATTAAATAATCTCAATCCCAAATCACTTTTACTTTTTTTTTTATCTTGATTATCCTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCTTGGTGATGAAGCGAACACCCAACAACTGAGCATAAACAGTAGCGCTAAGCGCAATTGGCAGGCAATACAGTTGCGCACATAA

mRNA sequence

ATGGCTTTATTGATTTTGGACCAACCCATCATTAAAAGTCTTTCCCCAATTGCTCATCATTGGTCCATCTGTCTTCAACTTGGCACATTCCAGTTCAGCTTCTCACTGCCCTATGCCCCAATGACTGAACTAAATGGAAAACTTTTGGTATATAAAATTGGAGAAAATAAAACGAACACCCAACAACTGAGCATAAACAGTAGCGCTAAGCGCAATTGGCAGGCAATACAGTTGCGCACATAA

Coding sequence (CDS)

ATGGCTTTATTGATTTTGGACCAACCCATCATTAAAAGTCTTTCCCCAATTGCTCATCATTGGTCCATCTGTCTTCAACTTGGCACATTCCAGTTCAGCTTCTCACTGCCCTATGCCCCAATGACTGAACTAAATGGAAAACTTTTGGTATATAAAATTGGAGAAAATAAAACGAACACCCAACAACTGAGCATAAACAGTAGCGCTAAGCGCAATTGGCAGGCAATACAGTTGCGCACATAA

Protein sequence

MALLILDQPIIKSLSPIAHHWSICLQLGTFQFSFSLPYAPMTELNGKLLVYKIGENKTNTQQLSINSSAKRNWQAIQLRT
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G016750.1Lsi05G016750.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G016750Cucumber (Gy14) v1cgylsiB208
Lsi05G016750Cucumber (Gy14) v1cgylsiB415
Lsi05G016750Cucumber (Gy14) v1cgylsiB620
Lsi05G016750Cucurbita maxima (Rimu)cmalsiB010
Lsi05G016750Cucurbita maxima (Rimu)cmalsiB245
Lsi05G016750Cucurbita maxima (Rimu)cmalsiB356
Lsi05G016750Cucurbita maxima (Rimu)cmalsiB764
Lsi05G016750Cucurbita maxima (Rimu)cmalsiB839
Lsi05G016750Cucurbita moschata (Rifu)cmolsiB233
Lsi05G016750Cucurbita moschata (Rifu)cmolsiB345
Lsi05G016750Cucurbita moschata (Rifu)cmolsiB757
Lsi05G016750Cucurbita moschata (Rifu)cmolsiB823
Lsi05G016750Cucurbita pepo (Zucchini)cpelsiB267
Lsi05G016750Cucurbita pepo (Zucchini)cpelsiB506
Lsi05G016750Cucurbita pepo (Zucchini)cpelsiB714
Lsi05G016750Wild cucumber (PI 183967)cpilsiB125
Lsi05G016750Wild cucumber (PI 183967)cpilsiB207
Lsi05G016750Cucumber (Chinese Long) v2culsiB127
Lsi05G016750Cucumber (Chinese Long) v2culsiB209
Lsi05G016750Melon (DHL92) v3.5.1lsimeB360
Lsi05G016750Melon (DHL92) v3.5.1lsimeB378
Lsi05G016750Watermelon (Charleston Gray)lsiwcgB331
Lsi05G016750Watermelon (Charleston Gray)lsiwcgB335
Lsi05G016750Watermelon (Charleston Gray)lsiwcgB343
Lsi05G016750Watermelon (Charleston Gray)lsiwcgB349
Lsi05G016750Watermelon (97103) v1lsiwmB359
Lsi05G016750Watermelon (97103) v1lsiwmB365
Lsi05G016750Watermelon (97103) v1lsiwmB382
Lsi05G016750Cucumber (Gy14) v2cgyblsiB115
Lsi05G016750Cucumber (Gy14) v2cgyblsiB119
Lsi05G016750Cucumber (Gy14) v2cgyblsiB196
Lsi05G016750Melon (DHL92) v3.6.1lsimedB375
Lsi05G016750Melon (DHL92) v3.6.1lsimedB380
Lsi05G016750Melon (DHL92) v3.6.1lsimedB396
Lsi05G016750Silver-seed gourdcarlsiB206
Lsi05G016750Silver-seed gourdcarlsiB210
Lsi05G016750Silver-seed gourdcarlsiB878
Lsi05G016750Silver-seed gourdcarlsiB983
Lsi05G016750Cucumber (Chinese Long) v3cuclsiB139
Lsi05G016750Cucumber (Chinese Long) v3cuclsiB228
Lsi05G016750Watermelon (97103) v2lsiwmbB327
Lsi05G016750Watermelon (97103) v2lsiwmbB333
Lsi05G016750Watermelon (97103) v2lsiwmbB341
Lsi05G016750Wax gourdlsiwgoB421
Lsi05G016750Wax gourdlsiwgoB467
Lsi05G016750Bottle gourd (USVL1VR-Ls)lsilsiB011
Lsi05G016750Bottle gourd (USVL1VR-Ls)lsilsiB056
Lsi05G016750Bottle gourd (USVL1VR-Ls)lsilsiB157