Lsi05G015500 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTAAAATAAGAAAAGGCCCGGAAAAGTACAACTTATTAAAGGCAGCTTTAAACGTTCTCACCTGCAAAGCAACCACTTCATTTCTTCTTTCTCCAGCCAACAATGGCGGAACTCAGCTTCTTCGTCGGCATAATAGGTCGGCCTTCTCTTCTTCTTCTCTCTCTCTCTCTCTCTCTCTTTCTTTATTCTCAATTGATAAAGAATCTGATCGAGTTTTCTGTTGAAAATGACCAGGAAACATTATCTCCGTCCTCATGTTCCTTTCTCCGGCGTAAGCTTTTCGACTTCGATACTTTCTGGAATTTCATTGAGAGATTTTGGATTTTTTATTCATGAATCTTGTTAAACGAATTATTGCAGGGGAACATTCCGGCGGATTATGAGGAATAAATCGACGGAGGAGTTCGAGAGTTTTCCGTATGTATGCACATGGCTGAACTCCGCTCTCTGGACTTACTACGGAATTATCAAGCCTGGCGCCTACCTCGTCGCCACTATCAATTCCTTTGGCGTGGTTGTACAGTCATTTTTCCTCGGTGTTTTCCTCATCTACGCACCTTCCGCAATGAAGGTATCAGATATTGTTGAAATTAAGATACATAAGCAATAATAATAATCTGTGCGTTTAGGACTGTGATCGGAAATAATGGAGATGGATTAATGTGATTTGCAGGCGAAGACAGGGATTCTGGTAGGGATTTTGGATATCGGAATGTTGACGGCGGCGATTGCAGTGAGTGAATTGGTATTGGAAGGCGAAAAGCGTATTGGACCTCTAGGGTTTGTTTGTGCCGGACTGAATATCATGATGTACGCCTCGCCGCTGTCTGTCATGGTAAGATCGTGCTGCAACTTGGAGCTCTTTCTGTCTGTCCTTTCAATCACCGAGAAGCTTCTATTTTTTTCTTTTTCTTTTTAATTATCTCCCTCTTTATTTATTTTGGCTAAAAATAATCCTACAATTTCAAAAAGTTTTAAGTTTAAGCGCTTTTTTTTTTTTAAAAAAAAAAACAAAATCTCATTAAGTTTCAAAATCAAAATCTTCTTTCAAAACTCAACAAAACTATTAATTGCCAAATACAATTTAAAAGAGCCAACGGAGATATATATATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCGTCACGTCACGTCCACCATTTGCTAGATTATTTTTCAATTGTTTTTCTTTTTCCTTTTAAATTTCACACACGGCTTTAATTTTTAAATCTCAACTCAAAGTCAAAGGCAAATGATGATTGAAATTTGAAATCACAAAATTATATATGTTGTATTTTTCACGCGATGGGACTTTTATTTTCTAATTCCCACCAGTTACGTCCAAGGCACTTTTGTATAATAAAATAATTATGTTTTATTTAAATATCATAAAATTATATATCAATATTATTTCCACTTTCTTTTTCTAAGTTAAAAATTCAAACATGTTTTAATCACTGCTTCTAATTAAAAGAAGAAAACATTGGTTTAGCACTTTAGTAACATTATAACAATTTATTTTATCTACTATGCATTAATTGTTATTTTTTTAGTATCAATAATTATGTATTTATTATATAAATTAAATATACAATTGTAGAAGTTAGAAAGAGATGCAAGAGAGCTAAAATTAGAATGAAAGGGATAGCTTAACTGGTAAGTTAGAAAAAGAAAGATTAAATTATACAAAATTCCTATGAATTATGAATTATGGAGTAGATTTTAATTATACCCTTAGATGGTAAAAGGTTTCATTTTATCTTTAAACTTTAAAATATTTTTAAACTATATGCTTTTCATTAAAACAAAAGATGAAAATTGACATCACAATTAATGTTTATAAAATTAGAAGGTGCACGTGATATTATTTACAACATATAACAGATTGAAATCATTGTTATCATTTATTTTATCACACAAGATATCATTAAAATTATTTATATAGTTGATTTTTTGTGCATCTACTATCACGTTAATCTATAGTAATGATGTCATCACATATGCTTTAATTTGTTCATATTATTTGTTGCATTAAATTTCCATCTTATTTTAATGAAAAATACTCGAGAATATTTTTGTAACACAATTTCAAAATTTAAGTATAAAAACCAAACTTTACATCTTGCTGAATGAGGACATATATAGAATGTTACACAAAAGGAAATTATAGGATGCAGTTCAGATTGGGCTCTTGGCCCATTTGGATTGGTTTTTGACTAAGATGTTTTGGTTTGATTAATTGATTATGGTCATTGAACAATAGGCCTCCTAATTTCAAATTAGGGTTGTTTTTTTCTTTTTTTTTTTTTTGGACAGAATTAGGGTTAGGTAATTTGATGGGTCAGAATAGACATGGTTCGTACATCAAATCAATTAAGTAATGCTTTTGTTTTATTTATTTTTATTAGAAAAACATATATTTAATCAAACAATAATTTAGTTATTTATTTTATACCATAATAAAATTTTATAAGCTAACACAAATATAACTCAACTTATTAATATATTGTTGTATGGATTTCGTCATATGCAGAAAACGGTGATAAAGAGTAGGAGTGTGGAGTACATGCCTTTTATGCTATCACTTTTCTTTTCTCTAAATGGAGGAATCTGGACTTTCTATGCTTTTCTCGTGCGTGACTGGTTTCTTGCGGTAAGTTCTTTAATTTAATCGCTAATAAACAAAAATCTAACATTTACATAAAATAAATAATCATGCATAACAATCCATTTCTGAAACTGTTTTTTTGTATTTATTAGATATGTTCTTCTTAATTAGTGAAATTATAGATATGGTTTTAATCGAAACTGTTTTTAGAAATTAAGTTTACGATATTTATATATTTATCTATGCGTTTTTTTAGGTCAAAATTTTTATTTTTTTAACCTTTTAATTTTAAATCATAATGTCATAAACAGAGCTTTATATCTAAGTTTTATGGTATTCATTTTGAAAATATTAAATACACTCCTAGAATCTTACTCAAATTTCAGATAATTTTTTTTAATAAAAGTTTTTGTTTATTCTAGACAATAATATTAAGAAGAAGAAGATATGTCTATGATTTTAGAAAGGAAAGAAAATTAAAGTTCACCCCTAATTAATTAAACTCTACCATGAATATCCATTGGCATCCTAAAAAATTAAAATTTATCAATTGGCACCTTAGAATTTGGATAAATGTCACAATTTTTATCTTGAACTTGTAATTCTTACTTTCAAATAGTTTCATTGTTAAAAGTATATATTCTTTTCATGTGCATAAATAAAAGTATTCATTAGATACGAAATCGATTGGATTTAAAGGAAAATAGTATTAGAGTTGATTTTCTCTGAAATTTGTGAGTTATGAAAGGTTCAATATTGTGCACAAGAATTTTTTTTATTTTCTTTTTTAAAATTAGCGTAGAAATAATGAATACCGAAGTTAAGGTAAAATTAAATCTGTAAAAATATTTGTCTAAGTCTTAAAGATCCGTTTTTAGATTAAAAAGGATACAAATTATCACATTATTAGGCTTTTAAAAATTATTTAGAAAAAACAAAAACCATATCCAAGTGAGTGTGACCGTATAAGAATGATATTCAAAATAAACTTATATTCAATATGGCCTTTATTTAATACATAAAGAAATAAAATATATATAAATTTTATTTAATGGAATAATAATTGAAAAATGGTGAATGCAGGTACCAAATGGAATGGGTTTAGGGTTGGGATTGGCACAACTTTCGCTATATGCAATTTACAGAAATGCCAAAAAGCAATTATTGCCATTAAACACTTCAATAATCACATCACAAAAACAACCCCTTATTTCTTCTTCAGATCCACAACCACAACCCTAATTTTTCAAACATGCCTTATAAATAATTTATATATATTTTAGTTTTATTTTGTATTTTGTATCAATTTTTTCTTTATTATTTTTTAAAGAATTTGAGTGTGCTTTACTTTTATACATAATGTAAGAGTTTGAAGGATACGACATCATCAAATTGAGTTGTGATTTTGGAGTTAATTAATTTATTTAATATCTTTTCTCTTTATTTTTTAAGGAGTGTTTGGCTTAAAAATGAGTGTTTTGTATTTTAGAGTTCAAAATAAATCACAATCTATGTGTTCATATAATCAATCAATCACATGAACTATGTGTACTAGTCGAGTGAGTTATATATAAAACTCACATTCTATATATAGG ATTAAAATAAGAAAAGGCCCGGAAAAGTACAACTTATTAAAGGCAGCTTTAAACGTTCTCACCTGCAAAGCAACCACTTCATTTCTTCTTTCTCCAGCCAACAATGGCGGAACTCAGCTTCTTCGTCGGCATAATAGGAAACATTATCTCCGTCCTCATGTTCCTTTCTCCGGCGGGAACATTCCGGCGGATTATGAGGAATAAATCGACGGAGGAGTTCGAGAGTTTTCCGTATGTATGCACATGGCTGAACTCCGCTCTCTGGACTTACTACGGAATTATCAAGCCTGGCGCCTACCTCGTCGCCACTATCAATTCCTTTGGCGTGGTTGTACAGTCATTTTTCCTCGGTGTTTTCCTCATCTACGCACCTTCCGCAATGAAGGCGAAGACAGGGATTCTGGTAGGGATTTTGGATATCGGAATGTTGACGGCGGCGATTGCAGTGAGTGAATTGGTATTGGAAGGCGAAAAGCGTATTGGACCTCTAGGGTTTGTTTGTGCCGGACTGAATATCATGATGTACGCCTCGCCGCTGTCTGTCATGAAAACGGTGATAAAGAGTAGGAGTGTGGAGTACATGCCTTTTATGCTATCACTTTTCTTTTCTCTAAATGGAGGAATCTGGACTTTCTATGCTTTTCTCGTGCGTGACTGGTTTCTTGCGGTACCAAATGGAATGGGTTTAGGGTTGGGATTGGCACAACTTTCGCTATATGCAATTTACAGAAATGCCAAAAAGCAATTATTGCCATTAAACACTTCAATAATCACATCACAAAAACAACCCCTTATTTCTTCTTCAGATCCACAACCACAACCCTAATTTTTCAAACATGCCTTATAAATAATTTATATATATTTTAGTTTTATTTTGTATTTTGTATCAATTTTTTCTTTATTATTTTTTAAAGAATTTGAGTGTGCTTTACTTTTATACATAATGTAAGAGTTTGAAGGATACGACATCATCAAATTGAGTTGTGATTTTGGAGTTAATTAATTTATTTAATATCTTTTCTCTTTATTTTTTAAGGAGTGTTTGGCTTAAAAATGAGTGTTTTGTATTTTAGAGTTCAAAATAAATCACAATCTATGTGTTCATATAATCAATCAATCACATGAACTATGTGTACTAGTCGAGTGAGTTATATATAAAACTCACATTCTATATATAGG ATGGCGGAACTCAGCTTCTTCGTCGGCATAATAGGAAACATTATCTCCGTCCTCATGTTCCTTTCTCCGGCGGGAACATTCCGGCGGATTATGAGGAATAAATCGACGGAGGAGTTCGAGAGTTTTCCGTATGTATGCACATGGCTGAACTCCGCTCTCTGGACTTACTACGGAATTATCAAGCCTGGCGCCTACCTCGTCGCCACTATCAATTCCTTTGGCGTGGTTGTACAGTCATTTTTCCTCGGTGTTTTCCTCATCTACGCACCTTCCGCAATGAAGGCGAAGACAGGGATTCTGGTAGGGATTTTGGATATCGGAATGTTGACGGCGGCGATTGCAGTGAGTGAATTGGTATTGGAAGGCGAAAAGCGTATTGGACCTCTAGGGTTTGTTTGTGCCGGACTGAATATCATGATGTACGCCTCGCCGCTGTCTGTCATGAAAACGGTGATAAAGAGTAGGAGTGTGGAGTACATGCCTTTTATGCTATCACTTTTCTTTTCTCTAAATGGAGGAATCTGGACTTTCTATGCTTTTCTCGTGCGTGACTGGTTTCTTGCGGTACCAAATGGAATGGGTTTAGGGTTGGGATTGGCACAACTTTCGCTATATGCAATTTACAGAAATGCCAAAAAGCAATTATTGCCATTAAACACTTCAATAATCACATCACAAAAACAACCCCTTATTTCTTCTTCAGATCCACAACCACAACCCTAA MAELSFFVGIIGNIISVLMFLSPAGTFRRIMRNKSTEEFESFPYVCTWLNSALWTYYGIIKPGAYLVATINSFGVVVQSFFLGVFLIYAPSAMKAKTGILVGILDIGMLTAAIAVSELVLEGEKRIGPLGFVCAGLNIMMYASPLSVMKTVIKSRSVEYMPFMLSLFFSLNGGIWTFYAFLVRDWFLAVPNGMGLGLGLAQLSLYAIYRNAKKQLLPLNTSIITSQKQPLISSSDPQPQP
BLAST of Lsi05G015500 vs. Swiss-Prot
Match: SWT17_ARATH (Bidirectional sugar transporter SWEET17 OS=Arabidopsis thaliana GN=SWEET17 PE=1 SV=2) HSP 1 Score: 233.4 bits (594), Expect = 2.6e-60 Identity = 125/241 (51.87%), Postives = 164/241 (68.05%), Query Frame = 1
BLAST of Lsi05G015500 vs. Swiss-Prot
Match: SWT16_ARATH (Bidirectional sugar transporter SWEET16 OS=Arabidopsis thaliana GN=SWEET16 PE=1 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 3.7e-59 Identity = 113/213 (53.05%), Postives = 155/213 (72.77%), Query Frame = 1
BLAST of Lsi05G015500 vs. Swiss-Prot
Match: SWT16_ORYSJ (Bidirectional sugar transporter SWEET16 OS=Oryza sativa subsp. japonica GN=SWEET16 PE=3 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 2.4e-58 Identity = 109/213 (51.17%), Postives = 155/213 (72.77%), Query Frame = 1
BLAST of Lsi05G015500 vs. Swiss-Prot
Match: SWET9_ARATH (Bidirectional sugar transporter SWEET9 OS=Arabidopsis thaliana GN=SWEET9 PE=1 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.8e-45 Identity = 93/220 (42.27%), Postives = 147/220 (66.82%), Query Frame = 1
BLAST of Lsi05G015500 vs. Swiss-Prot
Match: SWT15_ORYSJ (Bidirectional sugar transporter SWEET15 OS=Oryza sativa subsp. japonica GN=SWEET15 PE=2 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 2.6e-44 Identity = 92/221 (41.63%), Postives = 147/221 (66.52%), Query Frame = 1
BLAST of Lsi05G015500 vs. TrEMBL
Match: A0A0A0L599_CUCSA (Bidirectional sugar transporter SWEET OS=Cucumis sativus GN=Csa_3G159450 PE=3 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 2.5e-115 Identity = 222/244 (90.98%), Postives = 228/244 (93.44%), Query Frame = 1
BLAST of Lsi05G015500 vs. TrEMBL
Match: B9RT75_RICCO (Bidirectional sugar transporter SWEET OS=Ricinus communis GN=RCOM_0681600 PE=3 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 2.1e-77 Identity = 158/245 (64.49%), Postives = 187/245 (76.33%), Query Frame = 1
BLAST of Lsi05G015500 vs. TrEMBL
Match: A0A067G891_CITSI (Bidirectional sugar transporter SWEET OS=Citrus sinensis GN=CISIN_1g026722mg PE=3 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 4.7e-77 Identity = 151/234 (64.53%), Postives = 187/234 (79.91%), Query Frame = 1
BLAST of Lsi05G015500 vs. TrEMBL
Match: V4S7B3_9ROSI (Bidirectional sugar transporter SWEET OS=Citrus clementina GN=CICLE_v10005737mg PE=3 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 1.8e-76 Identity = 150/234 (64.10%), Postives = 187/234 (79.91%), Query Frame = 1
BLAST of Lsi05G015500 vs. TrEMBL
Match: A0A0D2N8F2_GOSRA (Bidirectional sugar transporter SWEET OS=Gossypium raimondii GN=B456_005G061100 PE=3 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 3.0e-76 Identity = 145/231 (62.77%), Postives = 185/231 (80.09%), Query Frame = 1
BLAST of Lsi05G015500 vs. TAIR10
Match: AT4G15920.1 (AT4G15920.1 Nodulin MtN3 family protein) HSP 1 Score: 233.8 bits (595), Expect = 1.1e-61 Identity = 125/241 (51.87%), Postives = 164/241 (68.05%), Query Frame = 1
BLAST of Lsi05G015500 vs. TAIR10
Match: AT3G16690.1 (AT3G16690.1 Nodulin MtN3 family protein) HSP 1 Score: 229.6 bits (584), Expect = 2.1e-60 Identity = 113/213 (53.05%), Postives = 155/213 (72.77%), Query Frame = 1
BLAST of Lsi05G015500 vs. TAIR10
Match: AT2G39060.1 (AT2G39060.1 Nodulin MtN3 family protein) HSP 1 Score: 184.1 bits (466), Expect = 1.0e-46 Identity = 93/220 (42.27%), Postives = 147/220 (66.82%), Query Frame = 1
BLAST of Lsi05G015500 vs. TAIR10
Match: AT5G50800.1 (AT5G50800.1 Nodulin MtN3 family protein) HSP 1 Score: 171.4 bits (433), Expect = 6.8e-43 Identity = 86/209 (41.15%), Postives = 139/209 (66.51%), Query Frame = 1
BLAST of Lsi05G015500 vs. TAIR10
Match: AT4G10850.1 (AT4G10850.1 Nodulin MtN3 family protein) HSP 1 Score: 170.2 bits (430), Expect = 1.5e-42 Identity = 97/213 (45.54%), Postives = 133/213 (62.44%), Query Frame = 1
BLAST of Lsi05G015500 vs. NCBI nr
Match: gi|449432868|ref|XP_004134220.1| (PREDICTED: bidirectional sugar transporter SWEET17 [Cucumis sativus]) HSP 1 Score: 422.9 bits (1086), Expect = 3.6e-115 Identity = 222/244 (90.98%), Postives = 228/244 (93.44%), Query Frame = 1
BLAST of Lsi05G015500 vs. NCBI nr
Match: gi|255551797|ref|XP_002516944.1| (PREDICTED: bidirectional sugar transporter SWEET17 [Ricinus communis]) HSP 1 Score: 297.0 bits (759), Expect = 3.0e-77 Identity = 158/245 (64.49%), Postives = 187/245 (76.33%), Query Frame = 1
BLAST of Lsi05G015500 vs. NCBI nr
Match: gi|641852858|gb|KDO71717.1| (hypothetical protein CISIN_1g026722mg [Citrus sinensis]) HSP 1 Score: 295.8 bits (756), Expect = 6.7e-77 Identity = 151/234 (64.53%), Postives = 187/234 (79.91%), Query Frame = 1
BLAST of Lsi05G015500 vs. NCBI nr
Match: gi|567852745|ref|XP_006419536.1| (hypothetical protein CICLE_v10005737mg [Citrus clementina]) HSP 1 Score: 293.9 bits (751), Expect = 2.6e-76 Identity = 150/234 (64.10%), Postives = 187/234 (79.91%), Query Frame = 1
BLAST of Lsi05G015500 vs. NCBI nr
Match: gi|823164349|ref|XP_012482125.1| (PREDICTED: bidirectional sugar transporter SWEET17-like isoform X1 [Gossypium raimondii]) HSP 1 Score: 293.1 bits (749), Expect = 4.4e-76 Identity = 145/231 (62.77%), Postives = 185/231 (80.09%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |