Lsi05G015230 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G015230
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionMitochondrial transcription termination factor family protein, putative
Locationchr05 : 23030608 .. 23031705 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATCATTTGCTTCGTAGAATCGTTCTAGTTAGACCTCCATCATCAGTCTCTGCTCACGGATTTTCTGAAAGTCCGTTGAAATCTCTCAGATACTTATCGACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATTTTGTTCAGGTTAAGAACAATGAGGAGCCTTTAATTGTGTTCTTTGAGAATCATGGATTCTCTAAATCACAGATCTCCGAGCTCGTCAAGAAGTTCCCTCAGGTTCTTTCAGCGAACCTCGAGAAAACCCTATTGCCCAAATTGTTGTTCTTTCAATCTAAAGGCCTTTCTTCCCCCGAGATTGCCAAATTAATATGTGGTTTTCCTTTCGTTTTAAAACGAAGTTTAAACAGACAAATTATTCCAACCTTTGATTACATTCAAGCCCTGCTTCAAACAGAGGAGAAGACTATCGCAGTGATAAAACGCTTCGTGGGTATTCTCACTTGGGATCTTCGAATTTCAGCTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCTGATTCCAATATTTCAACCATTCTTCGGTACCAGCCTCGAGTGTTCTTGACAAATTCCATCCGATTCAAGGAGATTGTAGAGGAAGTTAAGGAAATGGGATTCAATCCTCAGCGATTGAAGTTTGTTCTTGCTGTTTTTGCTCTGCGAACAATGAGCAAATCTACCTGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATGGTCTGAAGAAGAGATCCGTTTGGCTTTTGGTAGGCATCCATGGTGTATGATGGCTTCTGAGGATAAGATTAATGGTGTAATGGATTATTTTGTCAACAAGATTGGATGTGAATCTTCTTTCATTGCTAGGAGACCTGCTCTAATTTCACATAGCTTAAAGAAGAGGATTTTGCCTAGAGGCTCTGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAACATGGGAATCTTCCTTTGTTGTTTGATTCTACTGAAAATCGCTTCTTAGACAAATTCATCAACCCTTATAAGGAGCGGATTCCTGGATTGTTGAAGTTTTATACAGAGAAATTAAAGGATTCTAAAAGATGA

mRNA sequence

ATGTATCATTTGCTTCGTAGAATCGTTCTAGTTAGACCTCCATCATCAGTCTCTGCTCACGGATTTTCTGAAAGTCCGTTGAAATCTCTCAGATACTTATCGACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATTTTGTTCAGGTTAAGAACAATGAGGAGCCTTTAATTGTGTTCTTTGAGAATCATGGATTCTCTAAATCACAGATCTCCGAGCTCGTCAAGAAGTTCCCTCAGGTTCTTTCAGCGAACCTCGAGAAAACCCTATTGCCCAAATTGTTGTTCTTTCAATCTAAAGGCCTTTCTTCCCCCGAGATTGCCAAATTAATATGTGGTTTTCCTTTCGTTTTAAAACGAAGTTTAAACAGACAAATTATTCCAACCTTTGATTACATTCAAGCCCTGCTTCAAACAGAGGAGAAGACTATCGCAGTGATAAAACGCTTCGTGGGTATTCTCACTTGGGATCTTCGAATTTCAGCTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCTGATTCCAATATTTCAACCATTCTTCGGTACCAGCCTCGAGTGTTCTTGACAAATTCCATCCGATTCAAGGAGATTGTAGAGGAAGTTAAGGAAATGGGATTCAATCCTCAGCGATTGAAGTTTGTTCTTGCTGTTTTTGCTCTGCGAACAATGAGCAAATCTACCTGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATGGTCTGAAGAAGAGATCCGTTTGGCTTTTGGTAGGCATCCATGGTGTATGATGGCTTCTGAGGATAAGATTAATGGTGTAATGGATTATTTTGTCAACAAGATTGGATGTGAATCTTCTTTCATTGCTAGGAGACCTGCTCTAATTTCACATAGCTTAAAGAAGAGGATTTTGCCTAGAGGCTCTGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAACATGGGAATCTTCCTTTGTTGTTTGATTCTACTGAAAATCGCTTCTTAGACAAATTCATCAACCCTTATAAGGAGCGGATTCCTGGATTGTTGAAGTTTTATACAGAGAAATTAAAGGATTCTAAAAGATGA

Coding sequence (CDS)

ATGTATCATTTGCTTCGTAGAATCGTTCTAGTTAGACCTCCATCATCAGTCTCTGCTCACGGATTTTCTGAAAGTCCGTTGAAATCTCTCAGATACTTATCGACCTCTTCTGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCTTCTAATTTTGTTCAGGTTAAGAACAATGAGGAGCCTTTAATTGTGTTCTTTGAGAATCATGGATTCTCTAAATCACAGATCTCCGAGCTCGTCAAGAAGTTCCCTCAGGTTCTTTCAGCGAACCTCGAGAAAACCCTATTGCCCAAATTGTTGTTCTTTCAATCTAAAGGCCTTTCTTCCCCCGAGATTGCCAAATTAATATGTGGTTTTCCTTTCGTTTTAAAACGAAGTTTAAACAGACAAATTATTCCAACCTTTGATTACATTCAAGCCCTGCTTCAAACAGAGGAGAAGACTATCGCAGTGATAAAACGCTTCGTGGGTATTCTCACTTGGGATCTTCGAATTTCAGCTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCTGATTCCAATATTTCAACCATTCTTCGGTACCAGCCTCGAGTGTTCTTGACAAATTCCATCCGATTCAAGGAGATTGTAGAGGAAGTTAAGGAAATGGGATTCAATCCTCAGCGATTGAAGTTTGTTCTTGCTGTTTTTGCTCTGCGAACAATGAGCAAATCTACCTGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATGGTCTGAAGAAGAGATCCGTTTGGCTTTTGGTAGGCATCCATGGTGTATGATGGCTTCTGAGGATAAGATTAATGGTGTAATGGATTATTTTGTCAACAAGATTGGATGTGAATCTTCTTTCATTGCTAGGAGACCTGCTCTAATTTCACATAGCTTAAAGAAGAGGATTTTGCCTAGAGGCTCTGTTTATCAAGTTTTGCTGTCAAAGGGTTTGATTAAGAAACATGGGAATCTTCCTTTGTTGTTTGATTCTACTGAAAATCGCTTCTTAGACAAATTCATCAACCCTTATAAGGAGCGGATTCCTGGATTGTTGAAGTTTTATACAGAGAAATTAAAGGATTCTAAAAGATGA

Protein sequence

MYHLLRRIVLVRPPSSVSAHGFSESPLKSLRYLSTSSEIVSSPKSASLASNFVQVKNNEEPLIVFFENHGFSKSQISELVKKFPQVLSANLEKTLLPKLLFFQSKGLSSPEIAKLICGFPFVLKRSLNRQIIPTFDYIQALLQTEEKTIAVIKRFVGILTWDLRISAGPNIEILKQIGVPDSNISTILRYQPRVFLTNSIRFKEIVEEVKEMGFNPQRLKFVLAVFALRTMSKSTWDKKVEVYRKWGWSEEEIRLAFGRHPWCMMASEDKINGVMDYFVNKIGCESSFIARRPALISHSLKKRILPRGSVYQVLLSKGLIKKHGNLPLLFDSTENRFLDKFINPYKERIPGLLKFYTEKLKDSKR
Homology
[Close]
BLAST of Lsi05G015230 vs. Swiss-Prot
Match: MTEF5_ARATH (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana GN=MTERF5 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.2e-06
Identity = 44/176 (25.00%), Postives = 82/176 (46.59%), Query Frame = 1 

Query: 146 EKTIAVIKRFVGILTWDLRISAGPNIEILKQIGVPDSNISTILRYQPRVF-LTNSIRFKE 205
           E+   + ++F     + L     P +E L  +G+P S+I TIL  +P++  ++ +   K 
Sbjct: 211 EQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKP 270

Query: 206 IVEEVKEMGFNPQRLKFVLAVF-ALRTMSKSTWDKKVEVYRKWGWSEEEIRLAFGRHPWC 265
            +  ++ +G +  +   +++ F A+ T S+      VE   + G +EE+I     R P  
Sbjct: 271 TMAFLETLGIDKNQWAKIISRFPAILTYSRQKLTSTVEFLSQTGLTEEQIGRILTRCPNI 330

Query: 266 MMAS-EDKINGVMDYFVNKIGCESSFIARRPALISHSLKKRILPRGSVYQVLLSKG 319
           M  S EDK+   M+YF +     +  + R P     S++  + P   V +  L KG
Sbjct: 331 MSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSIESNLKP---VTEFFLEKG 383

[Close]
BLAST of Lsi05G015230 vs. Swiss-Prot
Match: MTEF6_ARATH (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.4e-06
Identity = 34/162 (20.99%), Postives = 82/162 (50.62%), Query Frame = 1 

Query: 61  PLIVFFENHGFSKSQISELVKKFPQVLSANLEKTLLPKLLFFQSKGLSSPEIAKLICGFP 120
           P++    + G +  +++  + KFP +LS ++E+ L P L FFQ+ G+   ++ K+I   P
Sbjct: 80  PMVECLSSLGRNPREVASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNP 139

Query: 121 FVLKRSLNRQIIPTFDYIQALLQTEEKTIA-VIKRFVGILTWDLRISAGPNIEILK-QIG 180
            ++  S++ ++     ++ +L   ++  I  V+ +   ++ + +     P  E LK  +G
Sbjct: 140 RLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVG 199

Query: 181 VPDSNISTILRYQPRVFLTNSIR-FKEIVEEVKEMGFNPQRL 220
           + +  I +++   P++   +  +  K   + +KE GF   ++
Sbjct: 200 LSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQI 241

[Close]
BLAST of Lsi05G015230 vs. TrEMBL
Match: A5C3Y0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 7.1e-93
Identity = 170/326 (52.15%), Postives = 236/326 (72.39%), Query Frame = 1 

Query: 42  SPKSASLASNFVQVKNNEEP--LIVFFENHGFSKSQISELVKKFPQVLSANLEKTLLPKL 101
           S K A  AS ++  +  E+P  ++ FF +HGFSK+Q S++VK  PQ+L ++ +KTLLPKL
Sbjct: 64  SHKDALSASKYIHFEAPEKPNSVLAFFNSHGFSKTQTSKIVKTEPQLLLSDPDKTLLPKL 123

Query: 102 LFFQSKGLSSPEIAKLICGFPFVLKRSLNRQIIPTFDYIQALLQTEEKTIAVIKRFVGIL 161
            FF SKG S P++AK++   P +++RSL  Q+IP++++ +  LQ+++  I V+KRF  IL
Sbjct: 124 QFFYSKGTSKPDVAKIVASSPAIMRRSLENQVIPSYNFFKDFLQSDKMAITVVKRFSRIL 183

Query: 162 TWDLRISAGPNIEILKQIGVPDSNISTILRYQPRVFLTNSIRFKEIVEEVKEMGFNPQRL 221
            +D+      N+  L++ GVP SNI+ +LR QP  F+     F+E +EEVK+MGFNP ++
Sbjct: 184 LFDIHTYVASNMNALQEFGVPKSNIAGLLRNQPMAFMVRPNLFRENLEEVKKMGFNPSQM 243

Query: 222 KFVLAVFALRTMSKSTWDKKVEVYRKWGWSEEEIRLAFGRHPWCMMASEDKINGVMDYFV 281
           KFV+AV A+R   KS+W++K+++Y+ WGWSEEEIRLAF + PWCM+ SEDKI   MD+FV
Sbjct: 244 KFVIAVQAIRAGGKSSWERKIDIYKSWGWSEEEIRLAFTKSPWCMIYSEDKIMTTMDFFV 303

Query: 282 NKIGCESSFIARRPALISHSLKKRILPRGSVYQVLLSKGLIKKHGNLPLLFDSTENRFLD 341
           NK+G ESS IARRP LISHSL+KRI+PR SV QVLLSKGLI K  +LP +F STE  FL 
Sbjct: 304 NKMGRESSLIARRPVLISHSLEKRIIPRYSVVQVLLSKGLIDKDFSLPTVFQSTEKMFLH 363

Query: 342 KFINPYKERIPGLLKFYTEKLKDSKR 366
           KF+N YKE  P L+K Y EK+  S++
Sbjct: 364 KFVNVYKEEAPQLMKLYQEKINLSEK 389

[Close]
BLAST of Lsi05G015230 vs. TrEMBL
Match: F6HDG3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 3.5e-92
Identity = 184/355 (51.83%), Postives = 248/355 (69.86%), Query Frame = 1 

Query: 13  PPSSVSAHGFSESPLKSLRYLSTSSEIVSSPKSASLASNFVQVKNNEEP--LIVFFENHG 72
           P SS+S  G S+S   ++ YL  S  +  S K A  AS F   +  ++P  ++ FF +HG
Sbjct: 36  PFSSISPSGKSQS--FTVSYLIDSCGL--SHKDALSASKFFSFETPDKPNSVLAFFNSHG 95

Query: 73  FSKSQISELVKKFPQVLSANLEKTLLPKLLFFQSKGLSSPEIAKLICGFPFVLKRSLNRQ 132
           FSKSQIS++VK  P++L+++ +KTLLPKL FF SKG S P++AK++   P +L RSL  Q
Sbjct: 96  FSKSQISKIVKSLPRLLASDPDKTLLPKLQFFYSKGASRPDVAKIVVSTPGILYRSLENQ 155

Query: 133 IIPTFDYIQALLQTEEKTIAVIKRFVGILTWDLRISAGPNIEILKQIGVPDSNISTILRY 192
           IIP+F++ +  LQ++E  I VIKRF  IL +DL      NI  L++ GVP SNI+ +L  
Sbjct: 156 IIPSFNFFKDFLQSDEMAITVIKRFSRILLFDLHTYVASNINALQEFGVPKSNIAGLLMN 215

Query: 193 QPRVFLTNSIRFKEIVEEVKEMGFNPQRLKFVLAVFALRTMSKSTWDKKVEVYRKWGWSE 252
           +P  F+     F+E +EEVK+MGFNP ++KFV+A+ A+R M KSTW++K++ Y++WGWSE
Sbjct: 216 RPMAFMVRPNLFRENLEEVKKMGFNPSQMKFVIAIHAMRAMGKSTWERKIDAYKRWGWSE 275

Query: 253 EEIRLAFGRHPWCMMASEDKINGVMDYFVNKIGCESSFIARRPALISHSLKKRILPRGSV 312
           EEIRLAF + P CM  SEDKI   MD+FVNK+G ESS IARRP LI  SL+KRI+PR SV
Sbjct: 276 EEIRLAFIKLPRCMTHSEDKIMATMDFFVNKMGRESSLIARRPLLIPLSLEKRIIPRYSV 335

Query: 313 YQVLLSKGLIKKHGNLPLLFDSTENRFLDKFINPYKERIPGLLKFYTEKLKDSKR 366
            QVLLSKGLIK   +L +LF+STE  FL KF+N +KE  P L+K Y EK+  SK+
Sbjct: 336 IQVLLSKGLIKNDTSLVVLFESTEKMFLRKFVNGFKEEAPQLMKLYQEKINLSKK 386

[Close]
BLAST of Lsi05G015230 vs. TrEMBL
Match: F6HDG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.3e-90
Identity = 174/342 (50.88%), Postives = 241/342 (70.47%), Query Frame = 1 

Query: 15  SSVSAHGFSESPLKSLRYLSTSSEIVSSPKSASLASNFVQVKNNEEP--LIVFFENHGFS 74
           SS S      S   ++ YL  S  +  S K A  AS  ++ +  E+P  ++ FF +HGFS
Sbjct: 42  SSTSISTSERSESFTVSYLIDSCGL--SHKDALSASKLLRFETPEKPDSVLAFFNSHGFS 101

Query: 75  KSQISELVKKFPQVLSANLEKTLLPKLLFFQSKGLSSPEIAKLICGFPFVLKRSLNRQII 134
           KSQ S++VK  P++L+++ +KTLLPKL FF SKG S P++AK++   P +LKRSL  QII
Sbjct: 102 KSQTSKIVKSLPRLLASDPDKTLLPKLQFFYSKGASKPDVAKIVVSTPGILKRSLENQII 161

Query: 135 PTFDYIQALLQTEEKTIAVIKRFVGILTWDLRISAGPNIEILKQIGVPDSNISTILRYQP 194
           P+F++++  LQ++E  I V+KRF  IL +DL      N+  L++ GVP SNI+ +L Y+P
Sbjct: 162 PSFNFLKDFLQSDEMAITVVKRFSRILLFDLHTYVASNMNALQEFGVPKSNIAGLLMYRP 221

Query: 195 RVFLTNSIRFKEIVEEVKEMGFNPQRLKFVLAVFALRTMSKSTWDKKVEVYRKWGWSEEE 254
             F+ N   F++ +EEVK+MGFNP ++KFVLA+ A+R   +S W++K+++Y+KWGWSEEE
Sbjct: 222 MAFMVNPNLFRKNLEEVKKMGFNPSQMKFVLAIQAMRAGGESCWERKIDIYKKWGWSEEE 281

Query: 255 IRLAFGRHPWCMMASEDKINGVMDYFVNKIGCESSFIARRPALISHSLKKRILPRGSVYQ 314
           IRLAF + PWCM+ SEDKI   MD+FVNK+G ESS IA RP LI  SL+KRI+PR SV Q
Sbjct: 282 IRLAFTKSPWCMIYSEDKIMAKMDFFVNKMGRESSLIAHRPFLIGLSLEKRIIPRYSVVQ 341

Query: 315 VLLSKGLIKKHGNLPLLFDSTENRFLDKFINPYKERIPGLLK 355
           VLLSKGLI K  +L +LF+STE  FL++F+N YKE  P L+K
Sbjct: 342 VLLSKGLINKDISLVVLFESTEKTFLERFVNAYKEEAPQLIK 381

[Close]
BLAST of Lsi05G015230 vs. TrEMBL
Match: A5C3X9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017396 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.1e-88
Identity = 178/354 (50.28%), Postives = 244/354 (68.93%), Query Frame = 1 

Query: 15  SSVSAHGFSESPLK-SLRYLSTSSEIVSSPKSASLASNFVQVKNNEEP--LIVFFENHGF 74
           SS ++   SE P   ++ YL  S  +  S K A  AS +V  ++ ++P  ++  F +HGF
Sbjct: 41  SSSTSISTSEKPHPFTVSYLINSCGL--SHKDARSASKYVHFESPDKPNSVLALFNSHGF 100

Query: 75  SKSQISELVKKFPQVLSANLEKTLLPKLLFFQSKGLSSPEIAKLICGFPFVLKRSLNRQI 134
           SK+Q S++ KK PQ+L ++ +KTLLPKL FF SKG S P+IAK++   P +LKRSL  QI
Sbjct: 101 SKTQTSKIXKKEPQLLLSDPDKTLLPKLQFFYSKGASWPDIAKIVVCSPSILKRSLENQI 160

Query: 135 IPTFDYIQALLQTEEKTIAVIKRFVGILTWDLRISAGPNIEILKQIGVPDSNISTILRYQ 194
           IP+F++ +  LQ+++  I V+KRF  IL +DL      N+  L++ GVP SNI+ +L  Q
Sbjct: 161 IPSFNFFKDXLQSDKMAITVVKRFSRILLFDLHTYVASNMNALQEFGVPKSNIAGLLMNQ 220

Query: 195 PRVFLTNSIRFKEIVEEVKEMGFNPQRLKFVLAVFALRTMSKSTWDKKVEVYRKWGWSEE 254
           P  F+     F+E +EEVK MGFNP ++KFV+A+ A+R   K +W++K+++Y++WGWSEE
Sbjct: 221 PMAFMVRPNLFRENLEEVKXMGFNPSQMKFVIAIQAIRAGGKXSWERKIDIYKRWGWSEE 280

Query: 255 EIRLAFGRHPWCMMASEDKINGVMDYFVNKIGCESSFIARRPALISHSLKKRILPRGSVY 314
           EIRLAF + PWCM+ SEDKI   MD+FVNK+G ESS IARRP LIS SL+KRI+PR SV 
Sbjct: 281 EIRLAFTKSPWCMIYSEDKIMATMDFFVNKMGRESSSIARRPQLISPSLEKRIIPRYSVV 340

Query: 315 QVLLSKGLIKKHGNLPLLFDSTENRFLDKFINPYKERIPGLLKFYTEKLKDSKR 366
           QVLLSKGLI K  +L  +F STE  FL KF++ YKE  P LL  Y EKL  +K+
Sbjct: 341 QVLLSKGLINKDFSLSAVFQSTEIMFLHKFVDVYKEEAPQLLNLYQEKLNLTKK 392

[Close]
BLAST of Lsi05G015230 vs. TrEMBL
Match: A5B1K5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.6e-87
Identity = 167/321 (52.02%), Postives = 227/321 (70.72%), Query Frame = 1 

Query: 42  SPKSASLASNFVQVKNNEEP--LIVFFENHGFSKSQISELVKKFPQVLSANLEKTLLPKL 101
           S K+A  AS ++  K  E+P  +  FF +HGFS+SQ S++V+  PQ+L ++ +K+LL KL
Sbjct: 60  SHKAALSASKYLHFKTPEKPNSVFAFFNSHGFSESQTSKIVRSQPQLLVSDPDKSLLLKL 119

Query: 102 LFFQSKGLSSPEIAKLICGFPFVLKRSLNRQIIPTFDYIQALLQTEEKTIAVIKRFVGIL 161
            FF SKG S+P++ K+I   P +LKRSL  QIIP+F++ +   Q+EE T+A +KRF  +L
Sbjct: 120 HFFYSKGASNPDVVKIIASCPVILKRSLENQIIPSFNFFKDFFQSEEMTMATVKRFSRVL 179

Query: 162 TWDLRISAGPNIEILKQIGVPDSNISTILRYQPRVFLTNSIRFKEIVEEVKEMGFNPQRL 221
             +  I    NI  L++ GVP SNI+ +L  QPR F+     F+EI+EEVK+MGF+P + 
Sbjct: 180 IVNPHICVESNINALQESGVPKSNIAALLSLQPRAFMVRPNHFREILEEVKKMGFDPSKT 239

Query: 222 KFVLAVFALRTMSKSTWDKKVEVYRKWGWSEEEIRLAFGRHPWCMMASEDKINGVMDYFV 281
           +F  AV A+  MSKSTW++K++ Y++WGWSEE+I LAF + PWCM+ SEDKI   MD+FV
Sbjct: 240 RFPTAVQAMTGMSKSTWERKIDAYKRWGWSEEDIWLAFTKSPWCMIYSEDKIMATMDFFV 299

Query: 282 NKIGCESSFIARRPALISHSLKKRILPRGSVYQVLLSKGLIKKHGNLPLLFDSTENRFLD 341
           NK+G ESS IA RP LI  SL+KRI+PR SV QVLLSKGLI K  +L +LF+STE  FL+
Sbjct: 300 NKMGRESSLIANRPFLIGLSLEKRIIPRYSVVQVLLSKGLIDKDISLVVLFESTEKMFLE 359

Query: 342 KFINPYKERIPGLLKFYTEKL 361
           KF+N YKE  P LL  Y EK+
Sbjct: 360 KFVNGYKEEAPQLLNLYQEKV 380

[Close]
BLAST of Lsi05G015230 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 251.9 bits (642), Expect = 6.0e-67
Identity = 137/331 (41.39%), Postives = 206/331 (62.24%), Query Frame = 1 

Query: 29  SLRYLSTSSEIVSSPKSASLASNFVQVKNNEEPLIVF--FENHGFSKSQISELVKKFPQV 88
           +L YL  S  +  SP SA++AS  + + + E P  V     +HGF+ +QIS LVKK P +
Sbjct: 71  TLNYLIDSCGL--SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 89  LSANLEKTLLPKLLFFQSKGLSSPEIAKLICGFPFVLKRSLNRQIIPTFDYIQALLQTEE 148
           L AN E  LLPKL FF S G+S   +A+ +   P +L RSL  Q+IP++++++++L ++E
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 149 KTIAVIKRFVGILTWDLRISAGPNIEILKQIGVPDSNISTILRYQPRVFLTNSIRFKEIV 208
           K +A ++R   +   D   +  PNI  + + GVP+  I  +L + P   +  +  F+ I 
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 209 EEVKEMGFNPQRLKFVLAVFALRTM-SKSTWDKKVEVYRKWGWSEEEIRLAFGRHPWCMM 268
           ++ +EMGFNPQ+  FVLA+ AL    +KS WDK  EVY++WGWSE++I  AF +HP CMM
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 269 ASEDKINGVMDYFVNKIGCESSFIARRPALISHSLKKRILPRGSVYQVLLSKGLIKKHGN 328
            SE KIN  M+YFVN++      IA+ P ++  SL+KRI+PR SV +VL+S GL+K+  +
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 329 LPLLFDSTENRFLDKFINPYKERIPGLLKFY 357
           L  L    E  FL+K +  Y+E +P L+  Y
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]
BLAST of Lsi05G015230 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 214.5 bits (545), Expect = 1.1e-55
Identity = 113/321 (35.20%), Postives = 198/321 (61.68%), Query Frame = 1 

Query: 42  SPKSASLASNFVQVKNNEEP--LIVFFENHGFSKSQISELVKKFPQVLSANLEKTLLPKL 101
           S +SA   S FV++ ++++P  ++  F++HGF+  QI+ ++K FP+VLS + E  + PKL
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKL 128

Query: 102 LFFQSKGLSSPEIAKLICGFPFVLKRSLNRQIIPTFDYIQALLQTEEKTIAVIKRFVGIL 161
           +FF S G S+ + AK+I   P +L  SL++++IP +D ++++L  EE  +  +KR  GI 
Sbjct: 129 MFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKR--GIR 188

Query: 162 TWDLRIS--AGPNIEILKQIGVPDSNISTILRYQPRVFLTNSIRFKEIVEEVKEMGFNPQ 221
            + L+I+      + I +++GVPD +I  +++  P  F +   RF E++  V   GF+P+
Sbjct: 189 CFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPK 248

Query: 222 RLKFVLAVFALRTMSKSTWDKKVEVYRKWGWSEEEIRLAFGRHPWCMMASEDKINGVMDY 281
           +  FV A+ A    S+S  ++K ++++ +GWS+E+   A  R P C+  S++KI   ++Y
Sbjct: 249 KAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEY 308

Query: 282 FVNKIGCESSFIARRPALISHSLKKRILPRGSVYQVLLSKGLIKKHG-NLPLLFDSTENR 341
            VN IG ++  I  RP ++S S++KRI PR  V  +LLSKGL+KK   N   +     + 
Sbjct: 309 LVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSE 368

Query: 342 FLDKFINPYKERIPGLLKFYT 358
           F+DKF+  Y++ +P L++ +T
Sbjct: 369 FMDKFVLKYQDEMPQLVQPFT 387

[Close]
BLAST of Lsi05G015230 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 168.7 bits (426), Expect = 6.7e-42
Identity = 94/315 (29.84%), Postives = 183/315 (58.10%), Query Frame = 1 

Query: 43  PKSASLASNFVQVKNNEEP--LIVFFENHGFSKSQISELVKKFPQVLSANLEKTLLPKLL 102
           P + ++A  +  +K+ E+P  +I   +++ FS +QI + ++  P+++  N+EK L PKL 
Sbjct: 53  PLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLR 112

Query: 103 FFQSKGLSSPEIAKLICGFPFVLKRSLNRQIIPTFDYIQALLQTEEKTIAVIKRFVG--I 162
           FF+  G +   + K +     V+  SL +++IPT + +++++  + + + VI    G  +
Sbjct: 113 FFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLL 172

Query: 163 LTWDLRISAGPNIEILKQIGVPDSNISTILRYQPRVFLTNSIRFKEIVEEVKEMGFNPQR 222
           L+ D  +   PNI  L+  G+  S ++++LR QPR+F  +  + +  V    ++GF    
Sbjct: 173 LSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNS 232

Query: 223 LKFVLAVFALRTMSKSTWDKKVEVYRKWGWSEEEIRLAFGRHPWCMMASEDKINGVMDYF 282
              V AV +L ++S+ T+D+KV+++   G+SE+EI     R P  +  SEDK+    +++
Sbjct: 233 RMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFY 292

Query: 283 VNKIGCESSFIARRPALISHSLKKRILPRGSVYQVLLSKGLI----KKHGNLPLLFDSTE 342
           + ++G E   +A+RP ++S++L+KR++PR  V Q+L  KGL+    KK  N+  + + TE
Sbjct: 293 LKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTE 352

Query: 343 NRFLDKFINPYKERI 350
             FL+K++  + + I
Sbjct: 353 EAFLEKYVVRFGDEI 367

[Close]
BLAST of Lsi05G015230 vs. TAIR10
Match: AT1G61990.1 (AT1G61990.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 125.9 bits (315), Expect = 4.9e-29
Identity = 89/343 (25.95%), Postives = 172/343 (50.15%), Query Frame = 1 

Query: 56  KNNEEPLIVFFENHGFSKSQISELVKKFPQVLSANLEKTLLPKLLFFQSKGLSSPEIAKL 115
           K N + ++  F ++GF+ SQIS ++  +P +L A+ +K L  KL   QS+G SS EI ++
Sbjct: 81  KVNPDSVLSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQSRGASSSEITEI 140

Query: 116 ICGFPFVLKRSLNRQIIPTFDYIQALLQTEEKTIAVIKRFVGILTWDLRISAGPNIEILK 175
           +   P +L +   + I   +D ++ ++  +  +   + +  G     +R     N+  L+
Sbjct: 141 VSTVPRILGK---KSITVYYDAVKDIIVADTSSSYELPQ--GSQGNKIR-----NVSALR 200

Query: 176 QIGVPDSNISTIL--RYQPRVFLTNSIRFKEIVEEVKEMGFNPQRLKFVLAVFALRTMSK 235
           ++G+P   +  +L  + QP   +     F   +++V EMGF+P   KFVLA+  L  MS+
Sbjct: 201 ELGMPSRLLLPLLVSKSQP---VCGKENFDASLKKVVEMGFDPTTTKFVLALRMLYQMSE 260

Query: 236 STWDKKVEVYRKWGWSEEEIRLAFGRHPWCMMASEDKI---------------------- 295
            T ++KV V+R  G++ +++   F + P  +  S+ KI                      
Sbjct: 261 KTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVK 320

Query: 296 --NGVMDYFVNKIGCESSFIARR-----------PALISHSLKKRILPRGSVYQVLLSKG 355
                ++Y V  +  ++ F+ ++           P +  +S++KRI+PR ++ + LLSKG
Sbjct: 321 RYPPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKG 380

Query: 356 LIKKHGNLPL---LFDSTENRFLDKFINPYKERIPGLLKFYTE 359
           L++K   LP    +   T+  FLD+++  + E +P L+  +T+
Sbjct: 381 LLRKGSELPAVSSVLSCTDEGFLDRYVMKHNELVPTLMAIFTK 410

[Close]
BLAST of Lsi05G015230 vs. TAIR10
Match: AT3G46950.1 (AT3G46950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 117.1 bits (292), Expect = 2.3e-26
Identity = 67/218 (30.73%), Postives = 128/218 (58.72%), Query Frame = 1 

Query: 56  KNNEEPLIVFFENHGFSKSQISELVKKFPQVLSANLEKTLLPKLLFFQSKGLSSPEIAKL 115
           K N + ++    ++GF  SQIS +++ +P++L  + EK+L PKL F +S+G SS E+ ++
Sbjct: 81  KVNPDSVLNLLRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEI 140

Query: 116 ICGFPFVLKRSLNRQIIPTFDYIQALLQTEEKTIAVIKRFVGILTWDLRISAGPNIEILK 175
           +   P +L +     +   +D+++ ++Q + K++ +            + +   NI +L+
Sbjct: 141 VSNVPTILDKKGEESVSLYYDFVKDIMQ-DGKSLCI------SCPEGKKGNRIRNISVLR 200

Query: 176 QIGVPDSNISTIL--RYQPRVFLTNSIRFKEIVEEVKEMGFNPQRLKFVLAVFALRTMSK 235
           ++GVP   + ++L  RYQP   +    +F+E +++V +MGF+P + KFV A+  +  MS+
Sbjct: 201 ELGVPQKLLFSLLISRYQP---VCGKEKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSE 260

Query: 236 STWDKKVEVYRKWGWSEEEIRLAFGRHPWCMMASEDKI 272
            T ++KV VY++ G+SE EI   F + P+ +  SE KI
Sbjct: 261 KTIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKI 288

[Close]
BLAST of Lsi05G015230 vs. NCBI nr
Match: gi|659076738|ref|XP_008438842.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X5 [Cucumis melo])

HSP 1 Score: 545.4 bits (1404), Expect = 7.4e-152
Identity = 277/365 (75.89%), Postives = 310/365 (84.93%), Query Frame = 1 

Query: 1   MYHLLRRIVLVRPPSSVSAHGFSESPLKSLRYLSTSSEIVSSPKSASLASNFVQVKNNEE 60
           M +L RRI+L+R PSSV +HGFSE PLKSLR+LSTSSEIVSSPKSASLASN VQ+KNN +
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  PLIVFFENHGFSKSQISELVKKFPQVLSANLEKTLLPKLLFFQSKGLSSPEIAKLICGFP 120
               FFENHGFS+SQIS++ KKFPQ+LSAN EK LLPKLLFFQSKGLSSPEI KL+C FP
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSFP 120

Query: 121 FVLKRSLNRQIIPTFDYIQALLQTEEKTIAVIKRFVGILTWDLRISAGPNIEILKQIGVP 180
            VL  SL+ +IIP FDYIQA+L +EEKT+A IK F  ILT DLRIS GPNIEILKQIGVP
Sbjct: 121 RVLAGSLDNRIIPAFDYIQAVLGSEEKTLAFIKYFGSILTHDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISTILRYQPRVFLTNSIRFKEIVEEVKEMGFNPQRLKFVLAVFALRTMSKSTWDKKV 240
           DSNI    +YQPRVF  NSIRFKE VE V EMGFNPQRL+F++AVFALR M+KSTWDKKV
Sbjct: 181 DSNILKYFQYQPRVFSRNSIRFKETVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGWSEEEIRLAFGRHPWCMMASEDKINGVMDYFVNKIGCESSFIARRPALISHSL 300
           EVYRKWG SEEEI LAF RHPWCMM SEDKING MD+FVNKIGCESSF+ARRPALIS SL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGSVYQVLLSKGLIKKHGNLPLLFDSTENRFLDKFINPYKERIPGLLKFYTEKL 360
           KKR+ PRG VYQVLL KGLIKK  N+PL   S+ENRF+DKFINP+KE+IPGLL+ Y +KL
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKL 360

Query: 361 KDSKR 366
            DS+R
Sbjct: 361 MDSRR 365

[Close]
BLAST of Lsi05G015230 vs. NCBI nr
Match: gi|659076748|ref|XP_008438847.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X10 [Cucumis melo])

HSP 1 Score: 543.5 bits (1399), Expect = 2.8e-151
Identity = 269/365 (73.70%), Postives = 314/365 (86.03%), Query Frame = 1 

Query: 1   MYHLLRRIVLVRPPSSVSAHGFSESPLKSLRYLSTSSEIVSSPKSASLASNFVQVKNNEE 60
           M +L RRI+L+R PSSV +HGFSE PLKSLR+LSTSSEIVSSPKSASLASN VQ+KNN +
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  PLIVFFENHGFSKSQISELVKKFPQVLSANLEKTLLPKLLFFQSKGLSSPEIAKLICGFP 120
               FFENHGFS+SQIS++ KKFPQ+LSAN EK LLPKLLFFQSKGLSSPEI KL+C +P
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCLYP 120

Query: 121 FVLKRSLNRQIIPTFDYIQALLQTEEKTIAVIKRFVGILTWDLRISAGPNIEILKQIGVP 180
           + L+ SLN+++IP FDYIQA+  ++EK +A IK+F GIL +DL+I  GPNIEILKQIGVP
Sbjct: 121 WALRASLNKRMIPAFDYIQAVFGSKEKALAAIKQFAGILCFDLKILVGPNIEILKQIGVP 180

Query: 181 DSNISTILRYQPRVFLTNSIRFKEIVEEVKEMGFNPQRLKFVLAVFALRTMSKSTWDKKV 240
           DSNI   L+Y+PRVFLTN IRFKEIVE   EMGFNPQ+L+F++AVF LR+M+KSTWDKKV
Sbjct: 181 DSNIFKYLQYEPRVFLTNPIRFKEIVERAMEMGFNPQQLQFLVAVFILRSMAKSTWDKKV 240

Query: 241 EVYRKWGWSEEEIRLAFGRHPWCMMASEDKINGVMDYFVNKIGCESSFIARRPALISHSL 300
           EVYRKWG SEEEIRLAF +HPWCMM SEDKING MD+FVNKIGCESSF+ARRPALIS SL
Sbjct: 241 EVYRKWGLSEEEIRLAFRKHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGSVYQVLLSKGLIKKHGNLPLLFDSTENRFLDKFINPYKERIPGLLKFYTEKL 360
           KKR+ PRG VYQVLL KGLIKK  N+PL   S+ENRF+DKFINP+KE+IPGLL+ Y +KL
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQTNIPLFVSSSENRFIDKFINPHKEKIPGLLESYEQKL 360

Query: 361 KDSKR 366
            DS+R
Sbjct: 361 MDSRR 365

[Close]
BLAST of Lsi05G015230 vs. NCBI nr
Match: gi|659077781|ref|XP_008439382.1| (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo])

HSP 1 Score: 532.3 bits (1370), Expect = 6.5e-148
Identity = 270/366 (73.77%), Postives = 314/366 (85.79%), Query Frame = 1 

Query: 1   MYHLLRRIVLVRPPSSVSAHGFSESPLKSLRYLSTSSEIVSSPKSASLASNFVQVKNNEE 60
           M +L RRI+L+R PSSV +HGFSESPLKSLR+LSTSSEIVSSPKSASLASN VQ++NN +
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  PLIVFFENHGFSKSQISELVKKFPQVLSANLEKTLLPKLLFFQSKGLSSPEIAKLICGFP 120
            +I    NHGFS+SQIS++ ++ PQ+L+AN EK LLPKLLFFQSKGLSSPEIAKL+C FP
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 FVLKRSLNRQIIPTFDYIQALLQTEEKTIAVIKRFVGILTWDLRISAGPNIEILKQIGVP 180
           +VL  SLN++II  FDYIQA+L +EEKT+A IK+F GIL  DL+IS GPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNISTILRYQPRVFLTNSIRFKEIVEEVKEMGFNPQRLKFVLAVFALRTMSKSTWDKKV 240
           DSNI   L+YQPRVF+ +SIRFKEIVE V EMGFNPQRL+F++AVFALR M+KSTWDKKV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EVYRKWGWSEEEIRLAFGRHPWCMMASEDKINGVMDYFVNKIGCESSFIARRPALISHSL 300
           EVYRKWG SEEEI LAF RHPWCMM SEDKING MD+FVNKIGCESSF+ARRPALIS SL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGSVYQVLLSKGLIKKHGNLPLLFDSTENRFLDKFINPYK-ERIPGLLKFYTEK 360
           KKR+ PRG VYQVLL KGLIKK  N+PL   S+E RF++KFINP+K E+IPGLL+ Y +K
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 LKDSKR 366
           L DS+R
Sbjct: 361 LMDSRR 366

[Close]
BLAST of Lsi05G015230 vs. NCBI nr
Match: gi|659076720|ref|XP_008438832.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X1 [Cucumis melo])

HSP 1 Score: 531.9 bits (1369), Expect = 8.5e-148
Identity = 266/365 (72.88%), Postives = 311/365 (85.21%), Query Frame = 1 

Query: 1   MYHLLRRIVLVRPPSSVSAHGFSESPLKSLRYLSTSSEIVSSPKSASLASNFVQVKNNEE 60
           MY+L RRI+L+R PSSV +HGFSE+PLKSLRYLSTSSEIVSSPKSASLASN VQ+KNN +
Sbjct: 1   MYNLFRRILLLRSPSSVFSHGFSETPLKSLRYLSTSSEIVSSPKSASLASNDVQLKNNGK 60

Query: 61  PLIVFFENHGFSKSQISELVKKFPQVLSANLEKTLLPKLLFFQSKGLSSPEIAKLICGFP 120
            +I    NHGFS+SQIS+L K+FPQ+LSAN EK LLPKLLFF+SKGLSSPEIAK++  FP
Sbjct: 61  AVIALLANHGFSQSQISDLAKRFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYSFP 120

Query: 121 FVLKRSLNRQIIPTFDYIQALLQTEEKTIAVIKRFVGILTWDLRISAGPNIEILKQIGVP 180
           +VL  SLN +IIP FDYIQA+L +EEKT+ +IK F GILT DLRIS GPNIEILKQIGVP
Sbjct: 121 YVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISTILRYQPRVFLTNSIRFKEIVEEVKEMGFNPQRLKFVLAVFALRTMSKSTWDKKV 240
           DSNI   L+Y+PRVFLTN IRFKE V+ V EMGFNPQ+L+FV+AVF LR+++KSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGWSEEEIRLAFGRHPWCMMASEDKINGVMDYFVNKIGCESSFIARRPALISHSL 300
           EVYRKWG SEEEI LAF RHPWCMM SEDKINGVMD+FVNKIGCESSF+A RP LIS SL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRILPRGSVYQVLLSKGLIKKHGNLPLLFDSTENRFLDKFINPYKERIPGLLKFYTEKL 360
           KKRI PRG VYQVLL+KGLIKKH ++ +    +E  F++K I+P+KE+IPGLL+ Y +KL
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKL 360

Query: 361 KDSKR 366
            DS+R
Sbjct: 361 MDSRR 365

[Close]
BLAST of Lsi05G015230 vs. NCBI nr
Match: gi|659076736|ref|XP_008438841.1| (PREDICTED: uncharacterized protein LOC103483819 isoform X4 [Cucumis melo])

HSP 1 Score: 531.6 bits (1368), Expect = 1.1e-147
Identity = 266/365 (72.88%), Postives = 310/365 (84.93%), Query Frame = 1 

Query: 1   MYHLLRRIVLVRPPSSVSAHGFSESPLKSLRYLSTSSEIVSSPKSASLASNFVQVKNNEE 60
           M +L RRI+L+R PSSV +HGFSE PLKSLR+LSTSSEIVSSPKSASLASN VQ+KNN +
Sbjct: 1   MSNLFRRILLLRSPSSVFSHGFSECPLKSLRFLSTSSEIVSSPKSASLASNVVQIKNNRK 60

Query: 61  PLIVFFENHGFSKSQISELVKKFPQVLSANLEKTLLPKLLFFQSKGLSSPEIAKLICGFP 120
               FFENHGFS+SQIS++ KKFPQ+LSAN EK LLPKLLFF+SKGLSSPEIAK++  FP
Sbjct: 61  AAFSFFENHGFSESQISDIDKKFPQILSANPEKILLPKLLFFRSKGLSSPEIAKIVYSFP 120

Query: 121 FVLKRSLNRQIIPTFDYIQALLQTEEKTIAVIKRFVGILTWDLRISAGPNIEILKQIGVP 180
           +VL  SLN +IIP FDYIQA+L +EEKT+ +IK F GILT DLRIS GPNIEILKQIGVP
Sbjct: 121 YVLSGSLNNRIIPAFDYIQAVLGSEEKTLTLIKYFAGILTQDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISTILRYQPRVFLTNSIRFKEIVEEVKEMGFNPQRLKFVLAVFALRTMSKSTWDKKV 240
           DSNI   L+Y+PRVFLTN IRFKE V+ V EMGFNPQ+L+FV+AVF LR+++KSTWDKKV
Sbjct: 181 DSNIFKYLQYRPRVFLTNPIRFKETVDRVTEMGFNPQQLQFVVAVFILRSLTKSTWDKKV 240

Query: 241 EVYRKWGWSEEEIRLAFGRHPWCMMASEDKINGVMDYFVNKIGCESSFIARRPALISHSL 300
           EVYRKWG SEEEI LAF RHPWCMM SEDKINGVMD+FVNKIGCESSF+A RP LIS SL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGVMDFFVNKIGCESSFVASRPVLISLSL 300

Query: 301 KKRILPRGSVYQVLLSKGLIKKHGNLPLLFDSTENRFLDKFINPYKERIPGLLKFYTEKL 360
           KKRI PRG VYQVLL+KGLIKKH ++ +    +E  F++K I+P+KE+IPGLL+ Y +KL
Sbjct: 301 KKRIFPRGYVYQVLLAKGLIKKHADITMFVKCSEKHFIEKIIDPHKEQIPGLLESYEQKL 360

Query: 361 KDSKR 366
            DS+R
Sbjct: 361 MDSRR 365

The following BLAST results are available for this feature:
BLAST of Lsi05G015230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MTEF5_ARATH7.2e-0625.00Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana G... [more]
MTEF6_ARATH9.4e-0620.99Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... [more]
BLAST of Lsi05G015230 vs. TrEMBL
Match NameE-valueIdentityDescription
A5C3Y0_VITVI7.1e-9352.15Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017397 PE=4 SV=1[more]
F6HDG3_VITVI3.5e-9251.83Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01640 PE=4 SV=... [more]
F6HDG2_VITVI3.3e-9050.88Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01630 PE=4 SV=... [more]
A5C3X9_VITVI1.1e-8850.28Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017396 PE=4 SV=1[more]
A5B1K5_VITVI2.6e-8752.02Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003242 PE=4 SV=1[more]
BLAST of Lsi05G015230 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07900.16.0e-6741.39 Mitochondrial transcription termination factor family protein[more]
AT1G21150.11.1e-5535.20 Mitochondrial transcription termination factor family protein[more]
AT5G64950.16.7e-4229.84 Mitochondrial transcription termination factor family protein[more]
AT1G61990.14.9e-2925.95 Mitochondrial transcription termination factor family protein[more]
AT3G46950.12.3e-2630.73 Mitochondrial transcription termination factor family protein[more]
BLAST of Lsi05G015230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076738|ref|XP_008438842.1|7.4e-15275.89PREDICTED: uncharacterized protein LOC103483819 isoform X5 [Cucumis melo][more]
gi|659076748|ref|XP_008438847.1|2.8e-15173.70PREDICTED: uncharacterized protein LOC103483819 isoform X10 [Cucumis melo][more]
gi|659077781|ref|XP_008439382.1|6.5e-14873.77PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo][more]
gi|659076720|ref|XP_008438832.1|8.5e-14872.88PREDICTED: uncharacterized protein LOC103483819 isoform X1 [Cucumis melo][more]
gi|659076736|ref|XP_008438841.1|1.1e-14772.88PREDICTED: uncharacterized protein LOC103483819 isoform X4 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G015230.1Lsi05G015230.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 64..223
score: 1.5E-21coord: 231..337
score: 3.8
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 185..215
score: 61.0coord: 286..320
score: 1.4coord: 113..144
score: 67.0coord: 254..285
score: 1.3coord: 77..108
score: 2.5E-6coord: 149..180
score: 13
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 42..361
score: 1.4E
NoneNo IPR availablePANTHERPTHR13068:SF28MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN-RELATEDcoord: 42..361
score: 1.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi05G015230CsaV3_3G014380Cucumber (Chinese Long) v3cuclsiB218
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G015230Bottle gourd (USVL1VR-Ls)lsilsiB006
Lsi05G015230Cucumber (Gy14) v1cgylsiB287
Lsi05G015230Cucumber (Gy14) v1cgylsiB420
Lsi05G015230Cucurbita maxima (Rimu)cmalsiB250
Lsi05G015230Cucurbita maxima (Rimu)cmalsiB353
Lsi05G015230Cucurbita maxima (Rimu)cmalsiB757
Lsi05G015230Cucurbita maxima (Rimu)cmalsiB834
Lsi05G015230Cucurbita moschata (Rifu)cmolsiB238
Lsi05G015230Cucurbita moschata (Rifu)cmolsiB342
Lsi05G015230Cucurbita moschata (Rifu)cmolsiB752
Lsi05G015230Cucurbita moschata (Rifu)cmolsiB819
Lsi05G015230Cucurbita pepo (Zucchini)cpelsiB118
Lsi05G015230Cucurbita pepo (Zucchini)cpelsiB268
Lsi05G015230Cucurbita pepo (Zucchini)cpelsiB512
Lsi05G015230Cucurbita pepo (Zucchini)cpelsiB718
Lsi05G015230Wild cucumber (PI 183967)cpilsiB198
Lsi05G015230Wild cucumber (PI 183967)cpilsiB474
Lsi05G015230Cucumber (Chinese Long) v2culsiB199
Lsi05G015230Cucumber (Chinese Long) v2culsiB466
Lsi05G015230Melon (DHL92) v3.5.1lsimeB342
Lsi05G015230Melon (DHL92) v3.5.1lsimeB369
Lsi05G015230Watermelon (Charleston Gray)lsiwcgB333
Lsi05G015230Watermelon (Charleston Gray)lsiwcgB345
Lsi05G015230Watermelon (97103) v1lsiwmB362
Lsi05G015230Watermelon (97103) v1lsiwmB384
Lsi05G015230Cucumber (Gy14) v2cgyblsiB184
Lsi05G015230Cucumber (Gy14) v2cgyblsiB433
Lsi05G015230Melon (DHL92) v3.6.1lsimedB359
Lsi05G015230Melon (DHL92) v3.6.1lsimedB385
Lsi05G015230Silver-seed gourdcarlsiB065
Lsi05G015230Silver-seed gourdcarlsiB552
Lsi05G015230Silver-seed gourdcarlsiB761
Lsi05G015230Cucumber (Chinese Long) v3cuclsiB494
Lsi05G015230Watermelon (97103) v2lsiwmbB330
Lsi05G015230Watermelon (97103) v2lsiwmbB344
Lsi05G015230Wax gourdlsiwgoB423
Lsi05G015230Wax gourdlsiwgoB432