Lsi05G014750 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G014750
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPeptide methionine sulfoxide reductase msrB
Locationchr05 : 22574860 .. 22576492 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTGTTATTTGTCGTTTTTGTCTCAGTGGTTGTTGGCATGTTGGGCTTGTTTTGAACATGCTTCACTTATGATTCCGTGTGCTAAATGGGATTTTCTTGTCTGTTTGTCTTATTTTTACTGGAAAATTGGTAAATTGTTTCGTAATGTCACTGCAAAATGCCATTATTCAGTAATAGCTTAATCAATAGGTATTCTGTAGTTTTGACATTTGTTGCAGAAGCAGAACTTACTTGGCTGCGCTGAATGACAACCTCCTATGTCACTACAATTTTAAAAGAGTCATCTTTGTTCAATGCATCTTTTTAGAAATTTTAGAAATTCAATGCATCTGAGATTTGTATCCAATTTGACACACCTTTGTATTGGAATGCTTTCAATCCATTATATGGCACTTTGAATGACCAAGCAGGGGCGACGTACTTGAATGGGGTTCAGCTCTATTCGTATTTATGTTATTTATGATTTTGGCTCTAGGGTTTAGAAGAGTTTGCTATATATAAAGTCTCTAACCCTAAAGACGCCTTTGTAATTTGTATTATGACATTTCTCTCTAACAATAAAATTGCTCTCTCTCTCTGTTCGTAGATGTAGCCGACACACTATTAGTAAATCACGAAAATCTCTTTTTCAATTTTTCTACTAGTTTACATTTTTTGTTTCTTTGATTGTCGATTTCTTAATACTTTGCTTGCTTGAGGTTGGAATGTTATGGGTGCGAAATATCACAAGGTTATTTTGTTCTTACAAATGACCACAACCTGACGTTCACCAATTTAATTTAGATATGCATTCAAAATGATTTACCATATGTAGGGTAGGGCCTGATCTTATCTTGTTAATATGATTATCCAAGCCACGTATGAAATATAACAATTTGTCCGTTGTTAAGATGCATACAAGGAGGTATTGCATATTAATTTTGTGGTCTAATGCAATTTTGACCCTAGCCAATTGATTATTTTGAATTCCAAGTAGCTTTGCCTGTAAGACTTGAGCTTTGTTCATCGAGATTTTTGTTACGGAGTTCGATTGGCTTTCGTGTCTTGTATAACCCACTCTTGAAGCCCGCCCGTGAAGAGCTTATTTAGCTGTGTTGTGCACTTGTGGTTGATTCTTTTGAATTTTATGTAGTTTTTGTGGTCTGTTTAATTATCAATCACCATAGCTAGAAGTTGATGATATGCAGGCCTCGTGGCACTGGGAAATATGACAAGTTTTATGAAGAAGGAATATACAACTGTGCAGGCTGTGGAACCCCACTCTATAAGTCAAGCACCAAATTCAATTCTGGCTGTGGCTGGCCTGCTTTCTTTGAGGGTTTTCCTGGAGCAATTAATCGCTTTGTGAGTTAGTTTAAGTGCATAGGCCAATTTCCTTTATTCTTGCATTATCGCTATTTGATTGATTGTAAACAATTGACTGATAACATGGGAAAATATTTTCAGCCGGACCCTGATGGAAGGAGAACTGAGATAACATGTGCTGCATGTGGTGGGCATTTGGGTCATGTTTTTAAAGGCGAGGGATTCGGGACACCTACAGATGAACGCCATTGTGTCAACAGCATTTCGGTCAAGTTTGCTCCTGCTAATGCTTCACAGTGAAGCCTTTCAGAGGCAGTCATAACCTCAG

mRNA sequence

ACTGTTATTTGTCGTTTTTGTCTCAGTGGTTGTTGGCATGTTGGGCTTGTTTTGAACATGCTTCACTTATGATTCCGTGTGCTAAATGGGATTTTCTTGTCTGTTTGTCTTATTTTTACTGGAAAATTGGTAAATTGTTTCGTAATGTCACTGCAAAATGCCATTATTCAGTAATAGCTTAATCAATAGGTATTCTGTAGTTTTGACATTTGTTGCAGAAGCAGAACTTACTTGGCTGCGCTGAATGACAACCTCCTATGTCACTACAATTTTAAAAGAGTCATCTTTGTTCAATGCATCTTTTTAGAAATTTTAGAAATTCAATGCATCTGAGATTTGTATCCAATTTGACACACCTTTGTATTGGAATGCTTTCAATCCATTATATGGCACTTTGAATGACCAAGCAGGGGCGACGTACTTGAATGGGGTTCAGCTCTATTCGTATTTATGTTATTTATGATTTTGGCTCTAGGGTTTAGAAGAGTTTGCTATATATAAAGTCTCTAACCCTAAAGACGCCTTTGTAATTTGTATTATGACATTTCTCTCTAACAATAAAATTGCTCTCTCTCTCTGTTCGTAGATGTAGCCGACACACTATTAGTAAATCACGAAAATCTCTTTTTCAATTTTTCTACTAGTTTACATTTTTTGTTTCTTTGATTGTCGATTTCTTAATACTTTGCTTGCTTGAGGTTGGAATGTTATGGGTGCGAAATATCACAAGGTTATTTTGTTCTTACAAATGACCACAACCTGACGTTCACCAATTTAATTTAGATATGCATTCAAAATGATTTACCATATGTAGGGTAGGGCCTGATCTTATCTTGTTAATATGATTATCCAAGCCACGTATGAAATATAACAATTTGTCCGTTGTTAAGATGCATACAAGGAGGTATTGCATATTAATTTTGTGGTCTAATGCAATTTTGACCCTAGCCAATTGATTATTTTGAATTCCAAGTAGCTTTGCCTGTAAGACTTGAGCTTTGTTCATCGAGATTTTTGTTACGGAGTTCGATTGGCTTTCGTGTCTTGTATAACCCACTCTTGAAGCCCGCCCGTGAAGAGCTTATTTAGCTGTGTTGTGCACTTGTGGTTGATTCTTTTGAATTTTATGTAGTTTTTGTGGTCTGTTTAATTATCAATCACCATAGCTAGAAGTTGATGATATGCAGGCCTCGTGGCACTGGGAAATATGACAAGTTTTATGAAGAAGGAATATACAACTGTGCAGGCTGTGGAACCCCACTCTATAAGTCAAGCACCAAATTCAATTCTGGCTGTGGCTGGCCTGCTTTCTTTGAGGGTTTTCCTGGAGCAATTAATCGCTTTCCGGACCCTGATGGAAGGAGAACTGAGATAACATGTGCTGCATGTGGTGGGCATTTGGGTCATGTTTTTAAAGGCGAGGGATTCGGGACACCTACAGATGAACGCCATTGTGTCAACAGCATTTCGGTCAAGTTTGCTCCTGCTAATGCTTCACAGTGAAGCCTTTCAGAGGCAGTCATAACCTCAG

Coding sequence (CDS)

ATGATATGCAGGCCTCGTGGCACTGGGAAATATGACAAGTTTTATGAAGAAGGAATATACAACTGTGCAGGCTGTGGAACCCCACTCTATAAGTCAAGCACCAAATTCAATTCTGGCTGTGGCTGGCCTGCTTTCTTTGAGGGTTTTCCTGGAGCAATTAATCGCTTTCCGGACCCTGATGGAAGGAGAACTGAGATAACATGTGCTGCATGTGGTGGGCATTTGGGTCATGTTTTTAAAGGCGAGGGATTCGGGACACCTACAGATGAACGCCATTGTGTCAACAGCATTTCGGTCAAGTTTGCTCCTGCTAATGCTTCACAGTGA

Protein sequence

MICRPRGTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRTEITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANASQ
Homology
[Close]
BLAST of Lsi05G014750 vs. Swiss-Prot
Match: MSRB5_ORYSJ (Peptide methionine sulfoxide reductase B5 OS=Oryza sativa subsp. japonica GN=MSRB5 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 3.7e-51
Identity = 84/99 (84.85%), Postives = 93/99 (93.94%), Query Frame = 1 

Query: 7   GTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRTEI 66
           GTG+Y+KFY +G+YNCAGCGTPLYKS+TKF+SGCGWPAFFEG PGAINR PDPDGRR EI
Sbjct: 38  GTGEYNKFYGDGVYNCAGCGTPLYKSTTKFDSGCGWPAFFEGLPGAINRTPDPDGRRVEI 97

Query: 67  TCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPAN 106
           TCAACGGHLGHVFKGEGF TPTDERHCVNS+S+KF PA+
Sbjct: 98  TCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFTPAS 136

[Close]
BLAST of Lsi05G014750 vs. Swiss-Prot
Match: MSRB3_ORYSJ (Peptide methionine sulfoxide reductase B3, chloroplastic OS=Oryza sativa subsp. japonica GN=MSRB3 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.4e-50
Identity = 85/99 (85.86%), Postives = 91/99 (91.92%), Query Frame = 1 

Query: 7   GTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRTEI 66
           GTG+YDK + EG+Y CAGCGTPLYKSSTKFNSGCGWPAF+EGFPGAI R PDPDGRR EI
Sbjct: 126 GTGEYDKLFAEGVYECAGCGTPLYKSSTKFNSGCGWPAFYEGFPGAIARTPDPDGRRIEI 185

Query: 67  TCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPAN 106
           TCAACGGHLGHVFKGEGF TPTDERHCVNSIS+KF PA+
Sbjct: 186 TCAACGGHLGHVFKGEGFNTPTDERHCVNSISLKFIPAS 224

[Close]
BLAST of Lsi05G014750 vs. Swiss-Prot
Match: MSRB5_ARATH (Peptide methionine sulfoxide reductase B5 OS=Arabidopsis thaliana GN=MSRB5 PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.6e-49
Identity = 82/101 (81.19%), Postives = 92/101 (91.09%), Query Frame = 1 

Query: 7   GTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRTEI 66
           GTG+YDKF+EEGI++C GC TPLYKS+TKF+SGCGWPAFFEG PGAINR PDPDGRRTEI
Sbjct: 36  GTGEYDKFFEEGIFDCVGCKTPLYKSTTKFDSGCGWPAFFEGLPGAINRTPDPDGRRTEI 95

Query: 67  TCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANAS 108
           TCAAC GHLGHVFKGEG+G PTDERHCVNS+S+ F PA +S
Sbjct: 96  TCAACDGHLGHVFKGEGYGNPTDERHCVNSVSISFNPAKSS 136

[Close]
BLAST of Lsi05G014750 vs. Swiss-Prot
Match: MSRB2_ARATH (Peptide methionine sulfoxide reductase B2, chloroplastic OS=Arabidopsis thaliana GN=MSRB2 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 3.9e-48
Identity = 81/99 (81.82%), Postives = 90/99 (90.91%), Query Frame = 1 

Query: 7   GTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRTEI 66
           GTG+Y+K +++GIY CAGCGTPLYKS+TKF+SGCGWPAFF+G PGAI R PDPDGRR EI
Sbjct: 101 GTGEYNKVFDDGIYCCAGCGTPLYKSTTKFDSGCGWPAFFDGLPGAITRTPDPDGRRIEI 160

Query: 67  TCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPAN 106
           TCAACGGHLGHVFKGEGF TPTDERHCVNSIS+KF P N
Sbjct: 161 TCAACGGHLGHVFKGEGFPTPTDERHCVNSISLKFTPEN 199

[Close]
BLAST of Lsi05G014750 vs. Swiss-Prot
Match: MSRB4_ARATH (Peptide methionine sulfoxide reductase B4 OS=Arabidopsis thaliana GN=MSRB4 PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.1e-45
Identity = 77/101 (76.24%), Postives = 87/101 (86.14%), Query Frame = 1 

Query: 7   GTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRTEI 66
           GT +YDKF+EEGI++C GC TPLYKS+TKF++GCGWPAFFEG PGAINR PDPDGRRTEI
Sbjct: 36  GTEEYDKFFEEGIFSCIGCKTPLYKSTTKFDAGCGWPAFFEGLPGAINRAPDPDGRRTEI 95

Query: 67  TCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANAS 108
           TCA C GHLGHV KGEG+ TPTDER CVNS+S+ F PA  S
Sbjct: 96  TCAVCDGHLGHVHKGEGYSTPTDERLCVNSVSINFNPAKPS 136

[Close]
BLAST of Lsi05G014750 vs. TrEMBL
Match: A0A0A0L5Q0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150230 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 8.9e-60
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1 

Query: 5   PRGTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRT 64
           PRGTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRT
Sbjct: 36  PRGTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRT 95

Query: 65  EITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANASQ 109
           EITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANASQ
Sbjct: 96  EITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANASQ 139

[Close]
BLAST of Lsi05G014750 vs. TrEMBL
Match: I1M186_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G212000 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.5e-54
Identity = 95/106 (89.62%), Postives = 101/106 (95.28%), Query Frame = 1 

Query: 2   ICRPRGTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDG 61
           +CR +GTG+Y+KFYEEGIYNCAGCGTPLYKSSTKF+SGCGWPAFFEGFPGAI+R PDPDG
Sbjct: 1   MCRLKGTGEYNKFYEEGIYNCAGCGTPLYKSSTKFDSGCGWPAFFEGFPGAIDRSPDPDG 60

Query: 62  RRTEITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANAS 108
           RRTEITCAACGGHLGHVFKGEGF TPTDERHCVNSISVKF P NAS
Sbjct: 61  RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSISVKFVPGNAS 106

[Close]
BLAST of Lsi05G014750 vs. TrEMBL
Match: C6SXW1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G212000 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 6.2e-53
Identity = 93/102 (91.18%), Postives = 98/102 (96.08%), Query Frame = 1 

Query: 6   RGTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRTE 65
           +GTG+Y+KFYEEGIYNCAGCGTPLYKSSTKF+SGCGWPAFFEGFPGAI+R PDPDGRRTE
Sbjct: 34  KGTGEYNKFYEEGIYNCAGCGTPLYKSSTKFDSGCGWPAFFEGFPGAIDRSPDPDGRRTE 93

Query: 66  ITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANAS 108
           ITCAACGGHLGHVFKGEGF TPTDERHCVNSISVKF P NAS
Sbjct: 94  ITCAACGGHLGHVFKGEGFKTPTDERHCVNSISVKFVPGNAS 135

[Close]
BLAST of Lsi05G014750 vs. TrEMBL
Match: A0A0B2RZ89_GLYSO (Peptide methionine sulfoxide reductase B5 OS=Glycine soja GN=glysoja_007242 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 6.2e-53
Identity = 93/102 (91.18%), Postives = 98/102 (96.08%), Query Frame = 1 

Query: 6   RGTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRTE 65
           +GTG+Y+KFYEEGIYNCAGCGTPLYKSSTKF+SGCGWPAFFEGFPGAI+R PDPDGRRTE
Sbjct: 34  KGTGEYNKFYEEGIYNCAGCGTPLYKSSTKFDSGCGWPAFFEGFPGAIDRSPDPDGRRTE 93

Query: 66  ITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANAS 108
           ITCAACGGHLGHVFKGEGF TPTDERHCVNSISVKF P NAS
Sbjct: 94  ITCAACGGHLGHVFKGEGFKTPTDERHCVNSISVKFVPGNAS 135

[Close]
BLAST of Lsi05G014750 vs. TrEMBL
Match: G7IFP1_MEDTR (Methionine sulfoxide reductase B 2 OS=Medicago truncatula GN=MTR_2g020930 PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 8.1e-53
Identity = 90/102 (88.24%), Postives = 98/102 (96.08%), Query Frame = 1 

Query: 6   RGTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRTE 65
           +GTG+Y+KFYEEG+YNCAGCGTPLYKSSTKF+SGCGWPAFFEGFPGAINR+PDPDGRRTE
Sbjct: 35  KGTGEYNKFYEEGVYNCAGCGTPLYKSSTKFDSGCGWPAFFEGFPGAINRYPDPDGRRTE 94

Query: 66  ITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANAS 108
           ITCAACGGHLGHVFKGEGF  PTDERHCVNS+SVKF P NA+
Sbjct: 95  ITCAACGGHLGHVFKGEGFKVPTDERHCVNSVSVKFIPGNAT 136

[Close]
BLAST of Lsi05G014750 vs. TAIR10
Match: AT4G04830.1 (AT4G04830.1 methionine sulfoxide reductase B5)

HSP 1 Score: 196.4 bits (498), Expect = 8.8e-51
Identity = 82/101 (81.19%), Postives = 92/101 (91.09%), Query Frame = 1 

Query: 7   GTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRTEI 66
           GTG+YDKF+EEGI++C GC TPLYKS+TKF+SGCGWPAFFEG PGAINR PDPDGRRTEI
Sbjct: 36  GTGEYDKFFEEGIFDCVGCKTPLYKSTTKFDSGCGWPAFFEGLPGAINRTPDPDGRRTEI 95

Query: 67  TCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANAS 108
           TCAAC GHLGHVFKGEG+G PTDERHCVNS+S+ F PA +S
Sbjct: 96  TCAACDGHLGHVFKGEGYGNPTDERHCVNSVSISFNPAKSS 136

[Close]
BLAST of Lsi05G014750 vs. TAIR10
Match: AT4G21860.1 (AT4G21860.1 methionine sulfoxide reductase B 2)

HSP 1 Score: 191.8 bits (486), Expect = 2.2e-49
Identity = 81/99 (81.82%), Postives = 90/99 (90.91%), Query Frame = 1 

Query: 7   GTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRTEI 66
           GTG+Y+K +++GIY CAGCGTPLYKS+TKF+SGCGWPAFF+G PGAI R PDPDGRR EI
Sbjct: 101 GTGEYNKVFDDGIYCCAGCGTPLYKSTTKFDSGCGWPAFFDGLPGAITRTPDPDGRRIEI 160

Query: 67  TCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPAN 106
           TCAACGGHLGHVFKGEGF TPTDERHCVNSIS+KF P N
Sbjct: 161 TCAACGGHLGHVFKGEGFPTPTDERHCVNSISLKFTPEN 199

[Close]
BLAST of Lsi05G014750 vs. TAIR10
Match: AT4G04810.1 (AT4G04810.1 methionine sulfoxide reductase B4)

HSP 1 Score: 182.2 bits (461), Expect = 1.7e-46
Identity = 77/101 (76.24%), Postives = 87/101 (86.14%), Query Frame = 1 

Query: 7   GTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRTEI 66
           GT +YDKF+EEGI++C GC TPLYKS+TKF++GCGWPAFFEG PGAINR PDPDGRRTEI
Sbjct: 36  GTEEYDKFFEEGIFSCIGCKTPLYKSTTKFDAGCGWPAFFEGLPGAINRAPDPDGRRTEI 95

Query: 67  TCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANAS 108
           TCA C GHLGHV KGEG+ TPTDER CVNS+S+ F PA  S
Sbjct: 96  TCAVCDGHLGHVHKGEGYSTPTDERLCVNSVSINFNPAKPS 136

[Close]
BLAST of Lsi05G014750 vs. TAIR10
Match: AT4G04800.1 (AT4G04800.1 methionine sulfoxide reductase B3)

HSP 1 Score: 181.0 bits (458), Expect = 3.8e-46
Identity = 76/101 (75.25%), Postives = 84/101 (83.17%), Query Frame = 1 

Query: 7   GTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRTEI 66
           GTG+Y  F +EG+Y C GC  PLYKS+TKFN+GCGWPAFFEG PGAI R  DPDGRR EI
Sbjct: 75  GTGEYVNFDKEGVYGCVGCNAPLYKSTTKFNAGCGWPAFFEGIPGAITRTTDPDGRRIEI 134

Query: 67  TCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANAS 108
            CA CGGHLGHVFKGEGF TPTDERHCVNS+S+KF PA +S
Sbjct: 135 NCATCGGHLGHVFKGEGFATPTDERHCVNSVSLKFTPAASS 175

[Close]
BLAST of Lsi05G014750 vs. TAIR10
Match: AT4G21840.1 (AT4G21840.1 methionine sulfoxide reductase B8)

HSP 1 Score: 170.6 bits (431), Expect = 5.2e-43
Identity = 71/103 (68.93%), Postives = 87/103 (84.47%), Query Frame = 1 

Query: 6   RGTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRTE 65
           RG G++ K +EEG Y+CAGCGT LYKS+TKF+SGCGWPAFF+  PGAI + P+  GRR E
Sbjct: 41  RGKGEFTKKFEEGTYSCAGCGTALYKSTTKFDSGCGWPAFFDAIPGAIKQTPEAGGRRME 100

Query: 66  ITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANASQ 109
           ITCA C GHLGHVFKGEG+ TPTD+RHCVNS+S+KFA A++S+
Sbjct: 101 ITCAVCDGHLGHVFKGEGYSTPTDQRHCVNSVSLKFASADSSK 143

[Close]
BLAST of Lsi05G014750 vs. NCBI nr
Match: gi|659076566|ref|XP_008438749.1| (PREDICTED: peptide methionine sulfoxide reductase B5-like isoform X1 [Cucumis melo])

HSP 1 Score: 244.2 bits (622), Expect = 1.0e-61
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 1 

Query: 1   MICRPRGTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPD 60
           M+CRPRGTGKYDKFYEEGIY+CAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPD
Sbjct: 42  MVCRPRGTGKYDKFYEEGIYHCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPD 101

Query: 61  GRRTEITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANASQ 109
           GRRTEITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANASQ
Sbjct: 102 GRRTEITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANASQ 149

[Close]
BLAST of Lsi05G014750 vs. NCBI nr
Match: gi|449432763|ref|XP_004134168.1| (PREDICTED: peptide methionine sulfoxide reductase B5 [Cucumis sativus])

HSP 1 Score: 237.3 bits (604), Expect = 1.3e-59
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1 

Query: 5   PRGTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRT 64
           PRGTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRT
Sbjct: 36  PRGTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRT 95

Query: 65  EITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANASQ 109
           EITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANASQ
Sbjct: 96  EITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANASQ 139

[Close]
BLAST of Lsi05G014750 vs. NCBI nr
Match: gi|659076570|ref|XP_008438751.1| (PREDICTED: peptide methionine sulfoxide reductase B5-like isoform X2 [Cucumis melo])

HSP 1 Score: 235.3 bits (599), Expect = 4.9e-59
Identity = 103/104 (99.04%), Postives = 104/104 (100.00%), Query Frame = 1 

Query: 5   PRGTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRT 64
           PRGTGKYDKFYEEGIY+CAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRT
Sbjct: 36  PRGTGKYDKFYEEGIYHCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRT 95

Query: 65  EITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANASQ 109
           EITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANASQ
Sbjct: 96  EITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANASQ 139

[Close]
BLAST of Lsi05G014750 vs. NCBI nr
Match: gi|947072063|gb|KRH20954.1| (hypothetical protein GLYMA_13G212000 [Glycine max])

HSP 1 Score: 219.9 bits (559), Expect = 2.1e-54
Identity = 95/106 (89.62%), Postives = 101/106 (95.28%), Query Frame = 1 

Query: 2   ICRPRGTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDG 61
           +CR +GTG+Y+KFYEEGIYNCAGCGTPLYKSSTKF+SGCGWPAFFEGFPGAI+R PDPDG
Sbjct: 1   MCRLKGTGEYNKFYEEGIYNCAGCGTPLYKSSTKFDSGCGWPAFFEGFPGAIDRSPDPDG 60

Query: 62  RRTEITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANAS 108
           RRTEITCAACGGHLGHVFKGEGF TPTDERHCVNSISVKF P NAS
Sbjct: 61  RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSISVKFVPGNAS 106

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BLAST of Lsi05G014750 vs. NCBI nr
Match: gi|351723789|ref|NP_001237547.1| (uncharacterized protein LOC100499893 [Glycine max])

HSP 1 Score: 214.5 bits (545), Expect = 8.9e-53
Identity = 93/102 (91.18%), Postives = 98/102 (96.08%), Query Frame = 1 

Query: 6   RGTGKYDKFYEEGIYNCAGCGTPLYKSSTKFNSGCGWPAFFEGFPGAINRFPDPDGRRTE 65
           +GTG+Y+KFYEEGIYNCAGCGTPLYKSSTKF+SGCGWPAFFEGFPGAI+R PDPDGRRTE
Sbjct: 34  KGTGEYNKFYEEGIYNCAGCGTPLYKSSTKFDSGCGWPAFFEGFPGAIDRSPDPDGRRTE 93

Query: 66  ITCAACGGHLGHVFKGEGFGTPTDERHCVNSISVKFAPANAS 108
           ITCAACGGHLGHVFKGEGF TPTDERHCVNSISVKF P NAS
Sbjct: 94  ITCAACGGHLGHVFKGEGFKTPTDERHCVNSISVKFVPGNAS 135

The following BLAST results are available for this feature:
BLAST of Lsi05G014750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MSRB5_ORYSJ3.7e-5184.85Peptide methionine sulfoxide reductase B5 OS=Oryza sativa subsp. japonica GN=MSR... [more]
MSRB3_ORYSJ1.4e-5085.86Peptide methionine sulfoxide reductase B3, chloroplastic OS=Oryza sativa subsp. ... [more]
MSRB5_ARATH1.6e-4981.19Peptide methionine sulfoxide reductase B5 OS=Arabidopsis thaliana GN=MSRB5 PE=1 ... [more]
MSRB2_ARATH3.9e-4881.82Peptide methionine sulfoxide reductase B2, chloroplastic OS=Arabidopsis thaliana... [more]
MSRB4_ARATH3.1e-4576.24Peptide methionine sulfoxide reductase B4 OS=Arabidopsis thaliana GN=MSRB4 PE=2 ... [more]
BLAST of Lsi05G014750 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5Q0_CUCSA8.9e-60100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150230 PE=4 SV=1[more]
I1M186_SOYBN1.5e-5489.62Uncharacterized protein OS=Glycine max GN=GLYMA_13G212000 PE=4 SV=1[more]
C6SXW1_SOYBN6.2e-5391.18Uncharacterized protein OS=Glycine max GN=GLYMA_13G212000 PE=2 SV=1[more]
A0A0B2RZ89_GLYSO6.2e-5391.18Peptide methionine sulfoxide reductase B5 OS=Glycine soja GN=glysoja_007242 PE=4... [more]
G7IFP1_MEDTR8.1e-5388.24Methionine sulfoxide reductase B 2 OS=Medicago truncatula GN=MTR_2g020930 PE=2 S... [more]
BLAST of Lsi05G014750 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G04830.18.8e-5181.19 methionine sulfoxide reductase B5[more]
AT4G21860.12.2e-4981.82 methionine sulfoxide reductase B 2[more]
AT4G04810.11.7e-4676.24 methionine sulfoxide reductase B4[more]
AT4G04800.13.8e-4675.25 methionine sulfoxide reductase B3[more]
AT4G21840.15.2e-4368.93 methionine sulfoxide reductase B8[more]
BLAST of Lsi05G014750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076566|ref|XP_008438749.1|1.0e-6198.15PREDICTED: peptide methionine sulfoxide reductase B5-like isoform X1 [Cucumis me... [more]
gi|449432763|ref|XP_004134168.1|1.3e-59100.00PREDICTED: peptide methionine sulfoxide reductase B5 [Cucumis sativus][more]
gi|659076570|ref|XP_008438751.1|4.9e-5999.04PREDICTED: peptide methionine sulfoxide reductase B5-like isoform X2 [Cucumis me... [more]
gi|947072063|gb|KRH20954.1|2.1e-5489.62hypothetical protein GLYMA_13G212000 [Glycine max][more]
gi|351723789|ref|NP_001237547.1|8.9e-5391.18uncharacterized protein LOC100499893 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0030091protein repair
GO:0006979response to oxidative stress
Vocabulary: Molecular Function
TermDefinition
GO:0033743peptide-methionine (R)-S-oxide reductase activity
GO:0016671oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
Vocabulary: INTERPRO
TermDefinition
IPR011057Mss4-like_sf
IPR002579Met_Sox_Rdtase_MsrB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0030091 protein repair
biological_process GO:0006979 response to oxidative stress
cellular_component GO:0005575 cellular_component
molecular_function GO:0033743 peptide-methionine (R)-S-oxide reductase activity
molecular_function GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G014750.1Lsi05G014750.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002579Peptide methionine sulphoxide reductase MrsBGENE3DG3DSA:2.170.150.20coord: 5..106
score: 5.0
IPR002579Peptide methionine sulphoxide reductase MrsBPFAMPF01641SelRcoord: 7..103
score: 3.4
IPR011057Mss4-likeunknownSSF51316Mss4-likecoord: 7..105
score: 1.15
NoneNo IPR availablePANTHERPTHR10173:SF19PEPTIDE METHIONINE SULFOXIDE REDUCTASE B2, CHLOROPLASTIC-RELATEDcoord: 9..108
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi05G014750Csa3G150230Cucumber (Chinese Long) v2culsiB199
Lsi05G014750CSPI03G13680Wild cucumber (PI 183967)cpilsiB198
Lsi05G014750Cucsa.253810Cucumber (Gy14) v1cgylsiB420
Lsi05G014750CmaCh14G016620Cucurbita maxima (Rimu)cmalsiB250
Lsi05G014750CmoCh14G017060Cucurbita moschata (Rifu)cmolsiB238
Lsi05G014750Cla021681Watermelon (97103) v1lsiwmB362
Lsi05G014750MELO3C006583Melon (DHL92) v3.5.1lsimeB369
Lsi05G014750ClCG05G005570Watermelon (Charleston Gray)lsiwcgB333
Lsi05G014750MELO3C006583.2Melon (DHL92) v3.6.1lsimedB385
Lsi05G014750Cla97C05G086970Watermelon (97103) v2lsiwmbB330
Lsi05G014750Bhi01G000652Wax gourdlsiwgoB432
Lsi05G014750Cp4.1LG03g10970Cucurbita pepo (Zucchini)cpelsiB512
Lsi05G014750Carg20159Silver-seed gourdcarlsiB761
Lsi05G014750CsaV3_3G013910Cucumber (Chinese Long) v3cuclsiB218
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G014750Watermelon (97103) v2lsiwmbB344
Lsi05G014750Wax gourdlsiwgoB422
Lsi05G014750Bottle gourd (USVL1VR-Ls)lsilsiB006
Lsi05G014750Cucumber (Gy14) v1cgylsiB586
Lsi05G014750Cucurbita maxima (Rimu)cmalsiB353
Lsi05G014750Cucurbita maxima (Rimu)cmalsiB757
Lsi05G014750Cucurbita maxima (Rimu)cmalsiB834
Lsi05G014750Cucurbita moschata (Rifu)cmolsiB342
Lsi05G014750Cucurbita moschata (Rifu)cmolsiB752
Lsi05G014750Cucurbita moschata (Rifu)cmolsiB819
Lsi05G014750Cucurbita pepo (Zucchini)cpelsiB118
Lsi05G014750Cucurbita pepo (Zucchini)cpelsiB273
Lsi05G014750Cucurbita pepo (Zucchini)cpelsiB718
Lsi05G014750Wild cucumber (PI 183967)cpilsiB467
Lsi05G014750Cucumber (Chinese Long) v2culsiB460
Lsi05G014750Melon (DHL92) v3.5.1lsimeB342
Lsi05G014750Watermelon (Charleston Gray)lsiwcgB345
Lsi05G014750Watermelon (97103) v1lsiwmB384
Lsi05G014750Cucumber (Gy14) v2cgyblsiB184
Lsi05G014750Cucumber (Gy14) v2cgyblsiB428
Lsi05G014750Melon (DHL92) v3.6.1lsimedB359
Lsi05G014750Silver-seed gourdcarlsiB065
Lsi05G014750Silver-seed gourdcarlsiB298
Lsi05G014750Silver-seed gourdcarlsiB552
Lsi05G014750Cucumber (Chinese Long) v3cuclsiB489