Lsi05G012460 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi05G012460
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr05 : 20259324 .. 20261169 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTAGAGCTTTCAGACCACCAAAAGTTTTTGGTACCGAACCAGATAATTTATTACCAGTTAAGTTCAACTTTACCAAGCTACTCAAATGACTAAAGCTTTTGGGGATCATGCCCATGAGGTGATTATTCCCAAGATACAGGCCTTGGAGCTTGAGAGCATTGCCAATCTCTGCAGGAATAGGACCAGTAAGCATATTGCCAGATAAATCCAAGGTTGTGAGGTTTGTTAGCTGAGAGAGAGATCTAGGAATTGCTCCAGAAAGTAGATTATTGTTGAGTAAAAGATCCACCACTACAACACAGTTCCCCAGTTCATCAGGTATGGTACCAGACAGTCTATTATGAGACAGATCGAAAACACCATGATGCTGAACAAAGCTCAAATCAGGAATCGTCAACTGTTGAAAATAAGCAGACGGATTGGAAGGTATTTCTCCAGATAAATTGTTGTGTGAAAGAACTAGGCACTGTAATTCAGCAAGGTCTGCAAGTCTTTCTGGAATCGACCCGTTTAGACTGTTGTTTCCAAGGTCCAATGTGGTGAGTTCACTGCAATCTCCAAGCATGGCAGGAATAGTTCCTTCAAGCAGATTTGAATTCAAATTTAGAACAGAAAGGGCTGTGAGATTTCCAATTTCATCTGGTATTATGCCTGTCAACCTGTTGTTGCTGAGAACAAGCCTCTCAAGGGAAGCTGCATAACCAATTTCTGGAGGGAGATGACCCTCTAACTGGTTATTTGCAGCAGAAAATTCCATCAAATTCACTGAGTTCCATATACTTCTTGGTAACGAACCTGTAAAATTGTTGGAGTCAAGGTTGATTACCAGTAGGGGAAGCTCTGAGAAGTACTCTGGTATTGAACCAACAATCTGATTGTCTACCAAAACTAACTGCGTAAGGTTTTTACACAGCACAAATGTGTCATCAATCGTACTCGAAAGGAAATTACTGTCAAGATCAATCTCTGTCAAGGATGCAGCATTACAAAGTTCTTTAGGTATTGGACCTGTCAACAAGTTATTGCTCAAACTAAGGTGATTAAGCATCAAGCAATTTCCAATCTCAGGTGGGATTTCGCCAGTAAACCGATTACTCGAGAGTAAAATAGAATCGACATGATCCCATTTGCCAAGCCAGGAAGGTAATGGACCAGAAAGCTGATTCCTCTCAGCGGAAAATGTCAACATGGAAAGCTCAGAAAGCTCTTGTGGCAACTCCCCAGATAGAAAGTTGAATGAAAGCATCAATGTTTTCAAATTTCTGCATCTCCCAAGCTCAGCAGGAATAGAACCATTAAGCTCAGTGTAAACCAGATTCAATATAGTCAAGTTCTGCAATTCACCAATTGTTTTGGGGATAGAACACCCAAGTGGGTTGTATGAAAGATCCAGTTTGCTCAATGATTTCAACTTGGATAGTTCGTCAGGCAATGGACCAGTTAAAGAACAAGACGTCGAAAAAAAGTTCTCCAGCAATACAAGGTTACCAACTTCAGGAGGCAATGCACCGGAAAAGTGATTAATGCCGATATAAAGGCCAGTCAAATGCTTTAGATTACCAATTTCAGGTGGGATTGAACCCGAAAACGAGTTGTTTGAAATGTCCAGAGAAGTTAAAGATGTAAGCTCAGTGAAGATGGTTAATGGGAGTGAACCTGATAAAAGGTTGTTGCCGAGGTCCAAGGATAAAATCCTCGTCAAGTTTCCGATGTGTGGCGGAACATTTCCGATGAAGGCATTGCCAGAGAGGTCAAGGGTCCGTAACTGCTTCAAATTTCCAAGCTCCGGCGGGATTTTACCAGTGAATAAATTAGTCCCCAACTTGAGATTCTCCAACTGA

mRNA sequence

ATGATTCAACTTTACCAAGCTACTCAAATGACTAAAGCTTTTGGGGATCATGCCCATGAGGTGATTATTCCCAAGATACAGGCCTTGGAGCTTGAGAGCATTGCCAATCTCTGCAGGAATAGGACCAATCCACCACTACAACACAGTTCCCCAGTTCATCAGGTATGGTACCAGACAGTCTATTATGAGACAGATCGAAAACACCATGATGCTGAACAAAGCTCAAATCAGGAATCGTCAACTGTTGAAAATAAGCAGACGGATTGGAAGGTATTTCTCCAGATAAATTGTTGTGTGAAAGAACTAGGCACTGCAATGGACCAGTTAAAGAACAAGACGTCGAAAAAAAGTTCTCCAGCAATACAAGGTTACCAACTTCAGGAGGCAATGCACCGGAAAAGTGGGATTGAACCCGAAAACGAGTTGTTTGAAATGTCCAGAGAAGTTAAAGATGTAAGCTCAGTGAAGATGGTTAATGGGAGTGAACCTGATAAAAGGTTGTTGCCGAGGTCCAAGGATAAAATCCTCGTCAAGTTTCCGATGTGTGGCGGAACATTTCCGATGAAGGCATTGCCAGAGAGGTCAAGGGTCCGTAACTGCTTCAAATTTCCAAGCTCCGGCGGGATTTTACCAGTGAATAAATTAGTCCCCAACTTGAGATTCTCCAACTGA

Coding sequence (CDS)

ATGATTCAACTTTACCAAGCTACTCAAATGACTAAAGCTTTTGGGGATCATGCCCATGAGGTGATTATTCCCAAGATACAGGCCTTGGAGCTTGAGAGCATTGCCAATCTCTGCAGGAATAGGACCAATCCACCACTACAACACAGTTCCCCAGTTCATCAGGTATGGTACCAGACAGTCTATTATGAGACAGATCGAAAACACCATGATGCTGAACAAAGCTCAAATCAGGAATCGTCAACTGTTGAAAATAAGCAGACGGATTGGAAGGTATTTCTCCAGATAAATTGTTGTGTGAAAGAACTAGGCACTGCAATGGACCAGTTAAAGAACAAGACGTCGAAAAAAAGTTCTCCAGCAATACAAGGTTACCAACTTCAGGAGGCAATGCACCGGAAAAGTGGGATTGAACCCGAAAACGAGTTGTTTGAAATGTCCAGAGAAGTTAAAGATGTAAGCTCAGTGAAGATGGTTAATGGGAGTGAACCTGATAAAAGGTTGTTGCCGAGGTCCAAGGATAAAATCCTCGTCAAGTTTCCGATGTGTGGCGGAACATTTCCGATGAAGGCATTGCCAGAGAGGTCAAGGGTCCGTAACTGCTTCAAATTTCCAAGCTCCGGCGGGATTTTACCAGTGAATAAATTAGTCCCCAACTTGAGATTCTCCAACTGA

Protein sequence

MIQLYQATQMTKAFGDHAHEVIIPKIQALELESIANLCRNRTNPPLQHSSPVHQVWYQTVYYETDRKHHDAEQSSNQESSTVENKQTDWKVFLQINCCVKELGTAMDQLKNKTSKKSSPAIQGYQLQEAMHRKSGIEPENELFEMSREVKDVSSVKMVNGSEPDKRLLPRSKDKILVKFPMCGGTFPMKALPERSRVRNCFKFPSSGGILPVNKLVPNLRFSN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G012460.1Lsi05G012460.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G012460Wax gourdlsiwgoB426
Lsi05G012460Wax gourdlsiwgoB434
Lsi05G012460Wax gourdlsiwgoB443
Lsi05G012460Bottle gourd (USVL1VR-Ls)lsilsiB008
Lsi05G012460Bottle gourd (USVL1VR-Ls)lsilsiB160
Lsi05G012460Cucumber (Gy14) v1cgylsiB416
Lsi05G012460Cucumber (Gy14) v1cgylsiB490
Lsi05G012460Cucurbita maxima (Rimu)cmalsiB288
Lsi05G012460Cucurbita maxima (Rimu)cmalsiB312
Lsi05G012460Cucurbita maxima (Rimu)cmalsiB387
Lsi05G012460Cucurbita maxima (Rimu)cmalsiB580
Lsi05G012460Cucurbita maxima (Rimu)cmalsiB836
Lsi05G012460Cucurbita moschata (Rifu)cmolsiB277
Lsi05G012460Cucurbita moschata (Rifu)cmolsiB300
Lsi05G012460Cucurbita moschata (Rifu)cmolsiB372
Lsi05G012460Cucurbita moschata (Rifu)cmolsiB560
Lsi05G012460Cucurbita pepo (Zucchini)cpelsiB035
Lsi05G012460Cucurbita pepo (Zucchini)cpelsiB153
Lsi05G012460Cucurbita pepo (Zucchini)cpelsiB172
Lsi05G012460Cucurbita pepo (Zucchini)cpelsiB624
Lsi05G012460Wild cucumber (PI 183967)cpilsiB208
Lsi05G012460Wild cucumber (PI 183967)cpilsiB379
Lsi05G012460Cucumber (Chinese Long) v2culsiB210
Lsi05G012460Cucumber (Chinese Long) v2culsiB376
Lsi05G012460Melon (DHL92) v3.5.1lsimeB340
Lsi05G012460Melon (DHL92) v3.5.1lsimeB379
Lsi05G012460Watermelon (Charleston Gray)lsiwcgB322
Lsi05G012460Watermelon (Charleston Gray)lsiwcgB336
Lsi05G012460Watermelon (97103) v1lsiwmB366
Lsi05G012460Watermelon (97103) v1lsiwmB373
Lsi05G012460Cucumber (Gy14) v2cgyblsiB197
Lsi05G012460Cucumber (Gy14) v2cgyblsiB342
Lsi05G012460Melon (DHL92) v3.6.1lsimedB357
Lsi05G012460Melon (DHL92) v3.6.1lsimedB397
Lsi05G012460Silver-seed gourdcarlsiB675
Lsi05G012460Silver-seed gourdcarlsiB841
Lsi05G012460Silver-seed gourdcarlsiB852
Lsi05G012460Silver-seed gourdcarlsiB903
Lsi05G012460Cucumber (Chinese Long) v3cuclsiB229
Lsi05G012460Cucumber (Chinese Long) v3cuclsiB399
Lsi05G012460Watermelon (97103) v2lsiwmbB315
Lsi05G012460Watermelon (97103) v2lsiwmbB331
Lsi05G012460Watermelon (97103) v2lsiwmbB334