Lsi05G011990 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTATTTTACTTTTTTTGAAAATTTTAAAATGCAACTTACAGGTTACAGCTTTCATTCGAATCGGAAATCTAATAGTGTGTGTTCGAAAACTCAATCTGAAATTCCAAATTCCAATTCGCTTTTTTTTGGAGTTCAAGAAAGAAAAAAATAAAGGGAGGAATCAGAGACAAAGATTTCGATTTTCGAGTCAAGAAAATTTTGAAATCATAGACAGCGAAAGAGCAAATCATAGTGAAGTAAAAGAGATGACGGTGGCTGAAAGGTTGTTTTGATTGATTTCATTTGAATCCAATTTGATACAACTCATATCCTCGAACTGAGAGACATTCATTGCGAGGCAACTTTCAGGGGAAACCGGTGGCAGATTTAGGGTTTGGTTAATTTTGTTCTCAAATTCTCAGAGAAGAGGAAGAGGAGGAGGAGGAGGACTAGGTTTACAGTTTAGGGTTTTGGTTTTGCGTTTTTCTTGAAAAATGACTGACGTGATACTGCATATATACGACGTCACGAATAGCGGATCAGATAAGACCAACAATACAATTGTTAATATCAACAAGATCTTCAAGGATGGAATTGGTCTAGGCGGTATCTTCCATAGCGCTGTTCAGGTTTCTCGCTTTCTCCTTTGTTTTTCTTTTTCTACGTATTTACATGTTTATGTTGAGTTAGTATTGGCGGTTTCGATTGTGTAATATTGTTACCCTTAGATTTTATCTCCCGTCAATCCGGTATGTTTTTCAGTTTAAGATGAACAATTGACATCTTCATTGGTTTGCAAGTGTGAATGTCAGTGTGGCTAGGTTTTATATTAGCGGGAGCATCTGCTTAATGATCCAGTAGTATTATTATGTGTTGCTCTGATTCAGGTTGATATTGTCTTTAGTAGATAAGACTTGAGAGATTTTGTTCATTCTATCTTTTCCAGTTAGGAATGGTTCTTGTACAGGAGATATTGGACTTTGACTGGAAGTTAAAACTTGATCTATTTGGTTCTTTCTAGATTGTGAGATAACGTTACTTATTCTACTCTACCTTAAGAAATGTGGAATTTTTTGCAATACATTGTTTAATCATTTTTCCGCTCATGTTTCACTCCCATTCTGGCCATGGATGATCATAGATTTTACTCTGAAATTCTGCACGGCAATGTTATTTGCCAAGATATTTGTTATTTCATCTGCTTAACATCGATGATTATGATGTTTTTACATAAGTAAGTCATTACTCTCAAGCGAACTACAAGGCTGATGAAGCTTTCACCATTTTGCAACATTGCGGATCACATTTTCCTGCCCATAATTCCCTACATAGAATTGTGTTTCTTATGGTTTAACGGAGTGTTGGATTAATTGTGCTATGCACTACAGGTCTATGGAGATGATGAATGGTCCTTTGGGTTTTGCGAGCAAGGAACTGGAGTTTTCAGTTGCCCCTCTGGACAGAATCCAATGTACACATTTCGTGAAAGTATCAACCTTGGTAGAACAAACTGTTCAATTTTCAAGGTGAATCAGATTTTAAGAGAGCTTAGTAGAGAGTGGCCTGGAAGTTCGTATGACTTGCTATCAAGAAACTGTAACCACTTTTGTGATCAGTTCTGTGAGATGCTCAATGTATCAAAGCTTCCAGGTATATCTGAGTTCATACCATTATGATTTATAATCATTAGATCTTTGTTTTGAGACAGTTTCTCTGTGCATTTGAGCATTAACTAGATTTATTTTATGATGTTTTATGGAGATAACCACAGAAATATTTTTACACCTATTAGGTTTGCCCCTCAGTAGATATTTGCGTCACCTTGGTTTTAATATAATGTTTATATTGGTTCTACCTTTAAATGGAATCATTTATGATGAAGAGTAGCCTGTATTGCTCTAAAAAGCTCACTGCATTTGTCAATAATAAGTACAGTCTCTTTGAGATATTGAGGCACACGCTTAGGTCGGACCTAGTCTGAGGTCCGACTCTGCAGCACAGCAAACAGAACATTTTGAAGCCTCACATAATCATGTAACAGGCTACTATTTTACATCTTGTGAGGATCATGGCGCATAACTGAGTTTAGGGCGTATTTGAATCATAGATCTTATCAAATACATCTTCATTTTCTTGCTATTTCAGTTCTCTCTCTAACTCTAGTTTTTCTTCTATTAAATTAACTGTTCTCTTCTCTTCTCTGTCATCATTATTTTCTGTCTTTGCAAGTCCGTGAAAGTTGTTACTTTTTCCTAGTTTTTCATTTCCTCCTAACAATTGCTCGCCATTGATTTTCTTTTTCTATATTTTTCCATGTTCTAGTCTGTAATCTTTGTTACAAGTGGTGAAAGGTGTGAAAACAGTGAGAAGTTTCAAGGATGTACTGGTTGTATGATTAAAAGTATTTGATGAAGGTCTGGACTTGACAGTGATGTCATAGGATGAAATAGTGGAGGTAGACTGGTAAAGACTATTTATTCCTAATTGAGATATTATTTGGCAAATACTTGATGATAGACCATGTGAAGACTGATGGGGAAGGATTGTGGGTGTATGTGGGGACTTCTTTTTCCTCTATTTTAACTAGAGGATGTTAATTATTTTTTGGGAGAAAAAGTCTGATGATATTTATCCTGTTGTAGGTTGGGTTAATCGGTTTGCCAATGCTGGTGATGCTGCATTGGAAGTAGCTGGAAACACAGCAGTTCGTGTAAGATTTTTACTGCAACATATAACTGCATAACATTTTACACGTCATAATGAGACTCTTTTTTGGACTGAGCAATCACGCAACATGTTGCATATTTTAAGGGAATTTTACCTCAACTTGCATTAGCTCGGCCCTTTGCATATCAACATATTTCAAAATGTTTCTGTTCTGCAAAGGCAGTACTAATCTTGTTGCCGTTAGGTATGAAGTGTAGGCATGATTGATCCATGCACAATGGTTATACATGAATGATCTGCATGCAATACATTCTTAAGACTTTATGTTATCGTAGGTGTTATGTAATTTGGTCAAATTTTTTGTTACTATTCAACTTCCATTCTGGTTTTTAAGATCCTAAGATTCGTTACCCAAAAGCTAGACAATTTACTCATTTTCCTAGAGAAGAAAATTATAAACTATATACAAAGAGCTGGGTAATTATAATGTGTCATGTGTGTGATGATTGATGAACTAAACGTGCTTTGTTGGTTTTTTTATCGGATGATTGCAGTTCAAACAAGCAAAGACAGAGATCATATCGGCCAGCAAAGTGGCTTACCGTTTTCTACTAGGGGCAACGAACAACGTGATATCTTCTACAGAGTCTACTAGTAATTCAAATAGAGGTACTCCTAGATTTCAAGCTGCATGGTTTAAGAATCTTATTACTACTGGTGCCAAACCATCGAGTAGTTCAGAAATAGGGAATCAAGTTGAAGGTGCACAGCAACAACAACGCAAAGCAAGTGAAGAGACACCAATATTGCTCAATTCGCGATCGCAACATGATATATGAAAGTGTTGTTCTGGAATATTGTTAGGTACAAGTGGAGAAATCGTGTTGATGAACTTAGGTTTATTTGTTTCATTAAGTGTAAAATTTCATTTTTATTACTGAGAAATATATTGATTTGTGTGCGTTTAGGGCGCTGCCCCTTCTTTTGCATCTGATTATATTCTGTGCAGAATCCTACAAAGTCACTGCATAGCAAGTGGGCGAAAGGTGTAAGCTGCTGATCTTTGATAGGTTAGATTAGATAAGATAATGCAACCCATTTCTTGGTTCTATTTTGCTTGAAAGTTCATTTTGCATGGTGTCGCTTGTTTATACACCCGTTTTCTTAGTACCAACTGCTGTATGTAAGCATGGAAATTTGAACGAAATTAGATCTTTAAATTTGGGTTCATCTTTG TTTTATTTTACTTTTTTTGAAAATTTTAAAATGCAACTTACAGGTTACAGCTTTCATTCGAATCGGAAATCTAATAGTGTGTGTTCGAAAACTCAATCTGAAATTCCAAATTCCAATTCGCTTTTTTTTGGAGTTCAAGAAAGAAAAAAATAAAGGGAGGAATCAGAGACAAAGATTTCGATTTTCGAGTCAAGAAAATTTTGAAATCATAGACAGCGAAAGAGCAAATCATAGTGAAGTAAAAGAGATGACGGTGGCTGAAAGGTTGTTTTGATTGATTTCATTTGAATCCAATTTGATACAACTCATATCCTCGAACTGAGAGACATTCATTGCGAGGCAACTTTCAGGGGAAACCGGTGGCAGATTTAGGGTTTGGTTAATTTTGTTCTCAAATTCTCAGAGAAGAGGAAGAGGAGGAGGAGGAGGACTAGGTTTACAGTTTAGGGTTTTGGTTTTGCGTTTTTCTTGAAAAATGACTGACGTGATACTGCATATATACGACGTCACGAATAGCGGATCAGATAAGACCAACAATACAATTGTTAATATCAACAAGATCTTCAAGGATGGAATTGGTCTAGGCGGTATCTTCCATAGCGCTGTTCAGGTCTATGGAGATGATGAATGGTCCTTTGGGTTTTGCGAGCAAGGAACTGGAGTTTTCAGTTGCCCCTCTGGACAGAATCCAATGTACACATTTCGTGAAAGTATCAACCTTGGTAGAACAAACTGTTCAATTTTCAAGGTGAATCAGATTTTAAGAGAGCTTAGTAGAGAGTGGCCTGGAAGTTCGTATGACTTGCTATCAAGAAACTGTAACCACTTTTGTGATCAGTTCTGTGAGATGCTCAATGTATCAAAGCTTCCAGGTTTGCCCCTCAGTAGATATTTGCGTCACCTTGGTTGGGTTAATCGGTTTGCCAATGCTGGTGATGCTGCATTGGAAGTAGCTGGAAACACAGCAGTTCGTTTCAAACAAGCAAAGACAGAGATCATATCGGCCAGCAAAGTGGCTTACCGTTTTCTACTAGGGGCAACGAACAACGTGATATCTTCTACAGAGTCTACTAGTAATTCAAATAGAGGTACTCCTAGATTTCAAGCTGCATGGTTTAAGAATCTTATTACTACTGGTGCCAAACCATCGAGTAGTTCAGAAATAGGGAATCAAGTTGAAGGTGCACAGCAACAACAACGCAAAGCAAGTGAAGAGACACCAATATTGCTCAATTCGCGATCGCAACATGATATATGAAAGTGTTGTTCTGGAATATTGTTAGGTACAAGTGGAGAAATCGTGTTGATGAACTTAGGTTTATTTGTTTCATTAAGTGTAAAATTTCATTTTTATTACTGAGAAATATATTGATTTGTGTGCGTTTAGGGCGCTGCCCCTTCTTTTGCATCTGATTATATTCTGTGCAGAATCCTACAAAGTCACTGCATAGCAAGTGGGCGAAAGGTGTAAGCTGCTGATCTTTGATAGGTTAGATTAGATAAGATAATGCAACCCATTTCTTGGTTCTATTTTGCTTGAAAGTTCATTTTGCATGGTGTCGCTTGTTTATACACCCGTTTTCTTAGTACCAACTGCTGTATGTAAGCATGGAAATTTGAACGAAATTAGATCTTTAAATTTGGGTTCATCTTTG ATGACTGACGTGATACTGCATATATACGACGTCACGAATAGCGGATCAGATAAGACCAACAATACAATTGTTAATATCAACAAGATCTTCAAGGATGGAATTGGTCTAGGCGGTATCTTCCATAGCGCTGTTCAGGTCTATGGAGATGATGAATGGTCCTTTGGGTTTTGCGAGCAAGGAACTGGAGTTTTCAGTTGCCCCTCTGGACAGAATCCAATGTACACATTTCGTGAAAGTATCAACCTTGGTAGAACAAACTGTTCAATTTTCAAGGTGAATCAGATTTTAAGAGAGCTTAGTAGAGAGTGGCCTGGAAGTTCGTATGACTTGCTATCAAGAAACTGTAACCACTTTTGTGATCAGTTCTGTGAGATGCTCAATGTATCAAAGCTTCCAGGTTTGCCCCTCAGTAGATATTTGCGTCACCTTGGTTGGGTTAATCGGTTTGCCAATGCTGGTGATGCTGCATTGGAAGTAGCTGGAAACACAGCAGTTCGTTTCAAACAAGCAAAGACAGAGATCATATCGGCCAGCAAAGTGGCTTACCGTTTTCTACTAGGGGCAACGAACAACGTGATATCTTCTACAGAGTCTACTAGTAATTCAAATAGAGGTACTCCTAGATTTCAAGCTGCATGGTTTAAGAATCTTATTACTACTGGTGCCAAACCATCGAGTAGTTCAGAAATAGGGAATCAAGTTGAAGGTGCACAGCAACAACAACGCAAAGCAAGTGAAGAGACACCAATATTGCTCAATTCGCGATCGCAACATGATATATGA MTDVILHIYDVTNSGSDKTNNTIVNINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQGTGVFSCPSGQNPMYTFRESINLGRTNCSIFKVNQILRELSREWPGSSYDLLSRNCNHFCDQFCEMLNVSKLPGLPLSRYLRHLGWVNRFANAGDAALEVAGNTAVRFKQAKTEIISASKVAYRFLLGATNNVISSTESTSNSNRGTPRFQAAWFKNLITTGAKPSSSSEIGNQVEGAQQQQRKASEETPILLNSRSQHDI
BLAST of Lsi05G011990 vs. Swiss-Prot
Match: PPDEX_ARATH (DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 5.7e-13 Identity = 50/154 (32.47%), Postives = 78/154 (50.65%), Query Frame = 1
BLAST of Lsi05G011990 vs. Swiss-Prot
Match: DESI2_XENLA (Desumoylating isopeptidase 2 OS=Xenopus laevis GN=desi2 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.1e-11 Identity = 39/117 (33.33%), Postives = 61/117 (52.14%), Query Frame = 1
BLAST of Lsi05G011990 vs. Swiss-Prot
Match: DESI2_DANRE (Desumoylating isopeptidase 2 OS=Danio rerio GN=desi2 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 9.1e-11 Identity = 45/151 (29.80%), Postives = 75/151 (49.67%), Query Frame = 1
BLAST of Lsi05G011990 vs. Swiss-Prot
Match: DESI2_CHICK (Desumoylating isopeptidase 2 OS=Gallus gallus GN=DESI2 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.0e-10 Identity = 36/117 (30.77%), Postives = 59/117 (50.43%), Query Frame = 1
BLAST of Lsi05G011990 vs. Swiss-Prot
Match: DESI2_HUMAN (Desumoylating isopeptidase 2 OS=Homo sapiens GN=DESI2 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.0e-10 Identity = 37/125 (29.60%), Postives = 63/125 (50.40%), Query Frame = 1
BLAST of Lsi05G011990 vs. TrEMBL
Match: A0A0A0L9W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G183900 PE=4 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 2.1e-131 Identity = 239/262 (91.22%), Postives = 247/262 (94.27%), Query Frame = 1
BLAST of Lsi05G011990 vs. TrEMBL
Match: M5X8C2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010466mg PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 3.7e-104 Identity = 187/249 (75.10%), Postives = 212/249 (85.14%), Query Frame = 1
BLAST of Lsi05G011990 vs. TrEMBL
Match: W9SGU1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014240 PE=4 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 8.3e-104 Identity = 191/262 (72.90%), Postives = 217/262 (82.82%), Query Frame = 1
BLAST of Lsi05G011990 vs. TrEMBL
Match: I1MPJ0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G179500 PE=4 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 1.6e-102 Identity = 187/238 (78.57%), Postives = 206/238 (86.55%), Query Frame = 1
BLAST of Lsi05G011990 vs. TrEMBL
Match: A0A0B2PJI9_GLYSO (UPF0326 protein OS=Glycine soja GN=glysoja_029076 PE=4 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 1.6e-102 Identity = 187/238 (78.57%), Postives = 206/238 (86.55%), Query Frame = 1
BLAST of Lsi05G011990 vs. TAIR10
Match: AT4G25680.1 (AT4G25680.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 336.3 bits (861), Expect = 1.7e-92 Identity = 167/262 (63.74%), Postives = 203/262 (77.48%), Query Frame = 1
BLAST of Lsi05G011990 vs. TAIR10
Match: AT4G25660.1 (AT4G25660.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 332.8 bits (852), Expect = 1.9e-91 Identity = 164/265 (61.89%), Postives = 203/265 (76.60%), Query Frame = 1
BLAST of Lsi05G011990 vs. TAIR10
Match: AT5G25170.1 (AT5G25170.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 90.9 bits (224), Expect = 1.3e-18 Identity = 61/181 (33.70%), Postives = 87/181 (48.07%), Query Frame = 1
BLAST of Lsi05G011990 vs. TAIR10
Match: AT2G25190.1 (AT2G25190.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 85.9 bits (211), Expect = 4.0e-17 Identity = 69/240 (28.75%), Postives = 116/240 (48.33%), Query Frame = 1
BLAST of Lsi05G011990 vs. TAIR10
Match: AT1G80690.1 (AT1G80690.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 84.7 bits (208), Expect = 9.0e-17 Identity = 45/117 (38.46%), Postives = 69/117 (58.97%), Query Frame = 1
BLAST of Lsi05G011990 vs. NCBI nr
Match: gi|449446001|ref|XP_004140760.1| (PREDICTED: deSI-like protein At4g17486 [Cucumis sativus]) HSP 1 Score: 476.5 bits (1225), Expect = 3.0e-131 Identity = 239/262 (91.22%), Postives = 247/262 (94.27%), Query Frame = 1
BLAST of Lsi05G011990 vs. NCBI nr
Match: gi|659077604|ref|XP_008439288.1| (PREDICTED: deSI-like protein At4g17486 [Cucumis melo]) HSP 1 Score: 475.7 bits (1223), Expect = 5.1e-131 Identity = 243/264 (92.05%), Postives = 247/264 (93.56%), Query Frame = 1
BLAST of Lsi05G011990 vs. NCBI nr
Match: gi|1009123201|ref|XP_015878415.1| (PREDICTED: desumoylating isopeptidase 2-like [Ziziphus jujuba]) HSP 1 Score: 404.1 bits (1037), Expect = 1.9e-109 Identity = 202/257 (78.60%), Postives = 225/257 (87.55%), Query Frame = 1
BLAST of Lsi05G011990 vs. NCBI nr
Match: gi|1009175902|ref|XP_015869141.1| (PREDICTED: desumoylating isopeptidase 2-like [Ziziphus jujuba]) HSP 1 Score: 403.7 bits (1036), Expect = 2.5e-109 Identity = 201/257 (78.21%), Postives = 225/257 (87.55%), Query Frame = 1
BLAST of Lsi05G011990 vs. NCBI nr
Match: gi|657969807|ref|XP_008376635.1| (PREDICTED: deSI-like protein At4g17486 [Malus domestica]) HSP 1 Score: 388.7 bits (997), Expect = 8.3e-105 Identity = 190/256 (74.22%), Postives = 216/256 (84.38%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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