Lsi05G011170 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi05G011170
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr05 : 18958483 .. 18960492 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGTATTTTGCTTGAAACTTGTTGTATGATGCCACTGAAGAATATGTCAACTTCCTTTGTTTAGCATTTCCTTCTTGTCTTTCTGAGTCTGAAGCTTATTTTCTGTTGTTTACTGTTTGCTTGCAAAGGTTTATTGGGAGTAAAAATTTATTCTATGGTTTTTTCTCTCCTTGAACTTCATTAATGGACTGACTTCTAGTTTCCCATGAAGGAGATGAGACTTTATAAAATTTGAGCATGTGTACCTCGCTTGCACACTTGCACCTGTTATTTGACATCCCCCTCTTGATCCCAAAAACTACACGAAAACAATCTTTTCTCGAGTACGACAATTACATAGATGAGAGATCGGACCTCCAACTACAAGGGAGGGAATACATGCCAATTAGCACTGAGTCAAGAACATTTAAAGCATACAATTTTTAACAGAGAAAAAAATTACGATAAAATATTATGTTGGTCTTGGTACTTTGGACTACATTCTATTTTAGTCTTAGTGTTTTCGTTTATCCCAATTTAGTTGAAAATAGTCTCTAAAGTTAGTTTATTGTTGATTTTTCAAAAAGAAAAAAAGAAAAAAATTGTTATTAGCATTCCCTTTATATATTCAGTCTTTTCTTACATGAAATTATATTATTATTTAACTAATTCAATAAAAATCAATTTTGAATGACTAAATTTAATATTTATTCAAANCGAAAATAGTCTCTAAAGTTAGTTTATTGTTGATTTTTCAAAAAGAAAAAAGAAAAAAATTGTTATTAGCATTCCCTTTATATATTCAGTCTTTTCTTACATGAAATTATATTATTATTTAACTAATTCAATAAAAATCAATTTTGAATGACTAAATTTAATATTTATTCAAAGTACATACACTAAACTTAGACAATTGAAAATATAAAGACTAAAATGAAATGAAATTCAATATACATAGACCAAAATAATATTTAACCTTCTTTTTAAATAAATCAACCAGAAAATTGAGATTAGATTAAAAATGATGATGAAAACTGTTTTGAAGAAGACAAGAAGTCTGCATTAAAAGATGCAAAATGAGCAGGAAAATGAGAAGCAAATAAAATAATCTTTGAGTTTGTGATGATGAAACTGTTCTTTTATGGATTATTGAGATGATTTTTTGAATGTTAATCAAAAAGTGAAATCAAGTGATAGGATCTTAGTTATGAATTTGTCAAAAACATAGTAATTTATACCAATAAGAAACATTCTAAACAATGGCATTTTGAACATTTAAGAAAAAGTTGGTCTATAACATTCAATACTATTGAGATTTAGTTACCAAAAACATCATCAACAATGAAGAGTTCTTGGCAATACTAATCATTTACAAATTACAAGTAGATTAAAAAAAGAAAAAAGAAGAAGAACTTGCATTATACTTAACAAAGAAAAGAGACTCTGCATTGCACTGAGTGATGTAAATTGGAACTATTCTGCACTTGTACATGTTCTTTCAATCACTTTAGAATCTGTCCTCTGTGAATGTTTTGATGGCGAACTCGAACCCCTTGAAGAGCTATGCCCAAAAAAGCTCATTTTACTAAATTTCCTTGAGAAAGAACTCATAAATTTACGAGAACTGGACTTTTGCATATCCCTCCTCATACAAACATGTTCTTTTTCAAGATCATTCAATCTCATCCGTAGCCGAGTCAGTTCAAGTTTTAATTCGCGATTTTCTCGTCTAAGTGATGCATAATTGTCTCGTGGAGACATTGCTGCACTCAATGCACCACTACTAATCCGCCATGTTTGGTGTGAAGGTTTGTAGTCTTCGTCACCGCAAGAATTCGACAATGCATTACGAAGCCTTAGTTGCTCGAAATAAAGGACTTGAACCATACATTGGAGAGGAAGGCGCTCATTTTGAGCCGCATGAGCACCGGCCTCCGGTGAGAGCTTCTGAAAATCTATTAGTTTGCAAAGCTTCTTCTTGTCTAAATCTGGTAGACCTTGATGAGCCTGTGGCAAACCAAAAATAA

mRNA sequence

ATGAGTGTTTGTAGTCTTCGTCACCGCAAGAATTCGACAATGCATTACGAAGCCTTAGTTGCTCGAAATAAAGGACTTGAACCATACATTGGAGAGGAAGGCGCTCATTTTGAGCCGCATGAGCACCGGCCTCCGGTGAGAGCTTCTGAAAATCTATTAGTTTGCAAAGCTTCTTCTTGTCTAAATCTGGTAGACCTTGATGAGCCTGTGGCAAACCAAAAATAA

Coding sequence (CDS)

ATGAGTGTTTGTAGTCTTCGTCACCGCAAGAATTCGACAATGCATTACGAAGCCTTAGTTGCTCGAAATAAAGGACTTGAACCATACATTGGAGAGGAAGGCGCTCATTTTGAGCCGCATGAGCACCGGCCTCCGGTGAGAGCTTCTGAAAATCTATTAGTTTGCAAAGCTTCTTCTTGTCTAAATCTGGTAGACCTTGATGAGCCTGTGGCAAACCAAAAATAA

Protein sequence

MSVCSLRHRKNSTMHYEALVARNKGLEPYIGEEGAHFEPHEHRPPVRASENLLVCKASSCLNLVDLDEPVANQK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G011170.1Lsi05G011170.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi05G011170CmoCh19G001810Cucurbita moschata (Rifu)cmolsiB470
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G011170Watermelon (97103) v2lsiwmbB335
Lsi05G011170Watermelon (97103) v2lsiwmbB346
Lsi05G011170Wax gourdlsiwgoB428
Lsi05G011170Wax gourdlsiwgoB459
Lsi05G011170Bottle gourd (USVL1VR-Ls)lsilsiB017
Lsi05G011170Bottle gourd (USVL1VR-Ls)lsilsiB106
Lsi05G011170Bottle gourd (USVL1VR-Ls)lsilsiB156
Lsi05G011170Cucumber (Gy14) v1cgylsiB082
Lsi05G011170Cucumber (Gy14) v1cgylsiB241
Lsi05G011170Cucumber (Gy14) v1cgylsiB417
Lsi05G011170Cucurbita maxima (Rimu)cmalsiB247
Lsi05G011170Cucurbita maxima (Rimu)cmalsiB486
Lsi05G011170Cucurbita maxima (Rimu)cmalsiB585
Lsi05G011170Cucurbita maxima (Rimu)cmalsiB769
Lsi05G011170Cucurbita moschata (Rifu)cmolsiB235
Lsi05G011170Cucurbita moschata (Rifu)cmolsiB565
Lsi05G011170Cucurbita moschata (Rifu)cmolsiB761
Lsi05G011170Cucurbita pepo (Zucchini)cpelsiB209
Lsi05G011170Cucurbita pepo (Zucchini)cpelsiB214
Lsi05G011170Cucurbita pepo (Zucchini)cpelsiB616
Lsi05G011170Cucurbita pepo (Zucchini)cpelsiB716
Lsi05G011170Wild cucumber (PI 183967)cpilsiB199
Lsi05G011170Wild cucumber (PI 183967)cpilsiB213
Lsi05G011170Cucumber (Chinese Long) v2culsiB200
Lsi05G011170Cucumber (Chinese Long) v2culsiB215
Lsi05G011170Cucumber (Chinese Long) v2culsiB526
Lsi05G011170Melon (DHL92) v3.5.1lsimeB353
Lsi05G011170Melon (DHL92) v3.5.1lsimeB382
Lsi05G011170Watermelon (Charleston Gray)lsiwcgB317
Lsi05G011170Watermelon (Charleston Gray)lsiwcgB337
Lsi05G011170Watermelon (Charleston Gray)lsiwcgB348
Lsi05G011170Watermelon (97103) v1lsiwmB357
Lsi05G011170Watermelon (97103) v1lsiwmB367
Lsi05G011170Cucumber (Gy14) v2cgyblsiB185
Lsi05G011170Cucumber (Gy14) v2cgyblsiB204
Lsi05G011170Cucumber (Gy14) v2cgyblsiB494
Lsi05G011170Melon (DHL92) v3.6.1lsimedB368
Lsi05G011170Melon (DHL92) v3.6.1lsimedB398
Lsi05G011170Silver-seed gourdcarlsiB266
Lsi05G011170Silver-seed gourdcarlsiB717
Lsi05G011170Silver-seed gourdcarlsiB879
Lsi05G011170Cucumber (Chinese Long) v3cuclsiB219
Lsi05G011170Cucumber (Chinese Long) v3cuclsiB234
Lsi05G011170Cucumber (Chinese Long) v3cuclsiB560