Lsi05G010840 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi05G010840
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr05 : 18500826 .. 18505493 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTATGCTTAAATTCAAATTGAATTATGATCATGTCCACATCATATACTTAAAACTAATTAATTATTATATATTAGAATTTATTGAACACAAAATGAAAAAAAAAAGAGAATTTTTAAAAATAGAAAACTTAAGGAAACTATTTACACAAAATAACAAAATTTTTAGATAGTTGTGATAGACACTGATAGAAGTCTATTAAAGTCTATTAGTGATAGAAATTAGATGCTGATAGAAGTCTATCAATGTCTATTAGTATTTTTTTTTTTTTTGTTATTTTTATAAATAGTTTGACATTTTTTTCATGTATGAAAATTTTACAAAATATATATATATATATATATTTTGTTTTATCGCTATTGCATTAGAAATTGTTATTCATTTTAGAAATCATTCTTACATCATTATTGGAAAAACAAGTTATTCAATTAATAAGTTACCATTAATGTGTTATATTTCTAAAAGAAGGGAAATACTGAATAGTACATCGGCAATAAGGTGGAGAAATCTTAACCAATAAAATTCATTATTATTTGATTGTAATTATATATAGTAATACCACCATATGTTGAGGTTGGCATATATATAATATATACATATATATATGCATGTCTCCATATTTGTAAACTTATTTAATGTCACAAAGCTTATATAATGGGTGGCAAGAAAGAAACTAACCACATCCCAAAACAAACCATTTTACAATATTAATAGAACATAATGGCAAAGAAACTTAGTCTCAAGTTTGCTTTCATTGTTGTCATGATGCTACTTGCTGTGTTTGCCTATGGTAATTACTTTCAAACTCACTTCTTTTTTCTTCTCTCAGATCCATTTGCTCATGATATTTCAATTTTATTAAAATATCGATGGAGATATCGGTAAAATAGTTATATCGATTGGTATATTTTTTTGAAAAAAAATACATTTTTATTCCTAGGTTTTAGATTTAGTTTCTATTTTAGCCATAAGTTTTAAAACTTTACACTTTTAGTCCTTAAATTTTGAGTTGGTTTCGATTTAGTCCCTATATTTAAAGATGTTACAATTTTACTCCTGAGATTTCAGTTTTGTTTCAATTTAGTTCTTAATCTTCAAGATTTACATTTTTCACTTCGATTTTTCACTAAATATACGTGTAGCCACCTATTTTTATTCGGCTTTATTTAAATTAATTTATTTTTAGATTGATTTTTATCTTAATTTTCTTAATCTAATTTTGATTATTTAGCCACATTTTTATACTAATTTGTAGCTTTTATTTTAGTTTAGTTAAAGTAACCAATTTGGTTAGGGTAAAAAAAAAAAAAAAAAACAAAGCAAATGTGGAAAAATTTTGAATTTCGTTTTAATTGCCTAAAAGTTTCATTCTTTTTTTAGCTTAGGCTATTGTTGGCAAAAACTTCAAATTTGGAATAAAATTCATTAAAAAAGAAAAATACAAATATGGAATTGTTTTGAGTTTTATAAACTCATCTTTCTCCACACAAAAAATCCTAAGTTGCTCCATCCACAACAGCCCCCACACCCATTTTCTCTTCCACAAAAAAACCTAGCCACCACACCCATTTTCTTTCTTCTCTTCTTCAGCAAATAGAGAGAGCACACAGAAGCAAATAGAGAGAGAGCTCTAGCTTCGTTGGAGGTTGCATTTGGTAGGGCATTCGTCCCAAGGATTCGCAGCTCAGACAACGGGCGGCTTCGTGCTTTGGATCTTAACCTTCAATCTTCTTCTTCTCTCTTAGATCTAAAAATAGAGAGAAAGAAAAGGTTTATAAAGAAGAATAATTTCATTTACGATTATTTCTTTCCGTTTTGTATTTATCTTTATTATGTGAATGTAGATCTACTGTTTTGTCTATTTCTTTCATCTTATTTCATCTTCTCCTTCATCATACATTCTTTTTTTTAGTTCTTTTTGTAAGTAAAATATGTGTTTTTTTTTTATTAAAAAAAACAGAAGTGAAAATAAAGGAAATAGAGTAACATACCTTAGAACGAGTGATTTTACTGTGATAAAAAGAAATGAACCACTTGTTGAGTTGCTTGTTAAAAAAAAGGGTTAGAAAGATCTTAAGTTGAAGAAGAAGAGGAAAGAAAAAGAGAGGTTGAAGAGAGGTGTTTGAATAGAAGTTTTTAGAGAAGTTTTTTAAAAAAATATGTATATATTTATTATTTATTTATTTATTATTATTATTATTATTATTATTATTATTTAGTTATATATATATATATATATATATATATATATATATATATATTTGTGAGAGTTGAGATGGCTTGTGGCCCATCAGTTTATTTAATTTAATTAAAAAGAAAATTTTAGTTATTTATTATTTTATCATTATTATTATTATTATTAAAATATTTATATATATTTAGATGGGATTATTATTATTTTCAAATTTTTTTAGGTCCCGTCAGCGGTAGTGCCATTGACGCACTCAACCTCTTTATTTATTTATTTATTTATTGTTTATTTTATTTATTTTATCATTTTGTATTTTTTTTTATTTTGAGTATTATACTTATTTTTTTTTTACTTTTCAAGCATTATATTGTGATATGTATTAAAATTTATTATGCATTCATTCTTAATCTTTTATTTGCACTTTTTTTTAACAAAAAATCGACGATGAAATCTAGATAATTTGGGAGTTCGATTTTCTTGAATTCTTGAGGTGAGGAGTCGATTCTCTAGGAGTCCGAGGTCGATCTCCAATATGTTTTCATTAAATTTTTAATGTGTCGTTTTATGTTTATTTAATATTATGCTTCTTAAATTATACTCGTTTATGTAATGTCCACATTTAAGTTGATTTTAATTTCTAGTTAACATTTCTTTTAAGTTTTTTTTTAAAAAAATCTTTTATTATTAAAACTCTTTTAAACACATTTAAAATATATATTTTTTAAAATACATTTTTTTTACCTTTAAAAAATTATTTCTAAAGATTTTCTAATTAACTTTTCTAAGAACTTGTTTTTAAAACTGTTTTGCTTAAAAAAAATTTCTAAGATGGAATCTAAGAAATTTGGGAGTCTGATTTCCTAGAATTCTTGAGGTGAGGAATCACATTTTTGGAAGTACGAGATTTGATCCAAAAAAAAAAAATTAATCAATGTTTTAAAAATTTTAGTAAAAGGCTATTCCTATGACAGATTTTGGGAAATTAAAATAATTTCTCAAATTCTTGAGGTGAGGAATTTTTCCTCAAATTTTTAATATAGTCAAATTGATGGAAAATTTTTCACTTATTCTTTGGATCATTACTTTAAATATTGGAGTAATGAGGGATAAAATAAGACATTTGTTTTAAAAAAAAATTCTTCCTAAATGATTTTCTTTAAAGAAATATTTTTTTAATTCAAGATAAAATGATTTGGCCACCGTTTTCTAAACGGGTGTTGTGGGGTGCTAATACCTTCCCCATACACAAATGACTCCCGAACCCAACTCTAGTTTTCGCAAACCATTTCCATTGATTTTTACTTAAAAATTATTTACTTTATTTCGGTGTCCAATCATACCGTAAAAAAGATTGGTGGCGGCTCCTTTTTTATTTTCTTTTAAAATTAACCCTTTTTAAGGACGTCGACCGCTCCGCGTCGTCTCAGGCACGTGGCGACAATACGTACTCACTTTCTATCTTTCCCATTAAAGTCTATTTTTTATAGTCTATTTTTCAATTAAAATAATTATGAAGTGAAAATTTAAATTTCATTTTAATAATGATGAAAAGTAGTGTGACACAAAAAATTATAATTCTTTTAAATTAACTAATAGACACTACCTCTAGAGATAGAGACGGAGTATTTAGTTAAAATTGAGATTAGAAGTATAAATCTTAAAACCTCTAGGACAAAATTGAAACAAAACTCAAATTTGAAGGACAAAATTGTAACATTTTGAAACCTAATTAGAGACTAAATTGAAATCAAACCAAAAAAAATTAAAAAATAAAAGTGTAACATTTCAAAACTTAGGACCAACAAATATAAACTTAAACTCTAGGGACTTTTCCTCTATATTTTTTAAACAATAAAAAATCCGGTAGATTTGTAAAAAGGAAATTAAATTAACTTATAAATGCTTAACTCCATTTGATAAAAATTCTTTATTATTTATATTATGTCTGTATATATTTTTTTAATTCAATAGGGGTAGGAATTCAAACAACAGACTCCTTATTCGTCAACACATCAATATATCACTTAAACTATGCTTATTTTGGCATATTACGTCTATATATTTAGTACTATTTCTTTGAGTCTTTTTTATATATACTTAATATATATATATATATATATTTTTGCTATGTAATGAAAATATCGATTCATTTCTTAATAATGGTTGTGTCGAAATTATAAATATATTGGCCATAATGGAAATTTAATATATTTTGATTTTATGCAAATGGATGTGACTAAAAATTTGGAAACATTTGTTTGCAGTTGAAGGCAGACCATTGGGATCAAAGGGAAGCACTTTGGCAGAAAAGCATTGCAAAGTCAATGCTGATTGCAAACAACTTTCCTGTATATGCTACAATCATTCATGCTTATGTGACAAAACACTGAGTAAAAACTCTAACAACATCATCAATGATATGCAACTTCAAGAGCTCAAAGGAAAAGATCTCAAGAATTAAGTGCCAAATTAC

mRNA sequence

ATGAAAAACATAATGGCAAAGAAACTTAGTCTCAAGTTTGCTTTCATTGTTGTCATGATGCTACTTGCTGTGTTTGCCTATGTTGAAGGCAGACCATTGGGATCAAAGGGAAGCACTTTGGCAGAAAAGCATTGCAAAGTCAATGCTGATTGCAAACAACTTTCCTGTATATGCTACAATCATTCATGCTTATGTGACAAAACACTGAGTAAAAACTCTAACAACATCATCAATGATATGCAACTTCAAGAGCTCAAAGGAAAAGATCTCAAGAATTAAGTGCCAAATTAC

Coding sequence (CDS)

ATGAAAAACATAATGGCAAAGAAACTTAGTCTCAAGTTTGCTTTCATTGTTGTCATGATGCTACTTGCTGTGTTTGCCTATGTTGAAGGCAGACCATTGGGATCAAAGGGAAGCACTTTGGCAGAAAAGCATTGCAAAGTCAATGCTGATTGCAAACAACTTTCCTGTATATGCTACAATCATTCATGCTTATGTGACAAAACACTGAGTAAAAACTCTAACAACATCATCAATGATATGCAACTTCAAGAGCTCAAAGGAAAAGATCTCAAGAATTAA

Protein sequence

MKNIMAKKLSLKFAFIVVMMLLAVFAYVEGRPLGSKGSTLAEKHCKVNADCKQLSCICYNHSCLCDKTLSKNSNNIINDMQLQELKGKDLKN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G010840.1Lsi05G010840.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G010840Bottle gourd (USVL1VR-Ls)lsilsiB106
Lsi05G010840Bottle gourd (USVL1VR-Ls)lsilsiB156
Lsi05G010840Cucumber (Gy14) v1cgylsiB082
Lsi05G010840Cucumber (Gy14) v1cgylsiB225
Lsi05G010840Cucumber (Gy14) v1cgylsiB417
Lsi05G010840Cucurbita maxima (Rimu)cmalsiB247
Lsi05G010840Cucurbita maxima (Rimu)cmalsiB486
Lsi05G010840Cucurbita maxima (Rimu)cmalsiB585
Lsi05G010840Cucurbita maxima (Rimu)cmalsiB769
Lsi05G010840Cucurbita maxima (Rimu)cmalsiB837
Lsi05G010840Cucurbita moschata (Rifu)cmolsiB235
Lsi05G010840Cucurbita moschata (Rifu)cmolsiB470
Lsi05G010840Cucurbita moschata (Rifu)cmolsiB565
Lsi05G010840Cucurbita moschata (Rifu)cmolsiB761
Lsi05G010840Cucurbita moschata (Rifu)cmolsiB821
Lsi05G010840Cucurbita pepo (Zucchini)cpelsiB209
Lsi05G010840Cucurbita pepo (Zucchini)cpelsiB270
Lsi05G010840Cucurbita pepo (Zucchini)cpelsiB616
Lsi05G010840Cucurbita pepo (Zucchini)cpelsiB716
Lsi05G010840Wild cucumber (PI 183967)cpilsiB199
Lsi05G010840Wild cucumber (PI 183967)cpilsiB213
Lsi05G010840Cucumber (Chinese Long) v2culsiB200
Lsi05G010840Cucumber (Chinese Long) v2culsiB215
Lsi05G010840Cucumber (Chinese Long) v2culsiB526
Lsi05G010840Melon (DHL92) v3.5.1lsimeB356
Lsi05G010840Melon (DHL92) v3.5.1lsimeB382
Lsi05G010840Watermelon (Charleston Gray)lsiwcgB317
Lsi05G010840Watermelon (Charleston Gray)lsiwcgB337
Lsi05G010840Watermelon (Charleston Gray)lsiwcgB348
Lsi05G010840Watermelon (97103) v1lsiwmB357
Lsi05G010840Watermelon (97103) v1lsiwmB367
Lsi05G010840Cucumber (Gy14) v2cgyblsiB185
Lsi05G010840Cucumber (Gy14) v2cgyblsiB204
Lsi05G010840Cucumber (Gy14) v2cgyblsiB494
Lsi05G010840Melon (DHL92) v3.6.1lsimedB398
Lsi05G010840Silver-seed gourdcarlsiB066
Lsi05G010840Silver-seed gourdcarlsiB717
Lsi05G010840Silver-seed gourdcarlsiB879
Lsi05G010840Cucumber (Chinese Long) v3cuclsiB219
Lsi05G010840Cucumber (Chinese Long) v3cuclsiB234
Lsi05G010840Cucumber (Chinese Long) v3cuclsiB560
Lsi05G010840Watermelon (97103) v2lsiwmbB335
Lsi05G010840Watermelon (97103) v2lsiwmbB346
Lsi05G010840Watermelon (97103) v2lsiwmbB355
Lsi05G010840Wax gourdlsiwgoB459