Lsi05G010770 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G010770
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Plant self-incompatibility protein S1 family
Location	chr05 : 18360053 .. 18360973 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGTGAGATTAAAATTTTCCATATACAAATTCATTATGATTATATATAAATGGTTGATATTCAAGATTGAAAATGAAAAACACAAAACAAATTCTTTAAAGCCAAAAATGAAAACTATGAATAGTGTTTGTGTGATTTTGCTATTTGTGATTGCATCAACTTGTAATGTCAAAAACTTGTTTAGCAGCATATTTCAAGAACGACCAAGTCCCCGGATCGTCTTGGAAAGTGACAATTCTTAACTATCAGAAAGATGCAACTCTAACGGTTCATTGTAAGTCCAAAGACAACGATTTAGGTAAGTGTTCGGATTCTTTTTTTTTTTTTTCTTTTAGTTCAACTACGACATGTCAGTGGAGATTTTTTCAATTTTGTTCATGCATGTTTGAGAGTGAATTTGAAATTGTTAGAATCACGTTTGTTATGTTCAAAATCATTCTAAAACACGTCTTTAATCACTCAAAATTAATTTAATATTTCATTTTACGTTAAAGACATGTCTCGGAGTGATTTTGAAAACGTCAAATTTAATTATAACCATTTCAGAATCACTCCTAAATAGGCGTGATTATGGATATATATGATTTTTCCCCTTTTTTTTTTATATTGAAATTTTGATCCCCATATTAAACTAAAAGTTCTTAAAATAGGCGTGCATGTCCTTAACTTCAAAGGCATATACAACTGGCAATTCAAGGAGAATTTGTTGCAAACAACATTGTTTTGGTGCAACTTTAATAGCACCAAATATGGGCATGCTTCATTCGAGGTCTTCTGGCCAGAGAACGGGACGTGGCTTTCGGATCGATGCAACGATAGAAACTGTATTTGGGTTGCTGATGAAAAGGGTTTTTCCTTGTTTAATATTTCTCAACAAAATTACGAGTTCCAGCATCCATGGACGCCTGGTAGCTAA

mRNA sequence

ATGGAAACATATTTCAAGAACGACCAAGTCCCCGGATCGTCTTGGAAAGTGACAATTCTTAACTATCAGAAAGATGCAACTCTAACGGTTCATTGTAAGTCCAAAGACAACGATTTAGGCGTGCATGTCCTTAACTTCAAAGGCATATACAACTGGCAATTCAAGGAGAATTTGTTGCAAACAACATTGTTTTGGTGCAACTTTAATAGCACCAAATATGGGCATGCTTCATTCGAGGTCTTCTGGCCAGAGAACGGGACGTGGCTTTCGGATCGATGCAACGATAGAAACTGTATTTGGGTTGCTGATGAAAAGGGTTTTTCCTTGTTTAATATTTCTCAACAAAATTACGAGTTCCAGCATCCATGGACGCCTGGTAGCTAA

Coding sequence (CDS)

ATGGAAACATATTTCAAGAACGACCAAGTCCCCGGATCGTCTTGGAAAGTGACAATTCTTAACTATCAGAAAGATGCAACTCTAACGGTTCATTGTAAGTCCAAAGACAACGATTTAGGCGTGCATGTCCTTAACTTCAAAGGCATATACAACTGGCAATTCAAGGAGAATTTGTTGCAAACAACATTGTTTTGGTGCAACTTTAATAGCACCAAATATGGGCATGCTTCATTCGAGGTCTTCTGGCCAGAGAACGGGACGTGGCTTTCGGATCGATGCAACGATAGAAACTGTATTTGGGTTGCTGATGAAAAGGGTTTTTCCTTGTTTAATATTTCTCAACAAAATTACGAGTTCCAGCATCCATGGACGCCTGGTAGCTAA

Protein sequence

METYFKNDQVPGSSWKVTILNYQKDATLTVHCKSKDNDLGVHVLNFKGIYNWQFKENLLQTTLFWCNFNSTKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPWTPGS

Homology

[Close]

BLAST of Lsi05G010770 vs. TrEMBL
Match: A0A0A0KA40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G007430 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.3e-37
Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = 1


Query: 9   QVPGSSWKVTILNYQKDATLTVHCKSKDNDLGVHVLNFKG-IYNWQFKENLLQTTLFWCN 68
           Q+P + W VTI+NYQ +A+L VHCKSKD+DLGVHV+  +G  Y+W FKEN LQTT +WC+
Sbjct: 32  QLPLTDWTVTIINYQINASLQVHCKSKDDDLGVHVIQNEGEHYSWGFKENWLQTTKYWCD 91

Query: 69  FNSTKYGHASFEVFWPENGTWLSDRC-NDRNCIWVADEKGFSLFNISQQNYEFQHPW 124
           F S K GHASFEVFWPE GTW SDRC ++ NC+WVA   GFSL N   +  EFQHPW
Sbjct: 92  FQS-KLGHASFEVFWPERGTWFSDRCGSNSNCVWVAAHDGFSLLNAPAKTLEFQHPW 147

[Close]

BLAST of Lsi05G010770 vs. TrEMBL
Match: M5VN50_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024219mg PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 6.2e-20
Identity = 48/103 (46.60%), Postives = 63/103 (61.17%), Query Frame = 1


Query: 27  TLTVHCKSKDNDLGVHVLNFKGIYNWQFKENLLQTTLFWCNFNSTKYGHASFEVFWPEN- 86
           TL  HCKSKD+DLG+  +     +NW FKEN   TTLFWCN ++  + HA+F+VFW E+ 
Sbjct: 6   TLVAHCKSKDDDLGIRDVLPGNEFNWGFKENFGGTTLFWCNIHN-NHQHANFQVFWHEDE 65

Query: 87  --GTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPWTPG 127
              +WL  RCN + C WVA + G  + N  +   E QH W PG
Sbjct: 66  SKSSWLHYRCNWKECFWVAKDDGIYIRNTPEGRDELQHQWEPG 107

[Close]

BLAST of Lsi05G010770 vs. TrEMBL
Match: A0A061DVJ1_THECC (S-protein, putative OS=Theobroma cacao GN=TCM_003118 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-19
Identity = 51/114 (44.74%), Postives = 68/114 (59.65%), Query Frame = 1


Query: 14  SWKVTILN-YQKDATLTVHCKSKDNDLGVHVLNFKGIYNWQFKENLLQTTLFWCNFNSTK 73
           +W +  +N    +  L +HCKS DNDLG+H L     +NW+FK  +L  TLFWC + +  
Sbjct: 42  TWHIHAVNGMSHEKILFLHCKSGDNDLGIHNLTAGTEFNWKFKPQILGKTLFWC-YMAWG 101

Query: 74  YGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPWTPG 127
             HASF+VFW +N   L  RCN +NCIW A + G  L NI +   EF+H W PG
Sbjct: 102 NVHASFKVFWDDND--LFYRCNWKNCIWTAKDDGVYLKNIPENYDEFRHKWEPG 152

[Close]

BLAST of Lsi05G010770 vs. TrEMBL
Match: M5VWE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-18
Identity = 49/113 (43.36%), Postives = 66/113 (58.41%), Query Frame = 1


Query: 13  SSWKVTILN-YQKDATLTVHCKSKDNDLGVHVLNFKGIYNWQFKENLLQTTLFWCNFNST 72
           + W V ++N      TL  HCKSKD+DLG   L     +NW FKEN   TTL+WC + ST
Sbjct: 17  NKWHVHVVNNLGAGKTLFAHCKSKDDDLGERNLAPGTEFNWSFKENFFGTTLYWC-YMST 76

Query: 73  KYGHASFEVFWPE-NGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPW 124
              HA+ +VFW E + +WL  RCN ++CIW+A + G  +  I +   EF H W
Sbjct: 77  DQKHAALDVFWVEGDHSWLQYRCNWKDCIWIAKDDGIYIKIIPENRDEFSHKW 128

[Close]

BLAST of Lsi05G010770 vs. TrEMBL
Match: V4TTV3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.0e-18
Identity = 49/115 (42.61%), Postives = 64/115 (55.65%), Query Frame = 1


Query: 10  VPGSSWKVTILN-YQKDATLTVHCKSKDNDLGVHVLNFKGIYNWQFKENLLQTTLFWCNF 69
           +P  +W V ++N    + TL VHCKSKD+DLG H L     + W+FKEN  QTTLFWC  
Sbjct: 30  IPTKTWHVHVVNNLSNNQTLLVHCKSKDDDLGEHNLAAGTEFAWKFKENFFQTTLFWCYL 89

Query: 70  NSTKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPW 124
                    F VFW E+  +   RC  +NCIW+A  +G  L NI + + E  H W
Sbjct: 90  KKQDKFCNIFNVFWKED--FFQFRCRYKNCIWIAKVEGIYLKNIPEGHDELWHEW 142

[Close]

BLAST of Lsi05G010770 vs. TAIR10
Match: AT4G16295.1 (AT4G16295.1 S-protein homologue 1)

HSP 1 Score: 92.4 bits (228), Expect = 2.1e-19
Identity = 45/115 (39.13%), Postives = 61/115 (53.04%), Query Frame = 1


Query: 13  SSWKVTILN-YQKDATLTVHCKSKDNDLGVHVLNFKGIYNWQFKENLLQTTLFWCNFNST 72
           S W+VT++N      TL +HCKSK++DLG   L F+  ++W F EN+L +T FWC  N  
Sbjct: 39  SEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKD 98

Query: 73  KYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPWTPG 127
             GH +  VFW +    L  RC  +NCIW A   G  L+N +         W  G
Sbjct: 99  N-GHMNVNVFWDD--VILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEVG 150

[Close]

BLAST of Lsi05G010770 vs. TAIR10
Match: AT4G29035.1 (AT4G29035.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 91.7 bits (226), Expect = 3.6e-19
Identity = 46/115 (40.00%), Postives = 63/115 (54.78%), Query Frame = 1


Query: 13  SSWKVTILN-YQKDATLTVHCKSKDNDLGVHVLNFKGIYNWQFKENLLQTTLFWCNFNST 72
           S W+VT+ N      TL +HCKSK+NDLG   L F   ++W F EN+L +TLFWC + S 
Sbjct: 39  SEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWC-YMSK 98

Query: 73  KYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPWTPG 127
             GH + +VFW +    L  RC+ +NC+W A   G  L+N +         W  G
Sbjct: 99  DDGHMNVKVFWDD--VILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWKSG 150

[Close]

BLAST of Lsi05G010770 vs. TAIR10
Match: AT5G06030.1 (AT5G06030.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 66.6 bits (161), Expect = 1.2e-11
Identity = 34/96 (35.42%), Postives = 51/96 (53.12%), Query Frame = 1


Query: 12  GSSWKVTILNYQKDATLTVHCKSKDNDLGVHVLNFKGIYNWQFKENLLQTTLFWCNFNST 71
           G   +VTI NY  D  L +HCKS+D+DLG H+L    ++ W+F  N   +TL +C F+  
Sbjct: 43  GHLTRVTIQNYN-DYLLAIHCKSRDDDLGFHILAKGELFGWKFHVNFRYSTLCFCGFSQR 102

Query: 72  KYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGF 108
           +     F ++      +   RC   NC W A++ GF
Sbjct: 103 QINKGVFIIYVASRDFY---RC--ANCTWKAEKDGF 132

[Close]

BLAST of Lsi05G010770 vs. TAIR10
Match: AT5G06020.1 (AT5G06020.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 63.9 bits (154), Expect = 8.0e-11
Identity = 36/104 (34.62%), Postives = 54/104 (51.92%), Query Frame = 1


Query: 10  VPGSSWKVTILNYQKDATLTVHCKSKDNDLGVHVLNFKGIYNWQFKENLLQTTLFWCNFN 69
           + G   ++T+ N   D  L +HCKSKD+DLG H+     +Y W+F  N   +TL++C F+
Sbjct: 42  IRGPLTRITVKN-NNDYLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFS 101

Query: 70  STKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNIS 114
             +     F++   E   +   RC  RNC W A  K  SL+  S
Sbjct: 102 QGQDNKGVFDIDRAERDFY---RC--RNCTWNA--KKDSLYGYS 137

[Close]

BLAST of Lsi05G010770 vs. TAIR10
Match: AT1G04645.1 (AT1G04645.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 63.5 bits (153), Expect = 1.0e-10
Identity = 30/77 (38.96%), Postives = 48/77 (62.34%), Query Frame = 1


Query: 17  VTILNYQKDATLTVHCKSKDNDLGVHVLNFKGIYNWQFKENLLQTTLFWCNFNSTKYGHA 76
           VT+ N      LT+HCKSK +DLG+HV+ FK  Y+++F+ NL ++TLF+C+F        
Sbjct: 31  VTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQ-FK 90

Query: 77  SFEVFWPENGTWLSDRC 94
           SF+++  +    + D C
Sbjct: 91  SFDIYDAQRDQGICDDC 106

[Close]

BLAST of Lsi05G010770 vs. NCBI nr
Match: gi|659117571|ref|XP_008458671.1| (PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo])

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-39
Identity = 76/116 (65.52%), Postives = 91/116 (78.45%), Query Frame = 1


Query: 9   QVPGSSWKVTILNYQKDATLTVHCKSKDNDLGVHVLNFKGI-YNWQFKENLLQTTLFWCN 68
           Q+P + W+VTI+NYQ +A+L VHCKSKD+DLGVHV+  +G  Y+W FKEN LQTT FWCN
Sbjct: 32  QLPLTDWQVTIINYQINASLEVHCKSKDDDLGVHVIQNEGERYSWGFKENWLQTTKFWCN 91

Query: 69  FNSTKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPW 124
           F S + GHASFEVFWPE GTWLSDRC++ NC+WVA   GFSL N   +  EFQHPW
Sbjct: 92  FQS-RLGHASFEVFWPETGTWLSDRCSNSNCVWVASNDGFSLLNGPAKTLEFQHPW 146

[Close]

BLAST of Lsi05G010770 vs. NCBI nr
Match: gi|778709234|ref|XP_011656368.1| (PREDICTED: uncharacterized protein LOC105435729 [Cucumis sativus])

HSP 1 Score: 162.5 bits (410), Expect = 4.7e-37
Identity = 74/117 (63.25%), Postives = 89/117 (76.07%), Query Frame = 1


Query: 9   QVPGSSWKVTILNYQKDATLTVHCKSKDNDLGVHVLNFKG-IYNWQFKENLLQTTLFWCN 68
           Q+P + W VTI+NYQ +A+L VHCKSKD+DLGVHV+  +G  Y+W FKEN LQTT +WC+
Sbjct: 32  QLPLTDWTVTIINYQINASLQVHCKSKDDDLGVHVIQNEGEHYSWGFKENWLQTTKYWCD 91

Query: 69  FNSTKYGHASFEVFWPENGTWLSDRC-NDRNCIWVADEKGFSLFNISQQNYEFQHPW 124
           F S K GHASFEVFWPE GTW SDRC ++ NC+WVA   GFSL N   +  EFQHPW
Sbjct: 92  FQS-KLGHASFEVFWPERGTWFSDRCGSNSNCVWVAAHDGFSLLNAPAKTLEFQHPW 147

[Close]

BLAST of Lsi05G010770 vs. NCBI nr
Match: gi|659125766|ref|XP_008462850.1| (PREDICTED: uncharacterized protein LOC103501130 [Cucumis melo])

HSP 1 Score: 143.3 bits (360), Expect = 3.0e-31
Identity = 61/112 (54.46%), Postives = 75/112 (66.96%), Query Frame = 1


Query: 12  GSSWKVTILNYQKDATLTVHCKSKDNDLGVHVLNFKGIYNWQFKENLLQTTLFWCNFNST 71
           GS W V+I N+QK+  L  HCKSKD+DLG  +++  G Y+W FKEN  QTTLFWC+F+S 
Sbjct: 36  GSKWVVSIHNFQKNDLLLAHCKSKDDDLGAQIIDINGQYSWTFKENFWQTTLFWCDFSSL 95

Query: 72  KYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPW 124
             GHASF+VFWPE G WL  RC+  NC W A   GF L NI +  +E  H W
Sbjct: 96  N-GHASFQVFWPEKGDWLEYRCDHGNCTWAATNDGFFLANIPEGRFELMHYW 146

[Close]

BLAST of Lsi05G010770 vs. NCBI nr
Match: gi|659093660|ref|XP_008447647.1| (PREDICTED: uncharacterized protein LOC103490054 [Cucumis melo])

HSP 1 Score: 132.5 bits (332), Expect = 5.2e-28
Identity = 56/109 (51.38%), Postives = 75/109 (68.81%), Query Frame = 1


Query: 17  VTILNYQKDATLTVHCKSKDNDLGVHVLNFKGIYNWQFKENLLQTTLFWCNFNSTKYGHA 76
           +TI+N+Q + TL VHCKSKD+DLG H+++    Y W+F+EN   TTLFWCNF + K+ HA
Sbjct: 3   ITIMNWQSNDTLLVHCKSKDDDLGEHIIDMGKEYEWKFRENFSGTTLFWCNFRN-KHKHA 62

Query: 77  SFEVFWPE--NGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPW 124
           +FEVFW E  + +WL D C D NC+W     GF L++ SQ  +EF H W
Sbjct: 63  TFEVFWRESRSKSWLEDHCKDSNCLWTVKSTGFYLYDSSQNKFEFIHEW 110

[Close]

BLAST of Lsi05G010770 vs. NCBI nr
Match: gi|449437310|ref|XP_004136435.1| (PREDICTED: uncharacterized protein LOC101208617 [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 8.9e-28
Identity = 60/118 (50.85%), Postives = 73/118 (61.86%), Query Frame = 1


Query: 9   QVPGSSWKVTILNYQKDATLTVHCKSKDNDLGVHVLNFKGIYNWQFKENLLQTTLFWCNF 68
           +VP SSWKV ILN     +L + CKSKD+DLG   L  K  ++W FKENL QTTL+WC  
Sbjct: 27  EVPLSSWKVNILNEMTKDSLFIRCKSKDDDLGAQNLGVKQQFSWSFKENLWQTTLYWCYM 86

Query: 69  NSTKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNISQQNYEFQHPWTPG 127
           ++ K  HASF V+WPE   WL+ RC  RNCIW A + G  L   +   YE  H W PG
Sbjct: 87  HNAK-SHASFNVYWPERSGWLAFRCQLRNCIWSARDDGIYLKTNTHNTYELIHTWEPG 143

The following BLAST results are available for this feature:

BLAST of Lsi05G010770 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G010770 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA40_CUCSA	3.3e-37	63.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G007430 PE=4 SV=1	[more]
M5VN50_PRUPE	6.2e-20	46.60	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024219mg PE=4 SV=1	[more]
A0A061DVJ1_THECC	1.1e-19	44.74	S-protein, putative OS=Theobroma cacao GN=TCM_003118 PE=4 SV=1	[more]
M5VWE5_PRUPE	1.5e-18	43.36	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022213mg PE=4 S...	[more]
V4TTV3_9ROSI	2.0e-18	42.61	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024159mg PE=4 SV=1	[more]

BLAST of Lsi05G010770 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16295.1	2.1e-19	39.13	S-protein homologue 1	[more]
AT4G29035.1	3.6e-19	40.00	Plant self-incompatibility protein S1 family	[more]
AT5G06030.1	1.2e-11	35.42	Plant self-incompatibility protein S1 family	[more]
AT5G06020.1	8.0e-11	34.62	Plant self-incompatibility protein S1 family	[more]
AT1G04645.1	1.0e-10	38.96	Plant self-incompatibility protein S1 family	[more]

BLAST of Lsi05G010770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117571\|ref\|XP_008458671.1\|	1.3e-39	65.52	PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo]	[more]
gi\|778709234\|ref\|XP_011656368.1\|	4.7e-37	63.25	PREDICTED: uncharacterized protein LOC105435729 [Cucumis sativus]	[more]
gi\|659125766\|ref\|XP_008462850.1\|	3.0e-31	54.46	PREDICTED: uncharacterized protein LOC103501130 [Cucumis melo]	[more]
gi\|659093660\|ref\|XP_008447647.1\|	5.2e-28	51.38	PREDICTED: uncharacterized protein LOC103490054 [Cucumis melo]	[more]
gi\|449437310\|ref\|XP_004136435.1\|	8.9e-28	50.85	PREDICTED: uncharacterized protein LOC101208617 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010264	Self-incomp_S1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G010770.1	Lsi05G010770.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 17..123 score: 3.4
None	No IPR available	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 7..125 score: 8.8
None	No IPR available	PANTHER	PTHR31232:SF2	GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MDJ14-RELATED	coord: 7..125 score: 8.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G010770	ClCG07G001660	Watermelon (Charleston Gray)	lsiwcgB348
Lsi05G010770	Cla97C07G129910	Watermelon (97103) v2	lsiwmbB346
Lsi05G010770	Bhi05G000085	Wax gourd	lsiwgoB459
Lsi05G010770	Cp4.1LG17g09890	Cucurbita pepo (Zucchini)	cpelsiB270
Lsi05G010770	CsGy3G025310	Cucumber (Gy14) v2	cgyblsiB185
Lsi05G010770	CsGy7G012530	Cucumber (Gy14) v2	cgyblsiB494

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G010770	Bottle gourd (USVL1VR-Ls)	lsilsiB106
Lsi05G010770	Bottle gourd (USVL1VR-Ls)	lsilsiB156
Lsi05G010770	Cucumber (Gy14) v1	cgylsiB082
Lsi05G010770	Cucumber (Gy14) v1	cgylsiB225
Lsi05G010770	Cucumber (Gy14) v1	cgylsiB417
Lsi05G010770	Cucurbita maxima (Rimu)	cmalsiB247
Lsi05G010770	Cucurbita maxima (Rimu)	cmalsiB486
Lsi05G010770	Cucurbita maxima (Rimu)	cmalsiB585
Lsi05G010770	Cucurbita maxima (Rimu)	cmalsiB769
Lsi05G010770	Cucurbita maxima (Rimu)	cmalsiB837
Lsi05G010770	Cucurbita moschata (Rifu)	cmolsiB235
Lsi05G010770	Cucurbita moschata (Rifu)	cmolsiB470
Lsi05G010770	Cucurbita moschata (Rifu)	cmolsiB565
Lsi05G010770	Cucurbita moschata (Rifu)	cmolsiB761
Lsi05G010770	Cucurbita moschata (Rifu)	cmolsiB821
Lsi05G010770	Cucurbita pepo (Zucchini)	cpelsiB209
Lsi05G010770	Cucurbita pepo (Zucchini)	cpelsiB616
Lsi05G010770	Cucurbita pepo (Zucchini)	cpelsiB716
Lsi05G010770	Wild cucumber (PI 183967)	cpilsiB199
Lsi05G010770	Wild cucumber (PI 183967)	cpilsiB213
Lsi05G010770	Cucumber (Chinese Long) v2	culsiB200
Lsi05G010770	Cucumber (Chinese Long) v2	culsiB215
Lsi05G010770	Cucumber (Chinese Long) v2	culsiB526
Lsi05G010770	Melon (DHL92) v3.5.1	lsimeB356
Lsi05G010770	Melon (DHL92) v3.5.1	lsimeB382
Lsi05G010770	Watermelon (Charleston Gray)	lsiwcgB317
Lsi05G010770	Watermelon (Charleston Gray)	lsiwcgB337
Lsi05G010770	Watermelon (97103) v1	lsiwmB357
Lsi05G010770	Watermelon (97103) v1	lsiwmB367
Lsi05G010770	Cucumber (Gy14) v2	cgyblsiB204
Lsi05G010770	Melon (DHL92) v3.6.1	lsimedB398
Lsi05G010770	Silver-seed gourd	carlsiB066
Lsi05G010770	Silver-seed gourd	carlsiB717
Lsi05G010770	Silver-seed gourd	carlsiB879
Lsi05G010770	Cucumber (Chinese Long) v3	cuclsiB219
Lsi05G010770	Cucumber (Chinese Long) v3	cuclsiB234
Lsi05G010770	Cucumber (Chinese Long) v3	cuclsiB560
Lsi05G010770	Watermelon (97103) v2	lsiwmbB335
Lsi05G010770	Watermelon (97103) v2	lsiwmbB355