Lsi05G009840 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAGTTCCTTTTTGGCAATTTCAAAAGCCATCCATCAGATTATTCCTATAAATATCCATACATTAACCCTTTGATATTTGCAATATTATCCAAACACTACCCTTCAACAGATCAATACATTGAAAGGCAAATTCCCATATAGCCATCAACTTCAACCAACAATAATGGCTGATTTTTGTCCTCCTGGTATGTTTCCATTTATGGTTTTAGTACAGCTTGTTCCTTTTTTTTTCTTCTTTTTTTTTTCTCTTTTATCGAGTTACGTCTTAAAATCAATGGTTAAATAAGGAGAGTTAAACTCATGTATTTTATAAAGTTTATGAGATCTCTCTAACATATATCCACTCAAAATGGTGATCGTTTTGTTGGGCTAAATCTTAAAATAAAGATTTGATCGAATGCATATATATTTTAGCTTCATCGAGTAATGCCATATTAGATACATGTGGGTCCAATCTCAAAGTCAAATATTAGAAATTTATGTATTTTAAAAAGTTTGTGAGGTCTTACTAACATGCACGGTTAAGATTATACTTTTTTGGATATGGTTTACTATTTTAAAGTGAGATCTCCAATTTTTTTTCGATTGAATACCCGTGTGGTTTTTATGGGCTCTAATATCATATTAAATAAATATAGAAGGACCACTAAAAACTAATTGGTAATAAGTGGACTAATAGCCTATGTATCTTATCAATTCGTGAGGTCTCCATCGTTTCAATGTGGGATCCTCAATATACCTTACTAAAACCTTCAATAGTGACATTGTAAGGTCATCTTATTAAATGTTATGTTTATGTCTTGAATCTGTTATCTCATACTCGGAATGACCAAGTCGGGGAGCCATATATAAACTCCCTACCTGCACATTATCTCTTTATTTTGTTCTCTGTTTTTTTTTCAATATAAAAAAAAATGTTTCTCTTTTTTGTCTATGGTTGTAGCTAACATCTCATTGGTGAAATCACGTAAATTCATGTGTCGATTTCTTTTTATTTTTATTTTTTGTTTTGTCCATTATTTCTTTCATAACATATAGTTTCAATTTGGTAGTGTGAGAATCAAGTTAATTGGTTATATGATGATGATTTGATTATTTGTGTTTTGTTTACTAGGAAAAAATGTGTGGCCCGAACTTGTTGGAATAAAAGCAACCATTGCAAAGCATATCATAAAGAAAGACAATTCCAATGTAGAACGTATTGAGACAGTCTTAGCTGGAAGTGGAGTGACTGAAGATCTTAGGTGTGATCGAGTTCGAATGTTTGTTAATATTGAGGGTACAATTGTTGAAACTCCAAGGATTGGTTAACTTCAAATAAACGTCCAAAAATGTATTAATGTTTTTATTTGTATTCATCACACAATGGTTTTCTAAAGTTTTATTGTAAGCAAAATAAAGGTAGAAGTATAACATATAGCTTGTATAATTCTACCACTTCAATAATGATCAATATTTTCCTTTGCATTTGTGTTT TTTAGTTCCTTTTTGGCAATTTCAAAAGCCATCCATCAGATTATTCCTATAAATATCCATACATTAACCCTTTGATATTTGCAATATTATCCAAACACTACCCTTCAACAGATCAATACATTGAAAGGCAAATTCCCATATAGCCATCAACTTCAACCAACAATAATGGCTGATTTTTGTCCTCCTGGAAAAAATGTGTGGCCCGAACTTGTTGGAATAAAAGCAACCATTGCAAAGCATATCATAAAGAAAGACAATTCCAATGTAGAACGTATTGAGACAGTCTTAGCTGGAAGTGGAGTGACTGAAGATCTTAGGTGTGATCGAGTTCGAATGTTTGTTAATATTGAGGGTACAATTGTTGAAACTCCAAGGATTGGTTAACTTCAAATAAACGTCCAAAAATGTATTAATGTTTTTATTTGTATTCATCACACAATGGTTTTCTAAAGTTTTATTGTAAGCAAAATAAAGGTAGAAGTATAACATATAGCTTGTATAATTCTACCACTTCAATAATGATCAATATTTTCCTTTGCATTTGTGTTT ATGGCTGATTTTTGTCCTCCTGGAAAAAATGTGTGGCCCGAACTTGTTGGAATAAAAGCAACCATTGCAAAGCATATCATAAAGAAAGACAATTCCAATGTAGAACGTATTGAGACAGTCTTAGCTGGAAGTGGAGTGACTGAAGATCTTAGGTGTGATCGAGTTCGAATGTTTGTTAATATTGAGGGTACAATTGTTGAAACTCCAAGGATTGGTTAA MADFCPPGKNVWPELVGIKATIAKHIIKKDNSNVERIETVLAGSGVTEDLRCDRVRMFVNIEGTIVETPRIG
BLAST of Lsi05G009840 vs. Swiss-Prot
Match: IER1_SOLLC (Ethylene-responsive proteinase inhibitor 1 OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 3.7e-15 Identity = 37/70 (52.86%), Postives = 50/70 (71.43%), Query Frame = 1
BLAST of Lsi05G009840 vs. Swiss-Prot
Match: ICI1_SOLPE (Wound-induced proteinase inhibitor 1 OS=Solanum peruvianum PE=3 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.4e-14 Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 1
BLAST of Lsi05G009840 vs. Swiss-Prot
Match: ITR1_NICSY (Trypsin inhibitor 1 OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 3.2e-14 Identity = 34/69 (49.28%), Postives = 49/69 (71.01%), Query Frame = 1
BLAST of Lsi05G009840 vs. Swiss-Prot
Match: IPIA_TOBAC (Proteinase inhibitor I-A OS=Nicotiana tabacum GN=TIMPB PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.6e-13 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 1
BLAST of Lsi05G009840 vs. Swiss-Prot
Match: IPIB_TOBAC (Proteinase inhibitor I-B OS=Nicotiana tabacum GN=TIMPA PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.6e-13 Identity = 33/64 (51.56%), Postives = 47/64 (73.44%), Query Frame = 1
BLAST of Lsi05G009840 vs. TrEMBL
Match: A0A0A0KME7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G286040 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 3.4e-23 Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = 1
BLAST of Lsi05G009840 vs. TrEMBL
Match: A0A0M3SAG8_9ROSI (Serine proteinase inhibitor OS=Cucumis metulifer PE=2 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.1e-21 Identity = 47/72 (65.28%), Postives = 61/72 (84.72%), Query Frame = 1
BLAST of Lsi05G009840 vs. TrEMBL
Match: A0A0A0KMM0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G285030 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 2.3e-19 Identity = 46/72 (63.89%), Postives = 56/72 (77.78%), Query Frame = 1
BLAST of Lsi05G009840 vs. TrEMBL
Match: M0ZTQ3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400003056 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 5.4e-13 Identity = 37/70 (52.86%), Postives = 50/70 (71.43%), Query Frame = 1
BLAST of Lsi05G009840 vs. TrEMBL
Match: K4D443_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 7.1e-13 Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 1
BLAST of Lsi05G009840 vs. TAIR10
Match: AT2G38870.1 (AT2G38870.1 Serine protease inhibitor, potato inhibitor I-type family protein) HSP 1 Score: 61.6 bits (148), Expect = 2.3e-10 Identity = 30/66 (45.45%), Postives = 40/66 (60.61%), Query Frame = 1
BLAST of Lsi05G009840 vs. TAIR10
Match: AT5G43580.1 (AT5G43580.1 Serine protease inhibitor, potato inhibitor I-type family protein) HSP 1 Score: 58.2 bits (139), Expect = 2.5e-09 Identity = 30/73 (41.10%), Postives = 45/73 (61.64%), Query Frame = 1
BLAST of Lsi05G009840 vs. TAIR10
Match: AT2G38900.2 (AT2G38900.2 Serine protease inhibitor, potato inhibitor I-type family protein) HSP 1 Score: 54.3 bits (129), Expect = 3.6e-08 Identity = 28/65 (43.08%), Postives = 39/65 (60.00%), Query Frame = 1
BLAST of Lsi05G009840 vs. NCBI nr
Match: gi|700195663|gb|KGN50840.1| (hypothetical protein Csa_5G286040 [Cucumis sativus]) HSP 1 Score: 115.2 bits (287), Expect = 4.9e-23 Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = 1
BLAST of Lsi05G009840 vs. NCBI nr
Match: gi|926474570|gb|ALD47589.1| (serine proteinase inhibitor [Cucumis metulifer]) HSP 1 Score: 110.2 bits (274), Expect = 1.6e-21 Identity = 47/72 (65.28%), Postives = 61/72 (84.72%), Query Frame = 1
BLAST of Lsi05G009840 vs. NCBI nr
Match: gi|700195661|gb|KGN50838.1| (hypothetical protein Csa_5G285030 [Cucumis sativus]) HSP 1 Score: 102.4 bits (254), Expect = 3.3e-19 Identity = 46/72 (63.89%), Postives = 56/72 (77.78%), Query Frame = 1
BLAST of Lsi05G009840 vs. NCBI nr
Match: gi|970043814|ref|XP_015083314.1| (PREDICTED: ethylene-responsive proteinase inhibitor 1 [Solanum pennellii]) HSP 1 Score: 81.6 bits (200), Expect = 6.0e-13 Identity = 37/70 (52.86%), Postives = 50/70 (71.43%), Query Frame = 1
BLAST of Lsi05G009840 vs. NCBI nr
Match: gi|350538787|ref|NP_001234615.1| (ethylene-responsive proteinase inhibitor 1 precursor [Solanum lycopersicum]) HSP 1 Score: 81.6 bits (200), Expect = 6.0e-13 Identity = 37/70 (52.86%), Postives = 50/70 (71.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |