Lsi05G009250 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGGTTCAAAATAGCAGCATTATTATTCTTGTGTGTTGTAGCTCTGATCCCCAAGATTGAAGCCCAAGGATGGGCTAACCCACCGCCGCTGTTGCCTCCACGCCCACTTTGTTCTTCACAATTTGCATTAGCAAGCTACGCATGTGCGAGGCTGCCTGTGAGCCCAGACCCCATCCCAATTCCTCCGCCTCCTTCAGAAGGCCACGACCACGACCACGGCCACGGCCACGGTCATCATCATCACCACGGGCGGCGCCACCACCACAGCCAGTCACCGGTGGCCGAGGAATGTTGCCGATGGGCCAGGCAGGTGGATAGTGAGTGCGTGTGTGAGGCGTTAGTTCATTTGGCTAACTTCTTGGTGCGACCATCGCATGCGTTTACCGTGGCCATTACGGACGAATGCGTTGTCACTTACTCATGCAACGGACGAATCAAGATTTGA ATGGGAAGGTTCAAAATAGCAGCATTATTATTCTTGTGTGTTGTAGCTCTGATCCCCAAGATTGAAGCCCAAGGATGGGCTAACCCACCGCCGCTGTTGCCTCCACGCCCACTTTGTTCTTCACAATTTGCATTAGCAAGCTACGCATGTGCGAGGCTGCCTGTGAGCCCAGACCCCATCCCAATTCCTCCGCCTCCTTCAGAAGGCCACGACCACGACCACGGCCACGGCCACGGTCATCATCATCACCACGGGCGGCGCCACCACCACAGCCAGTCACCGGTGGCCGAGGAATGTTGCCGATGGGCCAGGCAGGTGGATAGTGAGTGCGTGTGTGAGGCGTTAGTTCATTTGGCTAACTTCTTGGTGCGACCATCGCATGCGTTTACCGTGGCCATTACGGACGAATGCGTTGTCACTTACTCATGCAACGGACGAATCAAGATTTGA ATGGGAAGGTTCAAAATAGCAGCATTATTATTCTTGTGTGTTGTAGCTCTGATCCCCAAGATTGAAGCCCAAGGATGGGCTAACCCACCGCCGCTGTTGCCTCCACGCCCACTTTGTTCTTCACAATTTGCATTAGCAAGCTACGCATGTGCGAGGCTGCCTGTGAGCCCAGACCCCATCCCAATTCCTCCGCCTCCTTCAGAAGGCCACGACCACGACCACGGCCACGGCCACGGTCATCATCATCACCACGGGCGGCGCCACCACCACAGCCAGTCACCGGTGGCCGAGGAATGTTGCCGATGGGCCAGGCAGGTGGATAGTGAGTGCGTGTGTGAGGCGTTAGTTCATTTGGCTAACTTCTTGGTGCGACCATCGCATGCGTTTACCGTGGCCATTACGGACGAATGCGTTGTCACTTACTCATGCAACGGACGAATCAAGATTTGA MGRFKIAALLFLCVVALIPKIEAQGWANPPPLLPPRPLCSSQFALASYACARLPVSPDPIPIPPPPSEGHDHDHGHGHGHHHHHGRRHHHSQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECVVTYSCNGRIKI
BLAST of Lsi05G009250 vs. TrEMBL
Match: M5W0Q1_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021373mg PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 2.9e-32 Identity = 79/155 (50.97%), Postives = 99/155 (63.87%), Query Frame = 1
BLAST of Lsi05G009250 vs. TrEMBL
Match: A0A072UD15_MEDTR (Lipid transfer protein-like protein OS=Medicago truncatula GN=MTR_7g094650 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.7e-30 Identity = 80/168 (47.62%), Postives = 103/168 (61.31%), Query Frame = 1
BLAST of Lsi05G009250 vs. TrEMBL
Match: A5C5N5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032977 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 5.9e-30 Identity = 75/160 (46.88%), Postives = 97/160 (60.62%), Query Frame = 1
BLAST of Lsi05G009250 vs. TrEMBL
Match: V4VVN6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024447mg PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.3e-29 Identity = 75/155 (48.39%), Postives = 98/155 (63.23%), Query Frame = 1
BLAST of Lsi05G009250 vs. TrEMBL
Match: V7CW99_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G149300g PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 3.0e-29 Identity = 76/144 (52.78%), Postives = 92/144 (63.89%), Query Frame = 1
BLAST of Lsi05G009250 vs. TAIR10
Match: AT3G63095.1 (AT3G63095.1 Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 72.4 bits (176), Expect = 2.6e-13 Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = 1
BLAST of Lsi05G009250 vs. NCBI nr
Match: gi|1009147758|ref|XP_015891580.1| (PREDICTED: uncharacterized protein DDB_G0272724 [Ziziphus jujuba]) HSP 1 Score: 150.2 bits (378), Expect = 2.8e-33 Identity = 77/139 (55.40%), Postives = 97/139 (69.78%), Query Frame = 1
BLAST of Lsi05G009250 vs. NCBI nr
Match: gi|595790845|ref|XP_007199171.1| (hypothetical protein PRUPE_ppa021373mg, partial [Prunus persica]) HSP 1 Score: 146.4 bits (368), Expect = 4.1e-32 Identity = 79/155 (50.97%), Postives = 99/155 (63.87%), Query Frame = 1
BLAST of Lsi05G009250 vs. NCBI nr
Match: gi|657954833|ref|XP_008368867.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103432449 [Malus domestica]) HSP 1 Score: 142.9 bits (359), Expect = 4.5e-31 Identity = 81/170 (47.65%), Postives = 102/170 (60.00%), Query Frame = 1
BLAST of Lsi05G009250 vs. NCBI nr
Match: gi|502109473|ref|XP_004493654.1| (PREDICTED: lateral signaling target protein 2 homolog [Cicer arietinum]) HSP 1 Score: 142.5 bits (358), Expect = 5.9e-31 Identity = 76/150 (50.67%), Postives = 92/150 (61.33%), Query Frame = 1
BLAST of Lsi05G009250 vs. NCBI nr
Match: gi|694332213|ref|XP_009356752.1| (PREDICTED: transcription cofactor vestigial-like protein 3 [Pyrus x bretschneideri]) HSP 1 Score: 141.0 bits (354), Expect = 1.7e-30 Identity = 80/155 (51.61%), Postives = 98/155 (63.23%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |