Lsi05G008720 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G008720
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Cysteine-rich venom protein
Location	chr05 : 14801647 .. 14802120 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCCCCCATCTTTTGGTCAAGACTCGCCTCAAGACTATGTCGATGCACACAATGATGCTCGTGCTCGTGCCCGTGGTCAAGATAGCCCTGTCCAAGTTGCCATTGAACCCATCCAACCTATCCAATGGGATGAGGAAGTGGCAAACTATGCTAGGCAATATGCCAACGAACGCAGTAATGATTGCCAATTGTTGCATTCCAACAATAGGACTTATGGGGAGAATCTAGCAATGCATCCTACTGAAATGTCTGGCATCGAGGCAGTTGAAATGTGGGTGAATGAGCAACAATTCTACAATTATGACTCCAATACATGCGTTGATCAAGAAATGTGTGGTCACTACACTCAAGTTGTGTGGAATAATTCAACAAAAGTTGGATGTGCAAAAGTGAGGTGCAGCAATGGCGGTACATTCATTACCTGCAACTATTACCCACCAGGGAATGTTATTGGCGAGCGGCCGTATTAA

mRNA sequence

ATGCTTCCCCCATCTTTTGGTCAAGACTCGCCTCAAGACTATGTCGATGCACACAATGATGCTCGTGCTCGTGCCCGTGGTCAAGATAGCCCTGTCCAAGTTGCCATTGAACCCATCCAACCTATCCAATGGGATGAGGAAGTGGCAAACTATGCTAGGCAATATGCCAACGAACGCAGTAATGATTGCCAATTGTTGCATTCCAACAATAGGACTTATGGGGAGAATCTAGCAATGCATCCTACTGAAATGTCTGGCATCGAGGCAGTTGAAATGTGGGTGAATGAGCAACAATTCTACAATTATGACTCCAATACATGCGTTGATCAAGAAATGTGTGGTCACTACACTCAAGTTGTGTGGAATAATTCAACAAAAGTTGGATGTGCAAAAGTGAGGTGCAGCAATGGCGGTACATTCATTACCTGCAACTATTACCCACCAGGGAATGTTATTGGCGAGCGGCCGTATTAA

Coding sequence (CDS)

ATGCTTCCCCCATCTTTTGGTCAAGACTCGCCTCAAGACTATGTCGATGCACACAATGATGCTCGTGCTCGTGCCCGTGGTCAAGATAGCCCTGTCCAAGTTGCCATTGAACCCATCCAACCTATCCAATGGGATGAGGAAGTGGCAAACTATGCTAGGCAATATGCCAACGAACGCAGTAATGATTGCCAATTGTTGCATTCCAACAATAGGACTTATGGGGAGAATCTAGCAATGCATCCTACTGAAATGTCTGGCATCGAGGCAGTTGAAATGTGGGTGAATGAGCAACAATTCTACAATTATGACTCCAATACATGCGTTGATCAAGAAATGTGTGGTCACTACACTCAAGTTGTGTGGAATAATTCAACAAAAGTTGGATGTGCAAAAGTGAGGTGCAGCAATGGCGGTACATTCATTACCTGCAACTATTACCCACCAGGGAATGTTATTGGCGAGCGGCCGTATTAA

Protein sequence

MLPPSFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERSNDCQLLHSNNRTYGENLAMHPTEMSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVVWNNSTKVGCAKVRCSNGGTFITCNYYPPGNVIGERPY

Homology

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BLAST of Lsi05G008720 vs. Swiss-Prot
Match: PR1_SAMNI (Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 6.4e-44
Identity = 84/158 (53.16%), Postives = 107/158 (67.72%), Query Frame = 1


Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERS 60
           M+  S  Q+SPQDYVDAHN AR+               + P+ WDE VA +ARQYA  R+
Sbjct: 22  MVQYSVAQNSPQDYVDAHNAARSAVN------------VGPVTWDESVAAFARQYAQSRA 81

Query: 61  NDCQLLHSNNRTYGENLAMHPT-EMSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQV 120
            DC+L+HS +  YGENLA     E++G  AV+MWV E+  YN ++NTC   ++CGHYTQV
Sbjct: 82  GDCRLVHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQV 141

Query: 121 VWNNSTKVGCAKVRCSNGGTFITCNYYPPGNVIGERPY 158
           VW NS ++GCA+VRC+NG  FITCNY PPGN  G+RPY
Sbjct: 142 VWRNSVRIGCARVRCNNGAWFITCNYSPPGNYAGQRPY 167

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BLAST of Lsi05G008720 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.4e-43
Identity = 83/157 (52.87%), Postives = 107/157 (68.15%), Query Frame = 1


Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERS 60
           ++ P   QDS QDYV+AHN AR++              + P+QWDE +A YAR YAN+  
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIG------------VGPMQWDEGLAAYARNYANQLK 79

Query: 61  NDCQLLHSNNRTYGENLAMHPTEMSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVV 120
            DC+L+HS    YGENLA    ++SG+ AV +WVNE+  YNYD+NTC    +CGHYTQVV
Sbjct: 80  GDCRLVHSRG-PYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVV 139

Query: 121 WNNSTKVGCAKVRCSNGGTFITCNYYPPGNVIGERPY 158
           W NS ++GCAKVRC+NGGT I+CNY PPGN   ++PY
Sbjct: 140 WRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

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BLAST of Lsi05G008720 vs. Swiss-Prot
Match: PR1C_TOBAC (Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 7.8e-42
Identity = 79/151 (52.32%), Postives = 109/151 (72.19%), Query Frame = 1


Query: 8   QDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERSNDCQLLH 67
           Q+S QDY+DAHN ARA               ++P+ WD++VA YA+ YA++ + DC L+H
Sbjct: 31  QNSQQDYLDAHNTARADVG------------VEPLTWDDQVAAYAQNYASQLAADCNLVH 90

Query: 68  SNNRTYGENLAMHPTE-MSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVVWNNSTK 127
           S+ + YGENLA    + ++  +AVEMWVNE+Q+Y +DSNTC   ++CGHYTQVVW NS +
Sbjct: 91  SHGQ-YGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQVVWRNSVR 150

Query: 128 VGCAKVRCSNGGTFITCNYYPPGNVIGERPY 158
           VGCA+V+C+NGG  ++CNY PPGNVIG+ PY
Sbjct: 151 VGCARVQCNNGGYIVSCNYDPPGNVIGKSPY 168

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BLAST of Lsi05G008720 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-41
Identity = 79/154 (51.30%), Postives = 108/154 (70.13%), Query Frame = 1


Query: 5   SFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERSNDCQ 64
           S  Q+S QDY+DAHN ARA               ++P+ WD  VA YA+ Y ++ + DC 
Sbjct: 28  SHAQNSQQDYLDAHNTARADVG------------VEPLTWDNGVAAYAQNYVSQLAADCN 87

Query: 65  LLHSNNRTYGENLAMHPTE-MSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVVWNN 124
           L+HS+ + YGENLA    + M+  +AVEMWV+E+Q+Y++DSNTC   ++CGHYTQVVW N
Sbjct: 88  LVHSHGQ-YGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRN 147

Query: 125 STKVGCAKVRCSNGGTFITCNYYPPGNVIGERPY 158
           S +VGCA+V+C+NGG  ++CNY PPGNVIG+ PY
Sbjct: 148 SVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of Lsi05G008720 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.7e-41
Identity = 78/151 (51.66%), Postives = 108/151 (71.52%), Query Frame = 1


Query: 8   QDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERSNDCQLLH 67
           Q+S QDY+DAHN ARA               ++P+ WD++VA YA+ YA++ + DC L+H
Sbjct: 31  QNSQQDYLDAHNTARADVG------------VEPLTWDDQVAAYAQNYASQLAADCNLVH 90

Query: 68  SNNRTYGENLAMHPTE-MSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVVWNNSTK 127
           S+ + YGENLA    + M+  +AVEMWV+E+Q+Y++DSNTC   ++CGHYTQVVW NS +
Sbjct: 91  SHGQ-YGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVR 150

Query: 128 VGCAKVRCSNGGTFITCNYYPPGNVIGERPY 158
           VGCA+V+C+NGG  ++CNY PPGN  GE PY
Sbjct: 151 VGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

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BLAST of Lsi05G008720 vs. TrEMBL
Match: A0A0A0K6A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-48
Identity = 93/158 (58.86%), Postives = 116/158 (73.42%), Query Frame = 1


Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERS 60
           MLP S  QDSPQD++DAHN ARA+            + ++P+QWDE VA++A QYAN+R 
Sbjct: 20  MLPSSLAQDSPQDFLDAHNTARAQ------------DGVEPVQWDETVASFALQYANQRI 79

Query: 61  NDCQLLHSNNRTYGENLAMHPTEMSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVV 120
           NDC L+HS    YGEN+A    ++SG  AVEMWVNE++FY+Y SNTC    +CGHYTQVV
Sbjct: 80  NDCSLVHSGG-PYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVV 139

Query: 121 WNNSTKVGCAKVRC-SNGGTFITCNYYPPGNVIGERPY 158
           W NS ++GCAKV C +NGGTFITCNY PPGN +G+RPY
Sbjct: 140 WRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of Lsi05G008720 vs. TrEMBL
Match: A0A0A0K2V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.9e-47
Identity = 90/158 (56.96%), Postives = 117/158 (74.05%), Query Frame = 1


Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERS 60
           MLP S  QDSPQDYV++HN ARA               + PI+WDE+VANY+R YAN+R 
Sbjct: 19  MLPSSLAQDSPQDYVNSHNHARAAVG------------VGPIKWDEKVANYSRYYANKRM 78

Query: 61  NDCQLLHSNNRTYGENLAMHPTEMSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVV 120
           NDC+L+HSN   YGEN+A    ++SGI AV++WV+E+Q+YNY+SN+C   ++CGHYTQVV
Sbjct: 79  NDCRLVHSNG-PYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGHYTQVV 138

Query: 121 WNNSTKVGCAKVRCSN-GGTFITCNYYPPGNVIGERPY 158
           W NS ++GCAKV+C N GG FI CNY P GN++G+RPY
Sbjct: 139 WKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of Lsi05G008720 vs. TrEMBL
Match: M5VJ82_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa1027191mg PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-45
Identity = 87/157 (55.41%), Postives = 109/157 (69.43%), Query Frame = 1


Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERS 60
           +L  +  QD+PQDYV AHN+ARA               + P+ WDE++  YA+ YAN+  
Sbjct: 18  LLQSTHAQDTPQDYVTAHNNARAAVN------------VGPLSWDEKLQGYAQDYANQHI 77

Query: 61  NDCQLLHSNNRTYGENLAMHPTEMSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVV 120
            DC L+HS    YGENLAM   ++SG +AV MWV E+  YNYDSNTC D +MCGHYTQVV
Sbjct: 78  GDCNLVHSGG-PYGENLAMSTADLSGTDAVNMWVAEKADYNYDSNTCADGKMCGHYTQVV 137

Query: 121 WNNSTKVGCAKVRCSNGGTFITCNYYPPGNVIGERPY 158
           W N+ +VGCAKVRC++GGTFI CNY PPGN +GE+PY
Sbjct: 138 WRNTARVGCAKVRCNSGGTFIGCNYDPPGNYVGEKPY 161

[Close]

BLAST of Lsi05G008720 vs. TrEMBL
Match: B2CZ52_CUCME (Pathogen-related protein 1 OS=Cucumis melo var. inodorus GN=Cuc m 3 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-45
Identity = 89/157 (56.69%), Postives = 112/157 (71.34%), Query Frame = 1


Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERS 60
           MLP SF QDS +D+VDAHN ARA+              + P+ W++ VA+YA QYAN+R 
Sbjct: 1   MLPFSFAQDSIKDFVDAHNAARAQVG------------VGPVHWNKTVADYAHQYANKRI 60

Query: 61  NDCQLLHSNNRTYGENLAMHPTEMSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVV 120
            DC L+HS    YGEN+A     ++G  AV MWV+E+QFYNYD+N+CV  +MCGHYTQVV
Sbjct: 61  KDCNLVHSKG-PYGENIAWGSRNLAGTVAVRMWVSEKQFYNYDTNSCVRGKMCGHYTQVV 120

Query: 121 WNNSTKVGCAKVRCSNGGTFITCNYYPPGNVIGERPY 158
           W NS ++GCAKVRC +GGTFITCNY P GN+ G+RPY
Sbjct: 121 WRNSVRIGCAKVRCKSGGTFITCNYDPRGNIRGQRPY 144

[Close]

BLAST of Lsi05G008720 vs. TrEMBL
Match: A0A067KN00_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06954 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.4e-45
Identity = 86/157 (54.78%), Postives = 111/157 (70.70%), Query Frame = 1


Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERS 60
           ++ P   QD  QDY+DAHN AR                + P+ WD+ VA YA+ YAN+R+
Sbjct: 20  LILPIQSQDQQQDYLDAHNQARTAVG------------VGPLSWDDTVAAYAQNYANQRA 79

Query: 61  NDCQLLHSNNRTYGENLAMHPTEMSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVV 120
            DC L+HS    YGENLA    E+SG +AV+MWV+E+ +Y+YDSN+C   +MCGHYTQVV
Sbjct: 80  GDCNLVHSGG-PYGENLAWSSAELSGTDAVKMWVDEKAYYDYDSNSCSPGQMCGHYTQVV 139

Query: 121 WNNSTKVGCAKVRCSNGGTFITCNYYPPGNVIGERPY 158
           W++S +VGCAKVRCSNGGTFITCNY PPGN +G++PY
Sbjct: 140 WSSSVRVGCAKVRCSNGGTFITCNYDPPGNYVGQKPY 163

[Close]

BLAST of Lsi05G008720 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 179.9 bits (455), Expect = 1.2e-45
Identity = 84/150 (56.00%), Postives = 105/150 (70.00%), Query Frame = 1


Query: 8   QDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERSNDCQLLH 67
           QDSPQD++  HN ARA               + P++WDE+VA YAR YAN+R  DC + H
Sbjct: 27  QDSPQDFLAVHNRARAEVG------------VGPLRWDEKVAAYARNYANQRKGDCAMKH 86

Query: 68  SNNRTYGENLAMHPTEMSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVVWNNSTKV 127
           S+  +YGEN+A     M+G+ AV+MWV+EQ  Y+YDSNTC   + CGHYTQVVW NS ++
Sbjct: 87  SSG-SYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERL 146

Query: 128 GCAKVRCSNGGTFITCNYYPPGNVIGERPY 158
           GCAKVRC+NG TFITCNY PPGN +GE PY
Sbjct: 147 GCAKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Lsi05G008720 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 175.3 bits (443), Expect = 3.1e-44
Identity = 83/157 (52.87%), Postives = 107/157 (68.15%), Query Frame = 1


Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERS 60
           ++ P   QDS QDYV+AHN AR++              + P+QWDE +A YAR YAN+  
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIG------------VGPMQWDEGLAAYARNYANQLK 79

Query: 61  NDCQLLHSNNRTYGENLAMHPTEMSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVV 120
            DC+L+HS    YGENLA    ++SG+ AV +WVNE+  YNYD+NTC    +CGHYTQVV
Sbjct: 80  GDCRLVHSRG-PYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVV 139

Query: 121 WNNSTKVGCAKVRCSNGGTFITCNYYPPGNVIGERPY 158
           W NS ++GCAKVRC+NGGT I+CNY PPGN   ++PY
Sbjct: 140 WRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Lsi05G008720 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 173.7 bits (439), Expect = 8.9e-44
Identity = 82/155 (52.90%), Postives = 106/155 (68.39%), Query Frame = 1


Query: 5   SFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERSNDCQ 64
           S  +D  Q +++AHN+AR                + P+ WD+EVA YA  YAN+R NDC 
Sbjct: 20  SLAEDLQQQFLEAHNEARNEVG------------LDPLVWDDEVAAYAASYANQRINDCA 79

Query: 65  LLHSNNRTYGENLAMHPTEMSGIEAVEMWVNEQQFYNYDSNTCVDQE--MCGHYTQVVWN 124
           L+HSN   +GEN+AM   EMS  +A EMW+NE+Q+Y+YDSNTC D     C HYTQVVW 
Sbjct: 80  LVHSNG-PFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWK 139

Query: 125 NSTKVGCAKVRCSNGGTFITCNYYPPGNVIGERPY 158
           N+ ++GCAKV C++GGTFITCNY PPGN IGE+P+
Sbjct: 140 NTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of Lsi05G008720 vs. TAIR10
Match: AT5G26130.1 (AT5G26130.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 169.1 bits (427), Expect = 2.2e-42
Identity = 82/155 (52.90%), Postives = 95/155 (61.29%), Query Frame = 1


Query: 4   PSFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERSNDC 63
           P   QD PQDY+D HN AR +              + P++W      YA  YA +R  DC
Sbjct: 24  PLKAQDQPQDYLDEHNRARTQVG------------VPPMKWHAGAEQYAWNYAQQRKGDC 83

Query: 64  QLLHSN-NRTYGENLAMHPTEMSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVVWN 123
            L HSN N  YGENLA     +SG EAV++WVNE+  Y Y SNTC D + CGHYTQVVW 
Sbjct: 84  SLTHSNSNGLYGENLAWSGGALSGAEAVKLWVNEKSDYIYASNTCSDGKQCGHYTQVVWR 143

Query: 124 NSTKVGCAKVRCSNGGTFITCNYYPPGNVIGERPY 158
            S  VGCAKV+C NGGTF+TCNYYPPGN  G  PY
Sbjct: 144 TSEWVGCAKVKCDNGGTFVTCNYYPPGNYRGRWPY 166

[Close]

BLAST of Lsi05G008720 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 166.4 bits (420), Expect = 1.4e-41
Identity = 80/154 (51.95%), Postives = 100/154 (64.94%), Query Frame = 1


Query: 4   PSFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERSNDC 63
           PS  QDSPQDY+  HN AR                + P+QWDE VA YAR YA +   +C
Sbjct: 23  PSKAQDSPQDYLRVHNQARGAVG------------VGPMQWDERVAAYARSYAEQLRGNC 82

Query: 64  QLLHSNNRTYGENLAMHPTEMSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVVWNN 123
           +L+HS    YGENLA    ++SG+ AV MWV+E+  YNY +NTC    +CGHYTQVVW  
Sbjct: 83  RLIHSGG-PYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRK 142

Query: 124 STKVGCAKVRCSNGGTFITCNYYPPGNVIGERPY 158
           S ++GCAKVRC+NGGT I+CNY P GN + E+PY
Sbjct: 143 SVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Lsi05G008720 vs. NCBI nr
Match: gi|778724783|ref|XP_011658861.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 1.9e-48
Identity = 93/158 (58.86%), Postives = 116/158 (73.42%), Query Frame = 1


Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERS 60
           MLP S  QDSPQD++DAHN ARA+            + ++P+QWDE VA++A QYAN+R 
Sbjct: 20  MLPSSLAQDSPQDFLDAHNTARAQ------------DGVEPVQWDETVASFALQYANQRI 79

Query: 61  NDCQLLHSNNRTYGENLAMHPTEMSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVV 120
           NDC L+HS    YGEN+A    ++SG  AVEMWVNE++FY+Y SNTC    +CGHYTQVV
Sbjct: 80  NDCSLVHSGG-PYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVV 139

Query: 121 WNNSTKVGCAKVRC-SNGGTFITCNYYPPGNVIGERPY 158
           W NS ++GCAKV C +NGGTFITCNY PPGN +G+RPY
Sbjct: 140 WRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of Lsi05G008720 vs. NCBI nr
Match: gi|778724786|ref|XP_004136929.2| (PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 2.8e-47
Identity = 90/158 (56.96%), Postives = 117/158 (74.05%), Query Frame = 1


Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERS 60
           MLP S  QDSPQDYV++HN ARA               + PI+WDE+VANY+R YAN+R 
Sbjct: 19  MLPSSLAQDSPQDYVNSHNHARAAVG------------VGPIKWDEKVANYSRYYANKRM 78

Query: 61  NDCQLLHSNNRTYGENLAMHPTEMSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVV 120
           NDC+L+HSN   YGEN+A    ++SGI AV++WV+E+Q+YNY+SN+C   ++CGHYTQVV
Sbjct: 79  NDCRLVHSNG-PYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGHYTQVV 138

Query: 121 WNNSTKVGCAKVRCSN-GGTFITCNYYPPGNVIGERPY 158
           W NS ++GCAKV+C N GG FI CNY P GN++G+RPY
Sbjct: 139 WKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

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BLAST of Lsi05G008720 vs. NCBI nr
Match: gi|659110127|ref|XP_008455062.1| (PREDICTED: pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 195.7 bits (496), Expect = 6.2e-47
Identity = 89/158 (56.33%), Postives = 117/158 (74.05%), Query Frame = 1


Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERS 60
           MLP S  QDSPQDY++ HN ARA  R            ++ IQWDE+VANY+RQYAN R 
Sbjct: 19  MLPSSLAQDSPQDYLNGHNQARAAVR------------VRLIQWDEKVANYSRQYANLRM 78

Query: 61  NDCQLLHSNNRTYGENLAMHPTEMSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVV 120
           NDC+L+HSN   YGEN+A    ++SG +AV++WVNE+Q+Y+Y++N+C   ++CGHYTQVV
Sbjct: 79  NDCRLVHSNG-PYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGHYTQVV 138

Query: 121 WNNSTKVGCAKVRCSN-GGTFITCNYYPPGNVIGERPY 158
           W NS ++GCAKV+C N GG FI CNY P GN++G+RPY
Sbjct: 139 WKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 163

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BLAST of Lsi05G008720 vs. NCBI nr
Match: gi|659110129|ref|XP_008455064.1| (PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo])

HSP 1 Score: 195.3 bits (495), Expect = 8.1e-47
Identity = 91/158 (57.59%), Postives = 115/158 (72.78%), Query Frame = 1


Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERS 60
           MLP S  QDSP+D+V+AHN ARA+              + P+ WDE VA++ARQYAN+R 
Sbjct: 20  MLPSSLAQDSPRDFVNAHNAARAQVG------------VGPVHWDERVASFARQYANQRI 79

Query: 61  NDCQLLHSNNRTYGENLAMHPTEMSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVV 120
           NDC+L+HS    YGEN+A    ++SG  AV+MWVNE+QFYNY SNTC   ++CGHYTQVV
Sbjct: 80  NDCRLVHSGG-PYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVV 139

Query: 121 WNNSTKVGCAKVRCSNG-GTFITCNYYPPGNVIGERPY 158
           W NS ++GCAKVRC+N  GTFI CNY P GN+IG++PY
Sbjct: 140 WRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of Lsi05G008720 vs. NCBI nr
Match: gi|727416925|ref|XP_010517582.1| (PREDICTED: pathogenesis-related protein 1-like [Camelina sativa])

HSP 1 Score: 193.0 bits (489), Expect = 4.0e-46
Identity = 91/157 (57.96%), Postives = 112/157 (71.34%), Query Frame = 1


Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPVQVAIEPIQPIQWDEEVANYARQYANERS 60
           ++ PS  QDSPQDYV+AHN AR++              + PIQWDEEVA YAR YA++  
Sbjct: 20  LVVPSKAQDSPQDYVNAHNQARSQVG------------VGPIQWDEEVAGYARSYADQLK 79

Query: 61  NDCQLLHSNNRTYGENLAMHPTEMSGIEAVEMWVNEQQFYNYDSNTCVDQEMCGHYTQVV 120
            DC L+HS  R YGENLAM   + SG++AV +WVNE+  YNYDSNTC    +CGHYTQVV
Sbjct: 80  GDCNLVHSGGR-YGENLAMSTGDFSGVDAVNLWVNEKADYNYDSNTC--NGVCGHYTQVV 139

Query: 121 WNNSTKVGCAKVRCSNGGTFITCNYYPPGNVIGERPY 158
           W NS ++GCAKVRC+NGGT ++CNY PPGN  GE+PY
Sbjct: 140 WRNSVRLGCAKVRCNNGGTVVSCNYDPPGNFNGEKPY 161

The following BLAST results are available for this feature:

BLAST of Lsi05G008720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PR1_SAMNI	6.4e-44	53.16	Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1	[more]
PRB1_ARATH	5.4e-43	52.87	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1	[more]
PR1C_TOBAC	7.8e-42	52.32	Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3	[more]
PR1B_TOBAC	2.3e-41	51.30	Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1	[more]
PR1A_TOBAC	8.7e-41	51.66	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]

BLAST of Lsi05G008720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6A4_CUCSA	1.3e-48	58.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1	[more]
A0A0A0K2V9_CUCSA	1.9e-47	56.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1	[more]
M5VJ82_PRUPE	1.1e-45	55.41	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa1027191mg PE=3 SV=1	[more]
B2CZ52_CUCME	1.4e-45	56.69	Pathogen-related protein 1 OS=Cucumis melo var. inodorus GN=Cuc m 3 PE=2 SV=1	[more]
A0A067KN00_JATCU	2.4e-45	54.78	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06954 PE=3 SV=1	[more]

BLAST of Lsi05G008720 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33720.1	1.2e-45	56.00	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14580.1	3.1e-44	52.87	basic pathogenesis-related protein 1	[more]
AT3G19690.1	8.9e-44	52.90	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT5G26130.1	2.2e-42	52.90	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14610.1	1.4e-41	51.95	pathogenesis-related gene 1	[more]

BLAST of Lsi05G008720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778724783\|ref\|XP_011658861.1\|	1.9e-48	58.86	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|778724786\|ref\|XP_004136929.2\|	2.8e-47	56.96	PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|659110127\|ref\|XP_008455062.1\|	6.2e-47	56.33	PREDICTED: pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|659110129\|ref\|XP_008455064.1\|	8.1e-47	57.59	PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo]	[more]
gi\|727416925\|ref\|XP_010517582.1\|	4.0e-46	57.96	PREDICTED: pathogenesis-related protein 1-like [Camelina sativa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

Vocabulary: **INTERPRO**
Term	Definition
IPR018244	Allrgn_V5/Tpx1_CS
IPR014044	CAP_domain
IPR001283	Allrgn_V5/Tpx1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G008720.1	Lsi05G008720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 89..102 score: 9.0E-20coord: 140..153 score: 9.0E-20coord: 113..129 score: 9.0E-20coord: 42..60 score: 9.0
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..157 score: 9.8
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 5..157 score: 2.0
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 15..145 score: 1.5
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 9..153 score: 9.7
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 8..157 score: 1.83
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 114..124 scor
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 140..151 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 1..157 score: 9.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G008720	Cp4.1LG15g03240	Cucurbita pepo (Zucchini)	cpelsiB216

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G008720	Silver-seed gourd	carlsiB651
Lsi05G008720	Watermelon (97103) v2	lsiwmbB354
Lsi05G008720	Wax gourd	lsiwgoB461
Lsi05G008720	Cucurbita maxima (Rimu)	cmalsiB581
Lsi05G008720	Cucurbita moschata (Rifu)	cmolsiB476
Lsi05G008720	Cucurbita moschata (Rifu)	cmolsiB558
Lsi05G008720	Cucurbita pepo (Zucchini)	cpelsiB623
Lsi05G008720	Watermelon (Charleston Gray)	lsiwcgB316
Lsi05G008720	Watermelon (97103) v1	lsiwmB343