Lsi05G008650 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G008650
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionProbable multidrug resistance ABC transporter ATP-binding/permease protein YheI
Locationchr05 : 14560600 .. 14568444 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAGAACCACCCAAATCTCCCATCCAAAAGTCCTTATAAAAGATCTCCCAACTTTTCTTCCATAAACTTTCTATTACAATCTTTTCAAATCATTCGAAGACAAGCATAGGAGAAAGATAGAAGCAACCAAGAGGTAAGTAGCTTGTCTCGCCTCTCTTTGAGTGGTTTATGGTAGTTGCCTTTGTTATGTTGCATAATTATGTTATTATTTATATGTTGCATTACATGATCAAAATATGTTTCTTTATAAGGGACCCCATGTATTATGTATGTTCATGATTATGTTAAGATCAAGTTTTATTTGGGTATAGGTTATGCTTCCAGGGCTAGCAGGGTATGTATGGTTGCACCCCTCTAGACCCAATCTTACGTTATGTTCATGTTAGGGGCTAGTAGGGTATGTATGGTTGCACCCCTCTAGTCCAATCTTACGTTTACGTTAATGGTTGATGTTGGATGCGACTCTAACTCTACTGACTGCATGACCCGCTAATCATCAGATGAGTTAGTTTCGCTTAAGTCCACATCTTCCTATCAGGGCGGAGGAACTCATGTTGGAAGCATAACCGACTACCTCACCTTATGACAAATCCAAGTTTGGGTCCCAATCATATGTTTTTTTAATTTTTCATAACACGTTGCATGTGATTGTGCATATGGGCACTACCATAGGTAGGGTATATTATATACTCATCCTATTCCATAGACTTTGTAGGTAATGACACAGCATAGAGGCATGACGGGACACCACTCAGAAGGCCAACCATCAAATTCACTGTTTTGGTCACATATGCATTTTGTTCCACTACGCTGATGTTTTGTTTTTATGGATCCTGGGATTATGTAAAAAGAAGTTTTTGTAAAGTTTTTACTTAACTAACAAAAGTTTTGATTTTTACTCTAAAATATTTTGACCAAAACCCAACTCATGATAGGAAAGTTTAGGTATGCATGTCGTAGCGGTCGGACCATGTTATGTAAGGGTCAGGTCGCTACACTTTGTCTCATCCTGGTTGGTGTGTCGCAATGGTGGAGGAGATGATTGCCTTAGATAACAATGGTATTTAGGATTTAGTTTCTCTCTCTGCAAGTAAGAAGACTATTGATTGCAAATGGGTATTTGCGGTTAAAGTCAATCCTGATGGTTATGTTGCTCGGTTAAAAGGACGCCTTGTAGCAAAAGGCTATGCACAAACTTATAGCACTGACTATGCTAATACTTTTTCTCCAGTCGCAAAAATGGCATCTGTGAAGTTGTTTATTTCATTAGCTTCAATCAATCATGACCTTTACATCAGCTTGATATTAAAAATGCATTTCTTCATGTTGATCTTCAAGAAGAGGTGGATATGGAGCAACCACCAAGGTTTGTTGCTCAGGGGGAGAATGGAAAGGTGTGTTGCCTTCGTAAATCTTTGTATTTATTAAAGTAGAGTCCACCGGCTTGGTTTGGCAAATTTAGTCAGGCAATTGAGAGCTTTGGAATGCGGAAGAGCACGTCAGCTCATTCAGTCTTTTGTAAGAGATATGAAAGTGGTGCATCCTGTTAGTCATATATGTTGATGATATTGTGATTACTGGTGATGGTGCTTTAGGTATCCAGTCCCTAAAGACCCTTCTCCATAGTCAATTCCATACAAAAGATTTGGGTATGTTGACATACTTCTTAGGAATTGAGGTAATAAGAAGCAAGAAATGAATACTATTATCACAGAGAAAATATGTACTTGACGTTGACTGAAACAAGGAAGCTAGGGGCTAAGTCATGTAGTACCCCAATGATGTCAACTTATAGCTCACAAAAGATGGAGAATTGCTAAAAGATCCTGAAAGATATATGAGGTTAGTGGGAAAACATAATTATCTTACAATTACTCGACTCGACATAGCCTATTCAGTGAGTATTGTGAGTCAATATATGTCATGTCCTACAGTTGATCATCAGGCTGCACTGGAATAGATTCTGTGTTATCTAAAGGCGGCTCCTGGGCGTGGTTTATTATATAAAGATTATGGCCATACTAATATTGAATATTTCTCATACATCAATTGGGCAAGATCTAAAGAAGATAGAAGATCAACTTCAAGATATTGTGCTTTTGTTAGTGGTAATTTCATTTATTGGAAGAGTAAGAAGCAAAATGTGGTGTCGCATTGAAGTGCGGAATCATAATATAAAGCTGGCATAGTCTGTGTGTGAATTGATTTGAATATATCAACTTCGTGTTGAGTTGGGATTTGAAATCACAACACCGATAAAATTATGGTGTGATAATCAAGCAGCACTTTATATTGCGTCTAATCTAGTATTCCATGAGATGACTAAACATATTTAAGTTGATTTCCATTTGTACGTGAGAAAATTCAATAAAGTTTGATATCTACAAGATATGTCAAGACCGGAGAACAATTAGGAGATATCTTCATGAAAACATTGAATAGAACACGTATAGATTATTTATGTAACAAGTTGGTCATGATTAACATATATGCTCCAGCTTGAGGGGGAGTGTTATAGTTTTAATATTAGGAATATTTTATTATTGTACATATATTTGTTATATTTTCCTTTTGTGGCCATTTCCACGCTTTTATTCTTTGATCACTCTTGTACACTTGTATATATATATTTCCTTAGTGAATGAAATAAAGTATTATGATTCTCTCAAACCTAAAAATTTTACAATTATTTTTCTTAAGCAGGATAAGAGGCCTACATTGTCAAACATTAATTTGGAGATACCAGTGGGTAGCTTAGTGGCAATTGTTGGAAGTACAGGGGAAGGGAAGACATCATTACTATCAGCCATGCTTAGAGAACTTCCACCACTTGGGGATTCAATTGTTTCTATTCAAGGAACTATTGCTTATGTTCCACAACTTTCTTGGATTTTTAATGCAACAGTAAGTTGGAATAACTTTCAACAAAATAATGATCGTATAAAATTAGTTCACTATTTTAATTTAAATGCATATTTTGTTATTTTTTATTTTTAGGTGCGCGATAATATTTTATTTGGTACTACCTTTGATTCGGCCAAATATGAGAAGACAATCGATATAACTGCATTGCAGCATGACCTTGACTTACTACCAGTAAGTTTTCCATTTTCTTTCAATAGCTATATATATGTGTTATCACTAGACATGAAGTTAAAGACAATTAATTATTTTATTTGGTTATTTAATTTTGTTTATTGTTAGGGTGGTGATCTTACTGAAATTGGAGAAAGAGGAGTGAATATTAGTGGTGGCCAAAAACAAAGAGTTTCATTGGCCAGGGCTGTCTATTCCAATTCTGATGTTTACATTTTTGATGATCCTTTAAGTGCTCTTGATGCTTATGTGGCTACTGAGGTATCTTCTACTTTCCTTTATTGAAATTTTGGTTATCTAACAAACAACATAAGTTTTTACACAAGATATTATAACATTTCCAAAAACATCATAAATAAACGCAGAAAACTAAAGAACTAGAACAGAACATAGAGTTTACTAACCCAGTTCAGTGAAATACCACCTATGTCTAAAGGGTCAATATGGTCGTGGAAAGATATTTTTACTAATATAAAGTCAAGCAAGTACAACGATGTACTTATCTATAAATAAACGCCAATTACAGTGACACTCAAATAGCCTAACTTAGGGAACGGTCACTTAGGCTCCCTTTAAGTGTGAGATCTCCTCACTTTCAATGTACTTAGACTCCCCCTAAGTATAACACACAAGACACAAGACTCGATAAATCTTCAAAACGGCCAACCTTAAAATTCAACAAACCACAAAAATATATATATATATATATATATATATATATATATATATATATATATATGGGTAGCTTTGAAAAGATCTTCAAGGAAAGAATAAATCAACTTTGTAGGTAAAAAGGCAGCAGACTCCAAAATCTGCATAATCCCGCAATAGATAGGGGAAGAAAATATTCAACAAATTTTTCTATCTATCACTTAACAATGTCATAAACAATGTGACAACAAGTTGTGAGACATGTTGTTCAAGTTTTGCTTGTAATAAATGAGCCAAACATATTGTAATAACAAACTCCTTAATAATTTCCCTCTTTGGCTATATTTTGAGGCAAAATAAACTATACAACAAAGCACGACAGTAGAAGAAAACCAAACTAAACTAGAACAATCATCACAACCACAAACCATCTAACATATAAACCAAACCATATTAGAACTACCACATACCATAGGAAACGGTAGAGCTATCATGCTAAACCAAACCCATTCTCCCCCTTTTGTTTGACTTACAAAACAACCTAAGACAACATAACAATAGATATCAGAAGAGAAAAAATAAGCAACACACCCAAGAAATTAGAAGCAAGCAAGAAACCAACAACAGATAAAAACAATCAGAATGCCCTGAATCCCCTGACCCATCAATAAAAACAACAATTAAGTCATTAGATTACATATCATCTACAAGACTAGAGCCTTCAGCATTTGGTCCTGACTTAGATACACCATCTCAATTAACAAATAACCTCAATAAAAATAACATGACATTCACTTAAATTATGCGATCAATACTATGTCAAATGAGAACACTCAATGCTCGTGATTGATAGGCAAGAACATGCATGATGAAGTTCCAACATGAGGAGAAATATGTAGAGATCCCCCCGTGACATTCATATCATCAGTAGGTAATACCGTCATCACCCAGAGCTGGAATGTCATGGCTGATGTCAGACACATGAAGTCGCTGAAACAGTTGGACATTGACATGTTTAACACTGTGATCAATCAAAACTAGTTGTCCATTATCGAGACAATCTTGAGCTTGTTTAGGAAGATCTTTTTCACTAGAGATTCGCCTCTTGACCACATATTTCCACAAATTAACACTCTTCTCAGAGTGAAGAGTACCATCTAGGGCACAACAAGAACAATAGGAGGACTTTTATTCATTACAGTTCTAGAAGACTGATTATCACCAGCCTGACGAGGACTATTTTCCTCAGAGTTTAAGTCATTGACCATGTCTTTGGCAGAAACAAATGTATTACTTTTAAAGACAATAAAACTTTCTCAAATGGATGGGAGGAACCTTGAGGACTTGAGGCAACAACATCTCCAATTTTCATTGTCTTCTTTCTACGCAAAACACTCAAAGTAATATCATCATCAGTACTCATTTCCTTTTTAGACATGTCCTCAATAATTGAAGGTACGTCATCAACTCCAACACATCTTTCTCAAGCATTAGGATTAACAAAACCTATGCTCTTTCAAACCAGTAGACACATTTAACTCAATATTAACATCAGAAGAAACAACTTGATTCTTAGCACACACAACTGACATATGAGCTAGATCTCTAGTCAGGTCACTATTAGCAACATTTTTCATAGACAACTCTAACTGAGAGAGATTGTTTGCAATATCAATACAAGTAGAAACTAGATAGAAGCATCAATCATTTTATGAACATCTTCTAAAACAATATCAGTCTTACTGGAAGAAATAATAGAAACATGTTTGATCTCAACATAATCAAAAGCCACATTTACATAAATAACGAGAAAAATATTTTTAGAAACTCTAGTTTCTTCTTGATTAACAACAGACTTAACATGCTGGCTAATATTGGATTAAAGTTATCAATATTTTCAACAACAGTATCTTTTCCAACATCCTCACAATTAGTAAATAACCGTTTGATCAACCCAACCATTTCAACATTCATTTTCTTAGGCACATAAAGATCAAATAAATGATTAATAATAGCAACGCCAGCAGACACTATATCACAAACTCTGACCTCCTCTAACACATGATCAGAAACAAAATCCAATTTAATATCTGAAGCAAGAGTAACGACTTTATTCACTTTAAAATACAATAAATACCAATAGAAATATTATCAATGGATGTTCAGGGTCAGGAGACTTATATGCCTCAAGTTATTTTTTTATATTATGTGCATTTATTTCGACAACATGCAAATTAGGAAACAATGCATTCACACAATCAACAACAAACACACCATTTTGTATGATATCCTCAATGACAACATGATCAACAGTTTTTTGAAACGTAACATTCTTTATATTTTTAGACGAGGTAGCTAGCATAGGACTCACATTTTCAATACTTCTAATTTGAACAATAGATTCAACAATAGTACCGATAGACACAATAACTTTACCCAAAGATTCAGCTAGAGTAGTAATATCATCAACAACTTCACATAACACATGAAGTTTAACAAGTACCTCAACATCCACAATATATTCAATCAAAATTTCAGTACAAGCAACAACCAACTTTGTAAGCAATAACGGTTCAATATAATTCACAAAATAACTCTCAATACTATGAAAAGTAGGTTGTGTGAGGATATCAAAATGAAAAGTAATAGCAGACACAATAGTTGCAGCAGGAGTAATGTGTTCAATAATAGAGGAGACAATTAGTTCAACATTATCCATAGTGGTTTTAGTAGGCACAATATTCAGAATATCAGACAACTCAACATGATTAACAACACATTTAATAGGGTTCACATACTCCATCATAGTGCCATCAACATTAACAGTAATTTGGTCAGAATTCACTACCTTAGTTTCTTTAGAACTTACATACATGTCAACATGAGTCAAATTTCTAGAGTTCTCTACAAAAATACTAAGAATAGTAGTAGATGTAATACCTTTAGCTTCTTTAGGAGAGGTAGTAAACTGATTTGAAGTATCTATAGAAACATACCTAGTGGACTTAGTAACATGACTTGGGAGGTCATCTATTTTTATAACAACCTATCTGACTTCACATATTTCCTTCCCAATTTTCTTGTTGTTAACATAGGACTTCACACTGAAGGCACCACCGAAAGAAAAAGAATGTAGTCACACTAAAACACCATATGCAGTGAAGCACAAAGAGGAAGCATTCTCAACTAAAACATTTTTCTTCTTTACTGCTTTGTTCACACGAACAATTTTACTTTCAAATGAGTGTGTACGTTGACAAGTATTTACCATGGAGATAAAAAGCAAAATCGATACAGCTGATGACACATGAAACACACAACTGACAACGTCGACATTTTTTAGAATCACAGACGAGATTTCTCTGCTTATTGAAACTAACTTGACCCACTTTAACTTTCCTTTATGAAAAAATATTTAGTTGCTATAAGTTAATTTTGCGAAGATTTAAAGTTTCCCTTAAGGATATAAATTGAACTATTTCCACAACGTTCATATGGTTATTCTGAAACCTCAATAAGTAAGTAAGTTGACCTCATTTCAAATGCAGCCTTCATGTGTCAAACAAAAAGCTCCACCATTTTTTGAGACATTTCTTTAAAAACTGTGACATCAACATCTTTTTGGATATAACATGTGCTACCAAATATATAGAAATATTTGACATGATTAGATTTCCTCTCCCTCCATATTTCATAAATTGGGCACACATACCATGGTTCAAGAGCAAGGCAATTGGAAATATGACAATCAGTAAAGATTGCTTCAATCTAAAAGTGATATGGTAAAAGTTTAATATGTTGCATCATATCAAGAACCATCTCCTGAATAAAACTATACTTGCTTGTCATTACTCCATTTTGCTGGGAAGACAATTCATGTTGGATTCCTTCATGTGCACAGAAATCTTTAAGACTTTCAATCTACAAAATAGAACTCAATAAGTTCATAATAAGAAGTTTGAGAGCACAATCAGTAGGAAGTAGAGAAAGTTTCTTGGGAGCAACTTTGATTTGTTTTCTAGTCTAATACTCACAACACAAAGCTCCTTCTTCAGACAGAAGATAAGATCTCCCCAGTACAGCTTCTTCTGATATAA

mRNA sequence

GAAAGAACCACCCAAATCTCCCATCCAAAAGTCCTTATAAAAGATCTCCCAACTTTTCTTCCATAAACTTTCTATTACAATCTTTTCAAATCATTCGAAGACAAGCATAGGAGAAAGATAGAAGCAACCAAGAGGATAAGAGGCCTACATTGTCAAACATTAATTTGGAGATACCAGTGGGTAGCTTAGTGGCAATTGTTGGAAGTACAGGGGAAGGGAAGACATCATTACTATCAGCCATGCTTAGAGAACTTCCACCACTTGGGGATTCAATTGTTTCTATTCAAGGAACTATTGCTTATGTTCCACAACTTTCTTGGATTTTTAATGCAACAGTGCGCGATAATATTTTATTTGGTACTACCTTTGATTCGGCCAAATATGAGAAGACAATCGATATAACTGCATTGCAGCATGACCTTGACTTACTACCAGGTGGTGATCTTACTGAAATTGGAGAAAGAGGAGTGAATATTAGTGGTGGCCAAAAACAAAGAGTTTCATTGGCCAGGGCTGTCTATTCCAATTCTGATTCTAATACTCACAACACAAAGCTCCTTCTTCAGACAGAAGATAAGATCTCCCCAGTACAGCTTCTTCTGATATAA

Coding sequence (CDS)

ATGCTTAGAGAACTTCCACCACTTGGGGATTCAATTGTTTCTATTCAAGGAACTATTGCTTATGTTCCACAACTTTCTTGGATTTTTAATGCAACAGTGCGCGATAATATTTTATTTGGTACTACCTTTGATTCGGCCAAATATGAGAAGACAATCGATATAACTGCATTGCAGCATGACCTTGACTTACTACCAGGTGGTGATCTTACTGAAATTGGAGAAAGAGGAGTGAATATTAGTGGTGGCCAAAAACAAAGAGTTTCATTGGCCAGGGCTGTCTATTCCAATTCTGATTCTAATACTCACAACACAAAGCTCCTTCTTCAGACAGAAGATAAGATCTCCCCAGTACAGCTTCTTCTGATATAA

Protein sequence

MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSDSNTHNTKLLLQTEDKISPVQLLLI
Homology
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BLAST of Lsi05G008650 vs. Swiss-Prot
Match: AB1C_ARATH (ABC transporter C family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.7e-39
Identity = 77/98 (78.57%), Postives = 88/98 (89.80%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           ML ELP   D+ V+++G++AYVPQ+SWIFNATVRDNILFG  FD  KYE+ ID+TALQHD
Sbjct: 662 MLGELPARSDATVTLRGSVAYVPQVSWIFNATVRDNILFGAPFDQEKYERVIDVTALQHD 721

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           L+LLPGGDLTEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 722 LELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSD 759

[Close]
BLAST of Lsi05G008650 vs. Swiss-Prot
Match: AB2C_ARATH (ABC transporter C family member 2 OS=Arabidopsis thaliana GN=ABCC2 PE=1 SV=2)

HSP 1 Score: 161.4 bits (407), Expect = 6.3e-39
Identity = 75/98 (76.53%), Postives = 90/98 (91.84%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           +L ELP   D+IV+++G++AYVPQ+SWIFNATVRDNILFG+ FD  KYE+ ID+T+L+HD
Sbjct: 662 ILGELPATSDAIVTLRGSVAYVPQVSWIFNATVRDNILFGSPFDREKYERAIDVTSLKHD 721

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           L+LLPGGDLTEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 722 LELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSD 759

[Close]
BLAST of Lsi05G008650 vs. Swiss-Prot
Match: AB12C_ARATH (ABC transporter C family member 12 OS=Arabidopsis thaliana GN=ABCC12 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 9.4e-35
Identity = 73/98 (74.49%), Postives = 84/98 (85.71%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           ML EL     + V I+G++AYVPQ+SWIFNATVR+NILFG+ F+S +Y + ID TALQHD
Sbjct: 663 MLGELSHAETTSVVIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDATALQHD 722

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           LDLLPG DLTEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 723 LDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSD 760

[Close]
BLAST of Lsi05G008650 vs. Swiss-Prot
Match: AB11C_ARATH (ABC transporter C family member 11 OS=Arabidopsis thaliana GN=ABCC11 PE=2 SV=2)

HSP 1 Score: 146.0 bits (367), Expect = 2.7e-34
Identity = 71/98 (72.45%), Postives = 83/98 (84.69%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           ML EL     S V I+G++AYVPQ+SWIFNAT+R+NILFG+ F+S +Y + ID+TALQHD
Sbjct: 663 MLGELSHAETSSVDIRGSVAYVPQVSWIFNATLRENILFGSDFESERYWRAIDVTALQHD 722

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           LDL PG D TEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 723 LDLFPGRDRTEIGERGVNISGGQKQRVSMARAVYSNSD 760

[Close]
BLAST of Lsi05G008650 vs. Swiss-Prot
Match: ABCC3_DICDI (ABC transporter C family member 3 OS=Dictyostelium discoideum GN=abcC3 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.7e-29
Identity = 61/98 (62.24%), Postives = 80/98 (81.63%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           ML E+  L D  V+++G +AYVPQ +WI NAT++DNILFG+ +D AKY K +++ AL+ D
Sbjct: 487 MLGEMDVL-DGSVAMKGNVAYVPQQAWIINATLKDNILFGSPYDEAKYRKVLEVCALERD 546

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           ++L P GDL EIGERGVN+SGGQKQRVS+ARAVYS+SD
Sbjct: 547 IELFPQGDLVEIGERGVNLSGGQKQRVSIARAVYSDSD 583

[Close]
BLAST of Lsi05G008650 vs. TrEMBL
Match: B9I191_POPTR (MULTIDRUG RESISTANCE-ASSOCIATED protein 2 OS=Populus trichocarpa GN=POPTR_0011s09370g PE=4 SV=2)

HSP 1 Score: 169.9 bits (429), Expect = 2.0e-39
Identity = 82/98 (83.67%), Postives = 90/98 (91.84%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           ML ELP   D+ V I+GT+AYVPQ+SWIFNATVRDNILFG+ FDSA+YEK ID+TALQHD
Sbjct: 656 MLGELPATSDASVVIRGTVAYVPQVSWIFNATVRDNILFGSPFDSARYEKAIDVTALQHD 715

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           LDLLPGGDLTEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 716 LDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSD 753

[Close]
BLAST of Lsi05G008650 vs. TrEMBL
Match: A0A059C696_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02476 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 5.7e-39
Identity = 81/98 (82.65%), Postives = 91/98 (92.86%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           ML ELP +GD+ V I+GTIAYVPQ+SWIFNATVRDNILFG+ F+S +YEK ID+TAL+HD
Sbjct: 663 MLGELPAIGDANVLIRGTIAYVPQVSWIFNATVRDNILFGSPFESRRYEKAIDVTALRHD 722

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           LDLLPGGDLTEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 723 LDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSD 760

[Close]
BLAST of Lsi05G008650 vs. TrEMBL
Match: A0A097P9R5_HEVBR (ABC transporter family protein OS=Hevea brasiliensis GN=ABCC2 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 5.7e-39
Identity = 80/98 (81.63%), Postives = 90/98 (91.84%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           ML ELP + D+   I+GT+AYVPQ+SWIFNATVRDNILFG+ FDSA+YEK ID+T+LQHD
Sbjct: 663 MLGELPAISDASAVIRGTVAYVPQVSWIFNATVRDNILFGSPFDSARYEKAIDVTSLQHD 722

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           LDLLPGGDLTEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 723 LDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSD 760

[Close]
BLAST of Lsi05G008650 vs. TrEMBL
Match: V4UDG8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014029mg PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 7.5e-39
Identity = 79/98 (80.61%), Postives = 90/98 (91.84%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           ML ELPP+ D+   I+GT+AYVPQ+SWIFNATVRDNILFG+ F+ A+YEK ID+T+LQHD
Sbjct: 663 MLGELPPVSDASAVIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHD 722

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           LDLLPGGDLTEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 723 LDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSD 760

[Close]
BLAST of Lsi05G008650 vs. TrEMBL
Match: A0A061DXZ5_THECC (Multidrug resistance-associated protein 2 isoform 3 OS=Theobroma cacao GN=TCM_006080 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-38
Identity = 80/98 (81.63%), Postives = 91/98 (92.86%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           ML ELPP+ D+ V I+GT+AYVPQ+SWIFNATV DNILFG+ F++A+YEK IDITALQHD
Sbjct: 333 MLGELPPMSDASVVIRGTVAYVPQVSWIFNATVCDNILFGSPFEAARYEKAIDITALQHD 392

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           L+LLPGGDLTEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 393 LELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSD 430

[Close]
BLAST of Lsi05G008650 vs. TAIR10
Match: AT1G30400.1 (AT1G30400.1 multidrug resistance-associated protein 1)

HSP 1 Score: 163.3 bits (412), Expect = 9.3e-41
Identity = 77/98 (78.57%), Postives = 88/98 (89.80%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           ML ELP   D+ V+++G++AYVPQ+SWIFNATVRDNILFG  FD  KYE+ ID+TALQHD
Sbjct: 662 MLGELPARSDATVTLRGSVAYVPQVSWIFNATVRDNILFGAPFDQEKYERVIDVTALQHD 721

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           L+LLPGGDLTEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 722 LELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSD 759

[Close]
BLAST of Lsi05G008650 vs. TAIR10
Match: AT2G34660.1 (AT2G34660.1 multidrug resistance-associated protein 2)

HSP 1 Score: 161.4 bits (407), Expect = 3.6e-40
Identity = 75/98 (76.53%), Postives = 90/98 (91.84%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           +L ELP   D+IV+++G++AYVPQ+SWIFNATVRDNILFG+ FD  KYE+ ID+T+L+HD
Sbjct: 662 ILGELPATSDAIVTLRGSVAYVPQVSWIFNATVRDNILFGSPFDREKYERAIDVTSLKHD 721

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           L+LLPGGDLTEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 722 LELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSD 759

[Close]
BLAST of Lsi05G008650 vs. TAIR10
Match: AT1G30410.1 (AT1G30410.1 multidrug resistance-associated protein 13)

HSP 1 Score: 147.5 bits (371), Expect = 5.3e-36
Identity = 73/98 (74.49%), Postives = 84/98 (85.71%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           ML EL     + V I+G++AYVPQ+SWIFNATVR+NILFG+ F+S +Y + ID TALQHD
Sbjct: 636 MLGELSHAETTSVVIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDATALQHD 695

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           LDLLPG DLTEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 696 LDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSD 733

[Close]
BLAST of Lsi05G008650 vs. TAIR10
Match: AT1G30420.1 (AT1G30420.1 multidrug resistance-associated protein 12)

HSP 1 Score: 146.0 bits (367), Expect = 1.5e-35
Identity = 71/98 (72.45%), Postives = 83/98 (84.69%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           ML EL     S V I+G++AYVPQ+SWIFNAT+R+NILFG+ F+S +Y + ID+TALQHD
Sbjct: 663 MLGELSHAETSSVDIRGSVAYVPQVSWIFNATLRENILFGSDFESERYWRAIDVTALQHD 722

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           LDL PG D TEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 723 LDLFPGRDRTEIGERGVNISGGQKQRVSMARAVYSNSD 760

[Close]
BLAST of Lsi05G008650 vs. TAIR10
Match: AT3G60160.1 (AT3G60160.1 multidrug resistance-associated protein 9)

HSP 1 Score: 112.8 bits (281), Expect = 1.4e-25
Identity = 51/86 (59.30%), Postives = 65/86 (75.58%), Query Frame = 1 

Query: 13  VSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHDLDLLPGGDLTEI 72
           V + G  AYVPQ  WI + T+RDNILFG+ ++S KYE+T+   AL  D +L   GDLTEI
Sbjct: 689 VRVSGKQAYVPQSPWILSGTIRDNILFGSMYESEKYERTVKACALIKDFELFSNGDLTEI 748

Query: 73  GERGVNISGGQKQRVSLARAVYSNSD 99
           GERG+N+SGGQKQR+ +ARAVY N+D
Sbjct: 749 GERGINMSGGQKQRIQIARAVYQNAD 774

[Close]
BLAST of Lsi05G008650 vs. NCBI nr
Match: gi|743936349|ref|XP_011012565.1| (PREDICTED: ABC transporter C family member 2-like isoform X5 [Populus euphratica])

HSP 1 Score: 169.9 bits (429), Expect = 2.8e-39
Identity = 82/98 (83.67%), Postives = 90/98 (91.84%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           ML ELP   D+ V I+GT+AYVPQ+SWIFNATVRDNILFG+ FDSA+YEK ID+TALQHD
Sbjct: 663 MLGELPATSDASVVIRGTVAYVPQVSWIFNATVRDNILFGSPFDSARYEKAIDVTALQHD 722

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           LDLLPGGDLTEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 723 LDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSD 760

[Close]
BLAST of Lsi05G008650 vs. NCBI nr
Match: gi|566194570|ref|XP_002317351.2| (MULTIDRUG RESISTANCE-ASSOCIATED protein 2 [Populus trichocarpa])

HSP 1 Score: 169.9 bits (429), Expect = 2.8e-39
Identity = 82/98 (83.67%), Postives = 90/98 (91.84%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           ML ELP   D+ V I+GT+AYVPQ+SWIFNATVRDNILFG+ FDSA+YEK ID+TALQHD
Sbjct: 656 MLGELPATSDASVVIRGTVAYVPQVSWIFNATVRDNILFGSPFDSARYEKAIDVTALQHD 715

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           LDLLPGGDLTEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 716 LDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSD 753

[Close]
BLAST of Lsi05G008650 vs. NCBI nr
Match: gi|743936351|ref|XP_011012566.1| (PREDICTED: ABC transporter C family member 2-like isoform X6 [Populus euphratica])

HSP 1 Score: 169.9 bits (429), Expect = 2.8e-39
Identity = 82/98 (83.67%), Postives = 90/98 (91.84%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           ML ELP   D+ V I+GT+AYVPQ+SWIFNATVRDNILFG+ FDSA+YEK ID+TALQHD
Sbjct: 366 MLGELPATSDASVVIRGTVAYVPQVSWIFNATVRDNILFGSPFDSARYEKAIDVTALQHD 425

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           LDLLPGGDLTEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 426 LDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSD 463

[Close]
BLAST of Lsi05G008650 vs. NCBI nr
Match: gi|743936347|ref|XP_011012564.1| (PREDICTED: ABC transporter C family member 2-like isoform X4 [Populus euphratica])

HSP 1 Score: 169.9 bits (429), Expect = 2.8e-39
Identity = 82/98 (83.67%), Postives = 90/98 (91.84%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           ML ELP   D+ V I+GT+AYVPQ+SWIFNATVRDNILFG+ FDSA+YEK ID+TALQHD
Sbjct: 496 MLGELPATSDASVVIRGTVAYVPQVSWIFNATVRDNILFGSPFDSARYEKAIDVTALQHD 555

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           LDLLPGGDLTEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 556 LDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSD 593

[Close]
BLAST of Lsi05G008650 vs. NCBI nr
Match: gi|743936345|ref|XP_011012563.1| (PREDICTED: ABC transporter C family member 2-like isoform X3 [Populus euphratica])

HSP 1 Score: 169.9 bits (429), Expect = 2.8e-39
Identity = 82/98 (83.67%), Postives = 90/98 (91.84%), Query Frame = 1 

Query: 1   MLRELPPLGDSIVSIQGTIAYVPQLSWIFNATVRDNILFGTTFDSAKYEKTIDITALQHD 60
           ML ELP   D+ V I+GT+AYVPQ+SWIFNATVRDNILFG+ FDSA+YEK ID+TALQHD
Sbjct: 663 MLGELPATSDASVVIRGTVAYVPQVSWIFNATVRDNILFGSPFDSARYEKAIDVTALQHD 722

Query: 61  LDLLPGGDLTEIGERGVNISGGQKQRVSLARAVYSNSD 99
           LDLLPGGDLTEIGERGVNISGGQKQRVS+ARAVYSNSD
Sbjct: 723 LDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSD 760

The following BLAST results are available for this feature:
BLAST of Lsi05G008650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AB1C_ARATH1.7e-3978.57ABC transporter C family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1[more]
AB2C_ARATH6.3e-3976.53ABC transporter C family member 2 OS=Arabidopsis thaliana GN=ABCC2 PE=1 SV=2[more]
AB12C_ARATH9.4e-3574.49ABC transporter C family member 12 OS=Arabidopsis thaliana GN=ABCC12 PE=2 SV=1[more]
AB11C_ARATH2.7e-3472.45ABC transporter C family member 11 OS=Arabidopsis thaliana GN=ABCC11 PE=2 SV=2[more]
ABCC3_DICDI2.7e-2962.24ABC transporter C family member 3 OS=Dictyostelium discoideum GN=abcC3 PE=3 SV=1[more]
BLAST of Lsi05G008650 vs. TrEMBL
Match NameE-valueIdentityDescription
B9I191_POPTR2.0e-3983.67MULTIDRUG RESISTANCE-ASSOCIATED protein 2 OS=Populus trichocarpa GN=POPTR_0011s0... [more]
A0A059C696_EUCGR5.7e-3982.65Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02476 PE=4 SV=1[more]
A0A097P9R5_HEVBR5.7e-3981.63ABC transporter family protein OS=Hevea brasiliensis GN=ABCC2 PE=2 SV=1[more]
V4UDG8_9ROSI7.5e-3980.61Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014029mg PE=4 SV=1[more]
A0A061DXZ5_THECC1.3e-3881.63Multidrug resistance-associated protein 2 isoform 3 OS=Theobroma cacao GN=TCM_00... [more]
BLAST of Lsi05G008650 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G30400.19.3e-4178.57 multidrug resistance-associated protein 1[more]
AT2G34660.13.6e-4076.53 multidrug resistance-associated protein 2[more]
AT1G30410.15.3e-3674.49 multidrug resistance-associated protein 13[more]
AT1G30420.11.5e-3572.45 multidrug resistance-associated protein 12[more]
AT3G60160.11.4e-2559.30 multidrug resistance-associated protein 9[more]
BLAST of Lsi05G008650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|743936349|ref|XP_011012565.1|2.8e-3983.67PREDICTED: ABC transporter C family member 2-like isoform X5 [Populus euphratica... [more]
gi|566194570|ref|XP_002317351.2|2.8e-3983.67MULTIDRUG RESISTANCE-ASSOCIATED protein 2 [Populus trichocarpa][more]
gi|743936351|ref|XP_011012566.1|2.8e-3983.67PREDICTED: ABC transporter C family member 2-like isoform X6 [Populus euphratica... [more]
gi|743936347|ref|XP_011012564.1|2.8e-3983.67PREDICTED: ABC transporter C family member 2-like isoform X4 [Populus euphratica... [more]
gi|743936345|ref|XP_011012563.1|2.8e-3983.67PREDICTED: ABC transporter C family member 2-like isoform X3 [Populus euphratica... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003439ABC_transporter-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATPase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G008650.1Lsi05G008650.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 12..97
score: 4.
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 2..98
score: 2.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 13..98
score: 2.52
NoneNo IPR availablePANTHERPTHR24223FAMILY NOT NAMEDcoord: 1..98
score: 2.1
NoneNo IPR availablePANTHERPTHR24223:SF251ABC TRANSPORTER C FAMILY MEMBER 11-RELATEDcoord: 1..98
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G008650Cucurbita maxima (Rimu)cmalsiB581
Lsi05G008650Cucurbita moschata (Rifu)cmolsiB476
Lsi05G008650Cucurbita moschata (Rifu)cmolsiB558
Lsi05G008650Cucurbita pepo (Zucchini)cpelsiB216
Lsi05G008650Cucurbita pepo (Zucchini)cpelsiB623
Lsi05G008650Watermelon (Charleston Gray)lsiwcgB316
Lsi05G008650Watermelon (97103) v1lsiwmB343
Lsi05G008650Silver-seed gourdcarlsiB651
Lsi05G008650Watermelon (97103) v2lsiwmbB354
Lsi05G008650Wax gourdlsiwgoB461