Lsi05G008640 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G008640
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	ABC transporter, multidrug-resistance, ATP-binding & transmembrane domain
Location	chr05 : 14539934 .. 14545135 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGCGAACACTAGACAAAAATTGTATGTCCTTGAATCTAAGATGATGCATTTCAAGGAAAAAGTTAAACGAAAGAAGGTCGTTGAAGAAACACTTCCTGAAATCACTACTAATGCATTCAGAGTTCAAATGCGAGGTCTTCCTTCTCCTTCGAAGGATTCGTGTGTTGTTTCTCAAACAATTAAACGAAAACGATCAAGTGTCTCCGGACCTTCTAATGCGAAAAGACAGACTGGTTTACTCAGCACCACCACCCTGACTATGACAGATTTAGTTTGTTCTGGTAAGACTATACTCTTTGATTCTCTACATTTTACTATGAGTAGTTCATATAATGAGGACAAGGATTATAGGGTTGTAAGTCTTGAAAGTATTGTAGACAATGCGCATGACAATGTGAAAGACTCTACTGAAGGGGCTGAACATGTTAGGGTTTCTGAAGAGACTACTGTCTCTGTGCATGTTGAGTCCGAATATGGTGTAATTCGTAACCCCCCAAATGTTGATGTTACGGATAAGGGTGCTATTGCTTCTTCAAGAGATCATATTACATTTCTGTCTTCTGTTGTGTTAGAAAGTAGTGTTAGTGAGAATGAAAATGTACAACTTTTTTAGAATGTTGTGTTTGAGGGTGTTACTTGTAATCTATCTGAAAATGTTGTGCTTGCTGAGAAACAAAATGTGGATGTTAGTTCAGATTTTGGGAGAGACATGGTTGATTTAAGTCCTGCTGCTGAGAAACAAAATGAGGAGTTAACTGAGGGTGCAGTCAGAGGTGATAGTATTTGATCCTTCTGTCACTAGTGTTCTGTCTGAGATTGCTGTTGATTATGATAAACATGCTTCTATTAGAAGTTTTGAAAAGGAAGGTTCTGGTTGTGATGATGACGTGCCTCTACGTCAGTTGATGTCCAAAATGAAGACTGTTGCTGACGATGTCATTACTAGTTCTGATACATCAAAAGAAACTACCAATGGAGATAACTCTGGGTACCAATCTGTGTCTTTCAAAGAATGGGCCCTAAAAAGCAGTTCTGAAGATGAAGTTGAGACTGTTTGTGCTCTTATGTCTCATGCTTCCTCTCAAGCTTGAGGGAAGAAGGCTGCTCCTTCCTCTGTACCTCTTGTCTCCCTTAATGGAGTGTCCTTTCACTTTGAAGACAATACCATTCATTTATTGAAAGTTTGTTGTAAAAATGAAAATCTTTGTTGAAAAGTAATTGTCAATTAAGGCACAAGAGTGGTTAGAAATCATGGACTTGATTATAAAAGCTGAGCTAACAAAGATTGTTACGAATCTCGATCCCTTCTATCCCAAACTAGTTTGGGAGTTTATTGTAAACCTCTCTTGGTCTTTTGATAATCCTAGCTCTCTTGACTATAGATGTGTGTATGTGCGTGGTCATTGTTTTGTTTTCTTAGCCTATGTGGTCAACAATTTCCTTGATAGATCTGTCCCAGCTAATGCCAGAGAATTTTGTCCTTCTAGAAGGAGTTAGTGTTGGAGTTGACAGGGGGCATCAGAAAGGCTTGGCCAAATTCTGGACAACTTCCTTCTGCTAAGCTGAGTGCAAAATATGTAGTGTGGTTTCCAATTGGTATTGTAATTTGGTGCCCTTCATCTCATCATTGGAGTTTGTCTATTTCCTTGGCAACTTTGTTATACTAGATCGGGAAGTCAGCTTTGTTTGACTATGGAGCCTTTATTATTGGACAATTAAGGCATCACATTGGGTCTTAAGCCCTCAGACTTCCCATTGCTTATCCCTGTCTAATTTGTGGTATCTTGCTGTCTTAAAAACTTGACTTACTTTCCTCTAGTGAACCTGTTGGTGATGCTCCAAGACAATTAAATTTCAATTACAAGATTGTTCAGTGGCACCATGTGCTTGATATAGTTCCTTCGTCTCCCACAGACAATGAAGATACTTTGAGTGCTGAATTGGTCAATTCCTCTTTTGGCCGAAGGCTTATGCATTTTATGTCTATGGAATTTCACTCTCTTAATGAGCATAGGCGTGAAGTTAGCCTCCTTTTGAATCTGATGCTGAAAGTTATTGATTATAGTGGGCATGTTGGGCCTTCTCAGCAGTGATTTTTTTTAAGCCAGACGGGAATAGTTTGTGGTGGTGGAGTAGTAGTTTTTTGGGTTGTTTGGTGTGGTGTTGTTCAGTGGGCTAGTCTTGTTTGATCTGCAGTTGATGTTTTTTTTTTGGGTTGTTCAGTTTGTTGGATTTCTCTTTTGGTCTTGTTGACTTGTTGCTTTGAATTTTCCTTCTTGTATGAACTTTTTCATAATTACTTGATCTGGTTCTTCTCAGTTATTTTTGTGGGTTGTTTTATTGGTTGGCTGTTTGCGATAATGTTCGGTATGTTTTGTCTTAAAAAATATATATTTTAGCCAAAGTGAGAGTTTGTTAAGATTGTGATATTGGCTACATATATTTGTTTAAGTCTACCGACTTTTCCTCCTTGCGCAGTTTTATAGTTGTCTTAGAATATGTCTCCAAAGAATATTGTCTCAGAAGTTGTTATGCAAGTTGCTGATCTGCAAAATATTTTCTTCCTTATTTAAATTATTTTGCAGATTATTTTCTCTGGATGTTTTCCTTTTTGGTATTTTTCCGAATTTGTATGAAAATATTTTCACTCTTTTCGTTGTGCTATTTAAGCCCAAGAAGTGTATTTGCTAGGGTTGTCGCATCTATTGTATTTGTGAGATTCAGAATTTGAGATTATCAGAGTATTCTGCACACGGTTTTTTAAGAAGAAGATCAGTTGATTTCCTGTCAATGGCGACTTGCTCATAGTGTTTCAACAGTGAACTATTCTATATTCTTTAACTGTTTGGTCTTAGGGGGAGCCTAAGACTAATATGTTTAAGAAGGATTTCTCAGTACTTAGGAGGAGTCTAACTTATCAAGTGAAGGGAGCTCACTAGAAGAAGGGAAGATAACATCAAGTTAGATGGAATCTCACACACTTAGGGGGCGCCTAAGTATTGCACCACTAATATTCACATAGTTAGGAGAAGCCTACGTCCAAGTGAGAGGGAGTTTCACACCTAGGGGGAGCTTAACGATATTTATAGATAGGTTTATCGTTGTAACTGCCTTAATTATATATATTAGTGGACTATCTTTCTTGGGCACTCTACCTCTAGACATAGGTGGTTATCATCGAACTGGGTTATCAACTCTTGTGTGTTGTTTATTCTCTTCTCTCTATTTAGTTCCTTATTGTTGTCTCTGGATGTGTTAGGACGTCTTACGTAACATCTATGTTTCTTATATCGAACCGCTTTCAATTTTTCAAAGACTATGACTTTGGTTTTGGAAATACTTTAAACTTGGGTGTGCTAACTTTAGTTATTTTTTCTTTATGTATTCTCTAGCTTGAAAGTGGGAAAAATGGTGTGAATGGTACAAAAACTTTGACAAAATGTTTTTGTAATTGAAATCAGAGAGAGAATTTTTTGTGCGATTGTAACAATATTTCACAAAGCGAATTTCTTTCTAGTGGGTCGTGGTTTTTCTCCTATTTTGTAGTTTTTCAAGTGAAAATTCTTACGTTTTCTAGTTTTGTTGTTTTCTTTTAATTTATCATTTATTTTCTACTTATTCCTGTAGTAATAGTGTTAGGTTTTTTCTCAACACTTGTTACTCACAACAGACTCGTGTTAGATGCTAATTGAATAAATTGAATAGGATCCAGCACCATACATGTTCACCACATCCAAGACTAATTGTATTTATTATTGTACTATTAATAAATGATGATTTAATTGGTAATTAATAGAAATAAATAGCATAATTATAAAATTTGAGAGCGAAATACTTCAAATTTGCTCGATCTTAGAATAGTTGGCATATGTTGTTTGACCTCTTTTTTCTTTTTTCTGTTAACACAGAGCACATCTCGAGAAGTACAACGACTAGACTCGATAAGTAGATCTCCTGTTTACGCACAATTTGGCGAAGCTCTAAATGGTGTTTCAACTATTCATGCATACAACGCTTATGATAGAATTGCTGAAACAAATGGAAAATCTATGGACAATAACATTAGATTTAGCCTTGTGAACATAAGTGCAAATCAATGGCTTTCAATTCGTTTACAAACTGTGGGAGCTCTAATGATTTGGCTTACAGCAACCTTTGCAGTAATGCAGAATAGCAAGGAAAAAAATCAACAAGCATTTGCTTCCACCATGGGACTTCTACTTACAAATGCTTTAAGTATTACTTCTTTGTTGACAAATGTACTCAAATATGGAAGTATCGTTGAGAATAGTTTAAACTCGGTCGAGCGCGTCGGGACGTATATAGATTTAGCTTCAGAAGCTCCATCGATTATTGAGAATAACCGGCCGCCCTCTGGATGGCCTTCGTCTGGAGATATAAAATTTGATAGTGTTGTGTTACGCTATAGACTTGAGCTCCCACCAGTTTTACATGGGATCTCTTTCAGTGTTTTGTCTAATGAAAAGGTTGGAATTGTGGGACGAACTGGAGCTGGAAAATCAAGCATGCTTAATGCTTTATTTCGTATTGTTGAACTGGAAACAGGAAGAATATTCATTGATGGTTTGAATATAGCAAAATTTGGATTGTTGGATTTGAGAAAAGTTCTTGGGGTTATTCCACAATCACCTGTTCTTTTTTCAGGTAAAGAATTTGTTAATATTTAATTGTCTCATTTTTCTTTGTCTCGTTTGGTAAGCCCTATTTGGTTTTTGAAAATTAAGCGTCTTTAAATATCTCTTTCTACTTCTATTTTGATTATTTTTTAAGTAAAAGGGTTGAATTCTTGGCCAAATTTCAATAACAAAAACAAGTATTCAAAACTTGGTTTGGCTTTTGAAAACATTGGTAGAAATTAGATAACAAAGCAAGAAATTTAGACGTAAAAGGAGTGTTTTATAGGCAATTTTCAAAAACTAAAAACTAAATGATTACCAAACGGGGTTGTGTGTTTTGTTTCCGTTTTTCTCATAGTGTTGTGTTGTTTTATGTAGGAAGTGTTAAGTTTAATCTAGATCCATTCCAAGAACACGACGACGATGATCTTTGGGAAGTTTTGGAGAGGGTACATTTAAAGGATGTCATAAGGAGGAATACGTTGGGCTTGGATGCTGAGGTACATTTCATTTCAATGAACTTTGTGAGAAATTTATGTGTTTGCAATATGATAGTTTAA

mRNA sequence

ATGATGGCGAACACTAGACAAAAATTGTATGTCCTTGAATCTAAGATGATGCATTTCAAGGAAAAAGTTAAACGAAAGAAGGTCGTTGAAGAAACACTTCCTGAAATCACTACTAATGCATTCAGAGTTCAAATGCGAGGTCTTCCTTCTCCTTCGAAGGATTCGTGTGTTGTTTCTCAAACAATTAAACGAAAACGATCAAGTGTCTCCGGACCTTCTAATGCGAAAAGACAGACTGGTTTACTCAGCACCACCACCCTGACTATGACAGATTTAGTTTGTTCTGGTAAGACTATACTCTTTGATTCTCTACATTTTACTATGAGTAGTTCATATAATGAGGACAAGGATTATAGGGTTGTAAGTCTTGAAAGTATTGTAGACAATGCGCATGACAATGTGAAAGACTCTACTGAAGGGGCTGAACATGTTAGGGTTTCTGAAGAGACTACTGTCTCTGTGCATGTTGAGTCCGAATATGGTGTAATTCGTAACCCCCCAAATGTTGATGTTACGGATAAGGGTGCTATTGCTTCTTCAAGAGATCATATTACATTTCTGTCTTCTGTTGTGTTAGAAAGTAGTGTTAGTGAGAATGAAAATTCAGAGGTGATAGTATTTGATCCTTCTGTCACTAGTGTTCTGTCTGAGATTGCTGTTGATTATGATAAACATGCTTCTATTAGAAGTTTTGAAAAGGAAGGTTCTGGTTGTGATGATGACGTGCCTCTACGTCAGTTGATGTCCAAAATGAAGACTGTTGCTGACGATGTCATTACTAGTTCTGATACATCAAAAGAAACTACCAATGGAGATAACTCTGGGTACCAATCTGTGTCTTTCAAAGAATGGGCCCTAAAAAGCAGTTCTGAAGATGAAAGCACATCTCGAGAAGTACAACGACTAGACTCGATAAGTAGATCTCCTGTTTACGCACAATTTGGCGAAGCTCTAAATGGTGTTTCAACTATTCATGCATACAACGCTTATGATAGAATTGCTGAAACAAATGGAAAATCTATGGACAATAACATTAGATTTAGCCTTGTGAACATAAGTGCAAATCAATGGCTTTCAATTCGTTTACAAACTGTGGGAGCTCTAATGATTTGGCTTACAGCAACCTTTGCAGTAATGCAGAATAGCAAGGAAAAAAATCAACAAGCATTTGCTTCCACCATGGGACTTCTACTTACAAATGCTTTAAGTATTACTTCTTTGTTGACAAATGTACTCAAATATGGAAGTATCGTTGAGAATAGTTTAAACTCGGTCGAGCGCGTCGGGACGTATATAGATTTAGCTTCAGAAGCTCCATCGATTATTGAGAATAACCGGCCGCCCTCTGGATGGCCTTCGTCTGGAGATATAAAATTTGATAGTGTTGTGTTACGCTATAGACTTGAGCTCCCACCAGTTTTACATGGGATCTCTTTCAGTGTTTTGTCTAATGAAAAGGTTGGAATTGTGGGACGAACTGGAGCTGGAAAATCAAGCATGCTTAATGCTTTATTTCGTATTGTTGAACTGGAAACAGGAAGAATATTCATTGATGGTTTGAATATAGCAAAATTTGGATTGTTGGATTTGAGAAAAGTTCTTGGGGTTATTCCACAATCACCTGTTCTTTTTTCAGATCCATTCCAAGAACACGACGACGATGATCTTTGGGAAGTTTTGGAGAGGGTACATTTAAAGGATGTCATAAGGAGGAATACGTTGGGCTTGGATGCTGAGGTACATTTCATTTCAATGAACTTTGTGAGAAATTTATGTGTTTGCAATATGATAGTTTAA

Coding sequence (CDS)

ATGATGGCGAACACTAGACAAAAATTGTATGTCCTTGAATCTAAGATGATGCATTTCAAGGAAAAAGTTAAACGAAAGAAGGTCGTTGAAGAAACACTTCCTGAAATCACTACTAATGCATTCAGAGTTCAAATGCGAGGTCTTCCTTCTCCTTCGAAGGATTCGTGTGTTGTTTCTCAAACAATTAAACGAAAACGATCAAGTGTCTCCGGACCTTCTAATGCGAAAAGACAGACTGGTTTACTCAGCACCACCACCCTGACTATGACAGATTTAGTTTGTTCTGGTAAGACTATACTCTTTGATTCTCTACATTTTACTATGAGTAGTTCATATAATGAGGACAAGGATTATAGGGTTGTAAGTCTTGAAAGTATTGTAGACAATGCGCATGACAATGTGAAAGACTCTACTGAAGGGGCTGAACATGTTAGGGTTTCTGAAGAGACTACTGTCTCTGTGCATGTTGAGTCCGAATATGGTGTAATTCGTAACCCCCCAAATGTTGATGTTACGGATAAGGGTGCTATTGCTTCTTCAAGAGATCATATTACATTTCTGTCTTCTGTTGTGTTAGAAAGTAGTGTTAGTGAGAATGAAAATTCAGAGGTGATAGTATTTGATCCTTCTGTCACTAGTGTTCTGTCTGAGATTGCTGTTGATTATGATAAACATGCTTCTATTAGAAGTTTTGAAAAGGAAGGTTCTGGTTGTGATGATGACGTGCCTCTACGTCAGTTGATGTCCAAAATGAAGACTGTTGCTGACGATGTCATTACTAGTTCTGATACATCAAAAGAAACTACCAATGGAGATAACTCTGGGTACCAATCTGTGTCTTTCAAAGAATGGGCCCTAAAAAGCAGTTCTGAAGATGAAAGCACATCTCGAGAAGTACAACGACTAGACTCGATAAGTAGATCTCCTGTTTACGCACAATTTGGCGAAGCTCTAAATGGTGTTTCAACTATTCATGCATACAACGCTTATGATAGAATTGCTGAAACAAATGGAAAATCTATGGACAATAACATTAGATTTAGCCTTGTGAACATAAGTGCAAATCAATGGCTTTCAATTCGTTTACAAACTGTGGGAGCTCTAATGATTTGGCTTACAGCAACCTTTGCAGTAATGCAGAATAGCAAGGAAAAAAATCAACAAGCATTTGCTTCCACCATGGGACTTCTACTTACAAATGCTTTAAGTATTACTTCTTTGTTGACAAATGTACTCAAATATGGAAGTATCGTTGAGAATAGTTTAAACTCGGTCGAGCGCGTCGGGACGTATATAGATTTAGCTTCAGAAGCTCCATCGATTATTGAGAATAACCGGCCGCCCTCTGGATGGCCTTCGTCTGGAGATATAAAATTTGATAGTGTTGTGTTACGCTATAGACTTGAGCTCCCACCAGTTTTACATGGGATCTCTTTCAGTGTTTTGTCTAATGAAAAGGTTGGAATTGTGGGACGAACTGGAGCTGGAAAATCAAGCATGCTTAATGCTTTATTTCGTATTGTTGAACTGGAAACAGGAAGAATATTCATTGATGGTTTGAATATAGCAAAATTTGGATTGTTGGATTTGAGAAAAGTTCTTGGGGTTATTCCACAATCACCTGTTCTTTTTTCAGATCCATTCCAAGAACACGACGACGATGATCTTTGGGAAGTTTTGGAGAGGGTACATTTAAAGGATGTCATAAGGAGGAATACGTTGGGCTTGGATGCTGAGGTACATTTCATTTCAATGAACTTTGTGAGAAATTTATGTGTTTGCAATATGATAGTTTAA

Protein sequence

MMANTRQKLYVLESKMMHFKEKVKRKKVVEETLPEITTNAFRVQMRGLPSPSKDSCVVSQTIKRKRSSVSGPSNAKRQTGLLSTTTLTMTDLVCSGKTILFDSLHFTMSSSYNEDKDYRVVSLESIVDNAHDNVKDSTEGAEHVRVSEETTVSVHVESEYGVIRNPPNVDVTDKGAIASSRDHITFLSSVVLESSVSENENSEVIVFDPSVTSVLSEIAVDYDKHASIRSFEKEGSGCDDDVPLRQLMSKMKTVADDVITSSDTSKETTNGDNSGYQSVSFKEWALKSSSEDESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNISANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVLKYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPPVLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRKVLGVIPQSPVLFSDPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISMNFVRNLCVCNMIV

Homology

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BLAST of Lsi05G008640 vs. Swiss-Prot
Match: AB2C_ARATH (ABC transporter C family member 2 OS=Arabidopsis thaliana GN=ABCC2 PE=1 SV=2)

HSP 1 Score: 432.6 bits (1111), Expect = 7.2e-120
Identity = 217/302 (71.85%), Postives = 254/302 (84.11%), Query Frame = 1


Query: 293  ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
            ++T+REV+R+DSISRSPVYAQFGEALNG+STI AY AYDR+A+ NG+SMDNNIRF+LVN+
Sbjct: 1078 QNTAREVKRMDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGRSMDNNIRFTLVNM 1137

Query: 353  SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
             AN+WL IRL+T+G LMIWLTA+FAVMQN + +NQQAFASTMGLLL+ AL+ITSLLT VL
Sbjct: 1138 GANRWLGIRLETLGGLMIWLTASFAVMQNGRAENQQAFASTMGLLLSYALNITSLLTGVL 1197

Query: 413  KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
            +  S+ ENSLN+VERVG YI++  EAP +IENNRPP GWPSSG IKF+ VVLRYR +LPP
Sbjct: 1198 RLASLAENSLNAVERVGNYIEIPPEAPPVIENNRPPPGWPSSGSIKFEDVVLRYRPQLPP 1257

Query: 473  VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
            VLHG+SF +   +KVGIVGRTGAGKSS+LNALFRIVE+E GRI ID  ++ KFGL+DLRK
Sbjct: 1258 VLHGVSFFIHPTDKVGIVGRTGAGKSSLLNALFRIVEVEKGRILIDDCDVGKFGLMDLRK 1317

Query: 533  VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISM 588
            VLG+IPQSPVLFS       DPF EH+D DLWE LER HLKD IRRN LGLDAEV     
Sbjct: 1318 VLGIIPQSPVLFSGTVRFNLDPFGEHNDADLWESLERAHLKDTIRRNPLGLDAEVSEAGE 1377

[Close]

BLAST of Lsi05G008640 vs. Swiss-Prot
Match: AB1C_ARATH (ABC transporter C family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 8.8e-118
Identity = 215/302 (71.19%), Postives = 251/302 (83.11%), Query Frame = 1


Query: 293  ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
            ++TSRE++R+DS +RSPVYAQFGEALNG+S+I AY AYDR+AE NG+SMDNNIRF+LVN+
Sbjct: 1073 QNTSREIKRMDSTTRSPVYAQFGEALNGLSSIRAYKAYDRMAEINGRSMDNNIRFTLVNM 1132

Query: 353  SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
            +AN+WL IRL+ +G LM+WLTA+ AVMQN K  NQQA+ASTMGLLL+ ALSITS LT VL
Sbjct: 1133 AANRWLGIRLEVLGGLMVWLTASLAVMQNGKAANQQAYASTMGLLLSYALSITSSLTAVL 1192

Query: 413  KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
            +  S+ ENSLNSVERVG YI++ SEAP +IENNRPP GWPSSG IKF+ VVLRYR ELPP
Sbjct: 1193 RLASLAENSLNSVERVGNYIEIPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPP 1252

Query: 473  VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
            VLHG+SF +   +KVGIVGRTGAGKSS+LNALFRIVELE GRI ID  +I +FGL+DLRK
Sbjct: 1253 VLHGVSFLISPMDKVGIVGRTGAGKSSLLNALFRIVELEKGRILIDECDIGRFGLMDLRK 1312

Query: 533  VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISM 588
            VLG+IPQ+PVLFS       DPF EH+D DLWE LER HLKD IRRN LGLDAEV     
Sbjct: 1313 VLGIIPQAPVLFSGTVRFNLDPFSEHNDADLWESLERAHLKDTIRRNPLGLDAEVTEAGE 1372

[Close]

BLAST of Lsi05G008640 vs. Swiss-Prot
Match: AB12C_ARATH (ABC transporter C family member 12 OS=Arabidopsis thaliana GN=ABCC12 PE=2 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 2.7e-111
Identity = 205/295 (69.49%), Postives = 239/295 (81.02%), Query Frame = 1


Query: 293  ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
            +STSREV+RLDS++RSP+YAQFGEALNG+S+I AY AYDR+A+ NGKSMDNNIRF+L N 
Sbjct: 1071 QSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANT 1130

Query: 353  SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
            S+N+WL+IRL+T+G +MIWLTATFAV+QN    NQ  FASTMGLLL+  L+ITSLL+ VL
Sbjct: 1131 SSNRWLTIRLETLGGVMIWLTATFAVLQNGNTNNQAGFASTMGLLLSYTLNITSLLSGVL 1190

Query: 413  KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
            +  S  ENSLNSVERVG YIDL SEA  IIENNRP  GWPS G IKF+ V LRYR  LPP
Sbjct: 1191 RQASRAENSLNSVERVGNYIDLPSEATDIIENNRPVCGWPSGGSIKFEDVHLRYRPGLPP 1250

Query: 473  VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
            VLHG++F V  +EKVG+VGRTGAGKSSMLNALFRIVE+E GRI ID  ++AKFGL D+R+
Sbjct: 1251 VLHGLTFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEVEKGRIMIDDCDVAKFGLTDVRR 1310

Query: 533  VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEV 581
            VL +IPQSPVLFS       DPF EH+D  LWE L R H+KDVI RN  GLDAEV
Sbjct: 1311 VLSIIPQSPVLFSGTVRFNIDPFSEHNDAGLWEALHRAHIKDVISRNPFGLDAEV 1365

[Close]

BLAST of Lsi05G008640 vs. Swiss-Prot
Match: AB11C_ARATH (ABC transporter C family member 11 OS=Arabidopsis thaliana GN=ABCC11 PE=2 SV=2)

HSP 1 Score: 397.9 bits (1021), Expect = 2.0e-109
Identity = 204/302 (67.55%), Postives = 243/302 (80.46%), Query Frame = 1


Query: 293  ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
            +STSREV+RLDS++RSP+YA FGEALNG+S+I AY AYDR+A+ NGKSMDNNIRF+L + 
Sbjct: 1071 QSTSREVRRLDSVTRSPIYALFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLAST 1130

Query: 353  SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
            S+N+WL+IR +++G +MIWLTATFAV++    +NQ  FASTMGLLL+  L+IT+LL+ VL
Sbjct: 1131 SSNRWLTIRSESLGGVMIWLTATFAVLRYGNAENQAVFASTMGLLLSYTLNITTLLSGVL 1190

Query: 413  KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
            +  S  ENSLNSVERVG YIDL SEA +IIENNRP SGWPS G I+F+ V LRYR  LPP
Sbjct: 1191 RQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIQFEDVHLRYRPGLPP 1250

Query: 473  VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
            VLHG+SF V  +EKVG+VGRTGAGKSSMLNAL+RIVELE GRI ID  ++AKFGL DLR+
Sbjct: 1251 VLHGLSFFVYPSEKVGVVGRTGAGKSSMLNALYRIVELEKGRILIDDYDVAKFGLTDLRR 1310

Query: 533  VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISM 588
            VL +IPQSPVLFS       DPF EH+D DLWE LER H+KDVI RN  GLDAEV     
Sbjct: 1311 VLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGE 1370

[Close]

BLAST of Lsi05G008640 vs. Swiss-Prot
Match: ABCCC_DICDI (ABC transporter C family member 12 OS=Dictyostelium discoideum GN=abcC12 PE=3 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 9.9e-61
Identity = 134/300 (44.67%), Postives = 184/300 (61.33%), Query Frame = 1


Query: 295  TSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNISA 354
            TSR +QR+++I+RSP++  F E LNGV +I AY         N K +D+N    L   + 
Sbjct: 890  TSRGLQRIEAITRSPIFNHFSETLNGVVSIRAYKKQQENILKNQKRLDDNNNCYLTLQAM 949

Query: 355  NQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVLKY 414
            N+WL +RL  +G L+++ +  F  +     K      S +GL+L+ ALSITS L   +  
Sbjct: 950  NRWLGLRLDFLGNLIVFFSCIFITL-----KKDTISPSDVGLVLSYALSITSNLNQGVLQ 1009

Query: 415  GSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPPVL 474
             +  E  +NSVER+  YI  A EAP II++ RP   WP +G IKFD++V+RYR  L PVL
Sbjct: 1010 AADTETKMNSVERISQYIRGAVEAPQIIDDCRPSPDWPINGSIKFDNLVMRYREGLDPVL 1069

Query: 475  HGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRKVL 534
             GI+  + + EK+GIVGRTGAGKSS++ ALFR++E   G I IDG NIAKFGL DLR+ L
Sbjct: 1070 KGITCEIKAKEKIGIVGRTGAGKSSIVLALFRLIEASEGSISIDGENIAKFGLKDLRRNL 1129

Query: 535  GVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISMNF 588
             +IPQ PVLFS       DPF E  D +LW +L+ + L  V +    GL+++V     NF
Sbjct: 1130 AIIPQDPVLFSGTLRENLDPFNECPDHELWSILDDIQLSKVFKSTEEGLNSKVTENGENF 1184

[Close]

BLAST of Lsi05G008640 vs. TrEMBL
Match: A0A072V4U7_MEDTR (Multidrug resistance protein ABC transporter family protein OS=Medicago truncatula GN=MTR_2g019020 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.3e-123
Identity = 230/302 (76.16%), Postives = 261/302 (86.42%), Query Frame = 1


Query: 293 ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
           +ST+REV+RLDSISRSPVYAQFGEALNG+STI AY AYDR+A+ NG+SMDNNIR++LVNI
Sbjct: 618 QSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGRSMDNNIRYTLVNI 677

Query: 353 SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
           SAN+WL+IRL+T+G LMIW TATFAVMQN + +NQQ FASTMGLLL+ AL+ITSLLT VL
Sbjct: 678 SANRWLAIRLETLGGLMIWFTATFAVMQNGRAENQQEFASTMGLLLSYALNITSLLTGVL 737

Query: 413 KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
           +  S+ ENSLNSVERVGTYIDL SEAPS+I++NRPP GWPSSG IKFD VVLRYR ELPP
Sbjct: 738 RLASLAENSLNSVERVGTYIDLPSEAPSVIDDNRPPPGWPSSGSIKFDEVVLRYRPELPP 797

Query: 473 VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
           VLHG+SF++  ++KVGIVGRTGAGKSSMLNALFRIVELE GRI ID  +IAKFGL DLRK
Sbjct: 798 VLHGLSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELEKGRILIDDRDIAKFGLADLRK 857

Query: 533 VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISM 588
           VLG+IPQSPVLFS       DPF EH+D DLWE LER HLKDVIRRN+LGLDAEV     
Sbjct: 858 VLGIIPQSPVLFSGTVRFNLDPFTEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGE 917

[Close]

BLAST of Lsi05G008640 vs. TrEMBL
Match: A0A072VEV1_MEDTR (Multidrug resistance protein ABC transporter family protein OS=Medicago truncatula GN=MTR_2g019020 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.3e-123
Identity = 230/302 (76.16%), Postives = 261/302 (86.42%), Query Frame = 1


Query: 293  ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
            +ST+REV+RLDSISRSPVYAQFGEALNG+STI AY AYDR+A+ NG+SMDNNIR++LVNI
Sbjct: 836  QSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGRSMDNNIRYTLVNI 895

Query: 353  SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
            SAN+WL+IRL+T+G LMIW TATFAVMQN + +NQQ FASTMGLLL+ AL+ITSLLT VL
Sbjct: 896  SANRWLAIRLETLGGLMIWFTATFAVMQNGRAENQQEFASTMGLLLSYALNITSLLTGVL 955

Query: 413  KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
            +  S+ ENSLNSVERVGTYIDL SEAPS+I++NRPP GWPSSG IKFD VVLRYR ELPP
Sbjct: 956  RLASLAENSLNSVERVGTYIDLPSEAPSVIDDNRPPPGWPSSGSIKFDEVVLRYRPELPP 1015

Query: 473  VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
            VLHG+SF++  ++KVGIVGRTGAGKSSMLNALFRIVELE GRI ID  +IAKFGL DLRK
Sbjct: 1016 VLHGLSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELEKGRILIDDRDIAKFGLADLRK 1075

Query: 533  VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISM 588
            VLG+IPQSPVLFS       DPF EH+D DLWE LER HLKDVIRRN+LGLDAEV     
Sbjct: 1076 VLGIIPQSPVLFSGTVRFNLDPFTEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGE 1135

[Close]

BLAST of Lsi05G008640 vs. TrEMBL
Match: A0A072V5R7_MEDTR (Multidrug resistance protein ABC transporter family protein OS=Medicago truncatula GN=MTR_2g019020 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.3e-123
Identity = 230/302 (76.16%), Postives = 261/302 (86.42%), Query Frame = 1


Query: 293  ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
            +ST+REV+RLDSISRSPVYAQFGEALNG+STI AY AYDR+A+ NG+SMDNNIR++LVNI
Sbjct: 890  QSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGRSMDNNIRYTLVNI 949

Query: 353  SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
            SAN+WL+IRL+T+G LMIW TATFAVMQN + +NQQ FASTMGLLL+ AL+ITSLLT VL
Sbjct: 950  SANRWLAIRLETLGGLMIWFTATFAVMQNGRAENQQEFASTMGLLLSYALNITSLLTGVL 1009

Query: 413  KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
            +  S+ ENSLNSVERVGTYIDL SEAPS+I++NRPP GWPSSG IKFD VVLRYR ELPP
Sbjct: 1010 RLASLAENSLNSVERVGTYIDLPSEAPSVIDDNRPPPGWPSSGSIKFDEVVLRYRPELPP 1069

Query: 473  VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
            VLHG+SF++  ++KVGIVGRTGAGKSSMLNALFRIVELE GRI ID  +IAKFGL DLRK
Sbjct: 1070 VLHGLSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELEKGRILIDDRDIAKFGLADLRK 1129

Query: 533  VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISM 588
            VLG+IPQSPVLFS       DPF EH+D DLWE LER HLKDVIRRN+LGLDAEV     
Sbjct: 1130 VLGIIPQSPVLFSGTVRFNLDPFTEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGE 1189

[Close]

BLAST of Lsi05G008640 vs. TrEMBL
Match: A0A072V4E0_MEDTR (Multidrug resistance protein ABC transporter family protein OS=Medicago truncatula GN=MTR_2g019020 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.3e-123
Identity = 230/302 (76.16%), Postives = 261/302 (86.42%), Query Frame = 1


Query: 293  ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
            +ST+REV+RLDSISRSPVYAQFGEALNG+STI AY AYDR+A+ NG+SMDNNIR++LVNI
Sbjct: 1073 QSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGRSMDNNIRYTLVNI 1132

Query: 353  SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
            SAN+WL+IRL+T+G LMIW TATFAVMQN + +NQQ FASTMGLLL+ AL+ITSLLT VL
Sbjct: 1133 SANRWLAIRLETLGGLMIWFTATFAVMQNGRAENQQEFASTMGLLLSYALNITSLLTGVL 1192

Query: 413  KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
            +  S+ ENSLNSVERVGTYIDL SEAPS+I++NRPP GWPSSG IKFD VVLRYR ELPP
Sbjct: 1193 RLASLAENSLNSVERVGTYIDLPSEAPSVIDDNRPPPGWPSSGSIKFDEVVLRYRPELPP 1252

Query: 473  VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
            VLHG+SF++  ++KVGIVGRTGAGKSSMLNALFRIVELE GRI ID  +IAKFGL DLRK
Sbjct: 1253 VLHGLSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELEKGRILIDDRDIAKFGLADLRK 1312

Query: 533  VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISM 588
            VLG+IPQSPVLFS       DPF EH+D DLWE LER HLKDVIRRN+LGLDAEV     
Sbjct: 1313 VLGIIPQSPVLFSGTVRFNLDPFTEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGE 1372

[Close]

BLAST of Lsi05G008640 vs. TrEMBL
Match: G7IP56_MEDTR (Multidrug resistance protein ABC transporter family protein OS=Medicago truncatula GN=MTR_2g019020 PE=4 SV=2)

HSP 1 Score: 451.8 bits (1161), Expect = 1.3e-123
Identity = 230/302 (76.16%), Postives = 261/302 (86.42%), Query Frame = 1


Query: 293  ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
            +ST+REV+RLDSISRSPVYAQFGEALNG+STI AY AYDR+A+ NG+SMDNNIR++LVNI
Sbjct: 1073 QSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGRSMDNNIRYTLVNI 1132

Query: 353  SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
            SAN+WL+IRL+T+G LMIW TATFAVMQN + +NQQ FASTMGLLL+ AL+ITSLLT VL
Sbjct: 1133 SANRWLAIRLETLGGLMIWFTATFAVMQNGRAENQQEFASTMGLLLSYALNITSLLTGVL 1192

Query: 413  KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
            +  S+ ENSLNSVERVGTYIDL SEAPS+I++NRPP GWPSSG IKFD VVLRYR ELPP
Sbjct: 1193 RLASLAENSLNSVERVGTYIDLPSEAPSVIDDNRPPPGWPSSGSIKFDEVVLRYRPELPP 1252

Query: 473  VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
            VLHG+SF++  ++KVGIVGRTGAGKSSMLNALFRIVELE GRI ID  +IAKFGL DLRK
Sbjct: 1253 VLHGLSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELEKGRILIDDRDIAKFGLADLRK 1312

Query: 533  VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISM 588
            VLG+IPQSPVLFS       DPF EH+D DLWE LER HLKDVIRRN+LGLDAEV     
Sbjct: 1313 VLGIIPQSPVLFSGTVRFNLDPFTEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGE 1372

[Close]

BLAST of Lsi05G008640 vs. TAIR10
Match: AT2G34660.1 (AT2G34660.1 multidrug resistance-associated protein 2)

HSP 1 Score: 432.6 bits (1111), Expect = 4.0e-121
Identity = 217/302 (71.85%), Postives = 254/302 (84.11%), Query Frame = 1


Query: 293  ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
            ++T+REV+R+DSISRSPVYAQFGEALNG+STI AY AYDR+A+ NG+SMDNNIRF+LVN+
Sbjct: 1078 QNTAREVKRMDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGRSMDNNIRFTLVNM 1137

Query: 353  SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
             AN+WL IRL+T+G LMIWLTA+FAVMQN + +NQQAFASTMGLLL+ AL+ITSLLT VL
Sbjct: 1138 GANRWLGIRLETLGGLMIWLTASFAVMQNGRAENQQAFASTMGLLLSYALNITSLLTGVL 1197

Query: 413  KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
            +  S+ ENSLN+VERVG YI++  EAP +IENNRPP GWPSSG IKF+ VVLRYR +LPP
Sbjct: 1198 RLASLAENSLNAVERVGNYIEIPPEAPPVIENNRPPPGWPSSGSIKFEDVVLRYRPQLPP 1257

Query: 473  VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
            VLHG+SF +   +KVGIVGRTGAGKSS+LNALFRIVE+E GRI ID  ++ KFGL+DLRK
Sbjct: 1258 VLHGVSFFIHPTDKVGIVGRTGAGKSSLLNALFRIVEVEKGRILIDDCDVGKFGLMDLRK 1317

Query: 533  VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISM 588
            VLG+IPQSPVLFS       DPF EH+D DLWE LER HLKD IRRN LGLDAEV     
Sbjct: 1318 VLGIIPQSPVLFSGTVRFNLDPFGEHNDADLWESLERAHLKDTIRRNPLGLDAEVSEAGE 1377

[Close]

BLAST of Lsi05G008640 vs. TAIR10
Match: AT1G30400.1 (AT1G30400.1 multidrug resistance-associated protein 1)

HSP 1 Score: 425.6 bits (1093), Expect = 4.9e-119
Identity = 215/302 (71.19%), Postives = 251/302 (83.11%), Query Frame = 1


Query: 293  ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
            ++TSRE++R+DS +RSPVYAQFGEALNG+S+I AY AYDR+AE NG+SMDNNIRF+LVN+
Sbjct: 1073 QNTSREIKRMDSTTRSPVYAQFGEALNGLSSIRAYKAYDRMAEINGRSMDNNIRFTLVNM 1132

Query: 353  SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
            +AN+WL IRL+ +G LM+WLTA+ AVMQN K  NQQA+ASTMGLLL+ ALSITS LT VL
Sbjct: 1133 AANRWLGIRLEVLGGLMVWLTASLAVMQNGKAANQQAYASTMGLLLSYALSITSSLTAVL 1192

Query: 413  KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
            +  S+ ENSLNSVERVG YI++ SEAP +IENNRPP GWPSSG IKF+ VVLRYR ELPP
Sbjct: 1193 RLASLAENSLNSVERVGNYIEIPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPP 1252

Query: 473  VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
            VLHG+SF +   +KVGIVGRTGAGKSS+LNALFRIVELE GRI ID  +I +FGL+DLRK
Sbjct: 1253 VLHGVSFLISPMDKVGIVGRTGAGKSSLLNALFRIVELEKGRILIDECDIGRFGLMDLRK 1312

Query: 533  VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISM 588
            VLG+IPQ+PVLFS       DPF EH+D DLWE LER HLKD IRRN LGLDAEV     
Sbjct: 1313 VLGIIPQAPVLFSGTVRFNLDPFSEHNDADLWESLERAHLKDTIRRNPLGLDAEVTEAGE 1372

[Close]

BLAST of Lsi05G008640 vs. TAIR10
Match: AT1G30410.1 (AT1G30410.1 multidrug resistance-associated protein 13)

HSP 1 Score: 404.1 bits (1037), Expect = 1.5e-112
Identity = 205/295 (69.49%), Postives = 239/295 (81.02%), Query Frame = 1


Query: 293  ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
            +STSREV+RLDS++RSP+YAQFGEALNG+S+I AY AYDR+A+ NGKSMDNNIRF+L N 
Sbjct: 1044 QSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANT 1103

Query: 353  SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
            S+N+WL+IRL+T+G +MIWLTATFAV+QN    NQ  FASTMGLLL+  L+ITSLL+ VL
Sbjct: 1104 SSNRWLTIRLETLGGVMIWLTATFAVLQNGNTNNQAGFASTMGLLLSYTLNITSLLSGVL 1163

Query: 413  KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
            +  S  ENSLNSVERVG YIDL SEA  IIENNRP  GWPS G IKF+ V LRYR  LPP
Sbjct: 1164 RQASRAENSLNSVERVGNYIDLPSEATDIIENNRPVCGWPSGGSIKFEDVHLRYRPGLPP 1223

Query: 473  VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
            VLHG++F V  +EKVG+VGRTGAGKSSMLNALFRIVE+E GRI ID  ++AKFGL D+R+
Sbjct: 1224 VLHGLTFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEVEKGRIMIDDCDVAKFGLTDVRR 1283

Query: 533  VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEV 581
            VL +IPQSPVLFS       DPF EH+D  LWE L R H+KDVI RN  GLDAEV
Sbjct: 1284 VLSIIPQSPVLFSGTVRFNIDPFSEHNDAGLWEALHRAHIKDVISRNPFGLDAEV 1338

[Close]

BLAST of Lsi05G008640 vs. TAIR10
Match: AT1G30420.1 (AT1G30420.1 multidrug resistance-associated protein 12)

HSP 1 Score: 397.9 bits (1021), Expect = 1.1e-110
Identity = 204/302 (67.55%), Postives = 243/302 (80.46%), Query Frame = 1


Query: 293  ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
            +STSREV+RLDS++RSP+YA FGEALNG+S+I AY AYDR+A+ NGKSMDNNIRF+L + 
Sbjct: 1071 QSTSREVRRLDSVTRSPIYALFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLAST 1130

Query: 353  SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
            S+N+WL+IR +++G +MIWLTATFAV++    +NQ  FASTMGLLL+  L+IT+LL+ VL
Sbjct: 1131 SSNRWLTIRSESLGGVMIWLTATFAVLRYGNAENQAVFASTMGLLLSYTLNITTLLSGVL 1190

Query: 413  KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
            +  S  ENSLNSVERVG YIDL SEA +IIENNRP SGWPS G I+F+ V LRYR  LPP
Sbjct: 1191 RQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIQFEDVHLRYRPGLPP 1250

Query: 473  VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
            VLHG+SF V  +EKVG+VGRTGAGKSSMLNAL+RIVELE GRI ID  ++AKFGL DLR+
Sbjct: 1251 VLHGLSFFVYPSEKVGVVGRTGAGKSSMLNALYRIVELEKGRILIDDYDVAKFGLTDLRR 1310

Query: 533  VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISM 588
            VL +IPQSPVLFS       DPF EH+D DLWE LER H+KDVI RN  GLDAEV     
Sbjct: 1311 VLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGE 1370

[Close]

BLAST of Lsi05G008640 vs. TAIR10
Match: AT3G62700.1 (AT3G62700.1 multidrug resistance-associated protein 10)

HSP 1 Score: 213.4 bits (542), Expect = 3.9e-55
Identity = 113/294 (38.44%), Postives = 176/294 (59.86%), Query Frame = 1


Query: 294  STSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNIS 353
            ++SRE+ RLDSI+++PV   F E++ GV TI A+       + N K ++ N+R    N  
Sbjct: 1138 ASSRELTRLDSITKAPVIHHFSESIAGVMTIRAFKKQPMFRQENVKRVNANLRMDFHNNG 1197

Query: 354  ANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVLK 413
            +N+WL  RL+ +G+ ++ ++A F VM  S     +     +GL L+  LS+  +L   + 
Sbjct: 1198 SNEWLGFRLELIGSWVLCISALFMVMLPSNIIKPE----NVGLSLSYGLSLNGVLFWAIY 1257

Query: 414  YGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPPV 473
                +EN + SVER+  + D+ +EA   I+ +RPP  WP  G+I+ + V +RYR   P V
Sbjct: 1258 LSCFIENKMVSVERIKQFTDIPAEAKWEIKESRPPPNWPYKGNIRLEDVKVRYRPNTPLV 1317

Query: 474  LHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRKV 533
            L G++  +   EK+G+VGRTG+GKS+++  LFR+VE   G+I IDG++I   GL DLR  
Sbjct: 1318 LKGLTIDIKGGEKIGVVGRTGSGKSTLIQVLFRLVEPSGGKIIIDGIDICTLGLHDLRSR 1377

Query: 534  LGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEV 581
             G+IPQ PVLF        DP +++ D+++W+ LER  LKDV+      LD+ V
Sbjct: 1378 FGIIPQEPVLFEGTVRSNIDPTEKYSDEEIWKSLERCQLKDVVASKPEKLDSLV 1427

[Close]

BLAST of Lsi05G008640 vs. NCBI nr
Match: gi|659071520|ref|XP_008460280.1| (PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 2-like, partial [Cucumis melo])

HSP 1 Score: 476.9 bits (1226), Expect = 5.3e-131
Identity = 252/302 (83.44%), Postives = 267/302 (88.41%), Query Frame = 1


Query: 293  ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
            + TSREV+RLDSISRSPVYAQF EALNGVSTI AY AYDRI ETNGKSMDNNIRFSL  I
Sbjct: 722  QRTSREVRRLDSISRSPVYAQFTEALNGVSTIRAYKAYDRIVETNGKSMDNNIRFSLAMI 781

Query: 353  SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
            S NQWL+IRLQTVGALMIWLT TFAVM+NSK KNQQAFA+TMGLL+TN L+ITSLLT+VL
Sbjct: 782  SGNQWLAIRLQTVGALMIWLTTTFAVMRNSKXKNQQAFATTMGLLITNVLTITSLLTDVL 841

Query: 413  KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
              GS+VENSLNSVERVG YIDLASEAPSIIE+NRPPSGWPS G IKFDSVVLRYR ELPP
Sbjct: 842  TLGSMVENSLNSVERVGRYIDLASEAPSIIESNRPPSGWPSFGVIKFDSVVLRYRPELPP 901

Query: 473  VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
            VLHGISFSVLS EKVGIVGRTGAGKSS+LNALFRIVEL+TGRIFIDGL+IAKFGL DLRK
Sbjct: 902  VLHGISFSVLSKEKVGIVGRTGAGKSSILNALFRIVELDTGRIFIDGLDIAKFGLWDLRK 961

Query: 533  VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISM 588
            V+G+IPQSPVLFS       DPFQEH D DLWEVLER HL DVIRRNTLGLDAEV     
Sbjct: 962  VVGIIPQSPVLFSGSVRFNLDPFQEHADFDLWEVLERTHLMDVIRRNTLGLDAEVLEGGQ 1021

[Close]

BLAST of Lsi05G008640 vs. NCBI nr
Match: gi|922388195|ref|XP_013462661.1| (multidrug resistance protein ABC transporter family protein [Medicago truncatula])

HSP 1 Score: 451.8 bits (1161), Expect = 1.8e-123
Identity = 230/302 (76.16%), Postives = 261/302 (86.42%), Query Frame = 1


Query: 293  ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
            +ST+REV+RLDSISRSPVYAQFGEALNG+STI AY AYDR+A+ NG+SMDNNIR++LVNI
Sbjct: 836  QSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGRSMDNNIRYTLVNI 895

Query: 353  SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
            SAN+WL+IRL+T+G LMIW TATFAVMQN + +NQQ FASTMGLLL+ AL+ITSLLT VL
Sbjct: 896  SANRWLAIRLETLGGLMIWFTATFAVMQNGRAENQQEFASTMGLLLSYALNITSLLTGVL 955

Query: 413  KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
            +  S+ ENSLNSVERVGTYIDL SEAPS+I++NRPP GWPSSG IKFD VVLRYR ELPP
Sbjct: 956  RLASLAENSLNSVERVGTYIDLPSEAPSVIDDNRPPPGWPSSGSIKFDEVVLRYRPELPP 1015

Query: 473  VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
            VLHG+SF++  ++KVGIVGRTGAGKSSMLNALFRIVELE GRI ID  +IAKFGL DLRK
Sbjct: 1016 VLHGLSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELEKGRILIDDRDIAKFGLADLRK 1075

Query: 533  VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISM 588
            VLG+IPQSPVLFS       DPF EH+D DLWE LER HLKDVIRRN+LGLDAEV     
Sbjct: 1076 VLGIIPQSPVLFSGTVRFNLDPFTEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGE 1135

[Close]

BLAST of Lsi05G008640 vs. NCBI nr
Match: gi|659089773|ref|XP_008445683.1| (PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 2-like [Cucumis melo])

HSP 1 Score: 451.8 bits (1161), Expect = 1.8e-123
Identity = 230/302 (76.16%), Postives = 258/302 (85.43%), Query Frame = 1


Query: 293  ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
            +ST+REV+RLDSISRSPVYAQF EALNG+STI AY AYDR+AE NGKSMDNNIRF+LVN+
Sbjct: 1077 QSTAREVKRLDSISRSPVYAQFTEALNGLSTIRAYKAYDRMAEVNGKSMDNNIRFTLVNM 1136

Query: 353  SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
            S N+WL IRL+ VG LMIWLT TFAVMQN + + QQ FASTMGLLL+ AL+ITSLLT VL
Sbjct: 1137 SGNRWLGIRLEAVGGLMIWLTTTFAVMQNGRAEKQQEFASTMGLLLSYALNITSLLTGVL 1196

Query: 413  KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
            + GS+ ENSLNSVERVGTYIDL SEAPSIIE+NRPPSGWPSSG I+F+ VVLRYR ELPP
Sbjct: 1197 RLGSVAENSLNSVERVGTYIDLPSEAPSIIESNRPPSGWPSSGLIRFEDVVLRYRPELPP 1256

Query: 473  VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
            VLHG+SF++  NEKVGIVGRTGAGKSSMLNALFRIVELE G+IFIDG ++AKFGL DLR 
Sbjct: 1257 VLHGLSFTIFPNEKVGIVGRTGAGKSSMLNALFRIVELERGKIFIDGFDVAKFGLFDLRN 1316

Query: 533  VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISM 588
            +LG+IPQSPVLFS       DPF  H+D DLWE LERVHLKDVIRRN+ GLDAEV     
Sbjct: 1317 ILGIIPQSPVLFSGTVRFNLDPFNNHNDADLWEALERVHLKDVIRRNSFGLDAEVSESGE 1376

[Close]

BLAST of Lsi05G008640 vs. NCBI nr
Match: gi|922388197|ref|XP_013462662.1| (multidrug resistance protein ABC transporter family protein [Medicago truncatula])

HSP 1 Score: 451.8 bits (1161), Expect = 1.8e-123
Identity = 230/302 (76.16%), Postives = 261/302 (86.42%), Query Frame = 1


Query: 293 ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
           +ST+REV+RLDSISRSPVYAQFGEALNG+STI AY AYDR+A+ NG+SMDNNIR++LVNI
Sbjct: 618 QSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGRSMDNNIRYTLVNI 677

Query: 353 SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
           SAN+WL+IRL+T+G LMIW TATFAVMQN + +NQQ FASTMGLLL+ AL+ITSLLT VL
Sbjct: 678 SANRWLAIRLETLGGLMIWFTATFAVMQNGRAENQQEFASTMGLLLSYALNITSLLTGVL 737

Query: 413 KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
           +  S+ ENSLNSVERVGTYIDL SEAPS+I++NRPP GWPSSG IKFD VVLRYR ELPP
Sbjct: 738 RLASLAENSLNSVERVGTYIDLPSEAPSVIDDNRPPPGWPSSGSIKFDEVVLRYRPELPP 797

Query: 473 VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
           VLHG+SF++  ++KVGIVGRTGAGKSSMLNALFRIVELE GRI ID  +IAKFGL DLRK
Sbjct: 798 VLHGLSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELEKGRILIDDRDIAKFGLADLRK 857

Query: 533 VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISM 588
           VLG+IPQSPVLFS       DPF EH+D DLWE LER HLKDVIRRN+LGLDAEV     
Sbjct: 858 VLGIIPQSPVLFSGTVRFNLDPFTEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGE 917

[Close]

BLAST of Lsi05G008640 vs. NCBI nr
Match: gi|922388193|ref|XP_013462660.1| (multidrug resistance protein ABC transporter family protein [Medicago truncatula])

HSP 1 Score: 451.8 bits (1161), Expect = 1.8e-123
Identity = 230/302 (76.16%), Postives = 261/302 (86.42%), Query Frame = 1


Query: 293  ESTSREVQRLDSISRSPVYAQFGEALNGVSTIHAYNAYDRIAETNGKSMDNNIRFSLVNI 352
            +ST+REV+RLDSISRSPVYAQFGEALNG+STI AY AYDR+A+ NG+SMDNNIR++LVNI
Sbjct: 1073 QSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGRSMDNNIRYTLVNI 1132

Query: 353  SANQWLSIRLQTVGALMIWLTATFAVMQNSKEKNQQAFASTMGLLLTNALSITSLLTNVL 412
            SAN+WL+IRL+T+G LMIW TATFAVMQN + +NQQ FASTMGLLL+ AL+ITSLLT VL
Sbjct: 1133 SANRWLAIRLETLGGLMIWFTATFAVMQNGRAENQQEFASTMGLLLSYALNITSLLTGVL 1192

Query: 413  KYGSIVENSLNSVERVGTYIDLASEAPSIIENNRPPSGWPSSGDIKFDSVVLRYRLELPP 472
            +  S+ ENSLNSVERVGTYIDL SEAPS+I++NRPP GWPSSG IKFD VVLRYR ELPP
Sbjct: 1193 RLASLAENSLNSVERVGTYIDLPSEAPSVIDDNRPPPGWPSSGSIKFDEVVLRYRPELPP 1252

Query: 473  VLHGISFSVLSNEKVGIVGRTGAGKSSMLNALFRIVELETGRIFIDGLNIAKFGLLDLRK 532
            VLHG+SF++  ++KVGIVGRTGAGKSSMLNALFRIVELE GRI ID  +IAKFGL DLRK
Sbjct: 1253 VLHGLSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELEKGRILIDDRDIAKFGLADLRK 1312

Query: 533  VLGVIPQSPVLFS-------DPFQEHDDDDLWEVLERVHLKDVIRRNTLGLDAEVHFISM 588
            VLG+IPQSPVLFS       DPF EH+D DLWE LER HLKDVIRRN+LGLDAEV     
Sbjct: 1313 VLGIIPQSPVLFSGTVRFNLDPFTEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGE 1372

The following BLAST results are available for this feature:

BLAST of Lsi05G008640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AB2C_ARATH	7.2e-120	71.85	ABC transporter C family member 2 OS=Arabidopsis thaliana GN=ABCC2 PE=1 SV=2	[more]
AB1C_ARATH	8.8e-118	71.19	ABC transporter C family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1	[more]
AB12C_ARATH	2.7e-111	69.49	ABC transporter C family member 12 OS=Arabidopsis thaliana GN=ABCC12 PE=2 SV=1	[more]
AB11C_ARATH	2.0e-109	67.55	ABC transporter C family member 11 OS=Arabidopsis thaliana GN=ABCC11 PE=2 SV=2	[more]
ABCCC_DICDI	9.9e-61	44.67	ABC transporter C family member 12 OS=Dictyostelium discoideum GN=abcC12 PE=3 SV...	[more]

BLAST of Lsi05G008640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A072V4U7_MEDTR	1.3e-123	76.16	Multidrug resistance protein ABC transporter family protein OS=Medicago truncatu...	[more]
A0A072VEV1_MEDTR	1.3e-123	76.16	Multidrug resistance protein ABC transporter family protein OS=Medicago truncatu...	[more]
A0A072V5R7_MEDTR	1.3e-123	76.16	Multidrug resistance protein ABC transporter family protein OS=Medicago truncatu...	[more]
A0A072V4E0_MEDTR	1.3e-123	76.16	Multidrug resistance protein ABC transporter family protein OS=Medicago truncatu...	[more]
G7IP56_MEDTR	1.3e-123	76.16	Multidrug resistance protein ABC transporter family protein OS=Medicago truncatu...	[more]

BLAST of Lsi05G008640 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G34660.1	4.0e-121	71.85	multidrug resistance-associated protein 2	[more]
AT1G30400.1	4.9e-119	71.19	multidrug resistance-associated protein 1	[more]
AT1G30410.1	1.5e-112	69.49	multidrug resistance-associated protein 13	[more]
AT1G30420.1	1.1e-110	67.55	multidrug resistance-associated protein 12	[more]
AT3G62700.1	3.9e-55	38.44	multidrug resistance-associated protein 10	[more]

BLAST of Lsi05G008640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659071520\|ref\|XP_008460280.1\|	5.3e-131	83.44	PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 2-like, partial ...	[more]
gi\|922388195\|ref\|XP_013462661.1\|	1.8e-123	76.16	multidrug resistance protein ABC transporter family protein [Medicago truncatula...	[more]
gi\|659089773\|ref\|XP_008445683.1\|	1.8e-123	76.16	PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 2-like [Cucumis ...	[more]
gi\|922388197\|ref\|XP_013462662.1\|	1.8e-123	76.16	multidrug resistance protein ABC transporter family protein [Medicago truncatula...	[more]
gi\|922388193\|ref\|XP_013462660.1\|	1.8e-123	76.16	multidrug resistance protein ABC transporter family protein [Medicago truncatula...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport
GO:0006810	transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0042626	ATPase activity, coupled to transmembrane movement of substances
GO:0016887	ATPase activity
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR011527	ABC1_TM_dom
IPR003439	ABC_transporter-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006810	transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0042626	ATPase activity, coupled to transmembrane movement of substances
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATPase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G008640.1	Lsi05G008640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003439	ABC transporter-like	PFAM	PF00005	ABC_tran	coord: 474..570 score: 3.8
IPR011527	ABC transporter type 1, transmembrane domain	PFAM	PF00664	ABC_membrane	coord: 295..392 score: 2.
IPR011527	ABC transporter type 1, transmembrane domain	PROFILE	PS50929	ABC_TM1F	coord: 296..420 score: 10
IPR011527	ABC transporter type 1, transmembrane domain	unknown	SSF90123	ABC transporter transmembrane region	coord: 295..437 score: 9.03
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 457..549 score: 2.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 448..581 score: 4.03
None	No IPR available	GENE3D	G3DSA:1.20.1560.10		coord: 295..433 score: 2.9
None	No IPR available	PANTHER	PTHR24223	FAMILY NOT NAMED	coord: 294..580 score: 6.2E
None	No IPR available	PANTHER	PTHR24223:SF251	ABC TRANSPORTER C FAMILY MEMBER 11-RELATED	coord: 294..580 score: 6.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G008640	Bhi05G000486	Wax gourd	lsiwgoB461

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G008640	Watermelon (Charleston Gray)	lsiwcgB316
Lsi05G008640	Watermelon (97103) v1	lsiwmB343
Lsi05G008640	Silver-seed gourd	carlsiB651
Lsi05G008640	Watermelon (97103) v2	lsiwmbB354
Lsi05G008640	Cucurbita maxima (Rimu)	cmalsiB581
Lsi05G008640	Cucurbita moschata (Rifu)	cmolsiB476
Lsi05G008640	Cucurbita moschata (Rifu)	cmolsiB558
Lsi05G008640	Cucurbita pepo (Zucchini)	cpelsiB216
Lsi05G008640	Cucurbita pepo (Zucchini)	cpelsiB623