Lsi05G008630 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G008630
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCysteine-rich venom protein
Locationchr05 : 14497637 .. 14498110 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCCTCCATCTTTTGGTCAAGACTCGCCTCAAGATTATGTTGATGCACACAATGATGCACGTGCTCGTGCCCGTGGTCAAGATAGCCCTATCCAAGTTGCCATCGAACCCATCCAACCCATCCAATGGGATGAGGAAGTGGCAAACTATGCTAGGCAATATGCCAACGAACGTAGTAATGATTGTCAATTGTTGCATTCCAACAATAGGACTTACGGGGAGAATCTAGCAATGCATCCTGCTGAAATGTCTGGCATCGAGGCAGTTGAAATGTGGGTGAATGAGCAACAATTCTACAATTATGACTCCAATACATGCGCTGATCAAGAAATGTGTGGCCACTACACTCAAGTTGTGTGGAATAACTCAACAAAAGTTGGATGTGCAAAAGTGAGGTGCAACAATGACGGTACATTCATTACCTGCAACTATTACCCACCAGGAAATATTATTGGCGAGCGACCATATTAA

mRNA sequence

ATGCTTCCTCCATCTTTTGGTCAAGACTCGCCTCAAGATTATGTTGATGCACACAATGATGCACGTGCTCGTGCCCGTGGTCAAGATAGCCCTATCCAAGTTGCCATCGAACCCATCCAACCCATCCAATGGGATGAGGAAGTGGCAAACTATGCTAGGCAATATGCCAACGAACGTAGTAATGATTGTCAATTGTTGCATTCCAACAATAGGACTTACGGGGAGAATCTAGCAATGCATCCTGCTGAAATGTCTGGCATCGAGGCAGTTGAAATGTGGGTGAATGAGCAACAATTCTACAATTATGACTCCAATACATGCGCTGATCAAGAAATGTGTGGCCACTACACTCAAGTTGTGTGGAATAACTCAACAAAAGTTGGATGTGCAAAAGTGAGGTGCAACAATGACGGTACATTCATTACCTGCAACTATTACCCACCAGGAAATATTATTGGCGAGCGACCATATTAA

Coding sequence (CDS)

ATGCTTCCTCCATCTTTTGGTCAAGACTCGCCTCAAGATTATGTTGATGCACACAATGATGCACGTGCTCGTGCCCGTGGTCAAGATAGCCCTATCCAAGTTGCCATCGAACCCATCCAACCCATCCAATGGGATGAGGAAGTGGCAAACTATGCTAGGCAATATGCCAACGAACGTAGTAATGATTGTCAATTGTTGCATTCCAACAATAGGACTTACGGGGAGAATCTAGCAATGCATCCTGCTGAAATGTCTGGCATCGAGGCAGTTGAAATGTGGGTGAATGAGCAACAATTCTACAATTATGACTCCAATACATGCGCTGATCAAGAAATGTGTGGCCACTACACTCAAGTTGTGTGGAATAACTCAACAAAAGTTGGATGTGCAAAAGTGAGGTGCAACAATGACGGTACATTCATTACCTGCAACTATTACCCACCAGGAAATATTATTGGCGAGCGACCATATTAA

Protein sequence

MLPPSFGQDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERSNDCQLLHSNNRTYGENLAMHPAEMSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVVWNNSTKVGCAKVRCNNDGTFITCNYYPPGNIIGERPY
Homology
[Close]
BLAST of Lsi05G008630 vs. Swiss-Prot
Match: PR1_SAMNI (Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-44
Identity = 85/158 (53.80%), Postives = 107/158 (67.72%), Query Frame = 1 

Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERS 60
           M+  S  Q+SPQDYVDAHN AR+               + P+ WDE VA +ARQYA  R+
Sbjct: 22  MVQYSVAQNSPQDYVDAHNAARSAVN------------VGPVTWDESVAAFARQYAQSRA 81

Query: 61  NDCQLLHSNNRTYGENLAMHPA-EMSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQV 120
            DC+L+HS +  YGENLA     E++G  AV+MWV E+  YN ++NTCA  ++CGHYTQV
Sbjct: 82  GDCRLVHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQV 141

Query: 121 VWNNSTKVGCAKVRCNNDGTFITCNYYPPGNIIGERPY 158
           VW NS ++GCA+VRCNN   FITCNY PPGN  G+RPY
Sbjct: 142 VWRNSVRIGCARVRCNNGAWFITCNYSPPGNYAGQRPY 167

[Close]
BLAST of Lsi05G008630 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.2e-43
Identity = 83/157 (52.87%), Postives = 106/157 (67.52%), Query Frame = 1 

Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERS 60
           ++ P   QDS QDYV+AHN AR++              + P+QWDE +A YAR YAN+  
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIG------------VGPMQWDEGLAAYARNYANQLK 79

Query: 61  NDCQLLHSNNRTYGENLAMHPAEMSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVV 120
            DC+L+HS    YGENLA    ++SG+ AV +WVNE+  YNYD+NTC    +CGHYTQVV
Sbjct: 80  GDCRLVHSRG-PYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVV 139

Query: 121 WNNSTKVGCAKVRCNNDGTFITCNYYPPGNIIGERPY 158
           W NS ++GCAKVRCNN GT I+CNY PPGN   ++PY
Sbjct: 140 WRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]
BLAST of Lsi05G008630 vs. Swiss-Prot
Match: PR1C_TOBAC (Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3)

HSP 1 Score: 172.9 bits (437), Expect = 2.7e-42
Identity = 79/151 (52.32%), Postives = 109/151 (72.19%), Query Frame = 1 

Query: 8   QDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERSNDCQLLH 67
           Q+S QDY+DAHN ARA               ++P+ WD++VA YA+ YA++ + DC L+H
Sbjct: 31  QNSQQDYLDAHNTARADVG------------VEPLTWDDQVAAYAQNYASQLAADCNLVH 90

Query: 68  SNNRTYGENLAMHPAE-MSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVVWNNSTK 127
           S+ + YGENLA    + ++  +AVEMWVNE+Q+Y +DSNTCA  ++CGHYTQVVW NS +
Sbjct: 91  SHGQ-YGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQVVWRNSVR 150

Query: 128 VGCAKVRCNNDGTFITCNYYPPGNIIGERPY 158
           VGCA+V+CNN G  ++CNY PPGN+IG+ PY
Sbjct: 151 VGCARVQCNNGGYIVSCNYDPPGNVIGKSPY 168

[Close]
BLAST of Lsi05G008630 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.8e-42
Identity = 79/154 (51.30%), Postives = 108/154 (70.13%), Query Frame = 1 

Query: 5   SFGQDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERSNDCQ 64
           S  Q+S QDY+DAHN ARA               ++P+ WD  VA YA+ Y ++ + DC 
Sbjct: 28  SHAQNSQQDYLDAHNTARADVG------------VEPLTWDNGVAAYAQNYVSQLAADCN 87

Query: 65  LLHSNNRTYGENLAMHPAE-MSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVVWNN 124
           L+HS+ + YGENLA    + M+  +AVEMWV+E+Q+Y++DSNTCA  ++CGHYTQVVW N
Sbjct: 88  LVHSHGQ-YGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRN 147

Query: 125 STKVGCAKVRCNNDGTFITCNYYPPGNIIGERPY 158
           S +VGCA+V+CNN G  ++CNY PPGN+IG+ PY
Sbjct: 148 SVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]
BLAST of Lsi05G008630 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-41
Identity = 79/151 (52.32%), Postives = 108/151 (71.52%), Query Frame = 1 

Query: 8   QDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERSNDCQLLH 67
           Q+S QDY+DAHN ARA               ++P+ WD++VA YA+ YA++ + DC L+H
Sbjct: 31  QNSQQDYLDAHNTARADVG------------VEPLTWDDQVAAYAQNYASQLAADCNLVH 90

Query: 68  SNNRTYGENLAMHPAE-MSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVVWNNSTK 127
           S+ + YGENLA    + M+  +AVEMWV+E+Q+Y++DSNTCA  ++CGHYTQVVW NS +
Sbjct: 91  SHGQ-YGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVR 150

Query: 128 VGCAKVRCNNDGTFITCNYYPPGNIIGERPY 158
           VGCA+V+CNN G  ++CNY PPGN  GE PY
Sbjct: 151 VGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]
BLAST of Lsi05G008630 vs. TrEMBL
Match: A0A0A0K6A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.6e-49
Identity = 94/158 (59.49%), Postives = 116/158 (73.42%), Query Frame = 1 

Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERS 60
           MLP S  QDSPQD++DAHN ARA+            + ++P+QWDE VA++A QYAN+R 
Sbjct: 20  MLPSSLAQDSPQDFLDAHNTARAQ------------DGVEPVQWDETVASFALQYANQRI 79

Query: 61  NDCQLLHSNNRTYGENLAMHPAEMSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVV 120
           NDC L+HS    YGEN+A    ++SG  AVEMWVNE++FY+Y SNTCA   +CGHYTQVV
Sbjct: 80  NDCSLVHSGG-PYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVV 139

Query: 121 WNNSTKVGCAKVRC-NNDGTFITCNYYPPGNIIGERPY 158
           W NS ++GCAKV C NN GTFITCNY PPGN +G+RPY
Sbjct: 140 WRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]
BLAST of Lsi05G008630 vs. TrEMBL
Match: A0A0A0K2V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.5e-47
Identity = 91/158 (57.59%), Postives = 117/158 (74.05%), Query Frame = 1 

Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERS 60
           MLP S  QDSPQDYV++HN ARA               + PI+WDE+VANY+R YAN+R 
Sbjct: 19  MLPSSLAQDSPQDYVNSHNHARAAVG------------VGPIKWDEKVANYSRYYANKRM 78

Query: 61  NDCQLLHSNNRTYGENLAMHPAEMSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVV 120
           NDC+L+HSN   YGEN+A    ++SGI AV++WV+E+Q+YNY+SN+CA  ++CGHYTQVV
Sbjct: 79  NDCRLVHSNG-PYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGHYTQVV 138

Query: 121 WNNSTKVGCAKVRC-NNDGTFITCNYYPPGNIIGERPY 158
           W NS ++GCAKV+C N  G FI CNY P GNI+G+RPY
Sbjct: 139 WKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

[Close]
BLAST of Lsi05G008630 vs. TrEMBL
Match: M5VJ82_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa1027191mg PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.6e-46
Identity = 89/157 (56.69%), Postives = 110/157 (70.06%), Query Frame = 1 

Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERS 60
           +L  +  QD+PQDYV AHN+ARA               + P+ WDE++  YA+ YAN+  
Sbjct: 18  LLQSTHAQDTPQDYVTAHNNARAAVN------------VGPLSWDEKLQGYAQDYANQHI 77

Query: 61  NDCQLLHSNNRTYGENLAMHPAEMSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVV 120
            DC L+HS    YGENLAM  A++SG +AV MWV E+  YNYDSNTCAD +MCGHYTQVV
Sbjct: 78  GDCNLVHSGG-PYGENLAMSTADLSGTDAVNMWVAEKADYNYDSNTCADGKMCGHYTQVV 137

Query: 121 WNNSTKVGCAKVRCNNDGTFITCNYYPPGNIIGERPY 158
           W N+ +VGCAKVRCN+ GTFI CNY PPGN +GE+PY
Sbjct: 138 WRNTARVGCAKVRCNSGGTFIGCNYDPPGNYVGEKPY 161

[Close]
BLAST of Lsi05G008630 vs. TrEMBL
Match: V4MET1_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10026438mg PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-45
Identity = 89/150 (59.33%), Postives = 106/150 (70.67%), Query Frame = 1 

Query: 8   QDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERSNDCQLLH 67
           QDSPQDY+DAHN ARA               + P++WDE VA YAR YAN+R  DC L H
Sbjct: 27  QDSPQDYLDAHNKARAAVG------------VGPLRWDERVAAYARDYANQRRGDCALQH 86

Query: 68  SNNRTYGENLAMHPAEMSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVVWNNSTKV 127
           S+   YGEN+A    +MSG++A+ MWVNE+  YNY SNTCA  ++CGHYTQVVW NS ++
Sbjct: 87  SSG-PYGENIAWSSGDMSGVQAINMWVNEKVDYNYGSNTCASGKVCGHYTQVVWRNSVRM 146

Query: 128 GCAKVRCNNDGTFITCNYYPPGNIIGERPY 158
           GCAKVRCNN  TFITCNY PPGN IG+ PY
Sbjct: 147 GCAKVRCNNGQTFITCNYDPPGNFIGQWPY 163

[Close]
BLAST of Lsi05G008630 vs. TrEMBL
Match: A0A0U2NUS6_HEVBR (Pathogenesis-related protein 1 OS=Hevea brasiliensis GN=PR-1 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-45
Identity = 84/154 (54.55%), Postives = 112/154 (72.73%), Query Frame = 1 

Query: 4   PSFGQDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERSNDC 63
           P   QDSPQDY++AHN ARA               + P+ WD +VA +A+ YA++R+ DC
Sbjct: 22  PLNAQDSPQDYLNAHNQARAAVG------------VGPMTWDNKVAAFAQNYASQRAGDC 81

Query: 64  QLLHSNNRTYGENLAMHPAEMSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVVWNN 123
            L+HS+NR YGENLA    ++SG +AV++WV+E+ FY+Y+SN+CA  + CGHYTQVVW N
Sbjct: 82  NLVHSSNRPYGENLAKSSGDLSGKDAVKLWVDEKAFYDYNSNSCAAGKQCGHYTQVVWRN 141

Query: 124 STKVGCAKVRCNNDGTFITCNYYPPGNIIGERPY 158
           S ++GCAKV+CNN GTFI CNY PPGN +G+RPY
Sbjct: 142 SVRLGCAKVKCNNGGTFIGCNYDPPGNFVGQRPY 163

[Close]
BLAST of Lsi05G008630 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 181.8 bits (460), Expect = 3.3e-46
Identity = 85/150 (56.67%), Postives = 105/150 (70.00%), Query Frame = 1 

Query: 8   QDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERSNDCQLLH 67
           QDSPQD++  HN ARA               + P++WDE+VA YAR YAN+R  DC + H
Sbjct: 27  QDSPQDFLAVHNRARAEVG------------VGPLRWDEKVAAYARNYANQRKGDCAMKH 86

Query: 68  SNNRTYGENLAMHPAEMSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVVWNNSTKV 127
           S+  +YGEN+A     M+G+ AV+MWV+EQ  Y+YDSNTCA  + CGHYTQVVW NS ++
Sbjct: 87  SSG-SYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERL 146

Query: 128 GCAKVRCNNDGTFITCNYYPPGNIIGERPY 158
           GCAKVRCNN  TFITCNY PPGN +GE PY
Sbjct: 147 GCAKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]
BLAST of Lsi05G008630 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 175.6 bits (444), Expect = 2.3e-44
Identity = 83/157 (52.87%), Postives = 106/157 (67.52%), Query Frame = 1 

Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERS 60
           ++ P   QDS QDYV+AHN AR++              + P+QWDE +A YAR YAN+  
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIG------------VGPMQWDEGLAAYARNYANQLK 79

Query: 61  NDCQLLHSNNRTYGENLAMHPAEMSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVV 120
            DC+L+HS    YGENLA    ++SG+ AV +WVNE+  YNYD+NTC    +CGHYTQVV
Sbjct: 80  GDCRLVHSRG-PYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVV 139

Query: 121 WNNSTKVGCAKVRCNNDGTFITCNYYPPGNIIGERPY 158
           W NS ++GCAKVRCNN GT I+CNY PPGN   ++PY
Sbjct: 140 WRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]
BLAST of Lsi05G008630 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 174.5 bits (441), Expect = 5.2e-44
Identity = 82/155 (52.90%), Postives = 105/155 (67.74%), Query Frame = 1 

Query: 5   SFGQDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERSNDCQ 64
           S  +D  Q +++AHN+AR                + P+ WD+EVA YA  YAN+R NDC 
Sbjct: 20  SLAEDLQQQFLEAHNEARNEVG------------LDPLVWDDEVAAYAASYANQRINDCA 79

Query: 65  LLHSNNRTYGENLAMHPAEMSGIEAVEMWVNEQQFYNYDSNTCADQE--MCGHYTQVVWN 124
           L+HSN   +GEN+AM   EMS  +A EMW+NE+Q+Y+YDSNTC D     C HYTQVVW 
Sbjct: 80  LVHSNG-PFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWK 139

Query: 125 NSTKVGCAKVRCNNDGTFITCNYYPPGNIIGERPY 158
           N+ ++GCAKV CN+ GTFITCNY PPGN IGE+P+
Sbjct: 140 NTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

[Close]
BLAST of Lsi05G008630 vs. TAIR10
Match: AT5G26130.1 (AT5G26130.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 169.1 bits (427), Expect = 2.2e-42
Identity = 81/155 (52.26%), Postives = 96/155 (61.94%), Query Frame = 1 

Query: 4   PSFGQDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERSNDC 63
           P   QD PQDY+D HN AR +              + P++W      YA  YA +R  DC
Sbjct: 24  PLKAQDQPQDYLDEHNRARTQVG------------VPPMKWHAGAEQYAWNYAQQRKGDC 83

Query: 64  QLLHSN-NRTYGENLAMHPAEMSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVVWN 123
            L HSN N  YGENLA     +SG EAV++WVNE+  Y Y SNTC+D + CGHYTQVVW 
Sbjct: 84  SLTHSNSNGLYGENLAWSGGALSGAEAVKLWVNEKSDYIYASNTCSDGKQCGHYTQVVWR 143

Query: 124 NSTKVGCAKVRCNNDGTFITCNYYPPGNIIGERPY 158
            S  VGCAKV+C+N GTF+TCNYYPPGN  G  PY
Sbjct: 144 TSEWVGCAKVKCDNGGTFVTCNYYPPGNYRGRWPY 166

[Close]
BLAST of Lsi05G008630 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-41
Identity = 80/154 (51.95%), Postives = 99/154 (64.29%), Query Frame = 1 

Query: 4   PSFGQDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERSNDC 63
           PS  QDSPQDY+  HN AR                + P+QWDE VA YAR YA +   +C
Sbjct: 23  PSKAQDSPQDYLRVHNQARGAVG------------VGPMQWDERVAAYARSYAEQLRGNC 82

Query: 64  QLLHSNNRTYGENLAMHPAEMSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVVWNN 123
           +L+HS    YGENLA    ++SG+ AV MWV+E+  YNY +NTC    +CGHYTQVVW  
Sbjct: 83  RLIHSGG-PYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRK 142

Query: 124 STKVGCAKVRCNNDGTFITCNYYPPGNIIGERPY 158
           S ++GCAKVRCNN GT I+CNY P GN + E+PY
Sbjct: 143 SVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]
BLAST of Lsi05G008630 vs. NCBI nr
Match: gi|778724783|ref|XP_011658861.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 6.6e-49
Identity = 94/158 (59.49%), Postives = 116/158 (73.42%), Query Frame = 1 

Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERS 60
           MLP S  QDSPQD++DAHN ARA+            + ++P+QWDE VA++A QYAN+R 
Sbjct: 20  MLPSSLAQDSPQDFLDAHNTARAQ------------DGVEPVQWDETVASFALQYANQRI 79

Query: 61  NDCQLLHSNNRTYGENLAMHPAEMSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVV 120
           NDC L+HS    YGEN+A    ++SG  AVEMWVNE++FY+Y SNTCA   +CGHYTQVV
Sbjct: 80  NDCSLVHSGG-PYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVV 139

Query: 121 WNNSTKVGCAKVRC-NNDGTFITCNYYPPGNIIGERPY 158
           W NS ++GCAKV C NN GTFITCNY PPGN +G+RPY
Sbjct: 140 WRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]
BLAST of Lsi05G008630 vs. NCBI nr
Match: gi|659110129|ref|XP_008455064.1| (PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo])

HSP 1 Score: 198.7 bits (504), Expect = 7.3e-48
Identity = 94/158 (59.49%), Postives = 116/158 (73.42%), Query Frame = 1 

Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERS 60
           MLP S  QDSP+D+V+AHN ARA+              + P+ WDE VA++ARQYAN+R 
Sbjct: 20  MLPSSLAQDSPRDFVNAHNAARAQVG------------VGPVHWDERVASFARQYANQRI 79

Query: 61  NDCQLLHSNNRTYGENLAMHPAEMSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVV 120
           NDC+L+HS    YGEN+A    ++SG  AV+MWVNE+QFYNY SNTCA  ++CGHYTQVV
Sbjct: 80  NDCRLVHSGG-PYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVV 139

Query: 121 WNNSTKVGCAKVRC-NNDGTFITCNYYPPGNIIGERPY 158
           W NS ++GCAKVRC NN GTFI CNY P GNIIG++PY
Sbjct: 140 WRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]
BLAST of Lsi05G008630 vs. NCBI nr
Match: gi|778724786|ref|XP_004136929.2| (PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 196.4 bits (498), Expect = 3.6e-47
Identity = 91/158 (57.59%), Postives = 117/158 (74.05%), Query Frame = 1 

Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERS 60
           MLP S  QDSPQDYV++HN ARA               + PI+WDE+VANY+R YAN+R 
Sbjct: 19  MLPSSLAQDSPQDYVNSHNHARAAVG------------VGPIKWDEKVANYSRYYANKRM 78

Query: 61  NDCQLLHSNNRTYGENLAMHPAEMSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVV 120
           NDC+L+HSN   YGEN+A    ++SGI AV++WV+E+Q+YNY+SN+CA  ++CGHYTQVV
Sbjct: 79  NDCRLVHSNG-PYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGHYTQVV 138

Query: 121 WNNSTKVGCAKVRC-NNDGTFITCNYYPPGNIIGERPY 158
           W NS ++GCAKV+C N  G FI CNY P GNI+G+RPY
Sbjct: 139 WKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

[Close]
BLAST of Lsi05G008630 vs. NCBI nr
Match: gi|659110127|ref|XP_008455062.1| (PREDICTED: pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 195.7 bits (496), Expect = 6.2e-47
Identity = 90/158 (56.96%), Postives = 117/158 (74.05%), Query Frame = 1 

Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERS 60
           MLP S  QDSPQDY++ HN ARA  R            ++ IQWDE+VANY+RQYAN R 
Sbjct: 19  MLPSSLAQDSPQDYLNGHNQARAAVR------------VRLIQWDEKVANYSRQYANLRM 78

Query: 61  NDCQLLHSNNRTYGENLAMHPAEMSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVV 120
           NDC+L+HSN   YGEN+A    ++SG +AV++WVNE+Q+Y+Y++N+CA  ++CGHYTQVV
Sbjct: 79  NDCRLVHSNG-PYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGHYTQVV 138

Query: 121 WNNSTKVGCAKVRC-NNDGTFITCNYYPPGNIIGERPY 158
           W NS ++GCAKV+C N  G FI CNY P GNI+G+RPY
Sbjct: 139 WKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 163

[Close]
BLAST of Lsi05G008630 vs. NCBI nr
Match: gi|595792413|ref|XP_007199955.1| (hypothetical protein PRUPE_ppa1027191mg [Prunus persica])

HSP 1 Score: 193.7 bits (491), Expect = 2.4e-46
Identity = 89/157 (56.69%), Postives = 110/157 (70.06%), Query Frame = 1 

Query: 1   MLPPSFGQDSPQDYVDAHNDARARARGQDSPIQVAIEPIQPIQWDEEVANYARQYANERS 60
           +L  +  QD+PQDYV AHN+ARA               + P+ WDE++  YA+ YAN+  
Sbjct: 18  LLQSTHAQDTPQDYVTAHNNARAAVN------------VGPLSWDEKLQGYAQDYANQHI 77

Query: 61  NDCQLLHSNNRTYGENLAMHPAEMSGIEAVEMWVNEQQFYNYDSNTCADQEMCGHYTQVV 120
            DC L+HS    YGENLAM  A++SG +AV MWV E+  YNYDSNTCAD +MCGHYTQVV
Sbjct: 78  GDCNLVHSGG-PYGENLAMSTADLSGTDAVNMWVAEKADYNYDSNTCADGKMCGHYTQVV 137

Query: 121 WNNSTKVGCAKVRCNNDGTFITCNYYPPGNIIGERPY 158
           W N+ +VGCAKVRCN+ GTFI CNY PPGN +GE+PY
Sbjct: 138 WRNTARVGCAKVRCNSGGTFIGCNYDPPGNYVGEKPY 161

The following BLAST results are available for this feature:
BLAST of Lsi05G008630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PR1_SAMNI1.7e-4453.80Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1[more]
PRB1_ARATH4.2e-4352.87Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1[more]
PR1C_TOBAC2.7e-4252.32Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3[more]
PR1B_TOBAC7.8e-4251.30Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1[more]
PR1A_TOBAC2.3e-4152.32Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1[more]
BLAST of Lsi05G008630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6A4_CUCSA4.6e-4959.49Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1[more]
A0A0A0K2V9_CUCSA2.5e-4757.59Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1[more]
M5VJ82_PRUPE1.6e-4656.69Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa1027191mg PE=3 SV=1[more]
V4MET1_EUTSA1.1e-4559.33Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10026438mg PE=3 SV=1[more]
A0A0U2NUS6_HEVBR1.4e-4554.55Pathogenesis-related protein 1 OS=Hevea brasiliensis GN=PR-1 PE=2 SV=1[more]
BLAST of Lsi05G008630 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33720.13.3e-4656.67 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT2G14580.12.3e-4452.87 basic pathogenesis-related protein 1[more]
AT3G19690.15.2e-4452.90 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT5G26130.12.2e-4252.26 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT2G14610.11.1e-4151.95 pathogenesis-related gene 1[more]
BLAST of Lsi05G008630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778724783|ref|XP_011658861.1|6.6e-4959.49PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus][more]
gi|659110129|ref|XP_008455064.1|7.3e-4859.49PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo][more]
gi|778724786|ref|XP_004136929.2|3.6e-4757.59PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus][more]
gi|659110127|ref|XP_008455062.1|6.2e-4756.96PREDICTED: pathogenesis-related protein 1-like [Cucumis melo][more]
gi|595792413|ref|XP_007199955.1|2.4e-4656.69hypothetical protein PRUPE_ppa1027191mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: INTERPRO
TermDefinition
IPR018244Allrgn_V5/Tpx1_CS
IPR014044CAP_domain
IPR001283Allrgn_V5/Tpx1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G008630.1Lsi05G008630.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 89..102
score: 9.0E-20coord: 140..153
score: 9.0E-20coord: 113..129
score: 9.0E-20coord: 42..60
score: 9.0
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 1..157
score: 1.6
IPR014044CAP domainGENE3DG3DSA:3.40.33.10coord: 5..157
score: 2.9
IPR014044CAP domainPFAMPF00188CAPcoord: 15..145
score: 6.8
IPR014044CAP domainSMARTSM00198SCP_3coord: 9..153
score: 6.5
IPR014044CAP domainunknownSSF55797PR-1-likecoord: 6..157
score: 5.89
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 114..124
scor
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 140..151
scor
NoneNo IPR availablePANTHERPTHR10334:SF223F2J10.6 PROTEIN-RELATEDcoord: 1..157
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G008630Watermelon (97103) v2lsiwmbB354
Lsi05G008630Wax gourdlsiwgoB461
Lsi05G008630Cucurbita maxima (Rimu)cmalsiB581
Lsi05G008630Cucurbita moschata (Rifu)cmolsiB476
Lsi05G008630Cucurbita moschata (Rifu)cmolsiB558
Lsi05G008630Cucurbita pepo (Zucchini)cpelsiB216
Lsi05G008630Cucurbita pepo (Zucchini)cpelsiB623
Lsi05G008630Watermelon (Charleston Gray)lsiwcgB316
Lsi05G008630Watermelon (97103) v1lsiwmB343
Lsi05G008630Silver-seed gourdcarlsiB651