Lsi05G008370 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G008370
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPhloem filament protein
Locationchr05 : 13665720 .. 13666343 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTGTGAGACAATCGGTGAGTGGGTCCCAGTCCCTGATACATCAACGCCTTGTGTGAAAGAAATTGTGAACGACGCAGTGAAGAAACACAACGAAGAAATTATAGCAACAGGTGGTAATAGTGGTGATCTTCTTACACTAAATAAAATTATATCAGGAACAATTAAGGAGATTGATGATAATACAACAGAGCATAAGTTTTATATTGAAGCAACAAATGGTAATGGAGTTGTCGGTACATATGAACCACATGTATTGGTTGAGGAAAAGGATGGGACAAGAGTGAGAACACTCCTTTCTTTCCCACAAGGCTACAAGGATGAGAAAGGTCAATTTTGGATTAGAATTCCTGACGTTGACGAGTCTTGTGTTCAAGATGTTTCAAAGTGGGCGGTGGAACAACATAACAAGGACGCTAATGATAATCTCATATATGTTTCCACTCTTGAGGGTTATTATTATGAGGTCAATCCACATGCTATAAGGTTTATTCTCCATATTAAGGCAAAGGATTGTTTTGGACGTTGGCGAATCTACATAGCTATTGTGCTTGAAGAAAAACCTCTTACTGAGAAAATTCGAACACTTGAATTTTTCAAACCTATTCCAAGGAAAAGTTGA

mRNA sequence

ATGAGTTGTGAGACAATCGGTGAGTGGGTCCCAGTCCCTGATACATCAACGCCTTGTGTGAAAGAAATTGTGAACGACGCAGTGAAGAAACACAACGAAGAAATTATAGCAACAGGTGGTAATAGTGGTGATCTTCTTACACTAAATAAAATTATATCAGGAACAATTAAGGAGATTGATGATAATACAACAGAGCATAAGTTTTATATTGAAGCAACAAATGGTAATGGAGTTGTCGGTACATATGAACCACATGTATTGGTTGAGGAAAAGGATGGGACAAGAGTGAGAACACTCCTTTCTTTCCCACAAGGCTACAAGGATGAGAAAGGTCAATTTTGGATTAGAATTCCTGACGTTGACGAGTCTTGTGTTCAAGATGTTTCAAAGTGGGCGGTGGAACAACATAACAAGGACGCTAATGATAATCTCATATATGTTTCCACTCTTGAGGGTTATTATTATGAGGTCAATCCACATGCTATAAGGTTTATTCTCCATATTAAGGCAAAGGATTGTTTTGGACGTTGGCGAATCTACATAGCTATTGTGCTTGAAGAAAAACCTCTTACTGAGAAAATTCGAACACTTGAATTTTTCAAACCTATTCCAAGGAAAAGTTGA

Coding sequence (CDS)

ATGAGTTGTGAGACAATCGGTGAGTGGGTCCCAGTCCCTGATACATCAACGCCTTGTGTGAAAGAAATTGTGAACGACGCAGTGAAGAAACACAACGAAGAAATTATAGCAACAGGTGGTAATAGTGGTGATCTTCTTACACTAAATAAAATTATATCAGGAACAATTAAGGAGATTGATGATAATACAACAGAGCATAAGTTTTATATTGAAGCAACAAATGGTAATGGAGTTGTCGGTACATATGAACCACATGTATTGGTTGAGGAAAAGGATGGGACAAGAGTGAGAACACTCCTTTCTTTCCCACAAGGCTACAAGGATGAGAAAGGTCAATTTTGGATTAGAATTCCTGACGTTGACGAGTCTTGTGTTCAAGATGTTTCAAAGTGGGCGGTGGAACAACATAACAAGGACGCTAATGATAATCTCATATATGTTTCCACTCTTGAGGGTTATTATTATGAGGTCAATCCACATGCTATAAGGTTTATTCTCCATATTAAGGCAAAGGATTGTTTTGGACGTTGGCGAATCTACATAGCTATTGTGCTTGAAGAAAAACCTCTTACTGAGAAAATTCGAACACTTGAATTTTTCAAACCTATTCCAAGGAAAAGTTGA

Protein sequence

MSCETIGEWVPVPDTSTPCVKEIVNDAVKKHNEEIIATGGNSGDLLTLNKIISGTIKEIDDNTTEHKFYIEATNGNGVVGTYEPHVLVEEKDGTRVRTLLSFPQGYKDEKGQFWIRIPDVDESCVQDVSKWAVEQHNKDANDNLIYVSTLEGYYYEVNPHAIRFILHIKAKDCFGRWRIYIAIVLEEKPLTEKIRTLEFFKPIPRKS
Homology
[Close]
BLAST of Lsi05G008370 vs. TrEMBL
Match: A0A0A0K3W6_CUCSA (Phloem filament protein OS=Cucumis sativus GN=Csa_7G222880 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.5e-52
Identity = 111/209 (53.11%), Postives = 140/209 (66.99%), Query Frame = 1 

Query: 1   MSCETIGEWVPVPDTSTPCVKEIVNDAVKKHNEEIIATGGNSGDLLTLNKIISGTIKEID 60
           MSC++   W+ +PD +TPCV E+  D V +HN+        SGD L   ++I G   EID
Sbjct: 1   MSCDSKKTWIKIPDCTTPCVNEVAKDGVNQHNKA-------SGDSLVYKRVIVGWFWEID 60

Query: 61  DNTTEHKFYIEATNGNGVVGTYEPHVLVEEKDGTRVRTLLSFPQGYKDEKGQ--FWIRIP 120
           D+  +H+  IE     GVV  YE  ++V +KDG RVRTL+SF  GY DEK    FWI+IP
Sbjct: 61  DHAIKHRLIIEVVTSKGVVLIYELIIVVVQKDGKRVRTLISFLPGYLDEKNPLIFWIKIP 120

Query: 121 DVDESCVQDVSKWAVEQHNKDANDNLIYVSTLEGYYYEVNPHAIRFILHIKAKDCFGRWR 180
           DV +SCVQD +KWAV +HNK  +D L Y ST+EG+Y+EVNP  I F LHIKAK+C GR R
Sbjct: 121 DVKKSCVQDCAKWAVTEHNKITHDYLAYDSTVEGWYHEVNPFVIIFKLHIKAKECIGRVR 180

Query: 181 IYIAIVLEEKPLTEKIRTLEFFKPI-PRK 207
            YIA+V EEKPLTEKI+ LE F  I P+K
Sbjct: 181 DYIAVVKEEKPLTEKIKKLEDFYLIRPKK 202

[Close]
BLAST of Lsi05G008370 vs. TrEMBL
Match: A0A0A0LYF4_CUCSA (Phloem filament protein OS=Cucumis sativus GN=Csa_1G710160 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.3e-43
Identity = 101/207 (48.79%), Postives = 135/207 (65.22%), Query Frame = 1 

Query: 1   MSCETIGEWVPVPDTSTPCVKEIVNDAVKKHNEEIIATGGNSGDLLTLNKIISGTIKEID 60
           MSC   GEW  +P  +TPCV +I N AV +HN+E       +G+ LTL  +I G   E+ 
Sbjct: 1   MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKE-------TGEKLTLKSVIKGWFLELG 60

Query: 61  DNTTEHKFYIEATNGNGVVGTYEPHVLVEE-KDGTRVRTLLSFPQGYKDEKGQFWIRIPD 120
           D   + + YI A N  GVV TYE  V V E  D  RV+ LLSF  GY DEK  FWI I D
Sbjct: 61  DVKLKFRLYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKDVFWIVIVD 120

Query: 121 VDESCVQDVSKWAVEQHNKDANDNLIYVSTLEGYYYEVNPH-AIRFILHIKAKDCFGRWR 180
              SCVQDV+K+AV +HN+D +D+L+Y+S  +G+Y E++P+ AI F +H+  KDCFGR R
Sbjct: 121 TKASCVQDVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVR 180

Query: 181 IYIAIVLEEKPLTEKIRTLEFFKPIPR 206
            + A+VLE+KP  EKIRTL++F+ I +
Sbjct: 181 EFKALVLEDKPQKEKIRTLKYFEVIKK 200

[Close]
BLAST of Lsi05G008370 vs. TrEMBL
Match: P94012_CUCMA (Phloem filament protein OS=Cucurbita maxima GN=PP1 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-21
Identity = 72/207 (34.78%), Postives = 111/207 (53.62%), Query Frame = 1 

Query: 6   IGEWVPVPDTSTPCVKEIVNDAVKKHNEEIIATGGNSGDLLTLNKIISGTIKEIDDNTTE 65
           + +W+ +PD S  CV+E+   AV++ N +        G  L  + I  G   E+  N  +
Sbjct: 14  VEKWIKIPDVSGHCVQEVAKLAVEQFNVQ-------HGHSLKYDSIHEGWYCELGQNNLK 73

Query: 66  HKFYIEATNGNGVVGTYEPHVLVEEKDGTRVRTLLSFPQGYKDEKGQF-----------W 125
           ++ +I A +       YE  V  E+    R+R L+SF   Y    G +           W
Sbjct: 74  YRLHIRAIDFLQRSLLYEALVFEEKPKLERIRKLISFL--YLLNGGHYVGPVDPPQVEKW 133

Query: 126 IRIPDVDESCVQDVSKWAVEQHNKDANDNLIYVSTLEGYYYEVNPHAIRFILHIKAKDCF 185
           I+IPD+    VQ+VSK+A++++NK   + L YV   +G+Y E+    I+F LH+KAKDC 
Sbjct: 134 IKIPDLRVPFVQEVSKFAIDEYNK-GGEGLKYVEIYDGWYAEMGQDNIKFRLHVKAKDCL 193

Query: 186 GRWRIYIAIVLEEKPLTEKIRTLEFFK 202
           GR R Y AIVL ++ L++KI+ LE FK
Sbjct: 194 GRLRNYEAIVLVKQFLSKKIKILESFK 210

[Close]
BLAST of Lsi05G008370 vs. TrEMBL
Match: Q7DMD5_CUCMA (Phloem filament protein (Fragment) OS=Cucurbita maxima GN=cPC7 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.4e-15
Identity = 58/185 (31.35%), Postives = 97/185 (52.43%), Query Frame = 1 

Query: 8   EWVPVPDTSTPCVKEIVNDAVKKHNEEIIATGGNSGDLLTLNKIISGTIKEIDDNTTEHK 67
           +W+ +P+   P V+E+   AV +HN+        +GD L   ++  G   ++  +  + +
Sbjct: 126 KWIKIPNVQVPLVQELAKFAVDEHNK--------NGDGLKYIEVYEGWFMDLGHDNIKFR 185

Query: 68  FYIEATNGNGVVGTYEPHVLVEEKDGTRVRTLLSF----PQGYKDEKGQFWIRIPDVDES 127
            +++A +  G +  YE  VLVE     R++ L SF    P  ++ +    WI+IP++ E 
Sbjct: 186 LHLKAKDWLGRIRNYEAVVLVEHFWSKRIKILESFKFCGPLVFEPK----WIQIPNLKEP 245

Query: 128 CVQDVSKWAVEQHNKDANDNLIYVSTLEGYYYEVNPHAIRFILHIKAKDCFGRWRIYIAI 187
             Q V  + VEQ      D L + S  EG+Y+E+ P +++F LHIKA D  GR   Y  I
Sbjct: 246 GFQVVINFIVEQLKIILGDCLKFHSIYEGWYFELCPISLKFRLHIKAIDFLGRCLNYEII 298

Query: 188 VLEEK 189
           ++EEK
Sbjct: 306 IIEEK 298

[Close]
BLAST of Lsi05G008370 vs. TrEMBL
Match: A0A0A0K7B3_CUCSA (Phloem filament protein OS=Cucumis sativus GN=Csa_7G222870 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.5e-10
Identity = 44/123 (35.77%), Postives = 66/123 (53.66%), Query Frame = 1 

Query: 8   EWVPVPDTSTPCVKEIVNDAVKKHNEEIIATGGNSGDLLTLNKIISGTIKEIDDNTTEHK 67
           +W+ +PDT TPCV ++   AV  +N+          D L   K+I G   EID + T+ +
Sbjct: 9   KWIQIPDTKTPCVIDLGKYAVDDYNKA-------HKDNLVFKKVIIGWYLEIDYDKTKLR 68

Query: 68  FYIEATNGNGVVGTYEPHVLVEEKDGTRVRTLLSFPQGYKDEKGQFWIRIPDVDESCVQD 127
             IE  N  G V  YE  ++V++KDG +V+T +SF  GY DE      R+ D  E+ V++
Sbjct: 69  LIIEVVNSKGEVIIYEVVIVVDDKDGKKVKTPISFIPGYIDEAKDCLGRVRDY-EALVEE 123

Query: 128 VSK 131
             K
Sbjct: 129 EKK 123

[Close]
BLAST of Lsi05G008370 vs. TAIR10
Match: AT4G16500.1 (AT4G16500.1 Cystatin/monellin superfamily protein)

HSP 1 Score: 49.7 bits (117), Expect = 2.6e-06
Identity = 31/87 (35.63%), Postives = 53/87 (60.92%), Query Frame = 1 

Query: 117 IPDVDESCVQDVSKWAVEQHNKDANDNLIYVSTLEGYYYEVNPHAIRFILHIKAKDCFGR 176
           I +V +  V  V+K+A+E+HNK++ + L++V  +EG    V+    ++ L I AKD  G+
Sbjct: 35  IKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVVS--GTKYDLKIAAKDGGGK 94

Query: 177 WRIYIAIVLEEKPLTEKIRTLEFFKPI 204
            + Y A+V+E+  L  K  +LE FK +
Sbjct: 95  IKNYEAVVVEKLWLHSK--SLESFKAL 117

[Close]
BLAST of Lsi05G008370 vs. NCBI nr
Match: gi|778730266|ref|XP_011659743.1| (PREDICTED: uncharacterized protein LOC101206992 [Cucumis sativus])

HSP 1 Score: 214.2 bits (544), Expect = 2.2e-52
Identity = 111/209 (53.11%), Postives = 140/209 (66.99%), Query Frame = 1 

Query: 1   MSCETIGEWVPVPDTSTPCVKEIVNDAVKKHNEEIIATGGNSGDLLTLNKIISGTIKEID 60
           MSC++   W+ +PD +TPCV E+  D V +HN+        SGD L   ++I G   EID
Sbjct: 226 MSCDSKKTWIKIPDCTTPCVNEVAKDGVNQHNKA-------SGDSLVYKRVIVGWFWEID 285

Query: 61  DNTTEHKFYIEATNGNGVVGTYEPHVLVEEKDGTRVRTLLSFPQGYKDEKGQ--FWIRIP 120
           D+  +H+  IE     GVV  YE  ++V +KDG RVRTL+SF  GY DEK    FWI+IP
Sbjct: 286 DHAIKHRLIIEVVTSKGVVLIYELIIVVVQKDGKRVRTLISFLPGYLDEKNPLIFWIKIP 345

Query: 121 DVDESCVQDVSKWAVEQHNKDANDNLIYVSTLEGYYYEVNPHAIRFILHIKAKDCFGRWR 180
           DV +SCVQD +KWAV +HNK  +D L Y ST+EG+Y+EVNP  I F LHIKAK+C GR R
Sbjct: 346 DVKKSCVQDCAKWAVTEHNKITHDYLAYDSTVEGWYHEVNPFVIIFKLHIKAKECIGRVR 405

Query: 181 IYIAIVLEEKPLTEKIRTLEFFKPI-PRK 207
            YIA+V EEKPLTEKI+ LE F  I P+K
Sbjct: 406 DYIAVVKEEKPLTEKIKKLEDFYLIRPKK 427

[Close]
BLAST of Lsi05G008370 vs. NCBI nr
Match: gi|700188975|gb|KGN44208.1| (Phloem filament protein [Cucumis sativus])

HSP 1 Score: 214.2 bits (544), Expect = 2.2e-52
Identity = 111/209 (53.11%), Postives = 140/209 (66.99%), Query Frame = 1 

Query: 1   MSCETIGEWVPVPDTSTPCVKEIVNDAVKKHNEEIIATGGNSGDLLTLNKIISGTIKEID 60
           MSC++   W+ +PD +TPCV E+  D V +HN+        SGD L   ++I G   EID
Sbjct: 1   MSCDSKKTWIKIPDCTTPCVNEVAKDGVNQHNKA-------SGDSLVYKRVIVGWFWEID 60

Query: 61  DNTTEHKFYIEATNGNGVVGTYEPHVLVEEKDGTRVRTLLSFPQGYKDEKGQ--FWIRIP 120
           D+  +H+  IE     GVV  YE  ++V +KDG RVRTL+SF  GY DEK    FWI+IP
Sbjct: 61  DHAIKHRLIIEVVTSKGVVLIYELIIVVVQKDGKRVRTLISFLPGYLDEKNPLIFWIKIP 120

Query: 121 DVDESCVQDVSKWAVEQHNKDANDNLIYVSTLEGYYYEVNPHAIRFILHIKAKDCFGRWR 180
           DV +SCVQD +KWAV +HNK  +D L Y ST+EG+Y+EVNP  I F LHIKAK+C GR R
Sbjct: 121 DVKKSCVQDCAKWAVTEHNKITHDYLAYDSTVEGWYHEVNPFVIIFKLHIKAKECIGRVR 180

Query: 181 IYIAIVLEEKPLTEKIRTLEFFKPI-PRK 207
            YIA+V EEKPLTEKI+ LE F  I P+K
Sbjct: 181 DYIAVVKEEKPLTEKIKKLEDFYLIRPKK 202

[Close]
BLAST of Lsi05G008370 vs. NCBI nr
Match: gi|778664635|ref|XP_011660324.1| (PREDICTED: uncharacterized protein LOC105436367 [Cucumis sativus])

HSP 1 Score: 184.5 bits (467), Expect = 1.9e-43
Identity = 101/207 (48.79%), Postives = 135/207 (65.22%), Query Frame = 1 

Query: 1   MSCETIGEWVPVPDTSTPCVKEIVNDAVKKHNEEIIATGGNSGDLLTLNKIISGTIKEID 60
           MSC   GEW  +P  +TPCV +I N AV +HN+E       +G+ LTL  +I G   E+ 
Sbjct: 1   MSCVDKGEWSKIPVCTTPCVLDIANFAVTEHNKE-------TGEKLTLKSVIKGWFLELG 60

Query: 61  DNTTEHKFYIEATNGNGVVGTYEPHVLVEE-KDGTRVRTLLSFPQGYKDEKGQFWIRIPD 120
           D   + + YI A N  GVV TYE  V V E  D  RV+ LLSF  GY DEK  FWI I D
Sbjct: 61  DVKLKFRLYILAANDKGVVLTYEAVVCVTEIGDFKRVKKLLSFNVGYLDEKDVFWIVIVD 120

Query: 121 VDESCVQDVSKWAVEQHNKDANDNLIYVSTLEGYYYEVNPH-AIRFILHIKAKDCFGRWR 180
              SCVQDV+K+AV +HN+D +D+L+Y+S  +G+Y E++P+ AI F +H+  KDCFGR R
Sbjct: 121 TKASCVQDVAKFAVAKHNEDEHDSLVYLSITKGWYRELDPYNAIFFEIHLTTKDCFGRVR 180

Query: 181 IYIAIVLEEKPLTEKIRTLEFFKPIPR 206
            + A+VLE+KP  EKIRTL++F+ I +
Sbjct: 181 EFKALVLEDKPQKEKIRTLKYFEVIKK 200

[Close]
BLAST of Lsi05G008370 vs. NCBI nr
Match: gi|659092737|ref|XP_008447193.1| (PREDICTED: uncharacterized protein LOC103489701 [Cucumis melo])

HSP 1 Score: 165.6 bits (418), Expect = 9.1e-38
Identity = 94/209 (44.98%), Postives = 128/209 (61.24%), Query Frame = 1 

Query: 1   MSCETIGE-WVPVPDTSTPCVKEIVNDAVKKHNEEIIATGGNSGDLLTLNKIISGTIKEI 60
           MSCET  E W+ + DT+TPCV      AV  HN+E        GD L   K+I G   EI
Sbjct: 1   MSCETKKEQWIQIHDTTTPCVINFGKHAVDDHNKE-------KGDNLVFKKVIIGWYLEI 60

Query: 61  DDNTTEHKFYIEATNGNGVVGTYEPHVLVEEKDGTRVRTLLSFPQGYKDEKG--QFWIRI 120
           D N T+ +  IE  N  G V T+E  ++V++KDG  V+T++SF  G+ DEK    FWI+I
Sbjct: 61  DYNKTKLRLIIEVVNSKGEVITFEVVIVVDDKDGKTVKTVISFVPGHIDEKNPWTFWIKI 120

Query: 121 PDVDESCVQDVSKWAVEQHNKDANDNLIYVSTLEGYYY-EVNPHAIRFILHIKAKDCFGR 180
            +V E  VQ+++K+AVE+HNK  +DNLIY+  +EG+Y+    P    + LH+KAKDC GR
Sbjct: 121 HNVTEPHVQEIAKFAVEEHNKITHDNLIYICIIEGWYHVSTIPPVTLWKLHLKAKDCLGR 180

Query: 181 WRIYIAIVLEEKPLTEKIRTLEFFKPIPR 206
            R Y A+V EEK L + +  LE F  IP+
Sbjct: 181 VREYEALVKEEKLLPKHVLKLEHFIVIPK 202

[Close]
BLAST of Lsi05G008370 vs. NCBI nr
Match: gi|1753099|gb|AAC12676.1| (phloem filament protein [Cucurbita maxima])

HSP 1 Score: 111.3 bits (277), Expect = 2.0e-21
Identity = 72/207 (34.78%), Postives = 111/207 (53.62%), Query Frame = 1 

Query: 6   IGEWVPVPDTSTPCVKEIVNDAVKKHNEEIIATGGNSGDLLTLNKIISGTIKEIDDNTTE 65
           + +W+ +PD S  CV+E+   AV++ N +        G  L  + I  G   E+  N  +
Sbjct: 14  VEKWIKIPDVSGHCVQEVAKLAVEQFNVQ-------HGHSLKYDSIHEGWYCELGQNNLK 73

Query: 66  HKFYIEATNGNGVVGTYEPHVLVEEKDGTRVRTLLSFPQGYKDEKGQF-----------W 125
           ++ +I A +       YE  V  E+    R+R L+SF   Y    G +           W
Sbjct: 74  YRLHIRAIDFLQRSLLYEALVFEEKPKLERIRKLISFL--YLLNGGHYVGPVDPPQVEKW 133

Query: 126 IRIPDVDESCVQDVSKWAVEQHNKDANDNLIYVSTLEGYYYEVNPHAIRFILHIKAKDCF 185
           I+IPD+    VQ+VSK+A++++NK   + L YV   +G+Y E+    I+F LH+KAKDC 
Sbjct: 134 IKIPDLRVPFVQEVSKFAIDEYNK-GGEGLKYVEIYDGWYAEMGQDNIKFRLHVKAKDCL 193

Query: 186 GRWRIYIAIVLEEKPLTEKIRTLEFFK 202
           GR R Y AIVL ++ L++KI+ LE FK
Sbjct: 194 GRLRNYEAIVLVKQFLSKKIKILESFK 210

The following BLAST results are available for this feature:
BLAST of Lsi05G008370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi05G008370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3W6_CUCSA1.5e-5253.11Phloem filament protein OS=Cucumis sativus GN=Csa_7G222880 PE=4 SV=1[more]
A0A0A0LYF4_CUCSA1.3e-4348.79Phloem filament protein OS=Cucumis sativus GN=Csa_1G710160 PE=4 SV=1[more]
P94012_CUCMA1.4e-2134.78Phloem filament protein OS=Cucurbita maxima GN=PP1 PE=4 SV=1[more]
Q7DMD5_CUCMA4.4e-1531.35Phloem filament protein (Fragment) OS=Cucurbita maxima GN=cPC7 PE=2 SV=1[more]
A0A0A0K7B3_CUCSA2.5e-1035.77Phloem filament protein OS=Cucumis sativus GN=Csa_7G222870 PE=4 SV=1[more]
BLAST of Lsi05G008370 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16500.12.6e-0635.63 Cystatin/monellin superfamily protein[more]
BLAST of Lsi05G008370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778730266|ref|XP_011659743.1|2.2e-5253.11PREDICTED: uncharacterized protein LOC101206992 [Cucumis sativus][more]
gi|700188975|gb|KGN44208.1|2.2e-5253.11Phloem filament protein [Cucumis sativus][more]
gi|778664635|ref|XP_011660324.1|1.9e-4348.79PREDICTED: uncharacterized protein LOC105436367 [Cucumis sativus][more]
gi|659092737|ref|XP_008447193.1|9.1e-3844.98PREDICTED: uncharacterized protein LOC103489701 [Cucumis melo][more]
gi|1753099|gb|AAC12676.1|2.0e-2134.78phloem filament protein [Cucurbita maxima][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR020381Proteinase inhibitor I25, cystatin, conserved region
IPR009994PP1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G008370.1Lsi05G008370.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009994Phloem filament PP1PFAMPF07430PP1coord: 124..199
score: 2.6
IPR020381Proteinase inhibitor I25, cystatin, conserved regionPRODOMPD001231coord: 128..201
score: 2.
NoneNo IPR availableGENE3DG3DSA:3.10.450.10coord: 116..198
score: 8.
NoneNo IPR availableunknownSSF54403Cystatin/monellincoord: 5..88
score: 8.5E-7coord: 114..204
score: 3.64

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G008370Wax gourdlsiwgoB461
Lsi05G008370Watermelon (Charleston Gray)lsiwcgB314
Lsi05G008370Watermelon (97103) v2lsiwmbB352