Lsi05G008150 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G008150
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	ATP-dependent RNA helicase, putative
Location	chr05 : 12642139 .. 12648792 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCATAAGTCGCAATTCTTCTTATTATTCTTCATCGTCATCTTCTTCTACTTCTTCTACTGCTACTTCTACTACCTACCAGAAAGTGAAATACAGTCAGTGTCCAAGACTCCCAAGTCTTCGACCGCAAGAACACGAAGAACACGAACACGAAGAAGCCATAATCGTCCAACGCAGTCACAACCCATCTCACAAAGCAACTCAACAGGTTCGTTTCTTGTGTTTTTCTTTTCTATCCTTTTCTTTTCCTTTACTCACAACTCTCTCTCTCTCTCTCTCTTTCTCTCTGCTTTTTAGGGTTTTCCTCTCTCTCTTCCATGCCACCATGAAATCTTCTTCTTCCACCGCCTTCCGCCCACCGGATTCTTCCTTCAGATGTACTCGCGCTTCCAACTTACACTACCTTCCGCGTTCTCCCAATACCGGCCCTTCTACCCCCGACTATCCTGCGCAATTTCGTAAGTTTTCCGGACAACAAACTTCCCCAAACCGCGCGAATTTCGTTATTGACCTCGTCTTGGAGCATCGTGGCGTTCTCAAGTCTTCTGTTGAGGATTTAATCGCAAAATGCAACTCCAAGCCGGATAATTTTATTGTCCCCCACGTTGGTTCTGTTTCTGCGTTTATGTATTTCAAGCAGTGGGTTTCTGCTCTTGAGGCTATGGTTGAGCTCTGGGAATTGCGCCTTGATGGTCTTCATGGTTTCACTCCTATTCTCAAACCTAGGATCAATTTGCCCTCTGATTTCGACGAACTCCATGACCGGCTTCGGAACCTCTTTGCTGAACGTATCAAGCGTCTCATGGATGGCGAGAAGGTCCGACATTGGCAAAACAAATGCGATCTTGTTATGGATGAAATTGATCGAATTTTGGATATGCTTCGGAGGCCCCTTCGTATCGCCACTGTTTTTGAACTCAAAGAAAAGAAGAAGGGGCTTCTTATCGAGAAGAAATCAATTATGAGGAAGGTGGAAGAGTTTAACTCTGCTATGCGTTACATTCTGGATTACGTGGAAGGAAAGAAACTGGAATCATCAGATTCCCACGACTTGGGGTTTTTTACATTTGATGAGACAATTAACTGGAATCGGATTCATAGCTTGATTTTGAGAGAATGCCGCAGACTTGAGGATGGTTTGCCCATGTATTCTTGCCGCCAGGAAATCCTTCGGCAAATTCAGTGTCAACAGGTCCCTTTTTTCTTCTTCAGCTCTTGATTTTAATTTTACCCTGAATTTTTCATTCTTTCTATTTGTTTGGTTGCGGTTAGTAATTGGAGGTAGAGAGCTATATAGTTTACCAAGCGTATTTAACATTGTATACGCATATGCAAAAGTTGTTTCAAGAAAAAGCCACCTTTTTTTTATTGTGATTAATACTTAGGTTCATTAAAGAATATGTTAAGCATGCGAACCTACGCGTTTCGGTCACAATCACAAGCCTTGTGCATCACGATTACTGGGTAAGAAATTTAGACTAGCAGTTGAAAAATAGTTTTACTCTTTACATGAAAGAGTTGAAGAAACGACACAGCTCATCTTCCTCTGGAGATGCAACTTGTAGTATATTGATTTAATTTTTCCAGACAGCTAATGAACTTGTCAGTTGATGTTTATATGAACTCTTTGAAATGGTCTAACATTCATAAACAAGTTGTTGACGGGCAAACGTTTGCAACTTCCTGGATTTCAATAATTTTACCAAATTTAGTTTCTACATGGACTTGGAGTGATGAAGTTCTGCTGATTATTCTTTCATTCATAATAAGTGTGCATCTCAAGTTACTTCTAAATCTTATTTAGTCTATACACCACTGTAATAATTTAAATATGTATGATTCTTTTTATTTAGGTAATGGTATTGGTTGGAGAGACTGGTTCAGGAAAGAGCACACAGTTGGTTCAGTTTCTTGCTGATTCGGGACTTTCTGCTTCTAAGTCTATTGTATGTACACAGCCTCGCAAGATATCTGCTGTCTCCCTTGCCCATCGGGTGAGGGAAGAAAGCCGTGGGTGTTATGATGATGATGATTATATAAGCTGTTATCCATCATTTTCATCTGCTCAACAGTTCAAATCTAAGATAATATACATGACGGACCACTGTTTACTGCAGCACTACATGAATGATAAAAAGCTTTCTGATGTTTCCTGCATTATAATTGATGAGGCTCACGAAAGAAGTTTGAATACTGATCTTCTTTTGGCATTACTCAAGAGTTTACTCATGGTGAGAATTGACTTGCATCTTATTATTATGTCTGCAACAGCCAATGCAGACCAACTATCAAAGTACTTTTTTGGATGTGGCATCTTTCATGTTCCGGGGAGGAACTTTCCTGTTGATATTAAATATGTTCCTTCTTCCGATGAAGGCACTTCTAGTTCTGGCATTGTTGCTTCATATGTTACCGATGTCGTAAGAATGTCGTCTGAGATTCACTGGCAAGAAAAAGGAGGGACTATTCTTGCATTTTTGACTTCTCAAATGGAAGTAGAATGGGCATGTGAAAATTTTCATGCTCCTGGTACAGTTCCCTTGGCATTTCATGGTAAGCTATCCTTCGATGAGCAATTTCGTGTCTTCCAGGACCATCCTGGAAAGAGAAAGGTTATTTTTGCCACAAATCTTGCAGAGACATCATTGACAATTCCTGGGGTCAAGTATGTTATAGATCCTGGTTGGGTCAAAGATAGCAAATTTGAACCTGGAAGTGGTATGAATATTCTTAAGGTCTGCAGAACCAGTCAGAGTTCTGCAAATCAACGAGCTGGTCGTGCTGGTAGAACAGAACCTGGAAGGTGTTATAGACTGTACACAGAGTCTGAGTTTGAGCTAATGTCTCCTAATCATGAACCTGAGATTCGTAAGGTTCATCTGGGTGTTGCAATATTGAGAATTCTTGCCTTGGGTGTAAAGAATGTGGATGATTTTGACTTTGTGGATGCTCCCAGTGCTGAAGCTGTTGACATGGCCATCAGAAATCTCGTTCAGTTGGGAGCTATTACACTGAATAATAAGGTTTATGAATTAACAAATGAAGGTTGCAATTTAGTAAAGTTGGGCATTGAGCCGCGCCTCGGCAAGTTGATTCTTAGTTGCTTTGATTGTCGTGTTCGTAGAGAGGGTGTTGTACTAGCTGTTCTAATGACAAATGCTAGTAGTATATTTTGCCGAGTTGGTAGAGTTGAAGATAAATTAAAATCTGATTGCCAGAAAGTTCAATTTTGCCATGCTGATGGTGATCTTTTCACTCTGCTCTCGGTTTATAAACAATATGAAGCTTTGCCTAAGGAGAAGAAAAATAAATGGTGTTGGGAGAACAGCATTAATGCCAAAACTATGAGAAGATGCCAAGATGCTATCTTGGAATTGGAACGTTGTCTCAAACAAGAACTTCACATTATCATTCCAAGTTATTGGCTTTGGAGTCCGCTAAAGCCTTCAGATCATGACAGAAATCTTAAGAAGTGTATACTTGCTTCTCTTGCTGAGAATGTGGCCATGTTCACTGGTTATGATCGACTGGGTTATGAAGTGGCATTGACTGGACAACATGTTCAGCTACATCCTTCATGTTCTTTGCTAATATTTAGTGAGAGGCCCAAATGGGTGGTGTTCGGTGAAATTTTGTCAATAACTAATGAATATTTGGTCTGTGTAACTGCTTTTGACGTAGATGCTTTGTTGACCCTTTCCCCTCCTCCTTTGTTTGACATATCTAATATGGAGCAACATAGGCTTGAAGGACGAGTTCTTAGCGGCTTTGGCAAAACTCTACTTAAAAGAGTTTGTGGGAAAAGCAACAGTAATCTTCTTTCTCTTACATCACATGTTCAAAAAGTTTTCAGTGATAACTGCATAGGCATTGAAGTGAATATAAATCAGAATGAGATTCTTTTGTTTTCAAGAACAGAGAACATGGATAAGGTGTGTCATTTTGTAAACGATATATTGGAGTATGAAAGGAAGTATTTGTTGAATGAATGCATGGAAAAATGCTTGTATCATGGAAATGGTGGCTCAACTCCAGTTGCTTTGTTGGGTGCTGGTGCTAAAATAAGACATCTGGAGCTTGAGAAGAGATATTTGACTGTTTATGCATATCGTTCGAATGTGGACATCATTGATGATAAGGAGTTTTTTATGTCTCTTGAGAAATTTGTATCTGGTACAGTTTGTGCTATTCAAAAAGTTTCATGTTCTGGACAGGATGTTGATGACAAAGAAAGAGGACATAGAATAACATTTCTTACTCCTGATGCAGCTGAAAAAGCTTCCAAGTTCGATAGTGATTCCTTTTGTGGATCCTTGGTGAAGATAACTCCTTCGCAGTTGACTGCTGGATGTGACAATAAACTGTTCACTTTTCCTCCCGTCAAAGCTAAAGTCTTTTGGCCTCGTAGGTTGAGCAAAGGATTTGCAGTTGTTAAATGTAACATTTATGATGTTGGTTTCATTCTTAATGATTTCTCTAACCTACAGATTGGGGATAGGTTCTTACGTTCTGAACCTAGCATAAAGTACAGTGACTGTGTTACTATTAGTGGAATTGACAAAGAGCTTTCTGAAGCTGATATTTTAAATGTTCTGAGGTCTGTAACAGACAGGAAAATTTTGGATCTTTTTCTAGTTCGGGAAAATGCTGTTGACAACCCCCCAGTTCATTCTTGTGAAGAAGCTCTTCTAAAAGAAATTTCTCCTTTTATGCCTAAATCGAACCCTCATGCCAAATGTTGTCATGTTCAAGTTTTTCCACCTCAACCCAAGGATTTTTACATGAGAGCTGCAATAAATTTTGATGGAAGATTGCATTTGGAGGCAGCAAAAGCTTTGGAGTGTTTGGAAGGAAAAGCACTGTCTGTATGTTTTCCATGGCAGAAAATAAAGTGCCAGCAGTTATTTCATAGCACTTTATCCTGCACCATCCCCATATATAGAGTGATAAAACCTCAACTGAATTCCTTACTTGAAAGCTTCAGGAAGATAGATGGTATTTTCTCTATTGGATCATCATCTTTTTTAAATGTTAGATTATGTTTGGTATTTTCCTGTCTCTTTTTTCAATGCATGTGCTATTCTTTATTTCTGAACAAATTTTCGAATTGTTGGGTCAATTTTCTGTCAAATCTTAAATTCTAGCACCGTAATTTTTGTATTTTATTAAATATTTACATGGGTTCTATAACATTTGATACTCATAAAAGTCTTTGGTAATCTACATCAAAGTTGGCACACCATTTTGTTGGTCTATATTGGACACAGATGAGGTCTACTTGTTGCAAATTTGTTAATTTCACTCCTGCTTTTATTTTCTGCATTTATACAAGTATGTGTCAGTGCCAACCCTTCTTGAAGGTGGGGGAACTAGATGAAGATTATTATAGTTTGGTTTGGTCGGATTCTGATGACCTTGAATCTTCATGTCAACCAGGTGTGGAATGCACTCTTTCTCAAAACGTCAATGGTTCTTACCGAGTGAAGCTATCTGCCAATGCCACAAAAACAGTAGCTGAGCTGAGACGACCAGTGGAAGAGCTTCTGAGAGGGAAGATTATAGATCATGCTAGCCTGACTCCAACTGTTCTGCAGCACCTGACCTCTAGAGCTGGTTTTGATCTAATAAATTTTCTACAGCGGGAAAATGGAGTCTACATTCTCTTCGACAGGCAGAGACTTAGTCTACGGATTTTTGGTGCTTCTGAGAAGATAGCTGAAGCAGAGCAGAAGTTGATTCAATCCCTCCAGACAATTCATGAAAGCAAACAACTTGAGATTCACCTTCGAGGCAAATCCTTGCCTCCCAACCTCTTGAAGGCAGTGGTTGAGAAGTTCGGTCCAGATCTCAACGGCCTTAAACAGAAGTTTCCAGGGGCTGGATTTACATTAAATACACGGCGCCATATTTTATATGTCCAGGGTAGTAAGGATTTGAAGCAGGAAGTTGAAACTATCATTTTTGAGCTTGCAAAGATGAGTGGTGGTTCAGCCGAGAGGCCAGACGATGCAGATGCTTGTCCAATTTGCTTATGTGACATCGAAGACGACAGGTTTGAGCTGGAAGCCTGTGGGCACCATTTTTGCCGTCAATGCCTTGTGGAGCAGTTTGAGTCCGCCATAAAAAATCAGGGAAGATTCCCAGTATGTTGTGCCAAACAGAAATGTGAGTCTCCTATTTTACTTGCAGATATGAGAACTCTGTTGTCGAGTGAGAAGTTAGAGGAACTGTTCCGAGCTTCATTGGGAGCTTTCGTTGCTTCTAGTGATGGTGCCTATAGGTTTTGCCCGTCTCCCGACTGTCCCTCAGTTTACCGAGTGGCCAGCCCTGATATGTCTGGGGAACCATTTATGTGTGGAGCATGCTACTCAGAAACTTGTAATAGGTGCCATTTGGAGTATCATCCTTTCCTGTCATGCGAACAGTATCGAGTGTTTAAGGAAGACCCAGATTCGTCACTGAGTGAGTGGCGGAAAGATAAAGAGAATGTGAAGAACTGCCCGGTGTGCGGGTACACGATCGAGAAGATGGATGGGTGCAACCATGTTGAATGTAGGTGTGGAAGGCATATTTGTTGGGTGTGTTTGGAGTATTTTGGTAGCAGTGATGAATGCTATATCCATTTGAGGAGCATCCATATGACCATCGTTTGA

mRNA sequence

AAATCATAAGTCGCAATTCTTCTTATTATTCTTCATCGTCATCTTCTTCTACTTCTTCTACTGCTACTTCTACTACCTACCAGAAAGTGAAATACAGTCAGTGTCCAAGACTCCCAAGTCTTCGACCGCAAGAACACGAAGAACACGAACACGAAGAAGCCATAATCGTCCAACGCAGTCACAACCCATCTCACAAAGCAACTCAACAGGGTTTTCCTCTCTCTCTTCCATGCCACCATGAAATCTTCTTCTTCCACCGCCTTCCGCCCACCGGATTCTTCCTTCAGATGTACTCGCGCTTCCAACTTACACTACCTTCCGCGTTCTCCCAATACCGGCCCTTCTACCCCCGACTATCCTGCGCAATTTCGTAAGTTTTCCGGACAACAAACTTCCCCAAACCGCGCGAATTTCGTTATTGACCTCGTCTTGGAGCATCGTGGCGTTCTCAAGTCTTCTGTTGAGGATTTAATCGCAAAATGCAACTCCAAGCCGGATAATTTTATTGTCCCCCACGTTGGTTCTGTTTCTGCGTTTATGTATTTCAAGCAGTGGGTTTCTGCTCTTGAGGCTATGGTTGAGCTCTGGGAATTGCGCCTTGATGGTCTTCATGGTTTCACTCCTATTCTCAAACCTAGGATCAATTTGCCCTCTGATTTCGACGAACTCCATGACCGGCTTCGGAACCTCTTTGCTGAACGTATCAAGCGTCTCATGGATGGCGAGAAGGTCCGACATTGGCAAAACAAATGCGATCTTGTTATGGATGAAATTGATCGAATTTTGGATATGCTTCGGAGGCCCCTTCGTATCGCCACTGTTTTTGAACTCAAAGAAAAGAAGAAGGGGCTTCTTATCGAGAAGAAATCAATTATGAGGAAGGTGGAAGAGTTTAACTCTGCTATGCGTTACATTCTGGATTACGTGGAAGGAAAGAAACTGGAATCATCAGATTCCCACGACTTGGGGTTTTTTACATTTGATGAGACAATTAACTGGAATCGGATTCATAGCTTGATTTTGAGAGAATGCCGCAGACTTGAGGATGGTTTGCCCATGTATTCTTGCCGCCAGGAAATCCTTCGGCAAATTCAGTGTCAACAGGTAATGGTATTGGTTGGAGAGACTGGTTCAGGAAAGAGCACACAGTTGGTTCAGTTTCTTGCTGATTCGGGACTTTCTGCTTCTAAGTCTATTGTATGTACACAGCCTCGCAAGATATCTGCTGTCTCCCTTGCCCATCGGGTGAGGGAAGAAAGCCGTGGGTGTTATGATGATGATGATTATATAAGCTGTTATCCATCATTTTCATCTGCTCAACAGTTCAAATCTAAGATAATATACATGACGGACCACTGTTTACTGCAGCACTACATGAATGATAAAAAGCTTTCTGATGTTTCCTGCATTATAATTGATGAGGCTCACGAAAGAAGTTTGAATACTGATCTTCTTTTGGCATTACTCAAGAGTTTACTCATGGTGAGAATTGACTTGCATCTTATTATTATGTCTGCAACAGCCAATGCAGACCAACTATCAAAGTACTTTTTTGGATGTGGCATCTTTCATGTTCCGGGGAGGAACTTTCCTGTTGATATTAAATATGTTCCTTCTTCCGATGAAGGCACTTCTAGTTCTGGCATTGTTGCTTCATATGTTACCGATGTCGTAAGAATGTCGTCTGAGATTCACTGGCAAGAAAAAGGAGGGACTATTCTTGCATTTTTGACTTCTCAAATGGAAGTAGAATGGGCATGTGAAAATTTTCATGCTCCTGGTACAGTTCCCTTGGCATTTCATGGTAAGCTATCCTTCGATGAGCAATTTCGTGTCTTCCAGGACCATCCTGGAAAGAGAAAGGTTATTTTTGCCACAAATCTTGCAGAGACATCATTGACAATTCCTGGGGTCAAGTATGTTATAGATCCTGGTTGGGTCAAAGATAGCAAATTTGAACCTGGAAGTGGTATGAATATTCTTAAGGTCTGCAGAACCAGTCAGAGTTCTGCAAATCAACGAGCTGGTCGTGCTGGTAGAACAGAACCTGGAAGGTGTTATAGACTGTACACAGAGTCTGAGTTTGAGCTAATGTCTCCTAATCATGAACCTGAGATTCGTAAGGTTCATCTGGGTGTTGCAATATTGAGAATTCTTGCCTTGGGTGTAAAGAATGTGGATGATTTTGACTTTGTGGATGCTCCCAGTGCTGAAGCTGTTGACATGGCCATCAGAAATCTCGTTCAGTTGGGAGCTATTACACTGAATAATAAGGTTTATGAATTAACAAATGAAGGTTGCAATTTAGTAAAGTTGGGCATTGAGCCGCGCCTCGGCAAGTTGATTCTTAGTTGCTTTGATTGTCGTGTTCGTAGAGAGGGTGTTGTACTAGCTGTTCTAATGACAAATGCTAGTAGTATATTTTGCCGAGTTGGTAGAGTTGAAGATAAATTAAAATCTGATTGCCAGAAAGTTCAATTTTGCCATGCTGATGGTGATCTTTTCACTCTGCTCTCGGTTTATAAACAATATGAAGCTTTGCCTAAGGAGAAGAAAAATAAATGGTGTTGGGAGAACAGCATTAATGCCAAAACTATGAGAAGATGCCAAGATGCTATCTTGGAATTGGAACGTTGTCTCAAACAAGAACTTCACATTATCATTCCAAGTTATTGGCTTTGGAGTCCGCTAAAGCCTTCAGATCATGACAGAAATCTTAAGAAGTGTATACTTGCTTCTCTTGCTGAGAATGTGGCCATGTTCACTGGTTATGATCGACTGGGTTATGAAGTGGCATTGACTGGACAACATGTTCAGCTACATCCTTCATGTTCTTTGCTAATATTTAGTGAGAGGCCCAAATGGGTGGTGTTCGGTGAAATTTTGTCAATAACTAATGAATATTTGGTCTGTGTAACTGCTTTTGACGTAGATGCTTTGTTGACCCTTTCCCCTCCTCCTTTGTTTGACATATCTAATATGGAGCAACATAGGCTTGAAGGACGAGTTCTTAGCGGCTTTGGCAAAACTCTACTTAAAAGAGTTTGTGGGAAAAGCAACAGTAATCTTCTTTCTCTTACATCACATGTTCAAAAAGTTTTCAGTGATAACTGCATAGGCATTGAAGTGAATATAAATCAGAATGAGATTCTTTTGTTTTCAAGAACAGAGAACATGGATAAGGTGTGTCATTTTGTAAACGATATATTGGAGTATGAAAGGAAGTATTTGTTGAATGAATGCATGGAAAAATGCTTGTATCATGGAAATGGTGGCTCAACTCCAGTTGCTTTGTTGGGTGCTGGTGCTAAAATAAGACATCTGGAGCTTGAGAAGAGATATTTGACTGTTTATGCATATCGTTCGAATGTGGACATCATTGATGATAAGGAGTTTTTTATGTCTCTTGAGAAATTTGTATCTGGTACAGTTTGTGCTATTCAAAAAGTTTCATGTTCTGGACAGGATGTTGATGACAAAGAAAGAGGACATAGAATAACATTTCTTACTCCTGATGCAGCTGAAAAAGCTTCCAAGTTCGATAGTGATTCCTTTTGTGGATCCTTGGTGAAGATAACTCCTTCGCAGTTGACTGCTGGATGTGACAATAAACTGTTCACTTTTCCTCCCGTCAAAGCTAAAGTCTTTTGGCCTCGTAGGTTGAGCAAAGGATTTGCAGTTGTTAAATGTAACATTTATGATGTTGGTTTCATTCTTAATGATTTCTCTAACCTACAGATTGGGGATAGGTTCTTACGTTCTGAACCTAGCATAAAGTACAGTGACTGTGTTACTATTAGTGGAATTGACAAAGAGCTTTCTGAAGCTGATATTTTAAATGTTCTGAGGTCTGTAACAGACAGGAAAATTTTGGATCTTTTTCTAGTTCGGGAAAATGCTGTTGACAACCCCCCAGTTCATTCTTGTGAAGAAGCTCTTCTAAAAGAAATTTCTCCTTTTATGCCTAAATCGAACCCTCATGCCAAATGTTGTCATGTTCAAGTTTTTCCACCTCAACCCAAGGATTTTTACATGAGAGCTGCAATAAATTTTGATGGAAGATTGCATTTGGAGGCAGCAAAAGCTTTGGAGTGTTTGGAAGGAAAAGCACTGTCTGTGGGGGAACTAGATGAAGATTATTATAGTTTGGTTTGGTCGGATTCTGATGACCTTGAATCTTCATGTCAACCAGGTGTGGAATGCACTCTTTCTCAAAACGTCAATGGTTCTTACCGAGTGAAGCTATCTGCCAATGCCACAAAAACAGTAGCTGAGCTGAGACGACCAGTGGAAGAGCTTCTGAGAGGGAAGATTATAGATCATGCTAGCCTGACTCCAACTGTTCTGCAGCACCTGACCTCTAGAGCTGGTTTTGATCTAATAAATTTTCTACAGCGGGAAAATGGAGTCTACATTCTCTTCGACAGGCAGAGACTTAGTCTACGGATTTTTGGTGCTTCTGAGAAGATAGCTGAAGCAGAGCAGAAGTTGATTCAATCCCTCCAGACAATTCATGAAAGCAAACAACTTGAGATTCACCTTCGAGGCAAATCCTTGCCTCCCAACCTCTTGAAGGCAGTGGTTGAGAAGTTCGGTCCAGATCTCAACGGCCTTAAACAGAAGTTTCCAGGGGCTGGATTTACATTAAATACACGGCGCCATATTTTATATGTCCAGGGTAGTAAGGATTTGAAGCAGGAAGTTGAAACTATCATTTTTGAGCTTGCAAAGATGAGTGGTGGTTCAGCCGAGAGGCCAGACGATGCAGATGCTTGTCCAATTTGCTTATGTGACATCGAAGACGACAGGTTTGAGCTGGAAGCCTGTGGGCACCATTTTTGCCGTCAATGCCTTGTGGAGCAGTTTGAGTCCGCCATAAAAAATCAGGGAAGATTCCCAGTATGTTGTGCCAAACAGAAATGTGAGTCTCCTATTTTACTTGCAGATATGAGAACTCTGTTGTCGAGTGAGAAGTTAGAGGAACTGTTCCGAGCTTCATTGGGAGCTTTCGTTGCTTCTAGTGATGGTGCCTATAGGTTTTGCCCGTCTCCCGACTGTCCCTCAGTTTACCGAGTGGCCAGCCCTGATATGTCTGGGGAACCATTTATGTGTGGAGCATGCTACTCAGAAACTTGTAATAGGTGCCATTTGGAGTATCATCCTTTCCTGTCATGCGAACAGTATCGAGTGTTTAAGGAAGACCCAGATTCGTCACTGAGTGAGTGGCGGAAAGATAAAGAGAATGTGAAGAACTGCCCGGTGTGCGGGTACACGATCGAGAAGATGGATGGGTGCAACCATGTTGAATGTAGGTGTGGAAGGCATATTTGTTGGGTGTGTTTGGAGTATTTTGGTAGCAGTGATGAATGCTATATCCATTTGAGGAGCATCCATATGACCATCGTTTGA

Coding sequence (CDS)

ATGAAATCTTCTTCTTCCACCGCCTTCCGCCCACCGGATTCTTCCTTCAGATGTACTCGCGCTTCCAACTTACACTACCTTCCGCGTTCTCCCAATACCGGCCCTTCTACCCCCGACTATCCTGCGCAATTTCGTAAGTTTTCCGGACAACAAACTTCCCCAAACCGCGCGAATTTCGTTATTGACCTCGTCTTGGAGCATCGTGGCGTTCTCAAGTCTTCTGTTGAGGATTTAATCGCAAAATGCAACTCCAAGCCGGATAATTTTATTGTCCCCCACGTTGGTTCTGTTTCTGCGTTTATGTATTTCAAGCAGTGGGTTTCTGCTCTTGAGGCTATGGTTGAGCTCTGGGAATTGCGCCTTGATGGTCTTCATGGTTTCACTCCTATTCTCAAACCTAGGATCAATTTGCCCTCTGATTTCGACGAACTCCATGACCGGCTTCGGAACCTCTTTGCTGAACGTATCAAGCGTCTCATGGATGGCGAGAAGGTCCGACATTGGCAAAACAAATGCGATCTTGTTATGGATGAAATTGATCGAATTTTGGATATGCTTCGGAGGCCCCTTCGTATCGCCACTGTTTTTGAACTCAAAGAAAAGAAGAAGGGGCTTCTTATCGAGAAGAAATCAATTATGAGGAAGGTGGAAGAGTTTAACTCTGCTATGCGTTACATTCTGGATTACGTGGAAGGAAAGAAACTGGAATCATCAGATTCCCACGACTTGGGGTTTTTTACATTTGATGAGACAATTAACTGGAATCGGATTCATAGCTTGATTTTGAGAGAATGCCGCAGACTTGAGGATGGTTTGCCCATGTATTCTTGCCGCCAGGAAATCCTTCGGCAAATTCAGTGTCAACAGGTAATGGTATTGGTTGGAGAGACTGGTTCAGGAAAGAGCACACAGTTGGTTCAGTTTCTTGCTGATTCGGGACTTTCTGCTTCTAAGTCTATTGTATGTACACAGCCTCGCAAGATATCTGCTGTCTCCCTTGCCCATCGGGTGAGGGAAGAAAGCCGTGGGTGTTATGATGATGATGATTATATAAGCTGTTATCCATCATTTTCATCTGCTCAACAGTTCAAATCTAAGATAATATACATGACGGACCACTGTTTACTGCAGCACTACATGAATGATAAAAAGCTTTCTGATGTTTCCTGCATTATAATTGATGAGGCTCACGAAAGAAGTTTGAATACTGATCTTCTTTTGGCATTACTCAAGAGTTTACTCATGGTGAGAATTGACTTGCATCTTATTATTATGTCTGCAACAGCCAATGCAGACCAACTATCAAAGTACTTTTTTGGATGTGGCATCTTTCATGTTCCGGGGAGGAACTTTCCTGTTGATATTAAATATGTTCCTTCTTCCGATGAAGGCACTTCTAGTTCTGGCATTGTTGCTTCATATGTTACCGATGTCGTAAGAATGTCGTCTGAGATTCACTGGCAAGAAAAAGGAGGGACTATTCTTGCATTTTTGACTTCTCAAATGGAAGTAGAATGGGCATGTGAAAATTTTCATGCTCCTGGTACAGTTCCCTTGGCATTTCATGGTAAGCTATCCTTCGATGAGCAATTTCGTGTCTTCCAGGACCATCCTGGAAAGAGAAAGGTTATTTTTGCCACAAATCTTGCAGAGACATCATTGACAATTCCTGGGGTCAAGTATGTTATAGATCCTGGTTGGGTCAAAGATAGCAAATTTGAACCTGGAAGTGGTATGAATATTCTTAAGGTCTGCAGAACCAGTCAGAGTTCTGCAAATCAACGAGCTGGTCGTGCTGGTAGAACAGAACCTGGAAGGTGTTATAGACTGTACACAGAGTCTGAGTTTGAGCTAATGTCTCCTAATCATGAACCTGAGATTCGTAAGGTTCATCTGGGTGTTGCAATATTGAGAATTCTTGCCTTGGGTGTAAAGAATGTGGATGATTTTGACTTTGTGGATGCTCCCAGTGCTGAAGCTGTTGACATGGCCATCAGAAATCTCGTTCAGTTGGGAGCTATTACACTGAATAATAAGGTTTATGAATTAACAAATGAAGGTTGCAATTTAGTAAAGTTGGGCATTGAGCCGCGCCTCGGCAAGTTGATTCTTAGTTGCTTTGATTGTCGTGTTCGTAGAGAGGGTGTTGTACTAGCTGTTCTAATGACAAATGCTAGTAGTATATTTTGCCGAGTTGGTAGAGTTGAAGATAAATTAAAATCTGATTGCCAGAAAGTTCAATTTTGCCATGCTGATGGTGATCTTTTCACTCTGCTCTCGGTTTATAAACAATATGAAGCTTTGCCTAAGGAGAAGAAAAATAAATGGTGTTGGGAGAACAGCATTAATGCCAAAACTATGAGAAGATGCCAAGATGCTATCTTGGAATTGGAACGTTGTCTCAAACAAGAACTTCACATTATCATTCCAAGTTATTGGCTTTGGAGTCCGCTAAAGCCTTCAGATCATGACAGAAATCTTAAGAAGTGTATACTTGCTTCTCTTGCTGAGAATGTGGCCATGTTCACTGGTTATGATCGACTGGGTTATGAAGTGGCATTGACTGGACAACATGTTCAGCTACATCCTTCATGTTCTTTGCTAATATTTAGTGAGAGGCCCAAATGGGTGGTGTTCGGTGAAATTTTGTCAATAACTAATGAATATTTGGTCTGTGTAACTGCTTTTGACGTAGATGCTTTGTTGACCCTTTCCCCTCCTCCTTTGTTTGACATATCTAATATGGAGCAACATAGGCTTGAAGGACGAGTTCTTAGCGGCTTTGGCAAAACTCTACTTAAAAGAGTTTGTGGGAAAAGCAACAGTAATCTTCTTTCTCTTACATCACATGTTCAAAAAGTTTTCAGTGATAACTGCATAGGCATTGAAGTGAATATAAATCAGAATGAGATTCTTTTGTTTTCAAGAACAGAGAACATGGATAAGGTGTGTCATTTTGTAAACGATATATTGGAGTATGAAAGGAAGTATTTGTTGAATGAATGCATGGAAAAATGCTTGTATCATGGAAATGGTGGCTCAACTCCAGTTGCTTTGTTGGGTGCTGGTGCTAAAATAAGACATCTGGAGCTTGAGAAGAGATATTTGACTGTTTATGCATATCGTTCGAATGTGGACATCATTGATGATAAGGAGTTTTTTATGTCTCTTGAGAAATTTGTATCTGGTACAGTTTGTGCTATTCAAAAAGTTTCATGTTCTGGACAGGATGTTGATGACAAAGAAAGAGGACATAGAATAACATTTCTTACTCCTGATGCAGCTGAAAAAGCTTCCAAGTTCGATAGTGATTCCTTTTGTGGATCCTTGGTGAAGATAACTCCTTCGCAGTTGACTGCTGGATGTGACAATAAACTGTTCACTTTTCCTCCCGTCAAAGCTAAAGTCTTTTGGCCTCGTAGGTTGAGCAAAGGATTTGCAGTTGTTAAATGTAACATTTATGATGTTGGTTTCATTCTTAATGATTTCTCTAACCTACAGATTGGGGATAGGTTCTTACGTTCTGAACCTAGCATAAAGTACAGTGACTGTGTTACTATTAGTGGAATTGACAAAGAGCTTTCTGAAGCTGATATTTTAAATGTTCTGAGGTCTGTAACAGACAGGAAAATTTTGGATCTTTTTCTAGTTCGGGAAAATGCTGTTGACAACCCCCCAGTTCATTCTTGTGAAGAAGCTCTTCTAAAAGAAATTTCTCCTTTTATGCCTAAATCGAACCCTCATGCCAAATGTTGTCATGTTCAAGTTTTTCCACCTCAACCCAAGGATTTTTACATGAGAGCTGCAATAAATTTTGATGGAAGATTGCATTTGGAGGCAGCAAAAGCTTTGGAGTGTTTGGAAGGAAAAGCACTGTCTGTGGGGGAACTAGATGAAGATTATTATAGTTTGGTTTGGTCGGATTCTGATGACCTTGAATCTTCATGTCAACCAGGTGTGGAATGCACTCTTTCTCAAAACGTCAATGGTTCTTACCGAGTGAAGCTATCTGCCAATGCCACAAAAACAGTAGCTGAGCTGAGACGACCAGTGGAAGAGCTTCTGAGAGGGAAGATTATAGATCATGCTAGCCTGACTCCAACTGTTCTGCAGCACCTGACCTCTAGAGCTGGTTTTGATCTAATAAATTTTCTACAGCGGGAAAATGGAGTCTACATTCTCTTCGACAGGCAGAGACTTAGTCTACGGATTTTTGGTGCTTCTGAGAAGATAGCTGAAGCAGAGCAGAAGTTGATTCAATCCCTCCAGACAATTCATGAAAGCAAACAACTTGAGATTCACCTTCGAGGCAAATCCTTGCCTCCCAACCTCTTGAAGGCAGTGGTTGAGAAGTTCGGTCCAGATCTCAACGGCCTTAAACAGAAGTTTCCAGGGGCTGGATTTACATTAAATACACGGCGCCATATTTTATATGTCCAGGGTAGTAAGGATTTGAAGCAGGAAGTTGAAACTATCATTTTTGAGCTTGCAAAGATGAGTGGTGGTTCAGCCGAGAGGCCAGACGATGCAGATGCTTGTCCAATTTGCTTATGTGACATCGAAGACGACAGGTTTGAGCTGGAAGCCTGTGGGCACCATTTTTGCCGTCAATGCCTTGTGGAGCAGTTTGAGTCCGCCATAAAAAATCAGGGAAGATTCCCAGTATGTTGTGCCAAACAGAAATGTGAGTCTCCTATTTTACTTGCAGATATGAGAACTCTGTTGTCGAGTGAGAAGTTAGAGGAACTGTTCCGAGCTTCATTGGGAGCTTTCGTTGCTTCTAGTGATGGTGCCTATAGGTTTTGCCCGTCTCCCGACTGTCCCTCAGTTTACCGAGTGGCCAGCCCTGATATGTCTGGGGAACCATTTATGTGTGGAGCATGCTACTCAGAAACTTGTAATAGGTGCCATTTGGAGTATCATCCTTTCCTGTCATGCGAACAGTATCGAGTGTTTAAGGAAGACCCAGATTCGTCACTGAGTGAGTGGCGGAAAGATAAAGAGAATGTGAAGAACTGCCCGGTGTGCGGGTACACGATCGAGAAGATGGATGGGTGCAACCATGTTGAATGTAGGTGTGGAAGGCATATTTGTTGGGTGTGTTTGGAGTATTTTGGTAGCAGTGATGAATGCTATATCCATTTGAGGAGCATCCATATGACCATCGTTTGA

Protein sequence

MKSSSSTAFRPPDSSFRCTRASNLHYLPRSPNTGPSTPDYPAQFRKFSGQQTSPNRANFVIDLVLEHRGVLKSSVEDLIAKCNSKPDNFIVPHVGSVSAFMYFKQWVSALEAMVELWELRLDGLHGFTPILKPRINLPSDFDELHDRLRNLFAERIKRLMDGEKVRHWQNKCDLVMDEIDRILDMLRRPLRIATVFELKEKKKGLLIEKKSIMRKVEEFNSAMRYILDYVEGKKLESSDSHDLGFFTFDETINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQCQQVMVLVGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISAVSLAHRVREESRGCYDDDDYISCYPSFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIKYVPSSDEGTSSSGIVASYVTDVVRMSSEIHWQEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRTEPGRCYRLYTESEFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLNNKVYELTNEGCNLVKLGIEPRLGKLILSCFDCRVRREGVVLAVLMTNASSIFCRVGRVEDKLKSDCQKVQFCHADGDLFTLLSVYKQYEALPKEKKNKWCWENSINAKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNLKKCILASLAENVAMFTGYDRLGYEVALTGQHVQLHPSCSLLIFSERPKWVVFGEILSITNEYLVCVTAFDVDALLTLSPPPLFDISNMEQHRLEGRVLSGFGKTLLKRVCGKSNSNLLSLTSHVQKVFSDNCIGIEVNINQNEILLFSRTENMDKVCHFVNDILEYERKYLLNECMEKCLYHGNGGSTPVALLGAGAKIRHLELEKRYLTVYAYRSNVDIIDDKEFFMSLEKFVSGTVCAIQKVSCSGQDVDDKERGHRITFLTPDAAEKASKFDSDSFCGSLVKITPSQLTAGCDNKLFTFPPVKAKVFWPRRLSKGFAVVKCNIYDVGFILNDFSNLQIGDRFLRSEPSIKYSDCVTISGIDKELSEADILNVLRSVTDRKILDLFLVRENAVDNPPVHSCEEALLKEISPFMPKSNPHAKCCHVQVFPPQPKDFYMRAAINFDGRLHLEAAKALECLEGKALSVGELDEDYYSLVWSDSDDLESSCQPGVECTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIIDHASLTPTVLQHLTSRAGFDLINFLQRENGVYILFDRQRLSLRIFGASEKIAEAEQKLIQSLQTIHESKQLEIHLRGKSLPPNLLKAVVEKFGPDLNGLKQKFPGAGFTLNTRRHILYVQGSKDLKQEVETIIFELAKMSGGSAERPDDADACPICLCDIEDDRFELEACGHHFCRQCLVEQFESAIKNQGRFPVCCAKQKCESPILLADMRTLLSSEKLEELFRASLGAFVASSDGAYRFCPSPDCPSVYRVASPDMSGEPFMCGACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSLSEWRKDKENVKNCPVCGYTIEKMDGCNHVECRCGRHICWVCLEYFGSSDECYIHLRSIHMTIV

Homology

[Close]

BLAST of Lsi05G008150 vs. Swiss-Prot
Match: DEAHC_ARATH (ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana GN=At5g10370 PE=3 SV=1)

HSP 1 Score: 1845.5 bits (4779), Expect = 0.0e+00
Identity = 939/1719 (54.62%), Postives = 1230/1719 (71.55%), Query Frame = 1


Query: 29   RSPNTGPSTPDYPAQFRKFSGQQTSPNRANFVIDLVLEHRGVLKSSVEDLIAKCNSKPDN 88
            R+P++G S P   A+   F  Q   P  AN    L    +   K  +E L   C    ++
Sbjct: 67   RNPSSGYSPPVTRAR-PNFIVQLLHPAAANSDTKLCFSTK---KQEIESLALLCEIPEES 126

Query: 89   FIVPHVGSVSAFMYFKQWVSALEAMVELWELRLDGLHGFTPILKPRINLPSDFDELHDRL 148
              VP  G ++    F+QWV A  A+V LW+ RL G H F P L P + +PSD +EL DRL
Sbjct: 127  IHVPQFGCIAGSFSFRQWVDARSAVVALWDYRLQGKHEFVPELIPNVIVPSDMNELKDRL 186

Query: 149  RNLFAERIKRLMD-GEKVRHWQNKCDLVMDEIDR--ILDMLRRPLRIATVFELKEKKKGL 208
            R+LF+  I  LM+ GE V+    K  L ++E  R  +    +R L+    FE+ EKKK +
Sbjct: 187  RDLFSSHILSLMENGEGVK----KVRLEIEEKSRQVVSFSSKRGLK----FEVFEKKKAI 246

Query: 209  LIEKKSIMRKVEEFNSAMRYILDYVEGKK-----LESSDSHDLGFFTFDETINWNRIHSL 268
              E+  ++ ++EEFN+AM+ IL Y+ G+      L+  +  D+  F  +   +W RIH L
Sbjct: 247  EAERDLVVNRLEEFNNAMKSILRYLIGQDGYEFDLDDEEEGDVAVFCLEGAYDWRRIHCL 306

Query: 269  ILRECRRLEDGLPMYSCRQEILRQIQCQQVMVLVGETGSGKSTQLVQFLADSGLSASKSI 328
            I RECRRLEDGLP+Y+ R++IL++I  +Q+MVL+GETGSGKSTQLVQFLADSG++AS+SI
Sbjct: 307  IRRECRRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESI 366

Query: 329  VCTQPRKISAVSLAHRVREESRGCYDDDDYISCYPSFSSAQQFKSKIIYMTDHCLLQHYM 388
            VCTQPRKI+A++LA RVREES GCY+++  +SC P+FSS ++  SK++YMTD+CLLQHYM
Sbjct: 367  VCTQPRKIAAMTLADRVREESSGCYEENT-VSCTPTFSSTEEISSKVVYMTDNCLLQHYM 426

Query: 389  NDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSKYFFG 448
             D+ LS +SC+IIDEAHERSLNTDLLLALLK LL  RIDL L+IMSATA+A QLS+YFF 
Sbjct: 427  KDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFS 486

Query: 449  CGIFHVPGRNFPVDIKYVPSSDEGTSSSGIVASYVTDVVRMSSEIHWQEKGGTILAFLTS 508
            CGI  V GRNFPV+I Y PS  E  S  G +ASYV DVV+M+ EIH  EK GTILAFLTS
Sbjct: 487  CGILLVNGRNFPVEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTS 546

Query: 509  QMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRKVIFATNLAETSLTIPGVK 568
            Q EVEWACE F  P  + L  HGKLSF+EQFRVFQ+HPG+RKVIFATN+AETSLTIPGVK
Sbjct: 547  QAEVEWACERFITPSAIALPLHGKLSFEEQFRVFQNHPGRRKVIFATNIAETSLTIPGVK 606

Query: 569  YVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRTEPGRCYRLYTESEFELMS 628
            YVID G VK+SK+EP +GM+ILKVCR SQSSA QRAGRAGRTEPGRCYRLY++++F+ M+
Sbjct: 607  YVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDSMN 666

Query: 629  PNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLNNKV 688
             N EPEIR+VHLGVA+LR+LALGV N+ +F+FVDAP  EA+ MA++NLVQLGA+   N V
Sbjct: 667  LNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGV 726

Query: 689  YELTNEGCNLVKLGIEPRLGKLILSCFDCRVRREGVVLAVLMTNASSIFCRVGRVEDKLK 748
            +ELT EG  LVKLG+EP+LGKLIL CF  R+ +EG+VLA +M NASSIFCRVG  +DK+K
Sbjct: 727  HELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMK 786

Query: 749  SDCQKVQFCHADGDLFTLLSVYKQYEALPKEKKNKWCWENSINAKTMRRCQDAILELERC 808
            +D  KVQFC+ +GDLFTLLSVYK++ +LP+E++NKWCWENS+NAK+MRRC+D + ELE C
Sbjct: 787  ADRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEIC 846

Query: 809  LKQELHIIIPSYWLWSPLKPSDHDRNLKKCILASLAENVAMFTGYDRLGYEVALTGQHVQ 868
            +++EL ++ PSYW+W+P + + HD++LK  ILASLAENVAM+TGY++LGYEVALTGQ VQ
Sbjct: 847  IERELTLVSPSYWVWNPNEGTKHDKHLKMVILASLAENVAMYTGYNQLGYEVALTGQQVQ 906

Query: 869  LHPSCSLLIFSERPKWVVFGEILSITNEYLVCVTAFDVDALLTLSPPPLFDISNMEQHRL 928
            LHPSCSLL F ++P WVVFGE+LSI ++YLVCVTA D +AL  L PPP FD+S M++ RL
Sbjct: 907  LHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTACDFEALYMLDPPPPFDVSQMDERRL 966

Query: 929  EGRVLSGFGKTLLKRVCGKSNSNLLSLTSHVQKVFSDNCIGIEVNINQNEILLFSRTENM 988
              + + G   T+LKR CGKSN +LLS+ S  + + SD  IGI+V+++QNEI L++   +M
Sbjct: 967  RIKKVVGCSSTVLKRFCGKSNRSLLSIVSRARSLCSDERIGIQVDVDQNEIRLYAPPLDM 1026

Query: 989  DKVCHFVNDILEYERKYLLNECMEKCLYHGNGGSTPVALLGAGAKIRHLELEKRYLTVYA 1048
            +KV   VND LE E+K++ NEC+EK LYHG  G  P+AL G+GA+I+HLE+++R+LTV  
Sbjct: 1027 EKVSALVNDALECEKKWMHNECLEKYLYHGR-GQVPIALFGSGAQIKHLEVDQRFLTVDV 1086

Query: 1049 YRSNVDIIDDKEFFMSLEKFVSGTVCAIQKVSCSGQDVDDKERGHRITFLTPDAAEKASK 1108
                 D++DD+E    LEK + G++C+I K + + QD D+KE+  RITFLTP++A KA++
Sbjct: 1087 LYYGDDVVDDRELLTFLEKKIDGSICSIYKFAANKQDCDEKEKWGRITFLTPESAMKATE 1146

Query: 1109 FDSDSFCGSLVKITPSQLTAGCDNKLFTFPPVKAKVFWPRRLSKGFAVVKCNIYDVGFIL 1168
                 F GS++K+ PS  T G   K+  F  V AK+ WPRR S G   +KC   D+  IL
Sbjct: 1147 IQKFYFKGSVLKLFPSLSTGGGIFKMPYFSSVTAKIRWPRRESSGRGCLKCPSGDIHRIL 1206

Query: 1169 NDFSNLQIGDRFLRSEPSIKYSDCVTISGIDKELSEADILNVLRSVTDRKILDLFLVREN 1228
             D S+L+IG  ++  +   + +D + ISG+  +LSEA++L+VL   T R+ L+ F+ R+ 
Sbjct: 1207 GDISSLEIGTNYVHIQRDQQSNDSILISGLG-DLSEAEVLDVLEFRTQRRDLNFFIFRKK 1266

Query: 1229 -AVDNPPVHSCEEALLKEISPFMPKSNPHAKCCHVQVFPPQPKDFYMRAAINFDGRLHLE 1288
             +V  P   +CEE L K I   M   NP   C  VQVF P+  +++MRA I FDGRLH E
Sbjct: 1267 YSVQCPSPTACEEELHKRIFARMSAKNPEPNCVQVQVFEPKEDNYFMRALIKFDGRLHFE 1326

Query: 1289 AAKALECLEGKAL----------------SVGELDEDYYSLVWSDSDDL--ESSCQPGVE 1348
            AAKAL+ L G+ L                S        Y+ V    + L      Q G E
Sbjct: 1327 AAKALQELNGEVLPGCLPWQKIKCEQLFQSSIICSASIYNTVKRQLNVLLARFERQKGGE 1386

Query: 1349 CTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIIDHASLTPTVLQHLTSRAGFDL 1408
            C L    NG+YRVK++A AT+ VAE+RR +EELLRG+ I+H   T  VLQHL SR G +L
Sbjct: 1387 CCLEPTHNGAYRVKITAYATRPVAEMRRELEELLRGRPINHPGFTRRVLQHLMSRDGINL 1446

Query: 1409 INFLQRENGVYILFDRQRLSLRIFGASEKIAEAEQKLIQSLQTIHESKQLEIHLRGKSLP 1468
            +  +Q+E   YIL DR  L++RI G SEKIA+AEQ+LIQ+L   HESKQLEIHLRG  + 
Sbjct: 1447 MRKIQQETETYILLDRHNLTVRICGTSEKIAKAEQELIQALMDYHESKQLEIHLRGPEIR 1506

Query: 1469 PNLLKAVVEKFGPDLNGLKQKFPGAGFTLNTRRHILYVQGSKDLKQEVETIIFELAKMSG 1528
            P+L+K VV++FGP+L G+K+K  G    LNTR H++ V GSK+++QEV+ ++ ELA+   
Sbjct: 1507 PDLMKEVVKRFGPELQGIKEKVHGVDLKLNTRYHVIQVHGSKEMRQEVQKMVNELAREKS 1566

Query: 1529 GSAERPDDADA-CPICLCDIEDDRFELEACGHHFCRQCLVEQFESAIKNQGRFPVCCAKQ 1588
               E+PD+ +  CPICL ++ DD + LE C H FC+ CL+EQFE++++N   FP+ C+  
Sbjct: 1567 ALGEKPDEIEVECPICLSEV-DDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHI 1626

Query: 1589 KCESPILLADMRTLLSSEKLEELFRASLGAFVASSDGAYRFCPSPDCPSVYRVASPDMSG 1648
             C +PI+LADMR LLS EKL+ELF ASL +FV SSDG +RFC +PDCPSVYRVA P  SG
Sbjct: 1627 DCGAPIVLADMRALLSQEKLDELFSASLSSFVTSSDGKFRFCSTPDCPSVYRVAGPQESG 1686

Query: 1649 EPFMCGACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSLSEWRKDKENVKNCPVCGYTI 1708
            EPF+CGAC+SE C RCHLEYHP ++CE+Y+ FKE+PD SL +W K K NVK CP+C  TI
Sbjct: 1687 EPFICGACHSEICTRCHLEYHPLITCERYKKFKENPDLSLKDWAKGK-NVKECPICKSTI 1746

Query: 1709 EKMDGCNHVECRCGRHICWVCLEYFGSSDECYIHLRSIH 1720
            EK DGCNH++CRCG+HICW CL+ F   + CY HLR+IH
Sbjct: 1747 EKTDGCNHMKCRCGKHICWTCLDVFTQEEPCYAHLRTIH 1768

[Close]

BLAST of Lsi05G008150 vs. Swiss-Prot
Match: DEAHB_ARATH (ATP-dependent RNA helicase DEAH11, chloroplastic OS=Arabidopsis thaliana GN=At4g01020 PE=3 SV=1)

HSP 1 Score: 1841.6 bits (4769), Expect = 0.0e+00
Identity = 933/1749 (53.34%), Postives = 1236/1749 (70.67%), Query Frame = 1


Query: 3    SSSSTAFRPPDSSFRCTRASNLHYLPRSPNTGPSTPDYPAQFRKFSGQQTSPNRANFVID 62
            +S S    PP +   CT  +  H    + N  P+     A    FS   T   R NF++ 
Sbjct: 31   NSRSAQSSPPLN--HCTTWNQQHSQYHNTNFPPNYRRDRAPSSGFSPPVTRA-RPNFIVQ 90

Query: 63   LV------LEHRGVLKSSVEDLIAKCNSKPDNFIVPHVGSVSAFMYFKQWVSALEAMVEL 122
            L+       + +   K  +E +   C    ++  VP  G ++A   F+QWV A  A+V L
Sbjct: 91   LLHPAAANSDTKLSKKQEIESIALLCEIPEESVHVPQFGCIAASFSFRQWVDARSAVVAL 150

Query: 123  WELRLDGLHGFTPILKPRINLPSDFDELHDRLRNLFAERIKRLMD-GEKVRHWQNKCDLV 182
            W+ RL G H F P L P + +PSD DEL DRLR+LF+  +  LM+ G+ V+  + + D  
Sbjct: 151  WDYRLQGRHDFVPELIPNVVVPSDMDELKDRLRDLFSSHVLSLMENGQGVKKVRMEID-- 210

Query: 183  MDEIDRILDMLRRPLRIATVFELKEKKKGLLIEKKSIMRKVEEFNSAMRYILDYVEGKK- 242
                D+   +     +    FE+ EKKK L  E+  ++ +++EFN+AM+ IL Y+ G+  
Sbjct: 211  ----DKSRQVASFSSKRGLKFEVFEKKKALEAERDLVVNRLDEFNNAMKSILRYLIGQDG 270

Query: 243  ----LESSDSHDLGFFTFDETINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQCQQV 302
                ++  D  D+  F+ +   +W RIH LILRECRRLEDGLP+Y+ R++IL++I C+Q+
Sbjct: 271  YEFDVDDEDDEDVAVFSLEGAYDWRRIHYLILRECRRLEDGLPIYAYRRQILKKIHCEQI 330

Query: 303  MVLVGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISAVSLAHRVREESRGCYDDDDY 362
            MVL+GETGSGKSTQLVQFLADSG++AS+SIVCTQPRKI+A++L  RVREES GCY+++  
Sbjct: 331  MVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTLTDRVREESSGCYEENT- 390

Query: 363  ISCYPSFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALL 422
            +SC P+FSS ++  SK++YMTD+CLLQHYM D+ LS +SC+IIDEAHERSLNTDLLLALL
Sbjct: 391  VSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALL 450

Query: 423  KSLLMVRIDLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIKYVPSSDEGTSSSGI 482
            + LL  RIDL L+IMSATA+A+QLS+Y F CGI HV GRNFPV+I Y PS  E  S  G 
Sbjct: 451  RKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFPVEIVYSPSGTEENSVVGR 510

Query: 483  VASYVTDVVRMSSEIHWQEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQ 542
            +ASY  DVV+M+ EIH  EK GTILAFLTSQ EVEWACE F AP  + L  HGKLSF+EQ
Sbjct: 511  IASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFVAPSAIALPLHGKLSFEEQ 570

Query: 543  FRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQS 602
            F VFQ++PG+RKVIFATN+AETSLTIPGVKYVID G VK+SK+EP +GM+ILKVC+ SQS
Sbjct: 571  FMVFQNYPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQS 630

Query: 603  SANQRAGRAGRTEPGRCYRLYTESEFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDF 662
            SA QRAGRAGRTEPGRCYRLY++++F+ M+ N EPEIR+VHLGVA+LR+LALG+ N+  F
Sbjct: 631  SARQRAGRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRMLALGIDNIAAF 690

Query: 663  DFVDAPSAEAVDMAIRNLVQLGAITLNNKVYELTNEGCNLVKLGIEPRLGKLILSCFDCR 722
            +FVDAP  EA+ MAI+NLVQLGA+   N V ELT EG  LVKLG+EP+LGKLIL CF  R
Sbjct: 691  EFVDAPVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILGCFRHR 750

Query: 723  VRREGVVLAVLMTNASSIFCRVGRVEDKLKSDCQKVQFCHADGDLFTLLSVYKQYEALPK 782
            + +EG+VLA +M NASSIFCRVG  +DK+K+D  KVQFC+ +GDLFTLLSVYK++ +LP+
Sbjct: 751  MGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPR 810

Query: 783  EKKNKWCWENSINAKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNLKKC 842
            +++NKWCWENS+NAK+MRRC+D + ELE C+++EL ++ PSYW+W+P + + HD+ LK  
Sbjct: 811  DRRNKWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHDKYLKMV 870

Query: 843  ILASLAENVAMFTGYDRLGYEVALTGQHVQLHPSCSLLIFSERPKWVVFGEILSITNEYL 902
            ILASLAENVAM+TGYD+LGYEVALT Q VQLHPSCSLL F ++P WVVFGE+LSI ++YL
Sbjct: 871  ILASLAENVAMYTGYDQLGYEVALTSQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYL 930

Query: 903  VCVTAFDVDALLTLSPPPLFDISNMEQHRLEGRVLSGFGKTLLKRVCGKSNSNLLSLTSH 962
            VCVTAFD +AL  L PPP FD S M++ RL  + + G   T+LKR CGKSN +LLS+ S 
Sbjct: 931  VCVTAFDFEALYMLDPPPPFDASQMDERRLRVKKVVGCSSTVLKRFCGKSNRSLLSIVSR 990

Query: 963  VQKVFSDNCIGIEVNINQNEILLFSRTENMDKVCHFVNDILEYERKYLLNECMEKCLYHG 1022
             + + SD  IGI+V+++QNEI L++   +M+KV   VND LE E+K++ NEC+EK L+HG
Sbjct: 991  ARSLCSDERIGIQVDVDQNEIRLYASPLDMEKVSALVNDALECEKKWMRNECLEKYLFHG 1050

Query: 1023 NGGSTPVALLGAGAKIRHLELEKRYLTVYAYRSNVDIIDDKEFFMSLEKFVSGTVCAIQK 1082
              G  P+AL G+GA+I+HLE+++R+LTV  +    D++DD+E    LEK + G +C+I K
Sbjct: 1051 R-GQIPIALFGSGAQIKHLEVDQRFLTVDVHYYGDDVVDDRELLTFLEKKIDGCICSIYK 1110

Query: 1083 VSCSGQDVDDKERGHRITFLTPDAAEKASKFDSDSFCGSLVKITPSQLTAGCDNKLFTFP 1142
             + + QD D+KE+  RITFLTP++A KA++     F GS++K+ PS  T G   K+  F 
Sbjct: 1111 FAANKQDCDEKEKWGRITFLTPESAMKATEIQKFDFKGSVLKVFPSLSTGGGIFKMPYFS 1170

Query: 1143 PVKAKVFWPRRLSKGFAVVKCNIYDVGFILNDFSNLQIGDRFLRSEPSIKYSDCVTISGI 1202
             V AK+ WPR+ S G   +KC   D+  IL D ++L+IG  ++  +     +D + ISG+
Sbjct: 1171 SVTAKIRWPRKESSGRGCLKCPSGDIHSILGDITSLEIGTNYVHIQRDQLSNDSILISGL 1230

Query: 1203 DKELSEADILNVLRSVTDRKILDLFLVREN-AVDNPPVHSCEEALLKEISPFMPKSNPHA 1262
              +LSEA++L+VL   T R+ L+ F+ R+  +V  P   +CEE L K I   M   NP  
Sbjct: 1231 G-DLSEAEVLDVLEFRTQRRDLNFFIFRKKYSVQCPSPTACEEELHKRIFARMSAKNPEP 1290

Query: 1263 KCCHVQVFPPQPKDFYMRAAINFDGRLHLEAAKALECLEGKAL----------------S 1322
             C  VQVF P+  +++MRA I FDGRLHLEAAKAL+ L G+ L                S
Sbjct: 1291 NCVQVQVFEPKEDNYFMRALIKFDGRLHLEAAKALQELNGEVLPGCLPWQKIKCEQLFQS 1350

Query: 1323 VGELDEDYYSLVWSDSDDL--ESSCQPGVECTLSQNVNGSYRVKLSANATKTVAELRRPV 1382
                    Y+ V    + L      Q G EC L    NG+YRVK++A AT+ VAE+RR +
Sbjct: 1351 SIICSASIYNTVKRQLNVLLARFERQKGGECCLEPTHNGAYRVKITAYATRPVAEMRREL 1410

Query: 1383 EELLRGKIIDHASLTPTVLQHLTSRAGFDLINFLQRENGVYILFDRQRLSLRIFGASEKI 1442
            EELLRGK I+H   TP V+QHL SR G +L+  +Q+E   YIL DR  L++RI G SEKI
Sbjct: 1411 EELLRGKPINHPGFTPRVVQHLMSRDGINLMRKIQQETETYILLDRHNLTVRICGTSEKI 1470

Query: 1443 AEAEQKLIQSLQTIHESKQLEIHLRGKSLPPNLLKAVVEKFGPDLNGLKQKFPGAGFTLN 1502
            A+AEQ+L+QSL   HESKQLEIHLRG  + P+L+K VV++FGP+L G+K+K  G    LN
Sbjct: 1471 AKAEQELVQSLMDYHESKQLEIHLRGPEIRPDLMKEVVKRFGPELQGIKEKVHGVDLKLN 1530

Query: 1503 TRRHILYVQGSKDLKQEVETIIFELAKMSGGSAERPDDAD-ACPICLCDIEDDRFELEAC 1562
            TR H++ V GSK+++QEV+ ++ ELA+      E+PD+ +  CPICL ++ DD + LE C
Sbjct: 1531 TRYHVIQVHGSKEMRQEVQKMVNELAREKSALGEKPDEIELECPICLSEV-DDGYSLEGC 1590

Query: 1563 GHHFCRQCLVEQFESAIKNQGRFPVCCAKQKCESPILLADMRTLLSSEKLEELFRASLGA 1622
             H FC+ CL+EQFE++++N   FP+ C+   C +PI++ADMR LLS EKL+EL  ASL A
Sbjct: 1591 SHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVVADMRALLSQEKLDELISASLSA 1650

Query: 1623 FVASSDGAYRFCPSPDCPSVYRVASPDMSGEPFMCGACYSETCNRCHLEYHPFLSCEQYR 1682
            FV SSDG  RFC +PDCPS+YRVA P  SGEPF+CGAC+SETC RCHLEYHP ++CE+Y+
Sbjct: 1651 FVTSSDGKLRFCSTPDCPSIYRVAGPQESGEPFICGACHSETCTRCHLEYHPLITCERYK 1710

Query: 1683 VFKEDPDSSLSEWRKDKENVKNCPVCGYTIEKMDGCNHVECRCGRHICWVCLEYFGSSDE 1720
             FKE+PD SL +W K K+ VK CP+C  TIEK DGCNH++CRCG+HICW CL+ F  ++ 
Sbjct: 1711 KFKENPDLSLKDWAKGKD-VKECPICKSTIEKTDGCNHLQCRCGKHICWTCLDVFTQAEP 1765

[Close]

BLAST of Lsi05G008150 vs. Swiss-Prot
Match: DEAH5_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2)

HSP 1 Score: 406.4 bits (1043), Expect = 1.6e-111
Identity = 255/745 (34.23%), Postives = 416/745 (55.84%), Query Frame = 1


Query: 197  ELKEKKKGLLIEK--KSIMRKVEEF--NSAMRYILDYVEGKKLESSDSHDLGFFTFDETI 256
            E++E+++  +++   K + R  E+    +  R++   + G  L + D  +     F +T 
Sbjct: 439  EMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKTP 498

Query: 257  NWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQCQQVMVLVGETGSGKSTQLVQFLADS 316
             + +   L ++E R   + LP+Y  ++E+++ +   QV+V++GETGSGK+TQ+ Q+LA++
Sbjct: 499  TFGQRSKLSIQEQR---ESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA 558

Query: 317  GLSASKSIVCTQPRKISAVSLAHRVREESRGCYDDDDYISCYPSFSSAQQFKSKIIYMTD 376
            G +    I CTQPR+++A+S+A RV EE  GC   ++ +     F       + I YMTD
Sbjct: 559  GYTTKGKIGCTQPRRVAAMSVAKRVAEEF-GCRLGEE-VGYAIRFEDCTGPDTVIKYMTD 618

Query: 377  HCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANAD 436
              LL+  + D+ LS  S I++DEAHER+++TD+L  LLK L+  R+DL LI+ SAT +A+
Sbjct: 619  GMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAE 678

Query: 437  QLSKYFFGCGIFHVPGRNFPVDIKYVPSSDEGTSSSGIVASYVTDVVRMSSEIHWQEKGG 496
            + S YFF C IF +PGR FPV+I Y    +           Y+   +    +IH  E  G
Sbjct: 679  KFSGYFFNCNIFTIPGRTFPVEILYTKQPE---------TDYLDAALITVLQIHLTEPEG 738

Query: 497  TILAFLTSQMEVEWACENFH---------APGTVPLAFHGKLSFDEQFRVFQDHP-GKRK 556
             IL FLT Q E++ AC++ +          P  + L  +  L  + Q R+F   P GKRK
Sbjct: 739  DILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRK 798

Query: 557  VIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRT 616
            V+ ATN+AE SLTI G+ YV+DPG+ K + + P  G+  L +   SQ+SA QRAGRAGRT
Sbjct: 799  VVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRT 858

Query: 617  EPGRCYRLYTESEF-ELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAV 676
             PG+CYRLYTES +   M P   PEI++++LG+  L + A+G+ ++  FDF+D P  +A+
Sbjct: 859  GPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQAL 918

Query: 677  DMAIRNLVQLGAITLNNKVYELTNEGCNLVKLGIEPRLGKLILSCFDCRVRREGVVLAVL 736
              A+  L  LGA+   ++   LT  G  + +  +EP L K++L+  D     E ++  + 
Sbjct: 919  ISAMEQLYSLGAL---DEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDE-ILTMIA 978

Query: 737  MTNASSIFCRVGRVEDKLKSDCQKVQFCHADGDLFTLLSVYKQYEALPKEKKNKWCWENS 796
            M    +IF R    E + ++D ++ +F   +GD  TLL+VY+ ++A  K     WC+EN 
Sbjct: 979  MIQTGNIFYRPR--EKQAQADQKRAKFFQPEGDHLTLLAVYEAWKA--KNFSGPWCFENF 1038

Query: 797  INAKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNLKKCILASLAENVAM 856
            I ++++RR QD        ++++L  I+  Y L   +    +   ++K I A    + A 
Sbjct: 1039 IQSRSLRRAQD--------VRKQLLSIMDKYKL-DVVTAGKNFTKIRKAITAGFFFHGAR 1098

Query: 857  FTGYDRLGYEVALTGQHVQLHPSCSLLIFSERPKWVVFGEILSITNEYLVCVTAFDVDAL 916
                +  GY   +  Q V +HPS +L  F  +P WV++ +++  T EY+  VT  D   L
Sbjct: 1099 KDPQE--GYRTLVENQPVYIHPSSAL--FQRQPDWVIYHDLVMTTKEYMREVTVIDPKWL 1148

Query: 917  LTLSPP--PLFDISNMEQHRLEGRV 925
            + L+P    + D + M + + + R+
Sbjct: 1159 VELAPRFFKVSDPTKMSKRKRQERI 1148

[Close]

BLAST of Lsi05G008150 vs. Swiss-Prot
Match: MOG1_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2)

HSP 1 Score: 367.9 bits (943), Expect = 6.3e-100
Identity = 267/840 (31.79%), Postives = 428/840 (50.95%), Query Frame = 1


Query: 109  ALEAMVELWELRLDGLHGFTPILKPRINLPSDFDELHD--RLRNLFAERIKRLMDGEKVR 168
            A++   ELWE   + LH  + ++     L S F++  D  R+  L    +   +DG  V 
Sbjct: 277  AIKRENELWEN--NRLHR-SGVVAMADELSSIFEDETDENRVTILVQNIVPPFLDGRIV- 336

Query: 169  HWQNKCDLVMDEIDRILDMLRRPLRIATVFELKEKKKGLLIEKKSIMRKVEEFNSAMRYI 228
             +  +   ++  +D   DM     R +       +K+  + ++K    K  E   +    
Sbjct: 337  -FTKQAQPIIPVVDTTCDMAVSAARGSVAV----RKRREVEDRKKAQDKHWELAGSKLGN 396

Query: 229  LDYVEGKKLESSDSHDLGFFTFDETINWNRIHSL--------------ILRECRRLEDGL 288
            L  V+ KK E++D  D      D++ N+   H                + +  ++  + L
Sbjct: 397  LMGVKEKKDETADPED------DDSGNYKESHQFASHMKDNEAVSDFAMEKSIKQQREYL 456

Query: 289  PMYSCRQEILRQIQCQQVMVLVGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISAVS 348
            P+++CRQ+++  I+   V+++VGETGSGK+TQL Q+L + G   S  I CTQPR+++A+S
Sbjct: 457  PVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAMS 516

Query: 349  LAHRVREESRGCYDDDDYISCYPSFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCII 408
            +A RV +E       D  +     F      K+ I YMTD  LL+  + D  L   S II
Sbjct: 517  VARRVADEMGVDLGQD--VGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAII 576

Query: 409  IDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSKYFFG-CGIFHVPGRNF 468
            +DEAHERSLNTD+L  LL+ ++  R DL LI+ SAT +AD+ + +F G C  F +PGR F
Sbjct: 577  MDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTF 636

Query: 469  PVDIKYVPSSDEGTSSSGIVASYVTDVVRMSSEIHWQEKGGTILAFLTSQMEVEWACENF 528
            PV++ +  +          V  YV   V+ +  IH     G IL F+  Q ++E  CE  
Sbjct: 637  PVELFHARTP---------VEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMI 696

Query: 529  --------HAPGTVPLAFHGKLSFDEQFRVFQDHPG-KRKVIFATNLAETSLTIPGVKYV 588
                     AP    L  + +L  D Q ++FQ  PG  RK I ATN+AETSLT+ G+ +V
Sbjct: 697  KEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFV 756

Query: 589  IDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRTEPGRCYRLYTESEF-ELMSP 648
            IDPG+ K   + P  GM+ L +   SQ+SANQR GRAGRT PG+CYRLYTE +F + +  
Sbjct: 757  IDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLK 816

Query: 649  NHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLNNKVY 708
            +  PEI++ +L   +L + +LGV ++  F F+DAP  + +  ++  L  LGA+   +   
Sbjct: 817  STVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGAL---DNTG 876

Query: 709  ELTNEGCNLVKLGIEPRLGKLILSCFDCRVRREGVVLAVLMTNASSIFCRVGRVEDKLKS 768
            +LT  G  +V+  ++P L K+++   +     E + +  +++  +  F   GR E+   +
Sbjct: 877  QLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEE---A 936

Query: 769  DCQKVQFCHADGDLFTLLSVYKQYEALPKEKKNKWCWENSINAKTMRRCQDAILELERCL 828
            D +K +F   + D  T L+VY Q+     +   KWC +N ++ K +++ ++   +L+  +
Sbjct: 937  DAKKEKFQVPESDHLTFLNVYIQWRT--HKYSAKWCADNYLHVKALKKVREVRAQLKE-I 996

Query: 829  KQELHIIIPSYWLWSPLKPSDHDRNLKKCILASLAENVAMFTGYDRLGYEVALTGQHVQL 888
             Q+L + + S         S+ D  ++KCI ++   N A   G     Y    TG    L
Sbjct: 997  MQDLKLPLIS-------NGSEWD-IVRKCICSAYFHNAARLKGIGE--YVNVRTGIPCFL 1056

Query: 889  HPSCSLLIFSERPKWVVFGEILSITNEYLVCVTAFDVDALLTLSPPPLFDISNMEQHRLE 922
            HP+ +L      P +VV+ E++    EY+ CVTA D   L  L  P  + I   +Q R E
Sbjct: 1057 HPTSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELG-PMFYSIKESKQSRKE 1070

[Close]

BLAST of Lsi05G008150 vs. Swiss-Prot
Match: DHX16_PIG (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Sus scrofa GN=DHX16 PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 4.2e-96
Identity = 225/648 (34.72%), Postives = 357/648 (55.09%), Query Frame = 1


Query: 272  LPMYSCRQEILRQIQCQQVMVLVGETGSGKSTQLVQFLADSGLSAS-KSIVCTQPRKISA 331
            LP++  R+E+L  +   Q++++ GETGSGK+TQ+ Q+L + G +     I CTQPR+++A
Sbjct: 403  LPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVAA 462

Query: 332  VSLAHRVREESRGCYDDDDYISCYPSFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSC 391
            +S+A RV  E      ++   S    F      ++ + YMTD  LL+ ++++  L+  S 
Sbjct: 463  MSVAARVAREMGVKLGNEVGYSI--RFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSV 522

Query: 392  IIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSKYFFGCGIFHVPGRN 451
            +++DEAHER+L+TD+L  L+K +   R +L +++ SAT +  + S +F    +F +PGR 
Sbjct: 523  VMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRR 582

Query: 452  FPVDIKYVPSSDEGTSSSGIVASYVTDVVRMSSEIHWQEKGGTILAFLTSQMEVEWACEN 511
            FPVDI Y  + +         A Y+   V    +IH  +  G IL FLT Q E+E ACE 
Sbjct: 583  FPVDIFYTKAPE---------ADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEM 642

Query: 512  FH---------APGTVPLAFHGKLSFDEQFRVFQDHP-GKRKVIFATNLAETSLTIPGVK 571
                           + L  +  L  D Q R+FQ  P G RKV+ ATN+AETSLTI G+ 
Sbjct: 643  LQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGII 702

Query: 572  YVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRTEPGRCYRLYTESEFE-LM 631
            YV+DPG+ K   + P +GM  L V   S++SANQRAGRAGR   G+C+RLYT   ++  +
Sbjct: 703  YVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHEL 762

Query: 632  SPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLNNK 691
                 PEI++  LG  +L + +LG+ ++  FDF+D P  E + +A+  L  LGA+   N 
Sbjct: 763  EETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGAL---NH 822

Query: 692  VYELTNEGCNLVKLGIEPRLGKLILSCFDCRVRREGVVLAVLMTNASSIFCRVGRVEDK- 751
            + ELT  G  + +L ++P L K+IL+        E + +A +++  +SIF    R +DK 
Sbjct: 823  LGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFY---RPKDKV 882

Query: 752  LKSDCQKVQFCHADGDLFTLLSVYKQYEALPKEKKNKWCWENSINAKTMRRCQDAILELE 811
            + +D  +V F    GD   LL+VY Q+        ++WC+EN +  ++MRR +D   +LE
Sbjct: 883  VHADNARVNFFLPGGDHLVLLNVYTQW--AESGYSSQWCYENFVQFRSMRRARDVREQLE 942

Query: 812  RCLKQELHIIIPSYWLWSPLKPSDHDRNLKKCILASLAENVAMFTGYDRLGYEVALTGQH 871
              L + + + + S          D+ R ++K I A    + A  T   R GY      Q 
Sbjct: 943  GLL-ERVEVGLSSC-------QGDYIR-VRKAITAGYFYHTARLT---RSGYRTVKQQQT 1002

Query: 872  VQLHPSCSLLIFSERPKWVVFGEILSITNEYLVCVTAFDVDALLTLSP 907
            V +HP+ SL  F E+P+W+++ E++  T E++  V   +   LL ++P
Sbjct: 1003 VFIHPNSSL--FEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAP 1017

[Close]

BLAST of Lsi05G008150 vs. TrEMBL
Match: A0A0A0KVR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097700 PE=4 SV=1)

HSP 1 Score: 3092.4 bits (8016), Expect = 0.0e+00
Identity = 1528/1739 (87.87%), Postives = 1598/1739 (91.89%), Query Frame = 1


Query: 3    SSSSTAFRPPDSSFRCTRASNLHYLPRSPNTGPSTPDYPAQFRKFSGQQTSPNRANFVID 62
            SSSSTA RPPDSSFR  R SNLHYLPRSPN      D+P+   KFS QQ  PNRANF ID
Sbjct: 4    SSSSTASRPPDSSFRTIRPSNLHYLPRSPNAS----DFPS---KFSAQQNCPNRANFAID 63

Query: 63   LVLEHRGVLKSSVEDLIAKCNSKPDNFIVPHVGSVSAFMYFKQWVSALEAMVELWELRLD 122
            LVLEHR + K SVE LIAKC SKPDN+I+P VGSV+AF++FKQWVSALE MV LWELRL 
Sbjct: 64   LVLEHRTLSKCSVELLIAKCISKPDNYIIPQVGSVAAFLFFKQWVSALEYMVALWELRLT 123

Query: 123  GLHGFTPILKPRINLPSDFDELHDRLRNLFAERIKRLMDGEKVRHWQNKCDLVMDEIDRI 182
            G H FTPILKPRINLPSD DELH+RL+NLFAERIK LMDG+KVRHWQNK DLVM +I+RI
Sbjct: 124  GFHDFTPILKPRINLPSDVDELHERLQNLFAERIKLLMDGDKVRHWQNKYDLVMVQINRI 183

Query: 183  LDMLRRPLRIATVFELKEKKKGLLIEKKSIMRKVEEFNSAMRYILDYVEGKKLESSDSHD 242
             D LRRPLRI   F+L EKKKGLL+EK+SI+RK+EEFNSAMRYILD+VEGKKLE+SDSH 
Sbjct: 184  SDTLRRPLRIDAAFKLNEKKKGLLVEKESIVRKMEEFNSAMRYILDHVEGKKLETSDSHG 243

Query: 243  LGFFTFDETINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQCQQVMVLVGETGSGKS 302
            +G FTFD TINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQ QQVMVL+GETGSGKS
Sbjct: 244  MGIFTFDGTINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQYQQVMVLIGETGSGKS 303

Query: 303  TQLVQFLADSGLSASKSIVCTQPRKISAVSLAHRVREESRGCYDDDDYISCYPSFSSAQQ 362
            TQLVQFLADSGLS SKSIVCTQPRKISAVSLAHRV EESRGCY+DDDY+SCYPSFSSAQQ
Sbjct: 304  TQLVQFLADSGLSGSKSIVCTQPRKISAVSLAHRVSEESRGCYNDDDYMSCYPSFSSAQQ 363

Query: 363  FKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHL 422
            FKSKIIYMTDHCLLQHYMNDKKLS VS IIIDEAHERSL+TDLLLALLKSLLMVRIDLHL
Sbjct: 364  FKSKIIYMTDHCLLQHYMNDKKLSGVSYIIIDEAHERSLSTDLLLALLKSLLMVRIDLHL 423

Query: 423  IIMSATANADQLSKYFFGCGIFHVPGRNFPVDIKYVPSSDEGTSSSGIVASYVTDVVRMS 482
            IIMSATANADQLSKYFF CGIF VPGR+FPVDIKYVPSS+EG S S IV SYV DVVRM+
Sbjct: 424  IIMSATANADQLSKYFFRCGIFRVPGRSFPVDIKYVPSSNEGISGSCIVPSYVNDVVRMA 483

Query: 483  SEIHWQEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRK 542
             EIHWQEK G ILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRK
Sbjct: 484  YEIHWQEKEGAILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRK 543

Query: 543  VIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRT 602
            VIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRT
Sbjct: 544  VIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRT 603

Query: 603  EPGRCYRLYTESEFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVD 662
            EPGRCYRLYTESEFELMSPNHEPEIRKVHLG+AILRILALGVKNVDDFDFVDAPSAEAVD
Sbjct: 604  EPGRCYRLYTESEFELMSPNHEPEIRKVHLGIAILRILALGVKNVDDFDFVDAPSAEAVD 663

Query: 663  MAIRNLVQLGAITLNNKVYELTNEGCNLVKLGIEPRLGKLILSCFDCRVRREGVVLAVLM 722
            MAIRNLVQLGAITLNNKVYELTNEG NLVKLGIEPRLGKLILSCFDCRVRREGVVL+VLM
Sbjct: 664  MAIRNLVQLGAITLNNKVYELTNEGRNLVKLGIEPRLGKLILSCFDCRVRREGVVLSVLM 723

Query: 723  TNASSIFCRVGRVEDKLKSDCQKVQFCHADGDLFTLLSVYKQYEALPKEKKNKWCWENSI 782
            TNASSIFCRVGRVEDKLKSDCQKVQFCH DGDLFTLLSVYKQYEALPKE+KN+WCWENSI
Sbjct: 724  TNASSIFCRVGRVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPKERKNRWCWENSI 783

Query: 783  NAKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNLKKCILASLAENVAMF 842
            NAKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRN+KKCIL SLAENVAMF
Sbjct: 784  NAKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNIKKCILGSLAENVAMF 843

Query: 843  TGYDRLGYEVALTGQHVQLHPSCSLLIFSERPKWVVFGEILSITNEYLVCVTAFDVDALL 902
            TGYDRLGYEVA+TGQHVQLHPSCSLLIFSERPKWVVFGEILSI NEYLVCVTAFD D LL
Sbjct: 844  TGYDRLGYEVAMTGQHVQLHPSCSLLIFSERPKWVVFGEILSIFNEYLVCVTAFDADDLL 903

Query: 903  TLSPPPLFDISNMEQHRLEGRVLSGFGKTLLKRVCGKSNSNLLSLTSHVQKVFSDNCIGI 962
            TLSPPPLF+ISNME+HRLEGRVLSGFGKT+LKRVCGKSNSNLLSLT+HV+KVFSDNCIGI
Sbjct: 904  TLSPPPLFNISNMEKHRLEGRVLSGFGKTVLKRVCGKSNSNLLSLTAHVRKVFSDNCIGI 963

Query: 963  EVNINQNEILLFSRTENMDKVCHFVNDILEYERKYLLNECMEKCLYHGNGGSTPVALLGA 1022
            EVNINQNE++LFSRTENMD+VCHFVND+LEYERKYLLNECMEKCLYHGNGGSTPVALLGA
Sbjct: 964  EVNINQNEVMLFSRTENMDEVCHFVNDVLEYERKYLLNECMEKCLYHGNGGSTPVALLGA 1023

Query: 1023 GAKIRHLELEKRYLTVYAYRSNVDIIDDKEFFMSLEKFVSGTVCAIQKVSCSGQDVDDKE 1082
            GAKIRHLELEKRYLTVYA   NVD IDDKEFF SLE FVSGT+C IQKV  SG DVD+KE
Sbjct: 1024 GAKIRHLELEKRYLTVYALCLNVDSIDDKEFFTSLENFVSGTICGIQKVPNSGHDVDNKE 1083

Query: 1083 RGHRITFLTPDAAEKASKFDSDSFCGSLVKITPSQLTAGCDNKLFTFPPVKAKVFWPRRL 1142
            RG+RITFLTPDAAEKASK D DSFCGSL+KI PS+LTAGCDNK+FTFPPVKAKVFWPRRL
Sbjct: 1084 RGYRITFLTPDAAEKASKIDCDSFCGSLMKIIPSRLTAGCDNKMFTFPPVKAKVFWPRRL 1143

Query: 1143 SKGFAVVKCNIYDVGFILNDFSNLQIGDRFLRSEPSIKYSDCVTISGIDKELSEADILNV 1202
            SKGFAVVKCNI DVGF+LNDFS+L IG RFLR EPSIKY+DCVTISGIDKELSEADILNV
Sbjct: 1144 SKGFAVVKCNINDVGFVLNDFSSLLIGGRFLRCEPSIKYNDCVTISGIDKELSEADILNV 1203

Query: 1203 LRSVTDRKILDLFLVRENAVDNPPVHSCEEALLKEISPFMPKSNPHAKCCHVQVFPPQPK 1262
            LR+ TDRKILDLFLVRENAVDNPPV+SCEE+LLKEISPFMPK NPH KCC VQVFPPQPK
Sbjct: 1204 LRTTTDRKILDLFLVRENAVDNPPVNSCEESLLKEISPFMPKLNPHVKCCRVQVFPPQPK 1263

Query: 1263 DFYMRAAINFDGRLHLEAAKALECLEGKALSVG----------------ELDEDYYSLVW 1322
            DFYM+A I FDGRLHLEAAKALE LEGKAL V                     D Y ++ 
Sbjct: 1264 DFYMKAVITFDGRLHLEAAKALEFLEGKALPVCLPWQKIKCQQLFHSTLSCTIDIYRVIK 1323

Query: 1323 SDSDDLESSCQ--PGVECTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIIDHAS 1382
               D L  S +   GVECTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIID AS
Sbjct: 1324 HQLDSLLESFRRIDGVECTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIIDDAS 1383

Query: 1383 LTPTVLQHLTSRAGFDLINFLQRENGVYILFDRQRLSLRIFGASEKIAEAEQKLIQSLQT 1442
            LTP VLQHLTSR GFDLIN LQRENGVYILFDRQRLSLRIFGASEK+A AE+KLIQSLQ 
Sbjct: 1384 LTPAVLQHLTSRDGFDLINLLQRENGVYILFDRQRLSLRIFGASEKMAAAERKLIQSLQL 1443

Query: 1443 IHESKQLEIHLRGKSLPPNLLKAVVEKFGPDLNGLKQKFPGAGFTLNTRRHILYVQGSKD 1502
            IHESKQLEIHLRGKS PPNLLKAVVEKFGPDLN LKQKFPGAGFTLNTRRHILYVQGSKD
Sbjct: 1444 IHESKQLEIHLRGKSWPPNLLKAVVEKFGPDLNALKQKFPGAGFTLNTRRHILYVQGSKD 1503

Query: 1503 LKQEVETIIFELAKMSGGSAERPDDADACPICLCDIEDDRFELEACGHHFCRQCLVEQFE 1562
            LKQEVET+IFELA +SGGS ERPDDAD CPICLCDIEDDRFELE CGHHFCRQCLVEQFE
Sbjct: 1504 LKQEVETVIFELATISGGSGERPDDADCCPICLCDIEDDRFELEVCGHHFCRQCLVEQFE 1563

Query: 1563 SAIKNQGRFPVCCAKQKCESPILLADMRTLLSSEKLEELFRASLGAFVASSDGAYRFCPS 1622
            SAIKNQGRFP+CCAKQKC +PI+LADMRTLLSSEKLEELFRASLGAF+ASSDGAYRFCPS
Sbjct: 1564 SAIKNQGRFPICCAKQKCGTPIVLADMRTLLSSEKLEELFRASLGAFIASSDGAYRFCPS 1623

Query: 1623 PDCPSVYRVASPDMSGEPFMCGACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSLSEWR 1682
            PDCPSVYRVA PDM GEPF+CGACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSL EWR
Sbjct: 1624 PDCPSVYRVARPDMPGEPFVCGACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSLKEWR 1683

Query: 1683 KDKENVKNCPVCGYTIEKMDGCNHVECRCGRHICWVCLEYFGSSDECYIHLRSIHMTIV 1724
            K KENVKNCPVCGYTIEK +GCNHVECRCGRHICWVCLEYFGSSDECY HL S+HMTIV
Sbjct: 1684 KGKENVKNCPVCGYTIEKTEGCNHVECRCGRHICWVCLEYFGSSDECYAHLGSVHMTIV 1735

[Close]

BLAST of Lsi05G008150 vs. TrEMBL
Match: A0A061DJ84_THECC (Helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related, putative isoform 1 OS=Theobroma cacao GN=TCM_001034 PE=4 SV=1)

HSP 1 Score: 2168.7 bits (5618), Expect = 0.0e+00
Identity = 1054/1691 (62.33%), Postives = 1308/1691 (77.35%), Query Frame = 1


Query: 56   RANFVIDLVLEHRGVLKSSVEDL---IAKCNSKPDNFIVPHVGSVSAFMYFKQWVSALEA 115
            R NF I L+++      +   DL   I++ N  P+N  +   G  +A ++F++W+  L +
Sbjct: 70   RPNFTILLLVDSSSSSPAKPNDLQTLISQLNPAPENSRIHPTGKTAASLFFREWIHTLSS 129

Query: 116  MVELWELRLDGLHGFTPILKPRINLPSDFDELHDRLRNLFAERIKRLMDGEKVRHWQNKC 175
            ++ LW  RLDG H FTP L   + + SD  EL   L+ LF+  IK LM+GE V+ W+ K 
Sbjct: 130  ILSLWRSRLDGSHHFTPNLICNVRVASDMVELKQNLKTLFSNHIKGLMEGELVKKWKEKI 189

Query: 176  DLVMDEI-DRILDMLRRPLRIATVFELKEKKKGLLIEKKSIMRKVEEFNSAMRYILDYVE 235
            +   DEI D      +R       FEL +KKKGL+ E+  I ++++EF   MR +L  +E
Sbjct: 190  EEKSDEIADVAAQTGKRHCSRGRFFELNDKKKGLMAERSMISKRLKEFKGGMRSLLGCLE 249

Query: 236  GKKLESSDSHD-LGFFTFDETINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQCQQV 295
               + + +  D +  F FD  ++W RIH LILRECRRLEDGLP+Y+ RQEIL +I  +Q+
Sbjct: 250  DGVIGNVEEGDGVEVFRFDGELDWERIHRLILRECRRLEDGLPIYAHRQEILTRIHGEQI 309

Query: 296  MVLVGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISAVSLAHRVREESRGCYDDDDY 355
            MVL+GETGSGKSTQLVQFL DS ++A++SIVCTQPRKI+A+SLA RVREES GCYDD+  
Sbjct: 310  MVLIGETGSGKSTQLVQFLTDSAIAANESIVCTQPRKIAAISLAERVREESIGCYDDNSV 369

Query: 356  ISCYPSFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALL 415
            + CYP+FSSAQQF SK+IYMTDHCLLQHYMND+ LS +SCII+DEAHERSLNTDLLLAL+
Sbjct: 370  V-CYPTFSSAQQFDSKVIYMTDHCLLQHYMNDRNLSGISCIIVDEAHERSLNTDLLLALV 429

Query: 416  KSLLMVRIDLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIKYVPSSDEGTSSSGI 475
            K LL  R++L L+IMSATANA+QLS YFFGCGIFHV GR+F VDIKYVP + EGTS S +
Sbjct: 430  KDLLCRRLELRLVIMSATANANQLSDYFFGCGIFHVMGRHFSVDIKYVPCATEGTSGSSM 489

Query: 476  VASYVTDVVRMSSEIHWQEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQ 535
            VASYV+DV RM++E+H  EK GTILAFLTSQMEVEWAC+NF A   V L  HGKLSF+EQ
Sbjct: 490  VASYVSDVTRMAAEVHKTEKEGTILAFLTSQMEVEWACDNFEASNAVALPLHGKLSFEEQ 549

Query: 536  FRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQS 595
            F VFQ++PGKRKV+FATN+AETSLTIPGVKYVID G VK+SKFEPG+GMN+L+VC  SQS
Sbjct: 550  FHVFQNYPGKRKVVFATNIAETSLTIPGVKYVIDSGMVKESKFEPGTGMNVLRVCWISQS 609

Query: 596  SANQRAGRAGRTEPGRCYRLYTESEFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDF 655
            SANQRAGRAGRTEPGRCYRLYT + FELM PN EPEIR+VHLGVA+LRILALG+KNV  F
Sbjct: 610  SANQRAGRAGRTEPGRCYRLYTANNFELMPPNQEPEIRRVHLGVAVLRILALGIKNVQSF 669

Query: 656  DFVDAPSAEAVDMAIRNLVQLGAITLNNKVYELTNEGCNLVKLGIEPRLGKLILSCFDCR 715
            DFVDAPS++A+DMAIRNL+QLGAI   N V ELT++G  LVKLGIEPRLGKLILSCF CR
Sbjct: 670  DFVDAPSSKAIDMAIRNLIQLGAIVQKNGVLELTDDGRYLVKLGIEPRLGKLILSCFHCR 729

Query: 716  VRREGVVLAVLMTNASSIFCRVGRVEDKLKSDCQKVQFCHADGDLFTLLSVYKQYEALPK 775
            +RREG+VLA +M NASSIFCRVG   DK+K+DC KVQFCH +GDLFTLLSVYK++EALP 
Sbjct: 730  LRREGLVLAAVMANASSIFCRVGNEGDKVKADCLKVQFCHQNGDLFTLLSVYKEWEALPH 789

Query: 776  EKKNKWCWENSINAKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNLKKC 835
             +KNKWCWENSINAK+MRRCQD + ELE CL++EL +IIPS+ LW P K ++HD+ LK  
Sbjct: 790  NRKNKWCWENSINAKSMRRCQDTVTELEICLQKELSVIIPSFLLWDPHKSTEHDKFLKAI 849

Query: 836  ILASLAENVAMFTGYDRLGYEVALTGQHVQLHPSCSLLIFSERPKWVVFGEILSITNEYL 895
            IL+SLAENVAM++GYD+LGYEVALTGQHVQLHPSCSLLIF ++P WVVFGE+LSITN+YL
Sbjct: 850  ILSSLAENVAMYSGYDQLGYEVALTGQHVQLHPSCSLLIFGQKPSWVVFGELLSITNQYL 909

Query: 896  VCVTAFDVDALLTLSPPPLFDISNMEQHRLEGRVLSGFGKTLLKRVCGKSNSNLLSLTSH 955
            VCVTAFD ++L TL PPPLFD S ME  +L+ + ++GFG TLLK+ CGKSN NL SL S 
Sbjct: 910  VCVTAFDFESLATLDPPPLFDASRMESRKLQVKAMTGFGSTLLKKFCGKSNHNLRSLVSR 969

Query: 956  VQKVFSDNCIGIEVNINQNEILLFSRTENMDKVCHFVNDILEYERKYLLNECMEKCLYHG 1015
            ++    D  IG+EVN++QNEILLF+ + +M KV  FVN++LE ERK+LLNECMEKCL+HG
Sbjct: 970  LRTACMDERIGVEVNVDQNEILLFASSMDMQKVLAFVNEVLECERKWLLNECMEKCLFHG 1029

Query: 1016 NGGSTPVALLGAGAKIRHLELEKRYLTVYAYRSNVDIIDDKEFFMSLEKFVSGTVCAIQK 1075
             G S  +AL GAGA+I+HLE++KR LT+  + SNV+ ++DK   M  EK+ +G++C++ K
Sbjct: 1030 QGASPSMALFGAGAEIKHLEVDKRCLTLDVFHSNVNDLEDKGLLMLFEKYSNGSICSVHK 1089

Query: 1076 VSCSGQDVDDKERGHRITFLTPDAAEKASKFDSDSFCGSLVKITPSQLTAGCDNKLFTFP 1135
               SG + DDKE+  +ITFL PDAA KA++ D   F GS +K+ PS+ + G D+K+F+FP
Sbjct: 1090 SQASGHESDDKEKWGKITFLNPDAARKAAELDGVDFAGSALKVLPSRTSFGADHKMFSFP 1149

Query: 1136 PVKAKVFWPRRLSKGFAVVKCNIYDVGFILNDFSNLQIGDRFLRSEPSIKYSDCVTISGI 1195
             VKAKV WPRR SKGF +VKC++ D+GFI++DFS+L IG + +R E S K  D + I GI
Sbjct: 1150 AVKAKVCWPRRPSKGFGIVKCDLLDIGFIIDDFSSLVIGGKNVRCEVSRKSVDAIVIYGI 1209

Query: 1196 DKELSEADILNVLRSVTDRKILDLFLVRENAVDNPPVHSCEEALLKEISPFMPKSNPHAK 1255
            DKELSEA++ + L++ T RKI D FLVR +AV+NP   +CEEAL +EISPFMPK NPHA 
Sbjct: 1210 DKELSEAEVWDELQTATKRKIHDFFLVRGDAVENPTCSACEEALHREISPFMPKRNPHAN 1269

Query: 1256 CCHVQVFPPQPKDFYMRAAINFDGRLHLEAAKALECLEGKAL----------------SV 1315
            CC VQVF P+PK+ +M+A I FDGRLHLEAAKALE LEGK L                S 
Sbjct: 1270 CCWVQVFQPEPKESFMKALITFDGRLHLEAAKALEQLEGKVLPGCLSWQKIRCQQLFHSS 1329

Query: 1316 GELDEDYYSLVWSDSDDLESSCQ--PGVECTLSQNVNGSYRVKLSANATKTVAELRRPVE 1375
                   Y+++    D L +S +   G  C L  N NGSYRV++SANATKTVAELRRPVE
Sbjct: 1330 ISCSSSVYAVIRKQLDSLLASFRHLKGAGCYLEANGNGSYRVRISANATKTVAELRRPVE 1389

Query: 1376 ELLRGKIIDHASLTPTVLQHLTSRAGFDLINFLQRENGVYILFDRQRLSLRIFGASEKIA 1435
            EL+ GK + HASLTP++LQHL SR G + +  LQ+E G YI FDR  L++RIFG+ +  A
Sbjct: 1390 ELMNGKTVKHASLTPSILQHLFSRDGINQMRSLQQETGTYIFFDRHSLNIRIFGSPDNAA 1449

Query: 1436 EAEQKLIQSLQTIHESKQLEIHLRGKSLPPNLLKAVVEKFGPDLNGLKQKFPGAGFTLNT 1495
             A+QKLIQSL   HESKQLE+ LRG+ LPP+L+K VV+KFGPDL+GLK+K PGA F L+T
Sbjct: 1450 VAQQKLIQSLLLYHESKQLEVKLRGRGLPPDLMKEVVKKFGPDLHGLKEKIPGAEFALST 1509

Query: 1496 RRHILYVQGSKDLKQEVETIIFELAKMSGGSAERPDDADACPICLCDIEDDRFELEACGH 1555
            R H++ ++G K++K++VE I+ E+ +     AER D    CPICLC++ED  ++LE C H
Sbjct: 1510 RHHVISIRGDKEMKRKVEEIVLEIVETGKHLAERSDSEVTCPICLCEVEDG-YQLEGCSH 1569

Query: 1556 HFCRQCLVEQFESAIKNQGRFPVCCAKQKCESPILLADMRTLLSSEKLEELFRASLGAFV 1615
             FCR CLVEQ ESAIKN   FP+CCA Q C++PILL D+++LLS+EKLEELFRASLGAFV
Sbjct: 1570 FFCRLCLVEQCESAIKNLDSFPICCAYQGCKAPILLTDLKSLLSTEKLEELFRASLGAFV 1629

Query: 1616 ASSDGAYRFCPSPDCPSVYRVASPDMSGEPFMCGACYSETCNRCHLEYHPFLSCEQYRVF 1675
            ASS G YRFCPSPDCPSVYRVA P+  GEPF+CGACY+ETC +CHLEYHP+LSCE+Y+ F
Sbjct: 1630 ASSRGTYRFCPSPDCPSVYRVADPETFGEPFVCGACYAETCIKCHLEYHPYLSCEKYKEF 1689

Query: 1676 KEDPDSSLSEWRKDKENVKNCPVCGYTIEKMDGCNHVECRCGRHICWVCLEYFGSSDECY 1724
            KEDPDSSL EW K KE VK CPVCGYT+EK+DGCNHVEC+CGRH+CWVCLE+F SSD+CY
Sbjct: 1690 KEDPDSSLKEWCKGKEQVKTCPVCGYTVEKIDGCNHVECKCGRHVCWVCLEFFSSSDDCY 1749

[Close]

BLAST of Lsi05G008150 vs. TrEMBL
Match: V4RXD4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024688mg PE=4 SV=1)

HSP 1 Score: 2139.4 bits (5542), Expect = 0.0e+00
Identity = 1062/1711 (62.07%), Postives = 1318/1711 (77.03%), Query Frame = 1


Query: 38   PDYPAQFRKFSGQQTSPNRA--NFVIDLVLEHRGVLKSSVEDLIAKCNSKPDNFIVPHVG 97
            P  P   ++ S   TSP     NF+I L      +    ++ L++K +   ++  V   G
Sbjct: 26   PKIPPNQKRHSPSATSPPLPCPNFIIQLRSSTPAISGQELKALLSKLSLSCEHVAVSPSG 85

Query: 98   SVSAFMYFKQWVSALEAMVELWELRLDGLHGFTPILKPRINLPSDFDELHDRLRNLFAER 157
             + A +YF QWV  L AMV LWE RL+G H     L P + +PSD DEL +RLRNLF + 
Sbjct: 86   PLIASLYFNQWVDTLNAMVGLWESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDH 145

Query: 158  IKRLMDGEKVRHWQNKCDLVMDEIDRILDMLRRPLRIATVFELKEKKKGLLIEKKSIMRK 217
            +K LM+GE V  W    D   DEI  + + L      A   EL E+KKGL  E++ IMR+
Sbjct: 146  VKGLMEGELVNKWLKMKDDKCDEIANVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRR 205

Query: 218  VEEFNSAMRYILDYVEGK----KLESSDSH-DLGFFTFDETINWNRIHSLILRECRRLED 277
            V EF + M  +L Y++      K ES D++ D+  F   +  +W+RI + I+REC+RLED
Sbjct: 206  VREFKNGMHCVLKYLDDPQNVAKKESYDANVDVFRFEDCQRFDWSRIQAFIVRECKRLED 265

Query: 278  GLPMYSCRQEILRQIQCQQVMVLVGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISA 337
            GLP+Y  RQ+ILR+I  +Q++VL+GETG GKSTQLVQFLADSG++A +SIVCTQPRKI+A
Sbjct: 266  GLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAA 325

Query: 338  VSLAHRVREESRGCYDDDDYISCYPSFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSC 397
            +SLA RVREESRGCY+DD  I CYPSFSSAQ F SK+IYMTDHCLLQH+MND+ LS +SC
Sbjct: 326  ISLAQRVREESRGCYEDDSVI-CYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 385

Query: 398  IIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSKYFFGCGIFHVPGRN 457
            II+DEAHERSLNTDLLLAL+K LL  R DL L+IMSATA+A QLSKYF+ CGI HV GRN
Sbjct: 386  IIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 445

Query: 458  FPVDIKYVPSSDEGTSSSGIVASYVTDVVRMSSEIHWQEKGGTILAFLTSQMEVEWACEN 517
            FPVD++YVP +  GTS+   VASYV+DVVRM  E+H  EK GTILAFLTS+MEVEWACE 
Sbjct: 446  FPVDVRYVPCATAGTSA---VASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEK 505

Query: 518  FHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKD 577
            F AP  V L FHG+LSFDEQF VF+ +PG+RKVIFATN+AETSLTIPGVK+VID G VK+
Sbjct: 506  FDAPSAVALPFHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKE 565

Query: 578  SKFEPGSGMNILKVCRTSQSSANQRAGRAGRTEPGRCYRLYTESEFELMSPNHEPEIRKV 637
            S FEPG+GMN+L+VCR SQSSANQRAGRAGRTEPGRCYRLY++S+FE    N EPEI +V
Sbjct: 566  SYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRV 625

Query: 638  HLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLNNKVYELTNEGCNL 697
            HLG+A+LRILALG+++V  FDFVDAPSA+A++MAIRNLVQLGAI LNN V+ELT EG  L
Sbjct: 626  HLGIAVLRILALGIRDVQGFDFVDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFL 685

Query: 698  VKLGIEPRLGKLILSCFDCRVRREGVVLAVLMTNASSIFCRVGRVEDKLKSDCQKVQFCH 757
            VKLGIEPRLGKLILSCF  R+ REG+VLA +M NASSIFCRVG  ++K+K+DC KVQFCH
Sbjct: 686  VKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCH 745

Query: 758  ADGDLFTLLSVYKQYEALPKEKKNKWCWENSINAKTMRRCQDAILELERCLKQELHIIIP 817
             +GDLFTLLSVYK++++LP+E++NKWCWENS+NAK++RRCQD I ELE CL++EL IIIP
Sbjct: 746  RNGDLFTLLSVYKEWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLERELAIIIP 805

Query: 818  SYWLWSPLKPSDHDRNLKKCILASLAENVAMFTGYDRLGYEVALTGQHVQLHPSCSLLIF 877
            SYWLW+P K +++D+ LK+ IL +LAENVAMF+GYD+LGYEVA TGQHVQLHPSCSLLIF
Sbjct: 806  SYWLWNPHKYTEYDKWLKEIILCALAENVAMFSGYDQLGYEVATTGQHVQLHPSCSLLIF 865

Query: 878  SERPKWVVFGEILSITNEYLVCVTAFDVDALLTLSPPPLFDISNMEQHRLEGRVLSGFGK 937
             ++P WVVFGE+LS+ N+YLVCVTAFD D+L TL P PLFD+S ME+ +L  RV++GFG 
Sbjct: 866  GQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVSMMERQKLHVRVITGFGS 925

Query: 938  TLLKRVCGKSNSNLLSLTSHVQKVFSDNCIGIEVNINQNEILLFSRTENMDKVCHFVNDI 997
             LLK+ CGKSNSN+LSL S ++  F D  IGIEVN++QN+ILLF+ ++++++V   V+D+
Sbjct: 926  ILLKKFCGKSNSNVLSLVSRLRSTFMDERIGIEVNVDQNQILLFASSQDIEEVLGLVSDV 985

Query: 998  LEYERKYLLNECMEKCLYHGNGGSTPVALLGAGAKIRHLELEKRYLTVYAYRSNVDIIDD 1057
            LEYE+K+L NEC+EKCLY G G S  VAL GAGA+I+HLELE+R+LTV  Y SN +I+DD
Sbjct: 986  LEYEKKWLHNECIEKCLYQGAGVSPSVALFGAGAEIKHLELERRFLTVDVYHSNANILDD 1045

Query: 1058 KEFFMSLEKFVSGTVCAIQKVSCSGQDVDDKERGHRITFLTPDAAEKASKFDSDSFCGSL 1117
            KE  M LEK  SG++C+I K +  GQD D+K++  R+TFLTPD A KA++ +   + GSL
Sbjct: 1046 KELLMFLEKNASGSICSIHKFAV-GQDSDEKDKWGRVTFLTPDTAGKATELNGVEYNGSL 1105

Query: 1118 VKITPSQLTAGCDNKLFTFPPVKAKVFWPRRLSKGFAVVKCNIYDVGFILNDFSNLQIGD 1177
            +K+ PS+ T G DNK++TFP VKAKV+WPRRLSKGFAVVKC+  DV F++ DF +L IG 
Sbjct: 1106 LKVVPSRATLGGDNKMYTFPAVKAKVYWPRRLSKGFAVVKCDATDVEFLVKDFFDLAIGG 1165

Query: 1178 RFLRSEPSIKYSDCVTISGIDKELSEADILNVLRSVTDRKILDLFLVRENAVDNPPVHSC 1237
            R++R E   +  D V ISG+DKELSE +IL  LR VT R+I DLFLVR +AV+ P   + 
Sbjct: 1166 RYVRCEIGRRSMDAVVISGLDKELSEDEILGELRKVTTRRIRDLFLVRGDAVECPQFDAF 1225

Query: 1238 EEALLKEISPFMPKSNPHAKCCHVQVFPPQPKDFYMRAAINFDGRLHLEAAKALECLEGK 1297
            EEALL+EIS FMPK N HA CC VQVFPP+PKD +M+A I FDGRLHLEAAKALE LEGK
Sbjct: 1226 EEALLREISRFMPKRNSHANCCRVQVFPPEPKDAFMKAFITFDGRLHLEAAKALEQLEGK 1285

Query: 1298 AL----------------SVGELDEDYYSLVWSDSDDLESSCQ--PGVECTLSQNVNGSY 1357
             L                S        YS++  + + L ++     G EC + +N NGSY
Sbjct: 1286 VLPGCGPWQKMKCQQLFHSSLSCPASVYSVIKEELNSLLATLNRVNGAECVVERNYNGSY 1345

Query: 1358 RVKLSANATKTVAELRRPVEELLRGKIIDHASLTPTVLQHLTSRAGFDLINFLQRENGVY 1417
            RV++S+NATKTVA+LRRPVEEL+RG+ ++HASLTPT+LQHL +R G +L   LQ+E   +
Sbjct: 1346 RVRISSNATKTVADLRRPVEELMRGRTVNHASLTPTILQHLFTRDGINLRKSLQQETRTF 1405

Query: 1418 ILFDRQRLSLRIFGASEKIAEAEQKLIQSLQTIHESKQLEIHLRGKSLPPNLLKAVVEKF 1477
            ILFDR  LS++IFGA + IAEA+QKLIQSL T HESKQLEIHLRG  LPP+L+K VV +F
Sbjct: 1406 ILFDRHTLSVKIFGALDNIAEAQQKLIQSLLTYHESKQLEIHLRGGVLPPDLMKEVVRRF 1465

Query: 1478 GPDLNGLKQKFPGAGFTLNTRRHILYVQGSKDLKQEVETIIFELAKMSGGSAERPDDADA 1537
            GPDL GLK+K PGA F+LNTRRH++ V G ++LKQ+VE II E+A+ S GSAER     +
Sbjct: 1466 GPDLQGLKEKVPGAEFSLNTRRHVISVHGDRELKQKVEEIINEIAQTSDGSAERLHSEAS 1525

Query: 1538 CPICLCDIEDDRFELEACGHHFCRQCLVEQFESAIKNQGRFPVCCAKQKCESPILLADMR 1597
            CPICLC++E+  + LE C H FCR CLVEQ ESAIKN   FP+ CA   C++ ILL D+R
Sbjct: 1526 CPICLCELEES-YTLEGCTHLFCRSCLVEQCESAIKNMDSFPIRCAHSGCKALILLTDLR 1585

Query: 1598 TLLSSEKLEELFRASLGAFVASSDGAYRFCPSPDCPSVYRVASPDMSGEPFMCGACYSET 1657
            +LLS+EK EELFRASLGA+VASS G YRFCPSPDCPSVYRVA P  +GEPF CGACY+ET
Sbjct: 1586 SLLSNEKFEELFRASLGAYVASSGGTYRFCPSPDCPSVYRVAEPGTAGEPFFCGACYAET 1645

Query: 1658 CNRCHLEYHPFLSCEQYRVFKEDPDSSLSEWRKDKENVKNCPVCGYTIEKMDGCNHVECR 1717
            C  CHLE+HP+LSCE+YR FKEDPDSSL EW K KE+VK CP+CGYTIEK++GCNH+ECR
Sbjct: 1646 CTMCHLEHHPYLSCEKYREFKEDPDSSLKEWCKGKEHVKTCPICGYTIEKIEGCNHIECR 1705

Query: 1718 CGRHICWVCLEYFGSSDECYIHLRSIHMTIV 1724
            CGRHICWVCL+ F S+++CY HLRS HM+ +
Sbjct: 1706 CGRHICWVCLDIFNSANDCYGHLRSKHMSFI 1730

[Close]

BLAST of Lsi05G008150 vs. TrEMBL
Match: A0A0D2T6A7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G111000 PE=4 SV=1)

HSP 1 Score: 2114.3 bits (5477), Expect = 0.0e+00
Identity = 1039/1706 (60.90%), Postives = 1302/1706 (76.32%), Query Frame = 1


Query: 41   PAQFRKFSGQQTSPNRANFVIDLVLEHRGVLK--SSVEDLIAKCNSKPDNFIVPHVGSVS 100
            PA   + S    + +R NF+I L+ +        ++++ LI++ +  P N  +   G ++
Sbjct: 57   PASTTEGSVNSNALHRPNFIIQLLHDFSSSPSKPNNLQTLISQLDPSPQNSHIYTTGKIA 116

Query: 101  AFMYFKQWVSALEAMVELWELRLDGLHGFTPILKPRINLPSDFDELHDRLRNLFAERIKR 160
            A + F++W   L +++ LW  RLDG   +TP L   + +PSD  EL+  L+ LF+  I  
Sbjct: 117  ASLIFQEWSKTLSSVLHLWRSRLDGSIHYTPKLISNVIVPSDLVELNQNLKTLFSSHITG 176

Query: 161  LMDGEKVRHWQNKCDLVMDEI-DRILDMLRRPLRIATVFELKEKKKGLLIEKKSIMRKVE 220
            LM+GE VR WQ K +   DEI D    M +R   +   +EL +KKK L  E+ +I ++++
Sbjct: 177  LMEGELVRKWQKKINEKSDEIADLSGQMGKRKYSLGRFYELDDKKKALKAERSTISKRLK 236

Query: 221  EFNSAMRYILDYVEGKKLESSDSHD-LGFFTFDETINWNRIHSLILRECRRLEDGLPMYS 280
            EF   MR +L  +E  ++ + +  + +  +  +  ++W  IH LILRECRRLEDGLP+Y+
Sbjct: 237  EFKGGMRSLLRCLETGEIGNEEGDEGVEVYRVEGELDWKLIHQLILRECRRLEDGLPIYA 296

Query: 281  CRQEILRQIQCQQVMVLVGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISAVSLAHR 340
             RQEIL +I  QQV VL+GETGSGKSTQLVQFL+DSG++A++SIVCTQPRKI+A+SLA R
Sbjct: 297  HRQEILTRIHGQQVTVLIGETGSGKSTQLVQFLSDSGIAANESIVCTQPRKIAAISLAKR 356

Query: 341  VREESRGCYDDDDYISCYPSFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEA 400
            VREES GCY D+  I CY +FSS+QQF SK+IYMTDHCLLQHYM DK LS +SCII+DEA
Sbjct: 357  VREESIGCYSDNSVI-CYSTFSSSQQFHSKVIYMTDHCLLQHYMKDKNLSGISCIIVDEA 416

Query: 401  HERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIK 460
            HERSLNTDLLLAL+K LL  R DL L+IMSATANA+QLS YFFGCGIFH+ GRNFPVDIK
Sbjct: 417  HERSLNTDLLLALVKDLLGRRFDLRLVIMSATANANQLSDYFFGCGIFHLEGRNFPVDIK 476

Query: 461  YVPSSDEGTSSSGIVASYVTDVVRMSSEIHWQEKGGTILAFLTSQMEVEWACENFHAPGT 520
            YVP + EGTS SG+VA+YV+ V+RM++E+H  EK G ILAFLTSQMEVEWAC++F AP  
Sbjct: 477  YVPCATEGTSGSGMVATYVSYVLRMAAEVHKTEKEGNILAFLTSQMEVEWACDHFEAPNA 536

Query: 521  VPLAFHGKLSFDEQFRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPG 580
            + L  HGKLSF+EQ  VFQ++PGKRK+IFATN+AETSLTIPGVKYVID G VK+SKFEPG
Sbjct: 537  IVLPLHGKLSFEEQCHVFQNYPGKRKIIFATNIAETSLTIPGVKYVIDSGMVKESKFEPG 596

Query: 581  SGMNILKVCRTSQSSANQRAGRAGRTEPGRCYRLYTESEFELMSPNHEPEIRKVHLGVAI 640
            +GMN+LKVC  SQSSANQRAGRAGRTEPGRCYRLYTES+FELM+ N EPEI +VHLG+A+
Sbjct: 597  TGMNVLKVCWISQSSANQRAGRAGRTEPGRCYRLYTESDFELMTSNQEPEICRVHLGIAV 656

Query: 641  LRILALGVKNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLNNKVYELTNEGCNLVKLGIE 700
            LRILALG+KN+  FDFVDAPS +A+D A RNL+QLGAI   N V+ELT+EG  LVKLGIE
Sbjct: 657  LRILALGIKNIQTFDFVDAPSPKAIDSATRNLIQLGAIVEKNGVFELTDEGRYLVKLGIE 716

Query: 701  PRLGKLILSCFDCRVRREGVVLAVLMTNASSIFCRVGRVEDKLKSDCQKVQFCHADGDLF 760
            PRLGKLI+SCF C + REG+VLA +M NASSIFCRVG  +DK+K+DC KVQFCH +GDLF
Sbjct: 717  PRLGKLIISCFHCGLCREGLVLAAVMANASSIFCRVGNDDDKVKADCLKVQFCHQNGDLF 776

Query: 761  TLLSVYKQYEALPKEKKNKWCWENSINAKTMRRCQDAILELERCLKQELHIIIPSYWLWS 820
            TLLSVYK++EALP ++KNKWCWENSINAK+MRRCQD + ELE CLK+EL +IIPSY +W 
Sbjct: 777  TLLSVYKEWEALPSDRKNKWCWENSINAKSMRRCQDTVTELEICLKKELAVIIPSYLIWD 836

Query: 821  PLKPSDHDRNLKKCILASLAENVAMFTGYDRLGYEVALTGQHVQLHPSCSLLIFSERPKW 880
            P K ++ D+ LK  IL+SLAENVAM++G+D+LGYEVALT Q+VQLHPSCSLLIF ++P W
Sbjct: 837  PHKSTERDKTLKAIILSSLAENVAMYSGHDQLGYEVALTRQYVQLHPSCSLLIFGQKPSW 896

Query: 881  VVFGEILSITNEYLVCVTAFDVDALLTLSPPPLFDISNMEQHRLEGRVLSGFGKTLLKRV 940
            VVFGE+LSIT +YLVCVTAFD ++L TL PPPLFD S ME  RL+ + L+GFG TLLK+ 
Sbjct: 897  VVFGELLSITKQYLVCVTAFDYESLATLDPPPLFDASQMESRRLQVKALTGFGSTLLKKF 956

Query: 941  CGKSNSNLLSLTSHVQKVFSDNCIGIEVNINQNEILLFSRTENMDKVCHFVNDILEYERK 1000
            CGKSN NL SL+S ++ V  D  IG+EVN++QNEILLF+ + +M KV  FV D+LE E+K
Sbjct: 957  CGKSNHNLRSLSSRIKTVCKDERIGVEVNVDQNEILLFASSVDMQKVLDFVTDVLECEKK 1016

Query: 1001 YLLNECMEKCLYHGNGGSTPVALLGAGAKIRHLELEKRYLTVYAYRSNVDIIDDKEFFMS 1060
            +L NECMEK L+HG   S  +AL GAGA+I+HLE++KRYL V  + SN++ IDDKE  M 
Sbjct: 1017 WLHNECMEKPLFHGRSASPCMALFGAGAEIKHLEVDKRYLAVDVFHSNLNAIDDKELLMF 1076

Query: 1061 LEKFVSGTVCAIQKVSCSGQDVDDKERGHRITFLTPDAAEKASKFDSDSFCGSLVKITPS 1120
             EK  +G +C++ K   +GQ++DDKE+  +I FLTPDAA KA++ D   F GS +K+ PS
Sbjct: 1077 FEKHSNGGICSVHKSQANGQEIDDKEKWGKIMFLTPDAARKAAELDGVEFSGSALKVLPS 1136

Query: 1121 QLTAGCDNKLFTFPPVKAKVFWPRRLSKGFAVVKCNIYDVGFILNDFSN-LQIGDRFLRS 1180
            Q + G D+K+F+FPPVKAK+ WPRRLSKG  +V+C+  DV  IL DFS+ L I  +++  
Sbjct: 1137 QTSFGGDHKMFSFPPVKAKLSWPRRLSKGIGIVRCDRLDVPDILYDFSSRLVIAGKYVNC 1196

Query: 1181 EPSIKYSDCVTISGIDKELSEADILNVLRSVTDRKILDLFLVRENAVDNPPVHSCEEALL 1240
              S K  D V I GIDKELSEA+I + L S T+R+I D F+VR +AV NP   +CEEAL 
Sbjct: 1197 GVSRKCDDSVVIYGIDKELSEAEIWDTLHSATEREIHDFFIVRGDAVKNPTCGACEEALW 1256

Query: 1241 KEISPFMPKSNPHAKCCHVQVFPPQPKDFYMRAAINFDGRLHLEAAKALECLEGKAL--- 1300
            +EISPFMPK NP+  CC VQVF P+PK+ +M+A I FDGRLHLEAAKALE LEGK L   
Sbjct: 1257 REISPFMPKGNPYTNCCWVQVFEPEPKETFMKALITFDGRLHLEAAKALEQLEGKVLPGC 1316

Query: 1301 -------------SVGELDEDYYSLVWSDSDDLESSCQ--PGVECTLSQNVNGSYRVKLS 1360
                         S        Y+++    D L +S +   G +C L  N NGS RV++S
Sbjct: 1317 LSWQKIRCQQLFHSSISCSSSVYAVIKKQLDSLLASFRHVKGADCFLETNENGSCRVRIS 1376

Query: 1361 ANATKTVAELRRPVEELLRGKIIDHASLTPTVLQHLTSRAGFDLINFLQRENGVYILFDR 1420
            ANATKTVAELRRPVEEL+ G+ + HASLTP++LQHL SR G +L+  LQRE   YILFDR
Sbjct: 1377 ANATKTVAELRRPVEELMNGRTVKHASLTPSILQHLFSRDGINLMRSLQRETRTYILFDR 1436

Query: 1421 QRLSLRIFGASEKIAEAEQKLIQSLQTIHESKQLEIHLRGKSLPPNLLKAVVEKFGPDLN 1480
              L++RIFG  +  A A+QKL+QSL + HESKQLE+ LRG+ LPP+++K VV+KFGPDL+
Sbjct: 1437 HSLNIRIFGLPDDAAVAQQKLMQSLLSYHESKQLEVRLRGRGLPPDMMKEVVKKFGPDLH 1496

Query: 1481 GLKQKFPGAGFTLNTRRHILYVQGSKDLKQEVETIIFELAKMSGGSAERPDDADACPICL 1540
            GLK+K PGA FTLNTR HI+ + G+K++KQ+VE I+ ++A+     A R D   +CPICL
Sbjct: 1497 GLKEKIPGAEFTLNTRHHIISICGNKEMKQKVEEIVLQIAEAGRDLAVRSDSEVSCPICL 1556

Query: 1541 CDIEDDRFELEACGHHFCRQCLVEQFESAIKNQGRFPVCCAKQKCESPILLADMRTLLSS 1600
            C++ED  + LE C H FCR CLVEQ ESAIKN   FP+CCA+Q C++PILL D+++LLS+
Sbjct: 1557 CEVEDG-YRLEGCSHFFCRSCLVEQCESAIKNLDSFPLCCAQQGCKAPILLTDLKSLLST 1616

Query: 1601 EKLEELFRASLGAFVASSDGAYRFCPSPDCPSVYRVASPDMSGEPFMCGACYSETCNRCH 1660
            EKLEELFRASLGAFV SS GAYRFCPSPDCPSVYRVA P+  GEPF+CGACY+ETC RCH
Sbjct: 1617 EKLEELFRASLGAFVVSSGGAYRFCPSPDCPSVYRVAGPETVGEPFVCGACYAETCTRCH 1676

Query: 1661 LEYHPFLSCEQYRVFKEDPDSSLSEWRKDKENVKNCPVCGYTIEKMDGCNHVECRCGRHI 1720
            LEYHP+LSCE+YR FKEDPD SL EW K KE VK CPVCGYTIEK+DGCNHVEC+CGRH+
Sbjct: 1677 LEYHPYLSCEKYREFKEDPDMSLKEWCKGKEQVKTCPVCGYTIEKIDGCNHVECKCGRHV 1736

Query: 1721 CWVCLEYFGSSDECYIHLRSIHMTIV 1724
            CWVCLE+F SSD+CY HLR++HM I+
Sbjct: 1737 CWVCLEFFSSSDDCYGHLRAVHMAII 1760

[Close]

BLAST of Lsi05G008150 vs. TrEMBL
Match: A0A0B0NMS9_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_07330 PE=4 SV=1)

HSP 1 Score: 2114.0 bits (5476), Expect = 0.0e+00
Identity = 1043/1758 (59.33%), Postives = 1318/1758 (74.97%), Query Frame = 1


Query: 3    SSSSTAFRPPDSSFRCTRASNLHYLPRSPNTGPSTPDYPAQFRKFSGQQTSPNRA----- 62
            SSSS    PP            H      N     P++ A  +K+  ++  P  +     
Sbjct: 5    SSSSNHRHPPPPGGHKPYPHRQHQQSSYQNNFRCVPNFQAVNKKYYRRRFPPPASTTDGS 64

Query: 63   ---------NFVIDLVLEHRGVLKS--SVEDLIAKCNSKPDNFIVPHVGSVSAFMYFKQW 122
                     NF+I LV +          ++ LI++ +  P N  +   G ++A + F++W
Sbjct: 65   VNSNALHCPNFIIQLVHDFSSSPSKPDDLQTLISQLDPSPQNSHIYTTGKIAASLIFQEW 124

Query: 123  VSALEAMVELWELRLDGLHGFTPILKPRINLPSDFDELHDRLRNLFAERIKRLMDGEKVR 182
               L +++ LW  RLDG   +TP L   + +PSD  EL+  L+ LF+  I  LM+G  VR
Sbjct: 125  SKTLSSIIHLWRSRLDGSIHYTPKLISNVIVPSDTVELNQNLKTLFSSHITGLMEGALVR 184

Query: 183  HWQNKCDLVMDEI-DRILDMLRRPLRIATVFELKEKKKGLLIEKKSIMRKVEEFNSAMRY 242
             WQ K +   DEI D +  M +R   +   +EL +KKK L  E+ +I ++++EF   M  
Sbjct: 185  KWQEKINEKSDEIADLVGQMGKRKYSLGMFYELDDKKKALKAERSTISKRLKEFKGGMSS 244

Query: 243  ILDYVEGKKLESSDSHD-LGFFTFDETINWNRIHSLILRECRRLEDGLPMYSCRQEILRQ 302
            +L  +E  ++ + +  + +  +  +  ++W  IH LILRECRRLEDGLP+Y+ RQEIL +
Sbjct: 245  LLRCLETWEIGNEEGDEGVKVYRVEGELDWKLIHQLILRECRRLEDGLPIYAYRQEILTR 304

Query: 303  IQCQQVMVLVGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISAVSLAHRVREESRGC 362
            I  QQVMVL+GETGSGKSTQLVQFL+DSG++A++SIVCTQPRKI+A+SLA RVREES GC
Sbjct: 305  IHGQQVMVLIGETGSGKSTQLVQFLSDSGIAANESIVCTQPRKIAAISLAKRVREESIGC 364

Query: 363  YDDDDYISCYPSFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTD 422
            Y D+  I CYP+FSS+QQF SK+IYMTDHCLLQHYM DK LS +SCII+DEAHERSLNTD
Sbjct: 365  YSDNSVI-CYPTFSSSQQFDSKVIYMTDHCLLQHYMKDKNLSGISCIIVDEAHERSLNTD 424

Query: 423  LLLALLKSLLMVRIDLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIKYVPSSDEG 482
            LLLAL+K LL  R DL L+IMSATANA+QLS YFFGCGIFH+ GRNFPVDIKYVP + EG
Sbjct: 425  LLLALVKDLLGRRFDLRLVIMSATANANQLSDYFFGCGIFHLEGRNFPVDIKYVPCATEG 484

Query: 483  TSSSGIVASYVTDVVRMSSEIHWQEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGK 542
            TS SG+VA+YV+DV+RM++EIH  EK G ILAFLTSQMEVEWAC++F AP  + L  HGK
Sbjct: 485  TSGSGMVATYVSDVLRMAAEIHKTEKEGNILAFLTSQMEVEWACDHFEAPNAIVLPLHGK 544

Query: 543  LSFDEQFRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKV 602
            LSF+EQ  VFQ++PGKRK++FATN+AETSLTIPGVKYVID G VK+SKFEPG+GMN+L+V
Sbjct: 545  LSFEEQCHVFQNYPGKRKIVFATNIAETSLTIPGVKYVIDSGMVKESKFEPGTGMNVLEV 604

Query: 603  CRTSQSSANQRAGRAGRTEPGRCYRLYTESEFELMSPNHEPEIRKVHLGVAILRILALGV 662
            C  SQSSANQRAGRAGRTEPGRCYRLYTE++FELM+ N EPEIR+VHLG+A+LRILALG+
Sbjct: 605  CWISQSSANQRAGRAGRTEPGRCYRLYTENDFELMTSNQEPEIRRVHLGIAVLRILALGI 664

Query: 663  KNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLNNKVYELTNEGCNLVKLGIEPRLGKLIL 722
            KN+  FDFVDAPS++A+D A RNL+QLGAI   N V+ELT+EG  LVKLGIEPRLGKLI+
Sbjct: 665  KNIQTFDFVDAPSSKAIDSATRNLIQLGAIVEKNGVFELTDEGQYLVKLGIEPRLGKLII 724

Query: 723  SCFDCRVRREGVVLAVLMTNASSIFCRVGRVEDKLKSDCQKVQFCHADGDLFTLLSVYKQ 782
            SCF C +RREG+VLA +M NASSIFCRVG  +DK+K+DC KVQFCH +GDLFTLLSVYK+
Sbjct: 725  SCFHCGLRREGLVLAAVMANASSIFCRVGNDDDKVKADCLKVQFCHQNGDLFTLLSVYKE 784

Query: 783  YEALPKEKKNKWCWENSINAKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHD 842
            +EALP ++KNKWCWENSINAK+MRRCQD + ELE CLK+EL +IIPSY +W P K ++ D
Sbjct: 785  WEALPFDRKNKWCWENSINAKSMRRCQDTVTELEICLKKELAVIIPSYLIWDPHKSTERD 844

Query: 843  RNLKKCILASLAENVAMFTGYDRLGYEVALTGQHVQLHPSCSLLIFSERPKWVVFGEILS 902
            + LK  IL+SLAENVAM+ G+D+LGYEVALTGQ+VQLHPSCSLLIF ++P WVVF E+LS
Sbjct: 845  KTLKAIILSSLAENVAMYCGHDQLGYEVALTGQYVQLHPSCSLLIFGQKPSWVVFSELLS 904

Query: 903  ITNEYLVCVTAFDVDALLTLSPPPLFDISNMEQHRLEGRVLSGFGKTLLKRVCGKSNSNL 962
            +T +YLVCVT FD ++L TL PPPLFD S ME  +L+ + L+GFG TLLK+ CGKSN N+
Sbjct: 905  VTKQYLVCVTTFDYESLATLDPPPLFDASQMESRKLQVKALTGFGSTLLKKFCGKSNHNI 964

Query: 963  LSLTSHVQKVFSDNCIGIEVNINQNEILLFSRTENMDKVCHFVNDILEYERKYLLNECME 1022
             SL+S ++ +  D  IG+EVN++QNEILLF+ + +M KV  FV D+LE E+K+L NECME
Sbjct: 965  RSLSSRIKTICKDERIGVEVNVDQNEILLFASSVDMQKVLDFVTDVLECEKKWLHNECME 1024

Query: 1023 KCLYHGNGGSTPVALLGAGAKIRHLELEKRYLTVYAYRSNVDIIDDKEFFMSLEKFVSGT 1082
            K L+HG   S  +AL GAGA+I+HLE++KRYL V  + SN++ IDDKE  M  EK  +G 
Sbjct: 1025 KPLFHGRSASPSMALFGAGAEIKHLEVDKRYLAVDVFHSNLNAIDDKELLMFFEKHSNGG 1084

Query: 1083 VCAIQKVSCSGQDVDDKERGHRITFLTPDAAEKASKFDSDSFCGSLVKITPSQLTAGCDN 1142
            +C+  K   +GQ++DDKE+  +I FLTPDAA KAS+ D   F GS +K+ PSQ + G D+
Sbjct: 1085 ICSAHKSQANGQEIDDKEKWGKIIFLTPDAARKASELDGVDFSGSALKVLPSQTSFGGDH 1144

Query: 1143 KLFTFPPVKAKVFWPRRLSKGFAVVKCNIYDVGFILNDFSN-LQIGDRFLRSEPSIKYSD 1202
            K+F+FPPVKAK+ WPRRLSKG  +VKC+  DV  IL DFS+ L I  +++  E S K  D
Sbjct: 1145 KMFSFPPVKAKLSWPRRLSKGIGIVKCDRLDVQNILYDFSSRLVIAGKYVNCEVSRKCDD 1204

Query: 1203 CVTISGIDKELSEADILNVLRSVTDRKILDLFLVRENAVDNPPVHSCEEALLKEISPFMP 1262
             V I GIDKELSEA++ ++L S T+R+I D FLVR +AV+NP   +CEEAL +EISPFMP
Sbjct: 1205 SVLIYGIDKELSEAEVRDILHSATEREIHDFFLVRGDAVENPTCGACEEALWREISPFMP 1264

Query: 1263 KSNPHAKCCHVQVFPPQPKDFYMRAAINFDGRLHLEAAKALECLEGKAL----------- 1322
            K NP+  CC VQVF P+PK+ +M+A I FDGRLHLEAAKALE LEGK L           
Sbjct: 1265 KGNPYTNCCWVQVFEPEPKETFMKALITFDGRLHLEAAKALEQLEGKVLPGCLSWQKIRC 1324

Query: 1323 -----SVGELDEDYYSLVWSDSDDLESSCQ--PGVECTLSQNVNGSYRVKLSANATKTVA 1382
                 S        Y+++    D L +S +   G +C L  N NGS RV++SANATKTVA
Sbjct: 1325 QQLFHSSISCSSFVYAVIKKQLDSLLASFRHVKGADCFLETNENGSCRVRISANATKTVA 1384

Query: 1383 ELRRPVEELLRGKIIDHASLTPTVLQHLTSRAGFDLINFLQRENGVYILFDRQRLSLRIF 1442
            ELRRP+EEL+ G+ + HASLTP++LQHL SR G +L+  LQRE   YILF+R  L++RIF
Sbjct: 1385 ELRRPLEELMNGRTVKHASLTPSILQHLISRDGINLMRSLQRETRTYILFNRHSLNIRIF 1444

Query: 1443 GASEKIAEAEQKLIQSLQTIHESKQLEIHLRGKSLPPNLLKAVVEKFGPDLNGLKQKFPG 1502
            G+ +  A A+QKL+QSL + HESKQLE+ LRG+ LPP+++K VV+KFGPDL+GLK+K PG
Sbjct: 1445 GSRDDAAVAQQKLMQSLLSYHESKQLEVRLRGRGLPPDMMKEVVKKFGPDLHGLKEKIPG 1504

Query: 1503 AGFTLNTRRHILYVQGSKDLKQEVETIIFELAKMSGGSAERPDDADACPICLCDIEDDRF 1562
            A FTLNTR HI+ + G+K++KQ+VE I+ ++A+     A R D   +CPICLC++ED  +
Sbjct: 1505 AEFTLNTRHHIISICGNKEMKQKVEEIVLQIAEAGRDLAVRSDSEVSCPICLCEVEDG-Y 1564

Query: 1563 ELEACGHHFCRQCLVEQFESAIKNQGRFPVCCAKQKCESPILLADMRTLLSSEKLEELFR 1622
             LE C H FCR CL++Q ESAIKN   FP+CCA+Q C++PILL D+++LLS+EKLEELFR
Sbjct: 1565 RLEGCSHFFCRSCLLKQCESAIKNLDSFPLCCAQQGCKAPILLTDLKSLLSTEKLEELFR 1624

Query: 1623 ASLGAFVASSDGAYRFCPSPDCPSVYRVASPDMSGEPFMCGACYSETCNRCHLEYHPFLS 1682
            ASLGAFV SS GAYRFCPSPDCPSVYRVA P+  GEPF+CGACY+ETC RCHLEYHP+LS
Sbjct: 1625 ASLGAFVVSSGGAYRFCPSPDCPSVYRVAGPETFGEPFVCGACYAETCTRCHLEYHPYLS 1684

Query: 1683 CEQYRVFKEDPDSSLSEWRKDKENVKNCPVCGYTIEKMDGCNHVECRCGRHICWVCLEYF 1724
            CE+YR FKEDPD SL EW K KE VK CPVCGYTIEK+DGCNHVEC+CGRH+CWVCLE+F
Sbjct: 1685 CEKYREFKEDPDLSLKEWCKGKEQVKTCPVCGYTIEKIDGCNHVECKCGRHVCWVCLEFF 1744

[Close]

BLAST of Lsi05G008150 vs. TAIR10
Match: AT5G10370.1 (AT5G10370.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related)

HSP 1 Score: 1845.5 bits (4779), Expect = 0.0e+00
Identity = 939/1719 (54.62%), Postives = 1230/1719 (71.55%), Query Frame = 1


Query: 29   RSPNTGPSTPDYPAQFRKFSGQQTSPNRANFVIDLVLEHRGVLKSSVEDLIAKCNSKPDN 88
            R+P++G S P   A+   F  Q   P  AN    L    +   K  +E L   C    ++
Sbjct: 67   RNPSSGYSPPVTRAR-PNFIVQLLHPAAANSDTKLCFSTK---KQEIESLALLCEIPEES 126

Query: 89   FIVPHVGSVSAFMYFKQWVSALEAMVELWELRLDGLHGFTPILKPRINLPSDFDELHDRL 148
              VP  G ++    F+QWV A  A+V LW+ RL G H F P L P + +PSD +EL DRL
Sbjct: 127  IHVPQFGCIAGSFSFRQWVDARSAVVALWDYRLQGKHEFVPELIPNVIVPSDMNELKDRL 186

Query: 149  RNLFAERIKRLMD-GEKVRHWQNKCDLVMDEIDR--ILDMLRRPLRIATVFELKEKKKGL 208
            R+LF+  I  LM+ GE V+    K  L ++E  R  +    +R L+    FE+ EKKK +
Sbjct: 187  RDLFSSHILSLMENGEGVK----KVRLEIEEKSRQVVSFSSKRGLK----FEVFEKKKAI 246

Query: 209  LIEKKSIMRKVEEFNSAMRYILDYVEGKK-----LESSDSHDLGFFTFDETINWNRIHSL 268
              E+  ++ ++EEFN+AM+ IL Y+ G+      L+  +  D+  F  +   +W RIH L
Sbjct: 247  EAERDLVVNRLEEFNNAMKSILRYLIGQDGYEFDLDDEEEGDVAVFCLEGAYDWRRIHCL 306

Query: 269  ILRECRRLEDGLPMYSCRQEILRQIQCQQVMVLVGETGSGKSTQLVQFLADSGLSASKSI 328
            I RECRRLEDGLP+Y+ R++IL++I  +Q+MVL+GETGSGKSTQLVQFLADSG++AS+SI
Sbjct: 307  IRRECRRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESI 366

Query: 329  VCTQPRKISAVSLAHRVREESRGCYDDDDYISCYPSFSSAQQFKSKIIYMTDHCLLQHYM 388
            VCTQPRKI+A++LA RVREES GCY+++  +SC P+FSS ++  SK++YMTD+CLLQHYM
Sbjct: 367  VCTQPRKIAAMTLADRVREESSGCYEENT-VSCTPTFSSTEEISSKVVYMTDNCLLQHYM 426

Query: 389  NDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSKYFFG 448
             D+ LS +SC+IIDEAHERSLNTDLLLALLK LL  RIDL L+IMSATA+A QLS+YFF 
Sbjct: 427  KDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFS 486

Query: 449  CGIFHVPGRNFPVDIKYVPSSDEGTSSSGIVASYVTDVVRMSSEIHWQEKGGTILAFLTS 508
            CGI  V GRNFPV+I Y PS  E  S  G +ASYV DVV+M+ EIH  EK GTILAFLTS
Sbjct: 487  CGILLVNGRNFPVEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTS 546

Query: 509  QMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRKVIFATNLAETSLTIPGVK 568
            Q EVEWACE F  P  + L  HGKLSF+EQFRVFQ+HPG+RKVIFATN+AETSLTIPGVK
Sbjct: 547  QAEVEWACERFITPSAIALPLHGKLSFEEQFRVFQNHPGRRKVIFATNIAETSLTIPGVK 606

Query: 569  YVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRTEPGRCYRLYTESEFELMS 628
            YVID G VK+SK+EP +GM+ILKVCR SQSSA QRAGRAGRTEPGRCYRLY++++F+ M+
Sbjct: 607  YVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDSMN 666

Query: 629  PNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLNNKV 688
             N EPEIR+VHLGVA+LR+LALGV N+ +F+FVDAP  EA+ MA++NLVQLGA+   N V
Sbjct: 667  LNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGV 726

Query: 689  YELTNEGCNLVKLGIEPRLGKLILSCFDCRVRREGVVLAVLMTNASSIFCRVGRVEDKLK 748
            +ELT EG  LVKLG+EP+LGKLIL CF  R+ +EG+VLA +M NASSIFCRVG  +DK+K
Sbjct: 727  HELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMK 786

Query: 749  SDCQKVQFCHADGDLFTLLSVYKQYEALPKEKKNKWCWENSINAKTMRRCQDAILELERC 808
            +D  KVQFC+ +GDLFTLLSVYK++ +LP+E++NKWCWENS+NAK+MRRC+D + ELE C
Sbjct: 787  ADRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEIC 846

Query: 809  LKQELHIIIPSYWLWSPLKPSDHDRNLKKCILASLAENVAMFTGYDRLGYEVALTGQHVQ 868
            +++EL ++ PSYW+W+P + + HD++LK  ILASLAENVAM+TGY++LGYEVALTGQ VQ
Sbjct: 847  IERELTLVSPSYWVWNPNEGTKHDKHLKMVILASLAENVAMYTGYNQLGYEVALTGQQVQ 906

Query: 869  LHPSCSLLIFSERPKWVVFGEILSITNEYLVCVTAFDVDALLTLSPPPLFDISNMEQHRL 928
            LHPSCSLL F ++P WVVFGE+LSI ++YLVCVTA D +AL  L PPP FD+S M++ RL
Sbjct: 907  LHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTACDFEALYMLDPPPPFDVSQMDERRL 966

Query: 929  EGRVLSGFGKTLLKRVCGKSNSNLLSLTSHVQKVFSDNCIGIEVNINQNEILLFSRTENM 988
              + + G   T+LKR CGKSN +LLS+ S  + + SD  IGI+V+++QNEI L++   +M
Sbjct: 967  RIKKVVGCSSTVLKRFCGKSNRSLLSIVSRARSLCSDERIGIQVDVDQNEIRLYAPPLDM 1026

Query: 989  DKVCHFVNDILEYERKYLLNECMEKCLYHGNGGSTPVALLGAGAKIRHLELEKRYLTVYA 1048
            +KV   VND LE E+K++ NEC+EK LYHG  G  P+AL G+GA+I+HLE+++R+LTV  
Sbjct: 1027 EKVSALVNDALECEKKWMHNECLEKYLYHGR-GQVPIALFGSGAQIKHLEVDQRFLTVDV 1086

Query: 1049 YRSNVDIIDDKEFFMSLEKFVSGTVCAIQKVSCSGQDVDDKERGHRITFLTPDAAEKASK 1108
                 D++DD+E    LEK + G++C+I K + + QD D+KE+  RITFLTP++A KA++
Sbjct: 1087 LYYGDDVVDDRELLTFLEKKIDGSICSIYKFAANKQDCDEKEKWGRITFLTPESAMKATE 1146

Query: 1109 FDSDSFCGSLVKITPSQLTAGCDNKLFTFPPVKAKVFWPRRLSKGFAVVKCNIYDVGFIL 1168
                 F GS++K+ PS  T G   K+  F  V AK+ WPRR S G   +KC   D+  IL
Sbjct: 1147 IQKFYFKGSVLKLFPSLSTGGGIFKMPYFSSVTAKIRWPRRESSGRGCLKCPSGDIHRIL 1206

Query: 1169 NDFSNLQIGDRFLRSEPSIKYSDCVTISGIDKELSEADILNVLRSVTDRKILDLFLVREN 1228
             D S+L+IG  ++  +   + +D + ISG+  +LSEA++L+VL   T R+ L+ F+ R+ 
Sbjct: 1207 GDISSLEIGTNYVHIQRDQQSNDSILISGLG-DLSEAEVLDVLEFRTQRRDLNFFIFRKK 1266

Query: 1229 -AVDNPPVHSCEEALLKEISPFMPKSNPHAKCCHVQVFPPQPKDFYMRAAINFDGRLHLE 1288
             +V  P   +CEE L K I   M   NP   C  VQVF P+  +++MRA I FDGRLH E
Sbjct: 1267 YSVQCPSPTACEEELHKRIFARMSAKNPEPNCVQVQVFEPKEDNYFMRALIKFDGRLHFE 1326

Query: 1289 AAKALECLEGKAL----------------SVGELDEDYYSLVWSDSDDL--ESSCQPGVE 1348
            AAKAL+ L G+ L                S        Y+ V    + L      Q G E
Sbjct: 1327 AAKALQELNGEVLPGCLPWQKIKCEQLFQSSIICSASIYNTVKRQLNVLLARFERQKGGE 1386

Query: 1349 CTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIIDHASLTPTVLQHLTSRAGFDL 1408
            C L    NG+YRVK++A AT+ VAE+RR +EELLRG+ I+H   T  VLQHL SR G +L
Sbjct: 1387 CCLEPTHNGAYRVKITAYATRPVAEMRRELEELLRGRPINHPGFTRRVLQHLMSRDGINL 1446

Query: 1409 INFLQRENGVYILFDRQRLSLRIFGASEKIAEAEQKLIQSLQTIHESKQLEIHLRGKSLP 1468
            +  +Q+E   YIL DR  L++RI G SEKIA+AEQ+LIQ+L   HESKQLEIHLRG  + 
Sbjct: 1447 MRKIQQETETYILLDRHNLTVRICGTSEKIAKAEQELIQALMDYHESKQLEIHLRGPEIR 1506

Query: 1469 PNLLKAVVEKFGPDLNGLKQKFPGAGFTLNTRRHILYVQGSKDLKQEVETIIFELAKMSG 1528
            P+L+K VV++FGP+L G+K+K  G    LNTR H++ V GSK+++QEV+ ++ ELA+   
Sbjct: 1507 PDLMKEVVKRFGPELQGIKEKVHGVDLKLNTRYHVIQVHGSKEMRQEVQKMVNELAREKS 1566

Query: 1529 GSAERPDDADA-CPICLCDIEDDRFELEACGHHFCRQCLVEQFESAIKNQGRFPVCCAKQ 1588
               E+PD+ +  CPICL ++ DD + LE C H FC+ CL+EQFE++++N   FP+ C+  
Sbjct: 1567 ALGEKPDEIEVECPICLSEV-DDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHI 1626

Query: 1589 KCESPILLADMRTLLSSEKLEELFRASLGAFVASSDGAYRFCPSPDCPSVYRVASPDMSG 1648
             C +PI+LADMR LLS EKL+ELF ASL +FV SSDG +RFC +PDCPSVYRVA P  SG
Sbjct: 1627 DCGAPIVLADMRALLSQEKLDELFSASLSSFVTSSDGKFRFCSTPDCPSVYRVAGPQESG 1686

Query: 1649 EPFMCGACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSLSEWRKDKENVKNCPVCGYTI 1708
            EPF+CGAC+SE C RCHLEYHP ++CE+Y+ FKE+PD SL +W K K NVK CP+C  TI
Sbjct: 1687 EPFICGACHSEICTRCHLEYHPLITCERYKKFKENPDLSLKDWAKGK-NVKECPICKSTI 1746

Query: 1709 EKMDGCNHVECRCGRHICWVCLEYFGSSDECYIHLRSIH 1720
            EK DGCNH++CRCG+HICW CL+ F   + CY HLR+IH
Sbjct: 1747 EKTDGCNHMKCRCGKHICWTCLDVFTQEEPCYAHLRTIH 1768

[Close]

BLAST of Lsi05G008150 vs. TAIR10
Match: AT4G01020.1 (AT4G01020.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related)

HSP 1 Score: 1841.6 bits (4769), Expect = 0.0e+00
Identity = 933/1749 (53.34%), Postives = 1236/1749 (70.67%), Query Frame = 1


Query: 3    SSSSTAFRPPDSSFRCTRASNLHYLPRSPNTGPSTPDYPAQFRKFSGQQTSPNRANFVID 62
            +S S    PP +   CT  +  H    + N  P+     A    FS   T   R NF++ 
Sbjct: 31   NSRSAQSSPPLN--HCTTWNQQHSQYHNTNFPPNYRRDRAPSSGFSPPVTRA-RPNFIVQ 90

Query: 63   LV------LEHRGVLKSSVEDLIAKCNSKPDNFIVPHVGSVSAFMYFKQWVSALEAMVEL 122
            L+       + +   K  +E +   C    ++  VP  G ++A   F+QWV A  A+V L
Sbjct: 91   LLHPAAANSDTKLSKKQEIESIALLCEIPEESVHVPQFGCIAASFSFRQWVDARSAVVAL 150

Query: 123  WELRLDGLHGFTPILKPRINLPSDFDELHDRLRNLFAERIKRLMD-GEKVRHWQNKCDLV 182
            W+ RL G H F P L P + +PSD DEL DRLR+LF+  +  LM+ G+ V+  + + D  
Sbjct: 151  WDYRLQGRHDFVPELIPNVVVPSDMDELKDRLRDLFSSHVLSLMENGQGVKKVRMEID-- 210

Query: 183  MDEIDRILDMLRRPLRIATVFELKEKKKGLLIEKKSIMRKVEEFNSAMRYILDYVEGKK- 242
                D+   +     +    FE+ EKKK L  E+  ++ +++EFN+AM+ IL Y+ G+  
Sbjct: 211  ----DKSRQVASFSSKRGLKFEVFEKKKALEAERDLVVNRLDEFNNAMKSILRYLIGQDG 270

Query: 243  ----LESSDSHDLGFFTFDETINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQCQQV 302
                ++  D  D+  F+ +   +W RIH LILRECRRLEDGLP+Y+ R++IL++I C+Q+
Sbjct: 271  YEFDVDDEDDEDVAVFSLEGAYDWRRIHYLILRECRRLEDGLPIYAYRRQILKKIHCEQI 330

Query: 303  MVLVGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISAVSLAHRVREESRGCYDDDDY 362
            MVL+GETGSGKSTQLVQFLADSG++AS+SIVCTQPRKI+A++L  RVREES GCY+++  
Sbjct: 331  MVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAMTLTDRVREESSGCYEENT- 390

Query: 363  ISCYPSFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALL 422
            +SC P+FSS ++  SK++YMTD+CLLQHYM D+ LS +SC+IIDEAHERSLNTDLLLALL
Sbjct: 391  VSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALL 450

Query: 423  KSLLMVRIDLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIKYVPSSDEGTSSSGI 482
            + LL  RIDL L+IMSATA+A+QLS+Y F CGI HV GRNFPV+I Y PS  E  S  G 
Sbjct: 451  RKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFPVEIVYSPSGTEENSVVGR 510

Query: 483  VASYVTDVVRMSSEIHWQEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQ 542
            +ASY  DVV+M+ EIH  EK GTILAFLTSQ EVEWACE F AP  + L  HGKLSF+EQ
Sbjct: 511  IASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFVAPSAIALPLHGKLSFEEQ 570

Query: 543  FRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQS 602
            F VFQ++PG+RKVIFATN+AETSLTIPGVKYVID G VK+SK+EP +GM+ILKVC+ SQS
Sbjct: 571  FMVFQNYPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQS 630

Query: 603  SANQRAGRAGRTEPGRCYRLYTESEFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDF 662
            SA QRAGRAGRTEPGRCYRLY++++F+ M+ N EPEIR+VHLGVA+LR+LALG+ N+  F
Sbjct: 631  SARQRAGRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRMLALGIDNIAAF 690

Query: 663  DFVDAPSAEAVDMAIRNLVQLGAITLNNKVYELTNEGCNLVKLGIEPRLGKLILSCFDCR 722
            +FVDAP  EA+ MAI+NLVQLGA+   N V ELT EG  LVKLG+EP+LGKLIL CF  R
Sbjct: 691  EFVDAPVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILGCFRHR 750

Query: 723  VRREGVVLAVLMTNASSIFCRVGRVEDKLKSDCQKVQFCHADGDLFTLLSVYKQYEALPK 782
            + +EG+VLA +M NASSIFCRVG  +DK+K+D  KVQFC+ +GDLFTLLSVYK++ +LP+
Sbjct: 751  MGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPR 810

Query: 783  EKKNKWCWENSINAKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNLKKC 842
            +++NKWCWENS+NAK+MRRC+D + ELE C+++EL ++ PSYW+W+P + + HD+ LK  
Sbjct: 811  DRRNKWCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHDKYLKMV 870

Query: 843  ILASLAENVAMFTGYDRLGYEVALTGQHVQLHPSCSLLIFSERPKWVVFGEILSITNEYL 902
            ILASLAENVAM+TGYD+LGYEVALT Q VQLHPSCSLL F ++P WVVFGE+LSI ++YL
Sbjct: 871  ILASLAENVAMYTGYDQLGYEVALTSQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYL 930

Query: 903  VCVTAFDVDALLTLSPPPLFDISNMEQHRLEGRVLSGFGKTLLKRVCGKSNSNLLSLTSH 962
            VCVTAFD +AL  L PPP FD S M++ RL  + + G   T+LKR CGKSN +LLS+ S 
Sbjct: 931  VCVTAFDFEALYMLDPPPPFDASQMDERRLRVKKVVGCSSTVLKRFCGKSNRSLLSIVSR 990

Query: 963  VQKVFSDNCIGIEVNINQNEILLFSRTENMDKVCHFVNDILEYERKYLLNECMEKCLYHG 1022
             + + SD  IGI+V+++QNEI L++   +M+KV   VND LE E+K++ NEC+EK L+HG
Sbjct: 991  ARSLCSDERIGIQVDVDQNEIRLYASPLDMEKVSALVNDALECEKKWMRNECLEKYLFHG 1050

Query: 1023 NGGSTPVALLGAGAKIRHLELEKRYLTVYAYRSNVDIIDDKEFFMSLEKFVSGTVCAIQK 1082
              G  P+AL G+GA+I+HLE+++R+LTV  +    D++DD+E    LEK + G +C+I K
Sbjct: 1051 R-GQIPIALFGSGAQIKHLEVDQRFLTVDVHYYGDDVVDDRELLTFLEKKIDGCICSIYK 1110

Query: 1083 VSCSGQDVDDKERGHRITFLTPDAAEKASKFDSDSFCGSLVKITPSQLTAGCDNKLFTFP 1142
             + + QD D+KE+  RITFLTP++A KA++     F GS++K+ PS  T G   K+  F 
Sbjct: 1111 FAANKQDCDEKEKWGRITFLTPESAMKATEIQKFDFKGSVLKVFPSLSTGGGIFKMPYFS 1170

Query: 1143 PVKAKVFWPRRLSKGFAVVKCNIYDVGFILNDFSNLQIGDRFLRSEPSIKYSDCVTISGI 1202
             V AK+ WPR+ S G   +KC   D+  IL D ++L+IG  ++  +     +D + ISG+
Sbjct: 1171 SVTAKIRWPRKESSGRGCLKCPSGDIHSILGDITSLEIGTNYVHIQRDQLSNDSILISGL 1230

Query: 1203 DKELSEADILNVLRSVTDRKILDLFLVREN-AVDNPPVHSCEEALLKEISPFMPKSNPHA 1262
              +LSEA++L+VL   T R+ L+ F+ R+  +V  P   +CEE L K I   M   NP  
Sbjct: 1231 G-DLSEAEVLDVLEFRTQRRDLNFFIFRKKYSVQCPSPTACEEELHKRIFARMSAKNPEP 1290

Query: 1263 KCCHVQVFPPQPKDFYMRAAINFDGRLHLEAAKALECLEGKAL----------------S 1322
             C  VQVF P+  +++MRA I FDGRLHLEAAKAL+ L G+ L                S
Sbjct: 1291 NCVQVQVFEPKEDNYFMRALIKFDGRLHLEAAKALQELNGEVLPGCLPWQKIKCEQLFQS 1350

Query: 1323 VGELDEDYYSLVWSDSDDL--ESSCQPGVECTLSQNVNGSYRVKLSANATKTVAELRRPV 1382
                    Y+ V    + L      Q G EC L    NG+YRVK++A AT+ VAE+RR +
Sbjct: 1351 SIICSASIYNTVKRQLNVLLARFERQKGGECCLEPTHNGAYRVKITAYATRPVAEMRREL 1410

Query: 1383 EELLRGKIIDHASLTPTVLQHLTSRAGFDLINFLQRENGVYILFDRQRLSLRIFGASEKI 1442
            EELLRGK I+H   TP V+QHL SR G +L+  +Q+E   YIL DR  L++RI G SEKI
Sbjct: 1411 EELLRGKPINHPGFTPRVVQHLMSRDGINLMRKIQQETETYILLDRHNLTVRICGTSEKI 1470

Query: 1443 AEAEQKLIQSLQTIHESKQLEIHLRGKSLPPNLLKAVVEKFGPDLNGLKQKFPGAGFTLN 1502
            A+AEQ+L+QSL   HESKQLEIHLRG  + P+L+K VV++FGP+L G+K+K  G    LN
Sbjct: 1471 AKAEQELVQSLMDYHESKQLEIHLRGPEIRPDLMKEVVKRFGPELQGIKEKVHGVDLKLN 1530

Query: 1503 TRRHILYVQGSKDLKQEVETIIFELAKMSGGSAERPDDAD-ACPICLCDIEDDRFELEAC 1562
            TR H++ V GSK+++QEV+ ++ ELA+      E+PD+ +  CPICL ++ DD + LE C
Sbjct: 1531 TRYHVIQVHGSKEMRQEVQKMVNELAREKSALGEKPDEIELECPICLSEV-DDGYSLEGC 1590

Query: 1563 GHHFCRQCLVEQFESAIKNQGRFPVCCAKQKCESPILLADMRTLLSSEKLEELFRASLGA 1622
             H FC+ CL+EQFE++++N   FP+ C+   C +PI++ADMR LLS EKL+EL  ASL A
Sbjct: 1591 SHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVVADMRALLSQEKLDELISASLSA 1650

Query: 1623 FVASSDGAYRFCPSPDCPSVYRVASPDMSGEPFMCGACYSETCNRCHLEYHPFLSCEQYR 1682
            FV SSDG  RFC +PDCPS+YRVA P  SGEPF+CGAC+SETC RCHLEYHP ++CE+Y+
Sbjct: 1651 FVTSSDGKLRFCSTPDCPSIYRVAGPQESGEPFICGACHSETCTRCHLEYHPLITCERYK 1710

Query: 1683 VFKEDPDSSLSEWRKDKENVKNCPVCGYTIEKMDGCNHVECRCGRHICWVCLEYFGSSDE 1720
             FKE+PD SL +W K K+ VK CP+C  TIEK DGCNH++CRCG+HICW CL+ F  ++ 
Sbjct: 1711 KFKENPDLSLKDWAKGKD-VKECPICKSTIEKTDGCNHLQCRCGKHICWTCLDVFTQAEP 1765

[Close]

BLAST of Lsi05G008150 vs. TAIR10
Match: AT3G26560.1 (AT3G26560.1 ATP-dependent RNA helicase, putative)

HSP 1 Score: 406.4 bits (1043), Expect = 9.0e-113
Identity = 255/745 (34.23%), Postives = 416/745 (55.84%), Query Frame = 1


Query: 197  ELKEKKKGLLIEK--KSIMRKVEEF--NSAMRYILDYVEGKKLESSDSHDLGFFTFDETI 256
            E++E+++  +++   K + R  E+    +  R++   + G  L + D  +     F +T 
Sbjct: 439  EMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKTP 498

Query: 257  NWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQCQQVMVLVGETGSGKSTQLVQFLADS 316
             + +   L ++E R   + LP+Y  ++E+++ +   QV+V++GETGSGK+TQ+ Q+LA++
Sbjct: 499  TFGQRSKLSIQEQR---ESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA 558

Query: 317  GLSASKSIVCTQPRKISAVSLAHRVREESRGCYDDDDYISCYPSFSSAQQFKSKIIYMTD 376
            G +    I CTQPR+++A+S+A RV EE  GC   ++ +     F       + I YMTD
Sbjct: 559  GYTTKGKIGCTQPRRVAAMSVAKRVAEEF-GCRLGEE-VGYAIRFEDCTGPDTVIKYMTD 618

Query: 377  HCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANAD 436
              LL+  + D+ LS  S I++DEAHER+++TD+L  LLK L+  R+DL LI+ SAT +A+
Sbjct: 619  GMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAE 678

Query: 437  QLSKYFFGCGIFHVPGRNFPVDIKYVPSSDEGTSSSGIVASYVTDVVRMSSEIHWQEKGG 496
            + S YFF C IF +PGR FPV+I Y    +           Y+   +    +IH  E  G
Sbjct: 679  KFSGYFFNCNIFTIPGRTFPVEILYTKQPE---------TDYLDAALITVLQIHLTEPEG 738

Query: 497  TILAFLTSQMEVEWACENFH---------APGTVPLAFHGKLSFDEQFRVFQDHP-GKRK 556
             IL FLT Q E++ AC++ +          P  + L  +  L  + Q R+F   P GKRK
Sbjct: 739  DILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRK 798

Query: 557  VIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRT 616
            V+ ATN+AE SLTI G+ YV+DPG+ K + + P  G+  L +   SQ+SA QRAGRAGRT
Sbjct: 799  VVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRT 858

Query: 617  EPGRCYRLYTESEF-ELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAV 676
             PG+CYRLYTES +   M P   PEI++++LG+  L + A+G+ ++  FDF+D P  +A+
Sbjct: 859  GPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQAL 918

Query: 677  DMAIRNLVQLGAITLNNKVYELTNEGCNLVKLGIEPRLGKLILSCFDCRVRREGVVLAVL 736
              A+  L  LGA+   ++   LT  G  + +  +EP L K++L+  D     E ++  + 
Sbjct: 919  ISAMEQLYSLGAL---DEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDE-ILTMIA 978

Query: 737  MTNASSIFCRVGRVEDKLKSDCQKVQFCHADGDLFTLLSVYKQYEALPKEKKNKWCWENS 796
            M    +IF R    E + ++D ++ +F   +GD  TLL+VY+ ++A  K     WC+EN 
Sbjct: 979  MIQTGNIFYRPR--EKQAQADQKRAKFFQPEGDHLTLLAVYEAWKA--KNFSGPWCFENF 1038

Query: 797  INAKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNLKKCILASLAENVAM 856
            I ++++RR QD        ++++L  I+  Y L   +    +   ++K I A    + A 
Sbjct: 1039 IQSRSLRRAQD--------VRKQLLSIMDKYKL-DVVTAGKNFTKIRKAITAGFFFHGAR 1098

Query: 857  FTGYDRLGYEVALTGQHVQLHPSCSLLIFSERPKWVVFGEILSITNEYLVCVTAFDVDAL 916
                +  GY   +  Q V +HPS +L  F  +P WV++ +++  T EY+  VT  D   L
Sbjct: 1099 KDPQE--GYRTLVENQPVYIHPSSAL--FQRQPDWVIYHDLVMTTKEYMREVTVIDPKWL 1148

Query: 917  LTLSPP--PLFDISNMEQHRLEGRV 925
            + L+P    + D + M + + + R+
Sbjct: 1159 VELAPRFFKVSDPTKMSKRKRQERI 1148

[Close]

BLAST of Lsi05G008150 vs. TAIR10
Match: AT5G13010.1 (AT5G13010.1 RNA helicase family protein)

HSP 1 Score: 359.8 bits (922), Expect = 9.6e-99
Identity = 239/670 (35.67%), Postives = 360/670 (53.73%), Query Frame = 1


Query: 272  LPMYSCRQEILRQIQCQQVMVLVGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISAV 331
            LP++S R E+L+ I+  QV+V+VGETGSGK+TQL Q+L + G + +  + CTQPR+++A+
Sbjct: 558  LPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHEDGYTINGIVGCTQPRRVAAM 617

Query: 332  SLAHRVREESRGCYDDDDYISCYPSFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCI 391
            S+A RV EE     +  D I     F       + I YMTD  LL+  + D  L     +
Sbjct: 618  SVAKRVSEEMET--ELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVV 677

Query: 392  IIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSKYFFGCGIFHVPGRNF 451
            ++DEAHERSLNTD+L  +LK ++  R D  LI+ SAT NA + S +F    IF++PGR F
Sbjct: 678  VMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFNIPGRTF 737

Query: 452  PVDIKYVPSSDEGTSSSGIVASYVTDVVRMSSEIHWQEKGGTILAFLTSQMEVEWACENF 511
            PV+I Y  +  E          YV   V+ +  IH     G IL F+T Q E+E AC + 
Sbjct: 738  PVNILYSKTPCE---------DYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSL 797

Query: 512  -------------HAPGTVPLAFHGKLSFDEQFRVFQD-HPGKRKVIFATNLAETSLTIP 571
                              + L  + +L  D Q ++FQ    G RK I ATN+AETSLT+ 
Sbjct: 798  KERMEQLVSSSSREITNLLILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVD 857

Query: 572  GVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRTEPGRCYRLYTESEF- 631
            G+ YVID G+ K   F P  GM+ L+V   S+++++QRAGRAGRT PG CYRLYTES + 
Sbjct: 858  GIYYVIDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYL 917

Query: 632  ELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAIRNLVQLGAITL 691
              M P+  PEI++ +LG  +L + +L + N+ DFDF+D P  E +  ++  L  LGA+  
Sbjct: 918  NEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGAL-- 977

Query: 692  NNKVYELTNEGCNLVKLGIEPRLGKLIL--SCFDCRVRREGVVLAVLMTNASSIFCRVGR 751
             N V  LT+ G  +V+  ++P L K++L     DC    + V+  V M +  S+F R   
Sbjct: 978  -NNVGGLTDLGWKMVEFPLDPPLAKMLLMGERLDC---IDEVLTIVSMLSVPSVFFR--P 1037

Query: 752  VEDKLKSDCQKVQFCHADGDLFTLLSVYKQYEALPKEKKNKWCWENSINAKTMRRCQDA- 811
             E   +SD  + +F   + D  TLL+VY+Q++    + +  WC ++ +  K +R+ ++  
Sbjct: 1038 KERAEESDAAREKFFVPESDHLTLLNVYQQWK--EHDYRGDWCNDHYLQVKGLRKAREVR 1097

Query: 812  --ILELERCLKQELHIIIPSYWLWSPLKPSDHDRNLKKCILASLAENVAMFTGYDRLGYE 871
              +L++ + LK EL    P + +            ++K I ++   N A   G     Y 
Sbjct: 1098 SQLLDILKQLKIELRSCGPDWDI------------VRKAICSAYFHNSARLKGVGE--YV 1157

Query: 872  VALTGQHVQLHPSCSLLIFSERPKWVVFGEILSITNEYLVCVTAFDVDALLTLSPPPLFD 922
               TG    LHPS +L      P +VV+ E++  T EY+ C T+ +   L  L  P  F 
Sbjct: 1158 NCRTGMPCHLHPSSALYGLGYTPDYVVYHELILTTKEYMQCATSVEPHWLAELG-PMFFS 1191

[Close]

BLAST of Lsi05G008150 vs. TAIR10
Match: AT1G32490.1 (AT1G32490.1 RNA helicase family protein)

HSP 1 Score: 352.8 bits (904), Expect = 1.2e-96
Identity = 226/658 (34.35%), Postives = 360/658 (54.71%), Query Frame = 1


Query: 262  LRECRRLEDGLPMYSCRQEILRQIQCQQVMVLVGETGSGKSTQLVQFLADSGLSASKSIV 321
            L E + +   LP+Y+ R ++L+ ++  QV+V+VG+TGSGK+TQ+ Q+L ++G +    + 
Sbjct: 394  LEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVG 453

Query: 322  CTQPRKISAVSLAHRVREESRGCYDDDDYISCYPSFSSAQQFKSKIIYMTDHCLLQHYMN 381
            CTQPR+++A+S+A RV +E       +   S    F      K+ + YMTD  LL+  + 
Sbjct: 454  CTQPRRVAAMSVAARVAQEMGVKLGHEVGYSI--RFEDCTSDKTVLKYMTDGMLLRELLG 513

Query: 382  DKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSKYFFGC 441
            +  L+  S +I+DEAHER+L+TD+L  L+K +   R DL L+I SAT +A++ S YF   
Sbjct: 514  EPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFDTA 573

Query: 442  GIFHVPGRNFPVDIKYVPSSDEGTSSSGIVASYVTDVVRMSSEIHWQEKGGTILAFLTSQ 501
             IF  PGR +PV+I Y  + +         A Y+   +     IH +E  G IL F T Q
Sbjct: 574  PIFSFPGRRYPVEINYTSAPE---------ADYMDAAIVTILTIHVREPLGDILVFFTGQ 633

Query: 502  MEVEWACE----NFHAPGT-----VPLAFHGKLSFDEQFRVFQDHP-GKRKVIFATNLAE 561
             E+E A E         GT     +    +  L  + Q ++F+  P G RKV+ ATN+AE
Sbjct: 634  EEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAE 693

Query: 562  TSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRTEPGRCYRLY 621
            TSLTI G+KYV+DPG+ K   + P +GM  L +   S++SA QRAGRAGRT PG+CYRLY
Sbjct: 694  TSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLY 753

Query: 622  TESEFEL-MSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAIRNLVQ 681
            T   +   +  N  PE+++ +L   +L + +LG+ ++ +FDF+D P AEA+  ++  L  
Sbjct: 754  TAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFA 813

Query: 682  LGAITLNNKVYELTNEGCNLVKLGIEPRLGKLILSCFDCRVRREGVVLAVLMTNASSIFC 741
            LGA+   NK+ ELT  G  + +  ++P L K+I+     +   E + +A +++   SIF 
Sbjct: 814  LGAL---NKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFY 873

Query: 742  RVGRVEDKLKSDCQKVQFCHAD-GDLFTLLSVYKQYEALPKEKKNKWCWENSINAKTMRR 801
            R    + ++ +D  ++ F   + GD   LL VY  ++        +WC+EN I  ++M+R
Sbjct: 874  R--PKDKQVHADNARMNFHTGNVGDHIALLKVYSSWK--ETNFSTQWCYENYIQVRSMKR 933

Query: 802  CQDAILELERCLKQ-ELHIIIPSYWLWSPLKPSDHDRNLKKCILASLAENVAMFTGYDRL 861
             +D   +LE  L++ E+ I        S L   D   +++K I+A    + A        
Sbjct: 934  ARDIRDQLEGLLERVEIDIS-------SNLNELD---SVRKSIVAGFFPHTAKL--QKNG 993

Query: 862  GYEVALTGQHVQLHPSCSLLIFSERPKWVVFGEILSITNEYLVCVTAFDVDALLTLSP 907
             Y      Q V +HP+  L      P+WVV+ E++  + EY+  VT    + L+ L+P
Sbjct: 994  SYRTVKHPQTVHIHPNSGL--SQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAP 1019

[Close]

BLAST of Lsi05G008150 vs. NCBI nr
Match: gi|659111185|ref|XP_008455623.1| (PREDICTED: putative uncharacterized protein At4g01020, chloroplastic [Cucumis melo])

HSP 1 Score: 3118.9 bits (8085), Expect = 0.0e+00
Identity = 1542/1741 (88.57%), Postives = 1607/1741 (92.30%), Query Frame = 1


Query: 1    MKSSSSTAFRPPDSSFRCTRASNLHYLPRSPNTGPSTPDYPAQFRKFSGQQTSPNRANFV 60
            MKSSSSTA RPPDSSFRC R SNLH+LPRSPN      D P+   KFS QQ  PNRANF 
Sbjct: 1    MKSSSSTASRPPDSSFRCNRPSNLHFLPRSPNAS----DLPS---KFSAQQNCPNRANFA 60

Query: 61   IDLVLEHRGVLKSSVEDLIAKCNSKPDNFIVPHVGSVSAFMYFKQWVSALEAMVELWELR 120
            IDLVLEHR + K SVE LI+KC SKPDNFI+P  GSVSAF++FKQWVSALE+MV LWELR
Sbjct: 61   IDLVLEHRTLSKCSVELLISKCISKPDNFIIPQAGSVSAFLFFKQWVSALESMVGLWELR 120

Query: 121  LDGLHGFTPILKPRINLPSDFDELHDRLRNLFAERIKRLMDGEKVRHWQNKCDLVMDEID 180
            L+G H FTPILKPRINLPSD DELH RLRNLFAERIKRLMDG+KVRHWQNK DLV+ +ID
Sbjct: 121  LNGFHDFTPILKPRINLPSDVDELHGRLRNLFAERIKRLMDGDKVRHWQNKYDLVLVQID 180

Query: 181  RILDMLRRPLRIATVFELKEKKKGLLIEKKSIMRKVEEFNSAMRYILDYVEGKKLESSDS 240
            RI D+LRRPLR    FEL EKKKGLL+EK+SIMRK+EEFNSAM +ILD+VEGKK+E+SDS
Sbjct: 181  RISDILRRPLRTDAAFELNEKKKGLLVEKESIMRKMEEFNSAMHHILDHVEGKKVETSDS 240

Query: 241  HDLGFFTFDETINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQCQQVMVLVGETGSG 300
             D+G FTFD TINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQ QQVMVL+GETGSG
Sbjct: 241  LDMGIFTFDGTINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQYQQVMVLIGETGSG 300

Query: 301  KSTQLVQFLADSGLSASKSIVCTQPRKISAVSLAHRVREESRGCYDDDDYISCYPSFSSA 360
            KSTQLVQFLADSGLS SKSIVCTQPRKISAV LAHRVREESRGCY DDDYISCYPSFSSA
Sbjct: 301  KSTQLVQFLADSGLSGSKSIVCTQPRKISAVLLAHRVREESRGCYYDDDYISCYPSFSSA 360

Query: 361  QQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDL 420
            QQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDL
Sbjct: 361  QQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDL 420

Query: 421  HLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIKYVPSSDEGTSSSGIVASYVTDVVR 480
            HLIIMSATANADQLSKYFF CGIF VPGR+FPVDIKYVPSS+EGTS S IV SYVTDVV+
Sbjct: 421  HLIIMSATANADQLSKYFFRCGIFRVPGRSFPVDIKYVPSSNEGTSGSCIVPSYVTDVVQ 480

Query: 481  MSSEIHWQEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGK 540
            M+SEIHWQEKGG ILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGK
Sbjct: 481  MASEIHWQEKGGAILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGK 540

Query: 541  RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAG 600
            RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAG
Sbjct: 541  RKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAG 600

Query: 601  RTEPGRCYRLYTESEFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEA 660
            RTEPGRCYRLYTESEFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEA
Sbjct: 601  RTEPGRCYRLYTESEFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEA 660

Query: 661  VDMAIRNLVQLGAITLNNKVYELTNEGCNLVKLGIEPRLGKLILSCFDCRVRREGVVLAV 720
            VDMAIRNL+QLGAITLNNKVYELTNEG NLVKLGIEPRLGKLILSCFDCRVRREGVVLAV
Sbjct: 661  VDMAIRNLIQLGAITLNNKVYELTNEGSNLVKLGIEPRLGKLILSCFDCRVRREGVVLAV 720

Query: 721  LMTNASSIFCRVGRVEDKLKSDCQKVQFCHADGDLFTLLSVYKQYEALPKEKKNKWCWEN 780
            LMTNASSIFCRVGRVEDKLKSDCQKVQFCH DGDLFTLLSVYKQYEALPKE+KN+WCWEN
Sbjct: 721  LMTNASSIFCRVGRVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPKERKNRWCWEN 780

Query: 781  SINAKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNLKKCILASLAENVA 840
            SINAKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRN+KKCIL SLAENVA
Sbjct: 781  SINAKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNIKKCILGSLAENVA 840

Query: 841  MFTGYDRLGYEVALTGQHVQLHPSCSLLIFSERPKWVVFGEILSITNEYLVCVTAFDVDA 900
            MFTGYDRLGYEVA+TGQHVQLHPSCSLLIFSERPKWVVF EILSI NEYL+CVTAFDVDA
Sbjct: 841  MFTGYDRLGYEVAMTGQHVQLHPSCSLLIFSERPKWVVFSEILSIVNEYLICVTAFDVDA 900

Query: 901  LLTLSPPPLFDISNMEQHRLEGRVLSGFGKTLLKRVCGKSNSNLLSLTSHVQKVFSDNCI 960
            LLTLSPPPLFDISNME+HRLEGRVLSGFGKT+LKRVCGKSNSNLLSLTSHV+KVFSDNCI
Sbjct: 901  LLTLSPPPLFDISNMEKHRLEGRVLSGFGKTVLKRVCGKSNSNLLSLTSHVRKVFSDNCI 960

Query: 961  GIEVNINQNEILLFSRTENMDKVCHFVNDILEYERKYLLNECMEKCLYHGNGGSTPVALL 1020
            GIEVNINQNE++LFSRTENMD+VCHFVND+LEYERKYLLNECMEKCLYHGNGGSTPVALL
Sbjct: 961  GIEVNINQNELMLFSRTENMDEVCHFVNDVLEYERKYLLNECMEKCLYHGNGGSTPVALL 1020

Query: 1021 GAGAKIRHLELEKRYLTVYAYRSNVDIIDDKEFFMSLEKFVSGTVCAIQKVSCSGQDVDD 1080
            GAGAKIRHLELEKRYLTVYA+R NVD IDDKEFF SLE FVSGT+C+IQKV  SG DVDD
Sbjct: 1021 GAGAKIRHLELEKRYLTVYAFRLNVDSIDDKEFFTSLENFVSGTICSIQKVPNSGLDVDD 1080

Query: 1081 KERGHRITFLTPDAAEKASKFDSDSFCGSLVKITPSQLTAGCDNKLFTFPPVKAKVFWPR 1140
            + RG+RITFLTPDAAEKASK D DSFCGSL+KI PSQLTAGCDNK+FTFPPVKAKVFWPR
Sbjct: 1081 RGRGYRITFLTPDAAEKASKIDCDSFCGSLMKIIPSQLTAGCDNKMFTFPPVKAKVFWPR 1140

Query: 1141 RLSKGFAVVKCNIYDVGFILNDFSNLQIGDRFLRSEPSIKYSDCVTISGIDKELSEADIL 1200
            RLSKGFAVVKCNI DVGFILNDFS+L IG RFLR EPSIKY+DCVTISGIDKELSEADIL
Sbjct: 1141 RLSKGFAVVKCNINDVGFILNDFSSLLIGGRFLRCEPSIKYNDCVTISGIDKELSEADIL 1200

Query: 1201 NVLRSVTDRKILDLFLVRENAVDNPPVHSCEEALLKEISPFMPKSNPHAKCCHVQVFPPQ 1260
            NVLR+ TDRKILDLFLVRENAVDNPPV+SCEE+LLKEISPFMPKSNPH KCC VQVFPPQ
Sbjct: 1201 NVLRTATDRKILDLFLVRENAVDNPPVNSCEESLLKEISPFMPKSNPHVKCCRVQVFPPQ 1260

Query: 1261 PKDFYMRAAINFDGRLHLEAAKALECLEGKALSVG----------------ELDEDYYSL 1320
            PKDFYM+AAI FDGRLHLEAAKALE LEGKAL V                       Y +
Sbjct: 1261 PKDFYMKAAITFDGRLHLEAAKALEFLEGKALPVCLPWQKIKCQQLFHSTLSCTIPIYRV 1320

Query: 1321 VWSDSDDLESSCQ--PGVECTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIIDH 1380
            +    + L  S +   GVECTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIID 
Sbjct: 1321 IKHQLNSLLESFRRIDGVECTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIIDD 1380

Query: 1381 ASLTPTVLQHLTSRAGFDLINFLQRENGVYILFDRQRLSLRIFGASEKIAEAEQKLIQSL 1440
            ASLTPTV+QHLTSR GFDLIN LQRENGVYILFDRQRL LRIFGASE IA AEQKLIQSL
Sbjct: 1381 ASLTPTVVQHLTSRDGFDLINLLQRENGVYILFDRQRLGLRIFGASENIAAAEQKLIQSL 1440

Query: 1441 QTIHESKQLEIHLRGKSLPPNLLKAVVEKFGPDLNGLKQKFPGAGFTLNTRRHILYVQGS 1500
            + IHESKQLEIHLRGKS P NLLKAVVEKFGPDLNGLKQKFPGAGFTLNTRRHILYVQGS
Sbjct: 1441 RLIHESKQLEIHLRGKSWPSNLLKAVVEKFGPDLNGLKQKFPGAGFTLNTRRHILYVQGS 1500

Query: 1501 KDLKQEVETIIFELAKMSGGSAERPDDADACPICLCDIEDDRFELEACGHHFCRQCLVEQ 1560
            KDLKQEVETI+FELA MSGGS ERPDDAD CPICLCDIEDDRFELEACG HFCRQCLVEQ
Sbjct: 1501 KDLKQEVETIVFELAAMSGGSGERPDDADCCPICLCDIEDDRFELEACGDHFCRQCLVEQ 1560

Query: 1561 FESAIKNQGRFPVCCAKQKCESPILLADMRTLLSSEKLEELFRASLGAFVASSDGAYRFC 1620
            FESAIKNQGRFPVCCAKQKC +PI+LADMRTLLSSEKLEELFRASLGAF+ASSDGAYRFC
Sbjct: 1561 FESAIKNQGRFPVCCAKQKCGTPIVLADMRTLLSSEKLEELFRASLGAFIASSDGAYRFC 1620

Query: 1621 PSPDCPSVYRVASPDMSGEPFMCGACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSLSE 1680
            PSPDCPSVYRVA P+M GEPFMC ACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSL E
Sbjct: 1621 PSPDCPSVYRVARPNMPGEPFMCEACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSLKE 1680

Query: 1681 WRKDKENVKNCPVCGYTIEKMDGCNHVECRCGRHICWVCLEYFGSSDECYIHLRSIHMTI 1724
            WRK KENVKNCPVCGYTIEK +GCNHVECRCGRHICWVCLEYFGSSDECY HL S+HMTI
Sbjct: 1681 WRKGKENVKNCPVCGYTIEKTEGCNHVECRCGRHICWVCLEYFGSSDECYAHLGSVHMTI 1734

[Close]

BLAST of Lsi05G008150 vs. NCBI nr
Match: gi|449439023|ref|XP_004137287.1| (PREDICTED: putative uncharacterized protein At4g01020, chloroplastic [Cucumis sativus])

HSP 1 Score: 3092.4 bits (8016), Expect = 0.0e+00
Identity = 1528/1739 (87.87%), Postives = 1598/1739 (91.89%), Query Frame = 1


Query: 3    SSSSTAFRPPDSSFRCTRASNLHYLPRSPNTGPSTPDYPAQFRKFSGQQTSPNRANFVID 62
            SSSSTA RPPDSSFR  R SNLHYLPRSPN      D+P+   KFS QQ  PNRANF ID
Sbjct: 4    SSSSTASRPPDSSFRTIRPSNLHYLPRSPNAS----DFPS---KFSAQQNCPNRANFAID 63

Query: 63   LVLEHRGVLKSSVEDLIAKCNSKPDNFIVPHVGSVSAFMYFKQWVSALEAMVELWELRLD 122
            LVLEHR + K SVE LIAKC SKPDN+I+P VGSV+AF++FKQWVSALE MV LWELRL 
Sbjct: 64   LVLEHRTLSKCSVELLIAKCISKPDNYIIPQVGSVAAFLFFKQWVSALEYMVALWELRLT 123

Query: 123  GLHGFTPILKPRINLPSDFDELHDRLRNLFAERIKRLMDGEKVRHWQNKCDLVMDEIDRI 182
            G H FTPILKPRINLPSD DELH+RL+NLFAERIK LMDG+KVRHWQNK DLVM +I+RI
Sbjct: 124  GFHDFTPILKPRINLPSDVDELHERLQNLFAERIKLLMDGDKVRHWQNKYDLVMVQINRI 183

Query: 183  LDMLRRPLRIATVFELKEKKKGLLIEKKSIMRKVEEFNSAMRYILDYVEGKKLESSDSHD 242
             D LRRPLRI   F+L EKKKGLL+EK+SI+RK+EEFNSAMRYILD+VEGKKLE+SDSH 
Sbjct: 184  SDTLRRPLRIDAAFKLNEKKKGLLVEKESIVRKMEEFNSAMRYILDHVEGKKLETSDSHG 243

Query: 243  LGFFTFDETINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQCQQVMVLVGETGSGKS 302
            +G FTFD TINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQ QQVMVL+GETGSGKS
Sbjct: 244  MGIFTFDGTINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQYQQVMVLIGETGSGKS 303

Query: 303  TQLVQFLADSGLSASKSIVCTQPRKISAVSLAHRVREESRGCYDDDDYISCYPSFSSAQQ 362
            TQLVQFLADSGLS SKSIVCTQPRKISAVSLAHRV EESRGCY+DDDY+SCYPSFSSAQQ
Sbjct: 304  TQLVQFLADSGLSGSKSIVCTQPRKISAVSLAHRVSEESRGCYNDDDYMSCYPSFSSAQQ 363

Query: 363  FKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHL 422
            FKSKIIYMTDHCLLQHYMNDKKLS VS IIIDEAHERSL+TDLLLALLKSLLMVRIDLHL
Sbjct: 364  FKSKIIYMTDHCLLQHYMNDKKLSGVSYIIIDEAHERSLSTDLLLALLKSLLMVRIDLHL 423

Query: 423  IIMSATANADQLSKYFFGCGIFHVPGRNFPVDIKYVPSSDEGTSSSGIVASYVTDVVRMS 482
            IIMSATANADQLSKYFF CGIF VPGR+FPVDIKYVPSS+EG S S IV SYV DVVRM+
Sbjct: 424  IIMSATANADQLSKYFFRCGIFRVPGRSFPVDIKYVPSSNEGISGSCIVPSYVNDVVRMA 483

Query: 483  SEIHWQEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRK 542
             EIHWQEK G ILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRK
Sbjct: 484  YEIHWQEKEGAILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRK 543

Query: 543  VIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRT 602
            VIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRT
Sbjct: 544  VIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRT 603

Query: 603  EPGRCYRLYTESEFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVD 662
            EPGRCYRLYTESEFELMSPNHEPEIRKVHLG+AILRILALGVKNVDDFDFVDAPSAEAVD
Sbjct: 604  EPGRCYRLYTESEFELMSPNHEPEIRKVHLGIAILRILALGVKNVDDFDFVDAPSAEAVD 663

Query: 663  MAIRNLVQLGAITLNNKVYELTNEGCNLVKLGIEPRLGKLILSCFDCRVRREGVVLAVLM 722
            MAIRNLVQLGAITLNNKVYELTNEG NLVKLGIEPRLGKLILSCFDCRVRREGVVL+VLM
Sbjct: 664  MAIRNLVQLGAITLNNKVYELTNEGRNLVKLGIEPRLGKLILSCFDCRVRREGVVLSVLM 723

Query: 723  TNASSIFCRVGRVEDKLKSDCQKVQFCHADGDLFTLLSVYKQYEALPKEKKNKWCWENSI 782
            TNASSIFCRVGRVEDKLKSDCQKVQFCH DGDLFTLLSVYKQYEALPKE+KN+WCWENSI
Sbjct: 724  TNASSIFCRVGRVEDKLKSDCQKVQFCHPDGDLFTLLSVYKQYEALPKERKNRWCWENSI 783

Query: 783  NAKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNLKKCILASLAENVAMF 842
            NAKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRN+KKCIL SLAENVAMF
Sbjct: 784  NAKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNIKKCILGSLAENVAMF 843

Query: 843  TGYDRLGYEVALTGQHVQLHPSCSLLIFSERPKWVVFGEILSITNEYLVCVTAFDVDALL 902
            TGYDRLGYEVA+TGQHVQLHPSCSLLIFSERPKWVVFGEILSI NEYLVCVTAFD D LL
Sbjct: 844  TGYDRLGYEVAMTGQHVQLHPSCSLLIFSERPKWVVFGEILSIFNEYLVCVTAFDADDLL 903

Query: 903  TLSPPPLFDISNMEQHRLEGRVLSGFGKTLLKRVCGKSNSNLLSLTSHVQKVFSDNCIGI 962
            TLSPPPLF+ISNME+HRLEGRVLSGFGKT+LKRVCGKSNSNLLSLT+HV+KVFSDNCIGI
Sbjct: 904  TLSPPPLFNISNMEKHRLEGRVLSGFGKTVLKRVCGKSNSNLLSLTAHVRKVFSDNCIGI 963

Query: 963  EVNINQNEILLFSRTENMDKVCHFVNDILEYERKYLLNECMEKCLYHGNGGSTPVALLGA 1022
            EVNINQNE++LFSRTENMD+VCHFVND+LEYERKYLLNECMEKCLYHGNGGSTPVALLGA
Sbjct: 964  EVNINQNEVMLFSRTENMDEVCHFVNDVLEYERKYLLNECMEKCLYHGNGGSTPVALLGA 1023

Query: 1023 GAKIRHLELEKRYLTVYAYRSNVDIIDDKEFFMSLEKFVSGTVCAIQKVSCSGQDVDDKE 1082
            GAKIRHLELEKRYLTVYA   NVD IDDKEFF SLE FVSGT+C IQKV  SG DVD+KE
Sbjct: 1024 GAKIRHLELEKRYLTVYALCLNVDSIDDKEFFTSLENFVSGTICGIQKVPNSGHDVDNKE 1083

Query: 1083 RGHRITFLTPDAAEKASKFDSDSFCGSLVKITPSQLTAGCDNKLFTFPPVKAKVFWPRRL 1142
            RG+RITFLTPDAAEKASK D DSFCGSL+KI PS+LTAGCDNK+FTFPPVKAKVFWPRRL
Sbjct: 1084 RGYRITFLTPDAAEKASKIDCDSFCGSLMKIIPSRLTAGCDNKMFTFPPVKAKVFWPRRL 1143

Query: 1143 SKGFAVVKCNIYDVGFILNDFSNLQIGDRFLRSEPSIKYSDCVTISGIDKELSEADILNV 1202
            SKGFAVVKCNI DVGF+LNDFS+L IG RFLR EPSIKY+DCVTISGIDKELSEADILNV
Sbjct: 1144 SKGFAVVKCNINDVGFVLNDFSSLLIGGRFLRCEPSIKYNDCVTISGIDKELSEADILNV 1203

Query: 1203 LRSVTDRKILDLFLVRENAVDNPPVHSCEEALLKEISPFMPKSNPHAKCCHVQVFPPQPK 1262
            LR+ TDRKILDLFLVRENAVDNPPV+SCEE+LLKEISPFMPK NPH KCC VQVFPPQPK
Sbjct: 1204 LRTTTDRKILDLFLVRENAVDNPPVNSCEESLLKEISPFMPKLNPHVKCCRVQVFPPQPK 1263

Query: 1263 DFYMRAAINFDGRLHLEAAKALECLEGKALSVG----------------ELDEDYYSLVW 1322
            DFYM+A I FDGRLHLEAAKALE LEGKAL V                     D Y ++ 
Sbjct: 1264 DFYMKAVITFDGRLHLEAAKALEFLEGKALPVCLPWQKIKCQQLFHSTLSCTIDIYRVIK 1323

Query: 1323 SDSDDLESSCQ--PGVECTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIIDHAS 1382
               D L  S +   GVECTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIID AS
Sbjct: 1324 HQLDSLLESFRRIDGVECTLSQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIIDDAS 1383

Query: 1383 LTPTVLQHLTSRAGFDLINFLQRENGVYILFDRQRLSLRIFGASEKIAEAEQKLIQSLQT 1442
            LTP VLQHLTSR GFDLIN LQRENGVYILFDRQRLSLRIFGASEK+A AE+KLIQSLQ 
Sbjct: 1384 LTPAVLQHLTSRDGFDLINLLQRENGVYILFDRQRLSLRIFGASEKMAAAERKLIQSLQL 1443

Query: 1443 IHESKQLEIHLRGKSLPPNLLKAVVEKFGPDLNGLKQKFPGAGFTLNTRRHILYVQGSKD 1502
            IHESKQLEIHLRGKS PPNLLKAVVEKFGPDLN LKQKFPGAGFTLNTRRHILYVQGSKD
Sbjct: 1444 IHESKQLEIHLRGKSWPPNLLKAVVEKFGPDLNALKQKFPGAGFTLNTRRHILYVQGSKD 1503

Query: 1503 LKQEVETIIFELAKMSGGSAERPDDADACPICLCDIEDDRFELEACGHHFCRQCLVEQFE 1562
            LKQEVET+IFELA +SGGS ERPDDAD CPICLCDIEDDRFELE CGHHFCRQCLVEQFE
Sbjct: 1504 LKQEVETVIFELATISGGSGERPDDADCCPICLCDIEDDRFELEVCGHHFCRQCLVEQFE 1563

Query: 1563 SAIKNQGRFPVCCAKQKCESPILLADMRTLLSSEKLEELFRASLGAFVASSDGAYRFCPS 1622
            SAIKNQGRFP+CCAKQKC +PI+LADMRTLLSSEKLEELFRASLGAF+ASSDGAYRFCPS
Sbjct: 1564 SAIKNQGRFPICCAKQKCGTPIVLADMRTLLSSEKLEELFRASLGAFIASSDGAYRFCPS 1623

Query: 1623 PDCPSVYRVASPDMSGEPFMCGACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSLSEWR 1682
            PDCPSVYRVA PDM GEPF+CGACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSL EWR
Sbjct: 1624 PDCPSVYRVARPDMPGEPFVCGACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSLKEWR 1683

Query: 1683 KDKENVKNCPVCGYTIEKMDGCNHVECRCGRHICWVCLEYFGSSDECYIHLRSIHMTIV 1724
            K KENVKNCPVCGYTIEK +GCNHVECRCGRHICWVCLEYFGSSDECY HL S+HMTIV
Sbjct: 1684 KGKENVKNCPVCGYTIEKTEGCNHVECRCGRHICWVCLEYFGSSDECYAHLGSVHMTIV 1735

[Close]

BLAST of Lsi05G008150 vs. NCBI nr
Match: gi|590706887|ref|XP_007047849.1| (Helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 2168.7 bits (5618), Expect = 0.0e+00
Identity = 1054/1691 (62.33%), Postives = 1308/1691 (77.35%), Query Frame = 1


Query: 56   RANFVIDLVLEHRGVLKSSVEDL---IAKCNSKPDNFIVPHVGSVSAFMYFKQWVSALEA 115
            R NF I L+++      +   DL   I++ N  P+N  +   G  +A ++F++W+  L +
Sbjct: 70   RPNFTILLLVDSSSSSPAKPNDLQTLISQLNPAPENSRIHPTGKTAASLFFREWIHTLSS 129

Query: 116  MVELWELRLDGLHGFTPILKPRINLPSDFDELHDRLRNLFAERIKRLMDGEKVRHWQNKC 175
            ++ LW  RLDG H FTP L   + + SD  EL   L+ LF+  IK LM+GE V+ W+ K 
Sbjct: 130  ILSLWRSRLDGSHHFTPNLICNVRVASDMVELKQNLKTLFSNHIKGLMEGELVKKWKEKI 189

Query: 176  DLVMDEI-DRILDMLRRPLRIATVFELKEKKKGLLIEKKSIMRKVEEFNSAMRYILDYVE 235
            +   DEI D      +R       FEL +KKKGL+ E+  I ++++EF   MR +L  +E
Sbjct: 190  EEKSDEIADVAAQTGKRHCSRGRFFELNDKKKGLMAERSMISKRLKEFKGGMRSLLGCLE 249

Query: 236  GKKLESSDSHD-LGFFTFDETINWNRIHSLILRECRRLEDGLPMYSCRQEILRQIQCQQV 295
               + + +  D +  F FD  ++W RIH LILRECRRLEDGLP+Y+ RQEIL +I  +Q+
Sbjct: 250  DGVIGNVEEGDGVEVFRFDGELDWERIHRLILRECRRLEDGLPIYAHRQEILTRIHGEQI 309

Query: 296  MVLVGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISAVSLAHRVREESRGCYDDDDY 355
            MVL+GETGSGKSTQLVQFL DS ++A++SIVCTQPRKI+A+SLA RVREES GCYDD+  
Sbjct: 310  MVLIGETGSGKSTQLVQFLTDSAIAANESIVCTQPRKIAAISLAERVREESIGCYDDNSV 369

Query: 356  ISCYPSFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSCIIIDEAHERSLNTDLLLALL 415
            + CYP+FSSAQQF SK+IYMTDHCLLQHYMND+ LS +SCII+DEAHERSLNTDLLLAL+
Sbjct: 370  V-CYPTFSSAQQFDSKVIYMTDHCLLQHYMNDRNLSGISCIIVDEAHERSLNTDLLLALV 429

Query: 416  KSLLMVRIDLHLIIMSATANADQLSKYFFGCGIFHVPGRNFPVDIKYVPSSDEGTSSSGI 475
            K LL  R++L L+IMSATANA+QLS YFFGCGIFHV GR+F VDIKYVP + EGTS S +
Sbjct: 430  KDLLCRRLELRLVIMSATANANQLSDYFFGCGIFHVMGRHFSVDIKYVPCATEGTSGSSM 489

Query: 476  VASYVTDVVRMSSEIHWQEKGGTILAFLTSQMEVEWACENFHAPGTVPLAFHGKLSFDEQ 535
            VASYV+DV RM++E+H  EK GTILAFLTSQMEVEWAC+NF A   V L  HGKLSF+EQ
Sbjct: 490  VASYVSDVTRMAAEVHKTEKEGTILAFLTSQMEVEWACDNFEASNAVALPLHGKLSFEEQ 549

Query: 536  FRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKDSKFEPGSGMNILKVCRTSQS 595
            F VFQ++PGKRKV+FATN+AETSLTIPGVKYVID G VK+SKFEPG+GMN+L+VC  SQS
Sbjct: 550  FHVFQNYPGKRKVVFATNIAETSLTIPGVKYVIDSGMVKESKFEPGTGMNVLRVCWISQS 609

Query: 596  SANQRAGRAGRTEPGRCYRLYTESEFELMSPNHEPEIRKVHLGVAILRILALGVKNVDDF 655
            SANQRAGRAGRTEPGRCYRLYT + FELM PN EPEIR+VHLGVA+LRILALG+KNV  F
Sbjct: 610  SANQRAGRAGRTEPGRCYRLYTANNFELMPPNQEPEIRRVHLGVAVLRILALGIKNVQSF 669

Query: 656  DFVDAPSAEAVDMAIRNLVQLGAITLNNKVYELTNEGCNLVKLGIEPRLGKLILSCFDCR 715
            DFVDAPS++A+DMAIRNL+QLGAI   N V ELT++G  LVKLGIEPRLGKLILSCF CR
Sbjct: 670  DFVDAPSSKAIDMAIRNLIQLGAIVQKNGVLELTDDGRYLVKLGIEPRLGKLILSCFHCR 729

Query: 716  VRREGVVLAVLMTNASSIFCRVGRVEDKLKSDCQKVQFCHADGDLFTLLSVYKQYEALPK 775
            +RREG+VLA +M NASSIFCRVG   DK+K+DC KVQFCH +GDLFTLLSVYK++EALP 
Sbjct: 730  LRREGLVLAAVMANASSIFCRVGNEGDKVKADCLKVQFCHQNGDLFTLLSVYKEWEALPH 789

Query: 776  EKKNKWCWENSINAKTMRRCQDAILELERCLKQELHIIIPSYWLWSPLKPSDHDRNLKKC 835
             +KNKWCWENSINAK+MRRCQD + ELE CL++EL +IIPS+ LW P K ++HD+ LK  
Sbjct: 790  NRKNKWCWENSINAKSMRRCQDTVTELEICLQKELSVIIPSFLLWDPHKSTEHDKFLKAI 849

Query: 836  ILASLAENVAMFTGYDRLGYEVALTGQHVQLHPSCSLLIFSERPKWVVFGEILSITNEYL 895
            IL+SLAENVAM++GYD+LGYEVALTGQHVQLHPSCSLLIF ++P WVVFGE+LSITN+YL
Sbjct: 850  ILSSLAENVAMYSGYDQLGYEVALTGQHVQLHPSCSLLIFGQKPSWVVFGELLSITNQYL 909

Query: 896  VCVTAFDVDALLTLSPPPLFDISNMEQHRLEGRVLSGFGKTLLKRVCGKSNSNLLSLTSH 955
            VCVTAFD ++L TL PPPLFD S ME  +L+ + ++GFG TLLK+ CGKSN NL SL S 
Sbjct: 910  VCVTAFDFESLATLDPPPLFDASRMESRKLQVKAMTGFGSTLLKKFCGKSNHNLRSLVSR 969

Query: 956  VQKVFSDNCIGIEVNINQNEILLFSRTENMDKVCHFVNDILEYERKYLLNECMEKCLYHG 1015
            ++    D  IG+EVN++QNEILLF+ + +M KV  FVN++LE ERK+LLNECMEKCL+HG
Sbjct: 970  LRTACMDERIGVEVNVDQNEILLFASSMDMQKVLAFVNEVLECERKWLLNECMEKCLFHG 1029

Query: 1016 NGGSTPVALLGAGAKIRHLELEKRYLTVYAYRSNVDIIDDKEFFMSLEKFVSGTVCAIQK 1075
             G S  +AL GAGA+I+HLE++KR LT+  + SNV+ ++DK   M  EK+ +G++C++ K
Sbjct: 1030 QGASPSMALFGAGAEIKHLEVDKRCLTLDVFHSNVNDLEDKGLLMLFEKYSNGSICSVHK 1089

Query: 1076 VSCSGQDVDDKERGHRITFLTPDAAEKASKFDSDSFCGSLVKITPSQLTAGCDNKLFTFP 1135
               SG + DDKE+  +ITFL PDAA KA++ D   F GS +K+ PS+ + G D+K+F+FP
Sbjct: 1090 SQASGHESDDKEKWGKITFLNPDAARKAAELDGVDFAGSALKVLPSRTSFGADHKMFSFP 1149

Query: 1136 PVKAKVFWPRRLSKGFAVVKCNIYDVGFILNDFSNLQIGDRFLRSEPSIKYSDCVTISGI 1195
             VKAKV WPRR SKGF +VKC++ D+GFI++DFS+L IG + +R E S K  D + I GI
Sbjct: 1150 AVKAKVCWPRRPSKGFGIVKCDLLDIGFIIDDFSSLVIGGKNVRCEVSRKSVDAIVIYGI 1209

Query: 1196 DKELSEADILNVLRSVTDRKILDLFLVRENAVDNPPVHSCEEALLKEISPFMPKSNPHAK 1255
            DKELSEA++ + L++ T RKI D FLVR +AV+NP   +CEEAL +EISPFMPK NPHA 
Sbjct: 1210 DKELSEAEVWDELQTATKRKIHDFFLVRGDAVENPTCSACEEALHREISPFMPKRNPHAN 1269

Query: 1256 CCHVQVFPPQPKDFYMRAAINFDGRLHLEAAKALECLEGKAL----------------SV 1315
            CC VQVF P+PK+ +M+A I FDGRLHLEAAKALE LEGK L                S 
Sbjct: 1270 CCWVQVFQPEPKESFMKALITFDGRLHLEAAKALEQLEGKVLPGCLSWQKIRCQQLFHSS 1329

Query: 1316 GELDEDYYSLVWSDSDDLESSCQ--PGVECTLSQNVNGSYRVKLSANATKTVAELRRPVE 1375
                   Y+++    D L +S +   G  C L  N NGSYRV++SANATKTVAELRRPVE
Sbjct: 1330 ISCSSSVYAVIRKQLDSLLASFRHLKGAGCYLEANGNGSYRVRISANATKTVAELRRPVE 1389

Query: 1376 ELLRGKIIDHASLTPTVLQHLTSRAGFDLINFLQRENGVYILFDRQRLSLRIFGASEKIA 1435
            EL+ GK + HASLTP++LQHL SR G + +  LQ+E G YI FDR  L++RIFG+ +  A
Sbjct: 1390 ELMNGKTVKHASLTPSILQHLFSRDGINQMRSLQQETGTYIFFDRHSLNIRIFGSPDNAA 1449

Query: 1436 EAEQKLIQSLQTIHESKQLEIHLRGKSLPPNLLKAVVEKFGPDLNGLKQKFPGAGFTLNT 1495
             A+QKLIQSL   HESKQLE+ LRG+ LPP+L+K VV+KFGPDL+GLK+K PGA F L+T
Sbjct: 1450 VAQQKLIQSLLLYHESKQLEVKLRGRGLPPDLMKEVVKKFGPDLHGLKEKIPGAEFALST 1509

Query: 1496 RRHILYVQGSKDLKQEVETIIFELAKMSGGSAERPDDADACPICLCDIEDDRFELEACGH 1555
            R H++ ++G K++K++VE I+ E+ +     AER D    CPICLC++ED  ++LE C H
Sbjct: 1510 RHHVISIRGDKEMKRKVEEIVLEIVETGKHLAERSDSEVTCPICLCEVEDG-YQLEGCSH 1569

Query: 1556 HFCRQCLVEQFESAIKNQGRFPVCCAKQKCESPILLADMRTLLSSEKLEELFRASLGAFV 1615
             FCR CLVEQ ESAIKN   FP+CCA Q C++PILL D+++LLS+EKLEELFRASLGAFV
Sbjct: 1570 FFCRLCLVEQCESAIKNLDSFPICCAYQGCKAPILLTDLKSLLSTEKLEELFRASLGAFV 1629

Query: 1616 ASSDGAYRFCPSPDCPSVYRVASPDMSGEPFMCGACYSETCNRCHLEYHPFLSCEQYRVF 1675
            ASS G YRFCPSPDCPSVYRVA P+  GEPF+CGACY+ETC +CHLEYHP+LSCE+Y+ F
Sbjct: 1630 ASSRGTYRFCPSPDCPSVYRVADPETFGEPFVCGACYAETCIKCHLEYHPYLSCEKYKEF 1689

Query: 1676 KEDPDSSLSEWRKDKENVKNCPVCGYTIEKMDGCNHVECRCGRHICWVCLEYFGSSDECY 1724
            KEDPDSSL EW K KE VK CPVCGYT+EK+DGCNHVEC+CGRH+CWVCLE+F SSD+CY
Sbjct: 1690 KEDPDSSLKEWCKGKEQVKTCPVCGYTVEKIDGCNHVECKCGRHVCWVCLEFFSSSDDCY 1749

[Close]

BLAST of Lsi05G008150 vs. NCBI nr
Match: gi|568822866|ref|XP_006465847.1| (PREDICTED: ATP-dependent RNA helicase DEAH11, chloroplastic-like [Citrus sinensis])

HSP 1 Score: 2145.5 bits (5558), Expect = 0.0e+00
Identity = 1063/1711 (62.13%), Postives = 1322/1711 (77.26%), Query Frame = 1


Query: 38   PDYPAQFRKFSGQQTSPN--RANFVIDLVLEHRGVLKSSVEDLIAKCNSKPDNFIVPHVG 97
            P  P   ++ S   TSP   R NF+I L      +    ++ L++K +   ++  V   G
Sbjct: 26   PKIPPNQKRHSPSATSPPLPRPNFIIQLRSSTPAISGQELKALLSKLSLSCEDVAVSPSG 85

Query: 98   SVSAFMYFKQWVSALEAMVELWELRLDGLHGFTPILKPRINLPSDFDELHDRLRNLFAER 157
             + A +YF QWV  L AMV LWE RL+G H     L P + +PSD DEL +RLRNLF + 
Sbjct: 86   PLIASLYFNQWVDTLNAMVGLWESRLNGAHCLNLKLIPHVVVPSDADELEERLRNLFVDH 145

Query: 158  IKRLMDGEKVRHWQNKCDLVMDEIDRILDMLRRPLRIATVFELKEKKKGLLIEKKSIMRK 217
            +K LM+GE V  W    D   DEI  + + L      A   EL E+KKGL  E++ IMR+
Sbjct: 146  VKGLMEGELVNKWLKMKDDKCDEISNVSNRLGSRNSYAVFCELNERKKGLFKEREMIMRR 205

Query: 218  VEEFNSAMRYILDYVEGK----KLESSDSH-DLGFFTFDETINWNRIHSLILRECRRLED 277
            V EF +AM  +L Y++      K ES D++ D+  F   +  +W RI + I+REC+RLED
Sbjct: 206  VREFKNAMHCVLKYLDDPQNVAKKESYDANVDVFRFEDCQRFDWFRIQAFIVRECKRLED 265

Query: 278  GLPMYSCRQEILRQIQCQQVMVLVGETGSGKSTQLVQFLADSGLSASKSIVCTQPRKISA 337
            GLP+Y  RQ+ILR+I  +Q++VL+GETG GKSTQLVQFLADSG++A +SIVCTQPRKI+A
Sbjct: 266  GLPIYMYRQDILRRIYGEQILVLIGETGCGKSTQLVQFLADSGIAAEQSIVCTQPRKIAA 325

Query: 338  VSLAHRVREESRGCYDDDDYISCYPSFSSAQQFKSKIIYMTDHCLLQHYMNDKKLSDVSC 397
            +SLA RVREESRGCY+DD  I CYPSFSSAQ F SK+IYMTDHCLLQH+MND+ LS +SC
Sbjct: 326  ISLAQRVREESRGCYEDDSVI-CYPSFSSAQHFDSKVIYMTDHCLLQHFMNDRDLSRISC 385

Query: 398  IIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSKYFFGCGIFHVPGRN 457
            II+DEAHERSLNTDLLLAL+K LL  R DL L+IMSATA+A QLSKYF+ CGI HV GRN
Sbjct: 386  IIVDEAHERSLNTDLLLALVKDLLCRRFDLRLVIMSATADAHQLSKYFYDCGISHVVGRN 445

Query: 458  FPVDIKYVPSSDEGTSSSGIVASYVTDVVRMSSEIHWQEKGGTILAFLTSQMEVEWACEN 517
            FPVD++YVP +  GTS+   VASYV+DVVRM  E+H  EK GTILAFLTS+MEVEWACE 
Sbjct: 446  FPVDVRYVPCATAGTSA---VASYVSDVVRMVGEVHTTEKEGTILAFLTSKMEVEWACEK 505

Query: 518  FHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDPGWVKD 577
            F AP  V L FHG+LSFDEQF VF+ +PG+RKVIFATN+AETSLTIPGVK+VID G VK+
Sbjct: 506  FDAPSAVALPFHGQLSFDEQFCVFKSYPGRRKVIFATNVAETSLTIPGVKFVIDSGMVKE 565

Query: 578  SKFEPGSGMNILKVCRTSQSSANQRAGRAGRTEPGRCYRLYTESEFELMSPNHEPEIRKV 637
            S FEPG+GMN+L+VCR SQSSANQRAGRAGRTEPGRCYRLY++S+FE    N EPEI +V
Sbjct: 566  SYFEPGTGMNVLRVCRVSQSSANQRAGRAGRTEPGRCYRLYSKSDFETRPLNQEPEIHRV 625

Query: 638  HLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLNNKVYELTNEGCNL 697
            HLG+A+LRILALG+++V  FDF+DAPSA+A++MAIRNLVQLGAI LNN V+ELT EG  L
Sbjct: 626  HLGIAVLRILALGIRDVQGFDFIDAPSAKAIEMAIRNLVQLGAIKLNNGVFELTEEGKFL 685

Query: 698  VKLGIEPRLGKLILSCFDCRVRREGVVLAVLMTNASSIFCRVGRVEDKLKSDCQKVQFCH 757
            VKLGIEPRLGKLILSCF  R+ REG+VLA +M NASSIFCRVG  ++K+K+DC KVQFCH
Sbjct: 686  VKLGIEPRLGKLILSCFRRRLGREGLVLAAVMANASSIFCRVGSDDEKIKADCLKVQFCH 745

Query: 758  ADGDLFTLLSVYKQYEALPKEKKNKWCWENSINAKTMRRCQDAILELERCLKQELHIIIP 817
             +GDLFTLLSVY+++++LP+E++NKWCWENS+NAK++RRCQD I ELE CL++EL IIIP
Sbjct: 746  RNGDLFTLLSVYREWDSLPREERNKWCWENSVNAKSLRRCQDTIKELETCLEKELAIIIP 805

Query: 818  SYWLWSPLKPSDHDRNLKKCILASLAENVAMFTGYDRLGYEVALTGQHVQLHPSCSLLIF 877
            SYWLW+P K +++D+ LK+ IL++LAENVAMF+GYD+LGYEVA+TGQHVQLHPSCSLLIF
Sbjct: 806  SYWLWNPHKYTEYDKWLKEIILSALAENVAMFSGYDQLGYEVAMTGQHVQLHPSCSLLIF 865

Query: 878  SERPKWVVFGEILSITNEYLVCVTAFDVDALLTLSPPPLFDISNMEQHRLEGRVLSGFGK 937
             ++P WVVFGE+LS+ N+YLVCVTAFD D+L TL P PLFD+S ME+ +L  RV++GFG 
Sbjct: 866  GQKPTWVVFGELLSVNNQYLVCVTAFDFDSLSTLCPSPLFDVSMMERKKLHVRVITGFGS 925

Query: 938  TLLKRVCGKSNSNLLSLTSHVQKVFSDNCIGIEVNINQNEILLFSRTENMDKVCHFVNDI 997
             LLK+ CGKSNSN+LSL S ++  F D  IGIEVN++QN+ILLF+ +++++KV   V+D+
Sbjct: 926  ILLKKFCGKSNSNVLSLVSRLRSTFMDERIGIEVNVDQNQILLFASSQDIEKVLGLVSDV 985

Query: 998  LEYERKYLLNECMEKCLYHGNGGSTPVALLGAGAKIRHLELEKRYLTVYAYRSNVDIIDD 1057
            LEYE+K+L NEC+EKCLY G G S  VAL GAGA+I+HLELE+R+LTV  Y SN +I+DD
Sbjct: 986  LEYEKKWLHNECIEKCLYQGAGVSPSVALFGAGAEIKHLELERRFLTVDVYHSNANILDD 1045

Query: 1058 KEFFMSLEKFVSGTVCAIQKVSCSGQDVDDKERGHRITFLTPDAAEKASKFDSDSFCGSL 1117
            KE  M LEK  SG++C+I K +  GQD D+K++  R+TFLTPD A KA++ +   + GSL
Sbjct: 1046 KELLMFLEKNASGSICSIHKFAV-GQDSDEKDKWGRVTFLTPDTAGKATELNGVEYNGSL 1105

Query: 1118 VKITPSQLTAGCDNKLFTFPPVKAKVFWPRRLSKGFAVVKCNIYDVGFILNDFSNLQIGD 1177
            +K+ PS+ T G DNK++TFP VKAKV+WPRRLSKGFAVVKC+  DV F++ DF +L IG 
Sbjct: 1106 LKVVPSRATLGGDNKMYTFPAVKAKVYWPRRLSKGFAVVKCDATDVEFLVKDFFDLAIGG 1165

Query: 1178 RFLRSEPSIKYSDCVTISGIDKELSEADILNVLRSVTDRKILDLFLVRENAVDNPPVHSC 1237
            R++R E   +  D V ISG+DKELSE +IL  LR VT R+I DLFLVR +AV+ P   + 
Sbjct: 1166 RYVRCEIGRRSMDSVVISGLDKELSEDEILGELRKVTTRRIRDLFLVRGDAVECPQFDAF 1225

Query: 1238 EEALLKEISPFMPKSNPHAKCCHVQVFPPQPKDFYMRAAINFDGRLHLEAAKALECLEGK 1297
            EEALL+EIS FMPK N HA CC VQVFPP+PKD +M+A I FDGRLHLEAAKALE LEGK
Sbjct: 1226 EEALLREISRFMPKRNSHANCCRVQVFPPEPKDAFMKAFITFDGRLHLEAAKALEQLEGK 1285

Query: 1298 AL----------------SVGELDEDYYSLVWSDSDDLESSCQ--PGVECTLSQNVNGSY 1357
             L                S        YS++  + + L ++     G EC + +N NGSY
Sbjct: 1286 VLPGCGPWQKMKCQQLFHSSLSCPASVYSVIKEELNSLLATLNRVNGAECVVERNYNGSY 1345

Query: 1358 RVKLSANATKTVAELRRPVEELLRGKIIDHASLTPTVLQHLTSRAGFDLINFLQRENGVY 1417
            RV++S+NATKTVA+LRRPVE L+RG+ ++HASLTPT+LQHL +R G +L   LQ+E   +
Sbjct: 1346 RVRISSNATKTVADLRRPVEVLMRGRTVNHASLTPTILQHLFTRDGINLRKSLQQETRTF 1405

Query: 1418 ILFDRQRLSLRIFGASEKIAEAEQKLIQSLQTIHESKQLEIHLRGKSLPPNLLKAVVEKF 1477
            ILFDR  LS++IFGA + IAEA+QKLIQSL T HESKQLEIHLRG  LPP+L+K VV +F
Sbjct: 1406 ILFDRHTLSVKIFGAPDNIAEAQQKLIQSLLTYHESKQLEIHLRGGVLPPDLMKEVVRRF 1465

Query: 1478 GPDLNGLKQKFPGAGFTLNTRRHILYVQGSKDLKQEVETIIFELAKMSGGSAERPDDADA 1537
            GPDL GLK+K PGA F+LNTRRH++ V G ++LKQ+VE II+E+A+ S GSAER     +
Sbjct: 1466 GPDLQGLKEKVPGAEFSLNTRRHVISVHGDRELKQKVEEIIYEIAQTSDGSAERLHSEAS 1525

Query: 1538 CPICLCDIEDDRFELEACGHHFCRQCLVEQFESAIKNQGRFPVCCAKQKCESPILLADMR 1597
            CPICLC++E+  + LE C H FCR CLVEQ ESAIKN   FP+ CA   C++ ILL D+R
Sbjct: 1526 CPICLCELEES-YRLEGCTHLFCRSCLVEQCESAIKNMDSFPIRCAHSGCKALILLTDLR 1585

Query: 1598 TLLSSEKLEELFRASLGAFVASSDGAYRFCPSPDCPSVYRVASPDMSGEPFMCGACYSET 1657
            +LLS+EKLEELFRASLGA+VASS G YRFCPSPDCPSVYRVA P  +GEPF CGACY+ET
Sbjct: 1586 SLLSNEKLEELFRASLGAYVASSGGTYRFCPSPDCPSVYRVAEPGTAGEPFFCGACYAET 1645

Query: 1658 CNRCHLEYHPFLSCEQYRVFKEDPDSSLSEWRKDKENVKNCPVCGYTIEKMDGCNHVECR 1717
            C  CHLE+HP+LSCE+YR FKEDPDSSL EW K KE+VK CP+CGYTIEK++GCNH+ECR
Sbjct: 1646 CTMCHLEHHPYLSCEKYREFKEDPDSSLKEWCKGKEHVKTCPICGYTIEKIEGCNHIECR 1705

Query: 1718 CGRHICWVCLEYFGSSDECYIHLRSIHMTIV 1724
            CGRHICWVCL+ F S+++CY HLRS HM+ +
Sbjct: 1706 CGRHICWVCLDIFNSANDCYGHLRSKHMSFI 1730

[Close]

BLAST of Lsi05G008150 vs. NCBI nr
Match: gi|1009146166|ref|XP_015890734.1| (PREDICTED: ATP-dependent RNA helicase DEAH11, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 2140.9 bits (5546), Expect = 0.0e+00
Identity = 1068/1719 (62.13%), Postives = 1314/1719 (76.44%), Query Frame = 1


Query: 32   NTGPSTPDYPAQFRKFSGQQTSP-NRANFVIDLVLEHRGVLKSSVEDLIAKCNSKPDNFI 91
            N   STP+ P          +SP  R NFV++LV+EHR   +  V  L+ +C SKP++F 
Sbjct: 34   NPKNSTPNLPPNHHLGPAALSSPFERPNFVVNLVVEHRDARRPDVNALLRQCKSKPESFR 93

Query: 92   VPHVGSVSAFMYFKQWVSALEAMVELWELRLDGLHGFTPILKPRINLPSDFDELHDRLRN 151
            + H G     +YF+QWV AL A+V  WE RLDG H   P L P + +PSD DEL DRLR 
Sbjct: 94   LSHSGMAVGTLYFRQWVDALAAVVWFWESRLDGAHSLIPKLSPLVIVPSDQDELRDRLRE 153

Query: 152  LFAERIKRLMDGEKVRHWQNKCDLVMDEIDRILDMLRRPLRIATVFELKEKKKGLLIEKK 211
            LF+ RI+RLM+GE V  W  K   + +EI R+  +L+ P R+    EL E++K L  EK 
Sbjct: 154  LFSNRIRRLMEGEAVEKWNKKSVNLSNEIRRVWALLKNPNRLNVYAELSEREKRLGAEKD 213

Query: 212  SIMRKVEEFNSAMRYILDYVEGKKLESS-----DSHDLGFFTFDETINWNRIHSLILREC 271
             + ++++EF SAM  +L ++EGK+  +      + +++  F  +   +W RIHSL+LREC
Sbjct: 214  LVEKRLKEFKSAMNSLLVHLEGKRTTTEVVVDGEGNNVKLFNLEGDYDWRRIHSLMLREC 273

Query: 272  RRLEDGLPMYSCRQEILRQIQCQQVMVLVGETGSGKSTQLVQFLADSGLSASKSIVCTQP 331
            RRLEDGLP+Y+ RQ+ILRQI CQQ+MVL+GETGSGKSTQLVQFLADSG+ A  SIVCTQP
Sbjct: 274  RRLEDGLPIYAYRQDILRQIHCQQIMVLIGETGSGKSTQLVQFLADSGIGAEGSIVCTQP 333

Query: 332  RKISAVSLAHRVREESRGCYDDDDYISCYPSFSSAQQFKSKIIYMTDHCLLQHYMNDKKL 391
            RK++A S+A RV EES GCY D+  I+C+P+FSSAQQF SK+IYMTDHCLLQHYM DK L
Sbjct: 334  RKVAATSVARRVGEESSGCYGDNS-ITCFPAFSSAQQFDSKVIYMTDHCLLQHYMTDKNL 393

Query: 392  SDVSCIIIDEAHERSLNTDLLLALLKSLLMVRIDLHLIIMSATANADQLSKYFFGCGIFH 451
            S +SCII+DEAHERSLNTDLLLALLKSLL  R  L LIIMSATA+A QLS YFFGCG+FH
Sbjct: 394  SKISCIIVDEAHERSLNTDLLLALLKSLLCQRFGLRLIIMSATADARQLSDYFFGCGVFH 453

Query: 452  VPGRNFPVDIKYVPSSDEGTSSSGIVASYVTDVVRMSSEIHWQEKGGTILAFLTSQMEVE 511
            V GRNFPVD++YVP + EGT   G+V +Y+ DVVRM+ EIH  E  G+ILAFLTSQMEVE
Sbjct: 454  VVGRNFPVDVRYVPCNAEGTY--GLVPTYLYDVVRMAKEIHKTEDEGSILAFLTSQMEVE 513

Query: 512  WACENFHAPGTVPLAFHGKLSFDEQFRVFQDHPGKRKVIFATNLAETSLTIPGVKYVIDP 571
            WACENF AP  + L FHGKLSFDEQ  +F + PGKRKVIFATNLAETSLTIPGVKYVID 
Sbjct: 514  WACENFEAPAAIALPFHGKLSFDEQNDIFHNVPGKRKVIFATNLAETSLTIPGVKYVIDS 573

Query: 572  GWVKDSKFEPGSGMNILKVCRTSQSSANQRAGRAGRTEPGRCYRLYTESEFELMSPNHEP 631
            G VK+SKFEPGSGMN+L+VC  SQSSANQRAGRAGRTEPGRCYRLY++ +FE+M+P+ EP
Sbjct: 574  GMVKESKFEPGSGMNVLRVCWISQSSANQRAGRAGRTEPGRCYRLYSQLDFEVMAPSQEP 633

Query: 632  EIRKVHLGVAILRILALGVKNVDDFDFVDAPSAEAVDMAIRNLVQLGAITLNNKVYELTN 691
            EIR+VHLGVA+LRIL+LG+KN+ DFDFVDAPS EA+DMAIRNLVQLGA+ LNN  +ELT 
Sbjct: 634  EIRRVHLGVAVLRILSLGIKNIKDFDFVDAPSTEAIDMAIRNLVQLGAVKLNNGNFELTE 693

Query: 692  EGCNLVKLGIEPRLGKLILSCFDCRVRREGVVLAVLMTNASSIFCRVGRVEDKLKSDCQK 751
            EG  LVK+G+EPRLGKLILSCF+ R+ REG+VLA LM NASSIFCRVG  E+KLKSD  K
Sbjct: 694  EGRYLVKMGVEPRLGKLILSCFNYRLGREGIVLAALMANASSIFCRVGTDEEKLKSDGLK 753

Query: 752  VQFCHADGDLFTLLSVYKQYEALPKEKKNKWCWENSINAKTMRRCQDAILELERCLKQEL 811
            VQFCH +GDLFTLLSVYKQ+E +P+  +N WCW+NSINAK+MRRC+D ++ELE CL+ EL
Sbjct: 754  VQFCHHNGDLFTLLSVYKQWEGVPRRDRNNWCWQNSINAKSMRRCEDTVMELESCLQFEL 813

Query: 812  HIIIPSYWLWSPLKPSDHDRNLKKCILASLAENVAMFTGYDRLGYEVALTGQHVQLHPSC 871
            ++IIPSYWLW+P K +D D  LK  IL+SLAENVAM++GYD+LGYEVA+TGQHVQLHPSC
Sbjct: 814  NVIIPSYWLWTPHKSTDFDGYLKNVILSSLAENVAMYSGYDQLGYEVAVTGQHVQLHPSC 873

Query: 872  SLLIFSERPKWVVFGEILSITNEYLVCVTAFDVDALLTLSPPPLFDISNMEQHRLEGRVL 931
            SLLIF+++P WVVF E+LSI+N+YLVCVTAFD D L TL PPPLFD S ME  +L+ +VL
Sbjct: 874  SLLIFNQKPSWVVFSELLSISNQYLVCVTAFDFDFLSTLDPPPLFDASKMENRKLQVKVL 933

Query: 932  SGFGKTLLKRVCGKSNSNLLSLTSHVQKVFSDNCIGIEVNINQNEILLFSRTENMDKVCH 991
            +GFG TLLKR CGK NSNL+ L S ++    D  IGIEVN++QNEI LF+ +++++ V  
Sbjct: 934  TGFGGTLLKRFCGKGNSNLVCLLSKIRADCMDERIGIEVNVDQNEITLFATSQHIESVLK 993

Query: 992  FVNDILEYERKYLLNECMEKCLYHGNGGSTPVALLGAGAKIRHLELEKRYLTVYAYRSNV 1051
            FVND LE ERK++ NEC+EKCLYHG+ G   VAL GAGA+I+HLEL+KR LTV  Y  NV
Sbjct: 994  FVNDALECERKWMHNECLEKCLYHGS-GIPSVALFGAGAEIKHLELQKRCLTVDIYYENV 1053

Query: 1052 DIID---DKEFFMSLEKFVSGTVCAIQKVSCSGQDVDDKERGHRITFLTPDAAEKASKFD 1111
              +D   +KE  MSLEKF SG++C+I K +  GQ+ DD+E+  RITFL+PDA +KA +  
Sbjct: 1054 KALDAAAEKELLMSLEKFSSGSICSIHKFTGVGQESDDREKWGRITFLSPDAVQKAGELS 1113

Query: 1112 SDSFCGSLVKITPSQLTAGCDNKLFTFPPVKAKVFWPRRLSKGFAVVKCNIYDVGFILND 1171
               F G  +KI PSQ T G DNK   FP V+AKV W RR SKGFA+VKC+++DVG ++ND
Sbjct: 1114 QVEFNGFSLKIIPSQATIG-DNK---FPNVRAKVSWARRPSKGFAIVKCDMHDVGLMVND 1173

Query: 1172 FSNLQIGDRFLRSEPSIKYSDCVTISGIDKELSEADILNVLRSVTDRKILDLFLVRENAV 1231
            FSNL IG + +R E S +  D V I+G DK+L + +IL VLR+ T R+ILD FLVR +AV
Sbjct: 1174 FSNLAIGGKRIRCEASKRCMDSVVITGFDKDLCDYEILAVLRNATRRRILDFFLVRGDAV 1233

Query: 1232 DNPPVHSCEEALLKEISPFMPKSNPHAKCCHVQVFPPQPKDFYMRAAINFDGRLHLEAAK 1291
            +NP  H   EAL KEIS FMPK NPH K   V+V  P+PKD +MRA I FDGRLHLEAAK
Sbjct: 1234 ENPS-HGICEALEKEISAFMPKGNPHNKPVQVKVLGPEPKDAFMRALIFFDGRLHLEAAK 1293

Query: 1292 ALECLEGKAL----------------SVGELDEDYYSLVWSDSDDLESSC--QPGVECTL 1351
            ALE +EGK L                +        YS++  + D L  S     GVEC L
Sbjct: 1294 ALEQIEGKVLPGCFPWQKIKCQQLFHTSLSCSVPVYSVIEKELDSLLKSFTHMKGVECCL 1353

Query: 1352 SQNVNGSYRVKLSANATKTVAELRRPVEELLRGKIIDHASLTPTVLQHLTSRAGFDLINF 1411
             +N NGSYRVK+SANAT+TVAELRR  EEL+ GK ID ++LTP VLQ+L SR G +LI  
Sbjct: 1354 DRNANGSYRVKISANATRTVAELRRRGEELINGKTIDDSNLTPAVLQNLFSRDGINLIRS 1413

Query: 1412 LQRENGVYILFDRQRLSLRIFGASEKIAEAEQKLIQSLQTIHESKQLEIHLRGKSLPPNL 1471
            LQRE G YI FDR  L++R+FG+ +K++ A+QK I SL  +HE K+LEIHLR + LPP+L
Sbjct: 1414 LQRETGTYIFFDRHSLNVRVFGSPDKVSVAQQKFIHSLLALHEGKKLEIHLRSRDLPPDL 1473

Query: 1472 LKAVVEKFGPDLNGLKQKFPGAGFTLNTRRHILYVQGSKDLKQEVETIIFELAKMSGGSA 1531
            +KAVV+KFGPDL+GLK+K PGA F+LN RRH++++ G  +LKQ+VE II+++AKMS  S 
Sbjct: 1474 MKAVVKKFGPDLHGLKEKVPGADFSLNARRHVVFIHGDIELKQKVEEIIYDIAKMSDSST 1533

Query: 1532 ERPDDADACPICLCDIEDDRFELEACGHHFCRQCLVEQFESAIKNQGRFPVCCAKQKCES 1591
            ER ++   CPICLCDIED+ + LE C H FCR CL+EQ ESAI+N+  FP+CCA + C S
Sbjct: 1534 ERSNNEVTCPICLCDIEDE-YRLEDCQHVFCRSCLMEQCESAIRNKDSFPLCCAHKGCGS 1593

Query: 1592 PILLADMRTLLSSEKLEELFRASLGAFVASSDGAYRFCPSPDCPSVYRVASPDMSGEPFM 1651
            P+LL D++ LLSSEKL++LFRASLGAFVASS G YRFCP+PDCP+VYRVA P  +GEPF+
Sbjct: 1594 PLLLTDLKCLLSSEKLDDLFRASLGAFVASSGGTYRFCPTPDCPAVYRVADPGTAGEPFV 1653

Query: 1652 CGACYSETCNRCHLEYHPFLSCEQYRVFKEDPDSSLSEWRKDKENVKNCPVCGYTIEKMD 1711
            CGAC +ETC  CHLEYH   SCE Y+ FKEDPDSSL EWRK KE+VK CPVCG TIEK++
Sbjct: 1654 CGACSAETCTSCHLEYHLSWSCETYKEFKEDPDSSLKEWRKGKEHVKTCPVCGDTIEKVE 1713

Query: 1712 GCNHVECRCGRHICWVCLEYFGSSDECYIHLRSIHMTIV 1724
            GCNH+EC+CGRHICWVCLE F +SD+CY HLR+IHMTI+
Sbjct: 1714 GCNHIECKCGRHICWVCLEVFRTSDDCYGHLRNIHMTII 1742

The following BLAST results are available for this feature:

BLAST of Lsi05G008150 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DEAHC_ARATH	0.0e+00	54.62	ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana GN=At5g...	[more]
DEAHB_ARATH	0.0e+00	53.34	ATP-dependent RNA helicase DEAH11, chloroplastic OS=Arabidopsis thaliana GN=At4g...	[more]
DEAH5_ARATH	1.6e-111	34.23	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsi...	[more]
MOG1_CAEEL	6.3e-100	31.79	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 OS=Caenorhabd...	[more]
DHX16_PIG	4.2e-96	34.72	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Sus scrofa...	[more]

BLAST of Lsi05G008150 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVR7_CUCSA	0.0e+00	87.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097700 PE=4 SV=1	[more]
A0A061DJ84_THECC	0.0e+00	62.33	Helicase domain-containing protein / IBR domain-containing protein / zinc finger...	[more]
V4RXD4_9ROSI	0.0e+00	62.07	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024688mg PE=4 SV=1	[more]
A0A0D2T6A7_GOSRA	0.0e+00	60.90	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G111000 PE=4 SV=1	[more]
A0A0B0NMS9_GOSAR	0.0e+00	59.33	Uncharacterized protein OS=Gossypium arboreum GN=F383_07330 PE=4 SV=1	[more]

BLAST of Lsi05G008150 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G10370.1	0.0e+00	54.62	helicase domain-containing protein / IBR domain-containing protein /...	[more]
AT4G01020.1	0.0e+00	53.34	helicase domain-containing protein / IBR domain-containing protein /...	[more]
AT3G26560.1	9.0e-113	34.23	ATP-dependent RNA helicase, putative	[more]
AT5G13010.1	9.6e-99	35.67	RNA helicase family protein	[more]
AT1G32490.1	1.2e-96	34.35	RNA helicase family protein	[more]

BLAST of Lsi05G008150 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659111185\|ref\|XP_008455623.1\|	0.0e+00	88.57	PREDICTED: putative uncharacterized protein At4g01020, chloroplastic [Cucumis me...	[more]
gi\|449439023\|ref\|XP_004137287.1\|	0.0e+00	87.87	PREDICTED: putative uncharacterized protein At4g01020, chloroplastic [Cucumis sa...	[more]
gi\|590706887\|ref\|XP_007047849.1\|	0.0e+00	62.33	Helicase domain-containing protein / IBR domain-containing protein / zinc finger...	[more]
gi\|568822866\|ref\|XP_006465847.1\|	0.0e+00	62.13	PREDICTED: ATP-dependent RNA helicase DEAH11, chloroplastic-like [Citrus sinensi...	[more]
gi\|1009146166\|ref\|XP_015890734.1\|	0.0e+00	62.13	PREDICTED: ATP-dependent RNA helicase DEAH11, chloroplastic-like [Ziziphus jujub...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004386	helicase activity
GO:0046872	metal ion binding
GO:0008026	ATP-dependent helicase activity
GO:0005524	ATP binding
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR017907	Znf_RING_CS
IPR014001	Helicase_ATP-bd
IPR013083	Znf_RING/FYVE/PHD
IPR011709	DUF1605
IPR011545	DEAD/DEAH_box_helicase_dom
IPR007502	Helicase-assoc_dom
IPR007087	Zinc finger, C2H2
IPR002867	IBR_dom
IPR002464	DNA/RNA_helicase_DEAH_CS
IPR001841	Znf_RING
IPR001650	Helicase_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0006396	RNA processing
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004004	ATP-dependent RNA helicase activity
molecular_function	GO:0044822	poly(A) RNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G008150.1	Lsi05G008150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 484..602 score: 1.5
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 505..603 score: 1.0
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 477..648 score: 14
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 1513..1556 score: 9
IPR002464	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site	PROSITE	PS00690	DEAH_ATP_HELICASE	coord: 389..398 scor
IPR002867	IBR domain	PFAM	PF01485	IBR	coord: 1663..1703 score: 1.6E-5coord: 1590..1646 score: 1.
IPR002867	IBR domain	SMART	SM00647	ibrneu5	coord: 1657..1711 score: 0.27coord: 1582..1646 score: 8.
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 1698..1719 scor
IPR007502	Helicase-associated domain	PFAM	PF04408	HA2	coord: 664..758 score: 3.
IPR007502	Helicase-associated domain	SMART	SM00847	ha2_5	coord: 663..759 score: 3.
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 279..434 score: 8.
IPR011709	Domain of unknown function DUF1605	PFAM	PF07717	OB_NTP_bind	coord: 815..906 score: 5.2
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 1505..1558 score: 3.
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 270..456 score: 1.7
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROFILE	PS51192	HELICASE_ATP_BIND_1	coord: 282..447 score: 17
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 1530..1539 scor
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 272..430 score: 6.3E-37coord: 484..619 score: 1.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 272..781 score: 2.44
None	No IPR available	unknown	Coil	Coil	coord: 1397..1417 scor
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 103..1040 score:
None	No IPR available	PANTHER	PTHR18934:SF140	HELICASE , IBR AND ZINC FINGER PROTEIN DOMAIN-CONTAINING PROTEIN	coord: 103..1040 score:
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 1596..1650 score: 8.83E-5coord: 1666..1712 score: 3.18E-11coord: 1511..1589 score: 2.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G008150	CmaCh04G008420	Cucurbita maxima (Rimu)	cmalsiB692
Lsi05G008150	CmoCh04G009020	Cucurbita moschata (Rifu)	cmolsiB685
Lsi05G008150	Cla003095	Watermelon (97103) v1	lsiwmB381
Lsi05G008150	ClCG10G008390	Watermelon (Charleston Gray)	lsiwcgB318
Lsi05G008150	Cla97C10G191850	Watermelon (97103) v2	lsiwmbB322
Lsi05G008150	Bhi11G000716	Wax gourd	lsiwgoB412
Lsi05G008150	Cp4.1LG01g08990	Cucurbita pepo (Zucchini)	cpelsiB370
Lsi05G008150	Carg14243	Silver-seed gourd	carlsiB857

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G008150	Cucumber (Gy14) v1	cgylsiB421
Lsi05G008150	Cucurbita maxima (Rimu)	cmalsiB315
Lsi05G008150	Cucurbita moschata (Rifu)	cmolsiB305
Lsi05G008150	Cucurbita pepo (Zucchini)	cpelsiB176
Lsi05G008150	Wild cucumber (PI 183967)	cpilsiB197
Lsi05G008150	Cucumber (Chinese Long) v2	culsiB198
Lsi05G008150	Cucumber (Gy14) v2	cgyblsiB183
Lsi05G008150	Melon (DHL92) v3.6.1	lsimedB390
Lsi05G008150	Silver-seed gourd	carlsiB934