Lsi05G006790 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G006790
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Protein PLANT CADMIUM RESISTANCE 8
Location	chr05 : 9026455 .. 9028252 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGTCATGACAGCATTTCTACCATGTGTGACATTTGGACAGATTGCAGAAGTGATGGATCAAGGAGAATTGAGTAAAGCCTCTTCAATTCCCTCTGTTTTTATAATATGATTATCATTTCTGTTAAAAGTTCAAGTCAAGATCTTAGATCTTGCTGCCTTTACTTATAATATTAAACTCTCAATGATGATATATATATTATATATGTGATATTTCATTGCAGCCTGTCCTTTGGGAAGTCTTATATATGCTCTGATGATGCCTGCTTTATGCTCTCAATGGCTTATGGGCTCAAAATACAGAACAAGACTGAGAGAGAGATATAATTTGGTAGAAGCTCCATATACTGATATCATTTCTCATGTGTTCTGCCCATGTTGTTCACTTTGCCAAGAGTTCAGAGAACTTAGAAAGAGAGGACTTGACCCAGCTTTAGGTACTTCTAAATTATAATTCTTTCTTCTTTTCCATTTATTAACTGAAGAACTCATTGAGAAACTTTGTCAAGCATTAACTCTCACTGTTTTCTCTCTGTTAAACATGTGTGTTTGTTATTGGACTAGATGTTTAAAAATCAAATGGGGACTCATTTATTTGTTAAATGAAAATTGAGGTCTACCATGGTATGCATAATCAATCACATCTTGGGAAAATGAGCGGGGTGGGGGCCTGTAATTTTGCTGAAGTCTTGACAATGACTTTATATAGTTCTTAATCACTGTAATTTGTGAATGAGTCTTGCAAATCACTTCTATCGACTACCAAGTAGCTTTGTTTAATAGCTTGGAAGTGATTTTGAAATGATTAAAACTGTTTTTGTCAGGTCTAAAGTCACTCTCGAACATGTATTTGATTATTAAAAATCAAATTGTGATGTATGAAAATGTATTTAAAAGTGTAAAACCAAATATTAAATTGATTTTGAATATTGAAGACATGTTTGAGAGTAATTTTACAATATGACAAAATTGATTTAACCACTTCAAAATGACTCTCGGATATACTCCAACTATTTGATCTAAAGTCTACCATGATATGCATAACCAATCACATCTTGGGAAAATGAGTGGGGTGGGGGCCTGTAATTTTGCTGAAGTCTTGACAATGACTTTATATAGTTCTTAATCACTGTAATTTGTGAATGAGTCTTGCAAATCACTTCTACCGACTACCGACTACCAAGTAGCTTTACTTATTAGCTTGGAAGTGATTTTGAAATGATTAAAACTGTTTTTTTCAGGTCCAAAGTCACTCTCGAACATGTATTTGATTATTAAAAATTAAATTGTGATGTATGGAAACGTGTTTAAAAGTGTAAAACCAAACATTAAATTGATTTTGAATATTGAAGGCATGTTTGAGAGTAATTTTCAACAGGACAAAATTGATTTAACCACTTCAAAATGACTCTCAGATATACTCCAACTATTTGACTTGTGTCATGTCTTGCATGTGTAGTTTTAAAAGAAGTGTGCCTGGATTATCTTAAAACTATGCTTTGGGCGTACAATCTTACTCGAACCAGATTTGTTTTATAGGTTGTACCACCATCAAACAAAAATTATGCATTAGGCTTTACACTATCTTAAAAATACATTTTTTTTTTACTGTTTGACTTTTTTTTTTTTTTTTTTTGAGTGTCTATTTTCAGTTTGAGATTTTTTCCTCAGTTTGCCAAGTTAATTAATTAATATTGTTTATCCAACATGTTGTGTTTAGGATGGAATGGAATTTTAGCACAAAGACAAGCAACACAACATGAAACAGTGGAAGTTCCTCCTCCAAGACAAACCATGTTT

mRNA sequence

CGGTCATGACAGCATTTCTACCATGTGTGACATTTGGACAGATTGCAGAAGTGATGGATCAAGGAGAATTGACCTGTCCTTTGGGAAGTCTTATATATGCTCTGATGATGCCTGCTTTATGCTCTCAATGGCTTATGGGCTCAAAATACAGAACAAGACTGAGAGAGAGATATAATTTGGTAGAAGCTCCATATACTGATATCATTTCTCATGTGTTCTGCCCATGTTGTTCACTTTGCCAAGAGTTCAGAGAACTTAGAAAGAGAGGACTTGACCCAGCTTTAGGATGGAATGGAATTTTAGCACAAAGACAAGCAACACAACATGAAACAGTGGAAGTTCCTCCTCCAAGACAAACCATGTTT

Coding sequence (CDS)

ATGACAGCATTTCTACCATGTGTGACATTTGGACAGATTGCAGAAGTGATGGATCAAGGAGAATTGACCTGTCCTTTGGGAAGTCTTATATATGCTCTGATGATGCCTGCTTTATGCTCTCAATGGCTTATGGGCTCAAAATACAGAACAAGACTGAGAGAGAGATATAATTTGGTAGAAGCTCCATATACTGATATCATTTCTCATGTGTTCTGCCCATGTTGTTCACTTTGCCAAGAGTTCAGAGAACTTAGAAAGAGAGGACTTGACCCAGCTTTAGGATGGAATGGAATTTTAGCACAAAGACAAGCAACACAACATGAAACAGTGGAAGTTCCTCCTCCAAGACAAACCATGTTT

Protein sequence

MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQHETVEVPPPRQTMF

Homology

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BLAST of Lsi05G006790 vs. Swiss-Prot
Match: PCR8_ARATH (Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis thaliana GN=PCR8 PE=1 SV=2)

HSP 1 Score: 179.9 bits (455), Expect = 1.7e-44
Identity = 79/120 (65.83%), Postives = 95/120 (79.17%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           +T  +PCVTFGQIAEVMD+GE+TCPLG+ +Y LMMPALCS W+MGSKYR ++R ++NLVE
Sbjct: 69  LTTIVPCVTFGQIAEVMDEGEMTCPLGTFMYLLMMPALCSHWVMGSKYREKMRRKFNLVE 128

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQAT-QHETVEVPPPRQTM 120
           APY+D  SHV CPCCSLCQE+REL+ R LDP+LGWNGILAQ Q   + E     P  Q M
Sbjct: 129 APYSDCASHVLCPCCSLCQEYRELKIRNLDPSLGWNGILAQGQGQYEREAPSFAPTNQYM 188

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BLAST of Lsi05G006790 vs. Swiss-Prot
Match: PCR6_ARATH (Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana GN=PCR6 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.3e-24
Identity = 50/119 (42.02%), Postives = 74/119 (62.18%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           +T   P VTFGQIAEV+D+G  +C    ++Y L+        +    +RT+LR +Y L +
Sbjct: 104 ITCCFPFVTFGQIAEVIDEGATSCGTAGMLYGLICCLFAIPCVYTCTFRTKLRSKYGLPD 163

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQHETVEVPPPRQTM 120
           AP  D I+H FC  C+LCQE+REL+ RGLDP++GW G + +++  Q + +  PP  Q M
Sbjct: 164 APAPDWITHCFCEYCALCQEYRELKNRGLDPSIGWIGNVQKQRMGQQQEMMAPPMGQRM 222

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BLAST of Lsi05G006790 vs. Swiss-Prot
Match: PCR7_ARATH (Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana GN=PCR7 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 9.6e-24
Identity = 49/119 (41.18%), Postives = 72/119 (60.50%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           +T F PCVTFG+IA++ D+G   C    + Y L+   +    L    YRT++R ++ L E
Sbjct: 21  LTCFCPCVTFGRIADISDEGRTGCGRCGVFYGLICCVVGLPCLFSCTYRTKIRSKFGLPE 80

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQHETVEVPPPRQTM 120
           +P +D ++H FC CC+LCQE REL+ RGLDP++GW+G + +  A        PP  Q M
Sbjct: 81  SPTSDCVTHFFCECCALCQEHRELKTRGLDPSIGWSGNMQRTMA--------PPMSQQM 131

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BLAST of Lsi05G006790 vs. Swiss-Prot
Match: PCR4_ARATH (Protein PLANT CADMIUM RESISTANCE 4 OS=Arabidopsis thaliana GN=PCR4 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.4e-21
Identity = 48/119 (40.34%), Postives = 71/119 (59.66%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           +T   PCVT GQIAE++D+G   C  G L+Y ++   +   ++    +R ++R +Y L +
Sbjct: 70  ITCLAPCVTLGQIAEIVDEGATPCATGGLLYGMIF-FIGVPFVYSCMFRAKMRNKYGLPD 129

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQHETVEVPPPRQTM 120
           AP  D I+H+FC  C+LCQE+REL+ RG DP +GW G +  +Q      V  PP  Q M
Sbjct: 130 APAPDWITHLFCEHCALCQEYRELKHRGFDPNIGWAGNVQAQQ-----PVMSPPTGQRM 182

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BLAST of Lsi05G006790 vs. Swiss-Prot
Match: CNR2_MAIZE (Cell number regulator 2 OS=Zea mays GN=CNR2 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.8e-21
Identity = 45/114 (39.47%), Postives = 66/114 (57.89%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           +T   PC+TFGQ AE++D+G  +C     +YAL+M     Q +    YR ++R +Y L  
Sbjct: 63  VTCVCPCITFGQTAEIIDRGSTSCGTSGALYALVMLLTGCQCVYSCFYRAKMRAQYGLQV 122

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQHETVEVPP 115
           +P +D   H  C CC+LCQE+REL+KRG D ++GW+   A  +        VPP
Sbjct: 123 SPCSDCCVHCCCQCCALCQEYRELKKRGFDMSIGWH---ANMERQGRAAAAVPP 173

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BLAST of Lsi05G006790 vs. TrEMBL
Match: A0A0A0L6I3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099630 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.7e-64
Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE
Sbjct: 80  MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 139

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQHETVEVPPPRQTMF 120
           APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQ+ET+EVPPP QTMF
Sbjct: 140 APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQNETMEVPPPTQTMF 199

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BLAST of Lsi05G006790 vs. TrEMBL
Match: V7BX96_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G169200g PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.7e-51
Identity = 95/121 (78.51%), Postives = 107/121 (88.43%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           MT+FLPCVTFGQ+AEV+D GEL+CPLGS IY LMMPALCSQW+MGSKYRT+LR+RYNLVE
Sbjct: 41  MTSFLPCVTFGQMAEVLDGGELSCPLGSFIYLLMMPALCSQWIMGSKYRTKLRKRYNLVE 100

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQH--ETVEVPPPRQT 120
           APYTDI+SH+FCPCCSLCQEFRELR RGLDPALGWNGILAQ+ A Q   +T+  PP  Q 
Sbjct: 101 APYTDIVSHIFCPCCSLCQEFRELRIRGLDPALGWNGILAQKHAKQQSDQTLNNPPSNQF 160

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BLAST of Lsi05G006790 vs. TrEMBL
Match: A0A0B2NU40_GLYSO (Protein PLANT CADMIUM RESISTANCE 8 OS=Glycine soja GN=glysoja_030796 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 4.2e-50
Identity = 94/119 (78.99%), Postives = 105/119 (88.24%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           MTAF PCVTFGQIAEV D GEL+C LGS IY LMMPALCSQW+MGSKYRT+LR+RYNLVE
Sbjct: 50  MTAFFPCVTFGQIAEVQDGGELSCHLGSFIYLLMMPALCSQWIMGSKYRTKLRKRYNLVE 109

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQHETVEVPPPRQTM 120
           APYTDI+SH+FCPCCSLCQEFREL+ RGLDPALGWNGILAQ+Q+ Q  T++ PP  Q M
Sbjct: 110 APYTDIVSHIFCPCCSLCQEFRELKIRGLDPALGWNGILAQQQSDQ--TLKNPPLNQVM 166

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BLAST of Lsi05G006790 vs. TrEMBL
Match: C6TFF7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G016800 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 4.2e-50
Identity = 94/119 (78.99%), Postives = 105/119 (88.24%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           MTAF PCVTFGQIAEV D GEL+C LGS IY LMMPALCSQW+MGSKYRT+LR+RYNLVE
Sbjct: 50  MTAFFPCVTFGQIAEVQDGGELSCHLGSFIYLLMMPALCSQWIMGSKYRTKLRKRYNLVE 109

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQHETVEVPPPRQTM 120
           APYTDI+SH+FCPCCSLCQEFREL+ RGLDPALGWNGILAQ+Q+ Q  T++ PP  Q M
Sbjct: 110 APYTDIVSHIFCPCCSLCQEFRELKIRGLDPALGWNGILAQQQSDQ--TLKNPPLNQVM 166

[Close]

BLAST of Lsi05G006790 vs. TrEMBL
Match: A5C8F0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010506 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.1e-49
Identity = 90/121 (74.38%), Postives = 104/121 (85.95%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           MT F PCVTFGQIAEV+D+GE+TCPLGS IY LMMPALCSQW+MGSKYR +LR +Y+LVE
Sbjct: 72  MTTFFPCVTFGQIAEVVDEGEMTCPLGSFIYLLMMPALCSQWIMGSKYRAKLRRKYDLVE 131

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQHETVEVP-PPRQTM 120
           AP+ DI+SH+FCPCCSLCQEFREL+ RGLDPALGW GILAQRQ  Q++  E+  PP Q M
Sbjct: 132 APHQDIVSHIFCPCCSLCQEFRELKIRGLDPALGWKGILAQRQRGQNQDQELKVPPNQAM 191

[Close]

BLAST of Lsi05G006790 vs. TAIR10
Match: AT1G52200.1 (AT1G52200.1 PLAC8 family protein)

HSP 1 Score: 179.9 bits (455), Expect = 9.5e-46
Identity = 79/120 (65.83%), Postives = 95/120 (79.17%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           +T  +PCVTFGQIAEVMD+GE+TCPLG+ +Y LMMPALCS W+MGSKYR ++R ++NLVE
Sbjct: 69  LTTIVPCVTFGQIAEVMDEGEMTCPLGTFMYLLMMPALCSHWVMGSKYREKMRRKFNLVE 128

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQAT-QHETVEVPPPRQTM 120
           APY+D  SHV CPCCSLCQE+REL+ R LDP+LGWNGILAQ Q   + E     P  Q M
Sbjct: 129 APYSDCASHVLCPCCSLCQEYRELKIRNLDPSLGWNGILAQGQGQYEREAPSFAPTNQYM 188

[Close]

BLAST of Lsi05G006790 vs. TAIR10
Match: AT1G49030.1 (AT1G49030.1 PLAC8 family protein)

HSP 1 Score: 112.1 bits (279), Expect = 2.4e-25
Identity = 50/119 (42.02%), Postives = 74/119 (62.18%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           +T   P VTFGQIAEV+D+G  +C    ++Y L+        +    +RT+LR +Y L +
Sbjct: 104 ITCCFPFVTFGQIAEVIDEGATSCGTAGMLYGLICCLFAIPCVYTCTFRTKLRSKYGLPD 163

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQHETVEVPPPRQTM 120
           AP  D I+H FC  C+LCQE+REL+ RGLDP++GW G + +++  Q + +  PP  Q M
Sbjct: 164 APAPDWITHCFCEYCALCQEYRELKNRGLDPSIGWIGNVQKQRMGQQQEMMAPPMGQRM 222

[Close]

BLAST of Lsi05G006790 vs. TAIR10
Match: AT3G18470.1 (AT3G18470.1 PLAC8 family protein)

HSP 1 Score: 110.9 bits (276), Expect = 5.4e-25
Identity = 49/119 (41.18%), Postives = 72/119 (60.50%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           +T F PCVTFG+IA++ D+G   C    + Y L+   +    L    YRT++R ++ L E
Sbjct: 21  LTCFCPCVTFGRIADISDEGRTGCGRCGVFYGLICCVVGLPCLFSCTYRTKIRSKFGLPE 80

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQHETVEVPPPRQTM 120
           +P +D ++H FC CC+LCQE REL+ RGLDP++GW+G + +  A        PP  Q M
Sbjct: 81  SPTSDCVTHFFCECCALCQEHRELKTRGLDPSIGWSGNMQRTMA--------PPMSQQM 131

[Close]

BLAST of Lsi05G006790 vs. TAIR10
Match: AT3G18460.1 (AT3G18460.1 PLAC8 family protein)

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-22
Identity = 48/119 (40.34%), Postives = 71/119 (59.66%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           +T   PCVT GQIAE++D+G   C  G L+Y ++   +   ++    +R ++R +Y L +
Sbjct: 70  ITCLAPCVTLGQIAEIVDEGATPCATGGLLYGMIF-FIGVPFVYSCMFRAKMRNKYGLPD 129

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQHETVEVPPPRQTM 120
           AP  D I+H+FC  C+LCQE+REL+ RG DP +GW G +  +Q      V  PP  Q M
Sbjct: 130 APAPDWITHLFCEHCALCQEYRELKHRGFDPNIGWAGNVQAQQ-----PVMSPPTGQRM 182

[Close]

BLAST of Lsi05G006790 vs. TAIR10
Match: AT1G58320.1 (AT1G58320.1 PLAC8 family protein)

HSP 1 Score: 99.4 bits (246), Expect = 1.6e-21
Identity = 47/91 (51.65%), Postives = 58/91 (63.74%), Query Frame = 1


Query: 6   PCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVEAPYTD 65
           PCV FG+IAE++D+GE +  L  L+   M    C  W   SKYR +LR +Y L EAP  D
Sbjct: 39  PCVAFGRIAEILDKGETSRGLAGLMVVAMSSIGCG-WYYASKYRAKLRHQYALPEAPCAD 98

Query: 66  IISHVFCPCCSLCQEFRELRKRGLDPALGWN 97
              H FC  C+L QE REL+ RGLDP+LGWN
Sbjct: 99  GAIHCFCCPCALTQEHRELKHRGLDPSLGWN 128

[Close]

BLAST of Lsi05G006790 vs. NCBI nr
Match: gi|778676237|ref|XP_011650553.1| (PREDICTED: protein PLANT CADMIUM RESISTANCE 8 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 2.5e-64
Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE
Sbjct: 80  MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 139

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQHETVEVPPPRQTMF 120
           APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQ+ET+EVPPP QTMF
Sbjct: 140 APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQNETMEVPPPTQTMF 199

[Close]

BLAST of Lsi05G006790 vs. NCBI nr
Match: gi|659102766|ref|XP_008452303.1| (PREDICTED: protein PLANT CADMIUM RESISTANCE 8 [Cucumis melo])

HSP 1 Score: 251.5 bits (641), Expect = 7.3e-64
Identity = 116/120 (96.67%), Postives = 119/120 (99.17%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE
Sbjct: 80  MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 139

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQHETVEVPPPRQTMF 120
           APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQ+ET++VPPP QTMF
Sbjct: 140 APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQNETMKVPPPTQTMF 199

[Close]

BLAST of Lsi05G006790 vs. NCBI nr
Match: gi|593700399|ref|XP_007150638.1| (hypothetical protein PHAVU_005G169200g [Phaseolus vulgaris])

HSP 1 Score: 209.9 bits (533), Expect = 2.4e-51
Identity = 95/121 (78.51%), Postives = 107/121 (88.43%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           MT+FLPCVTFGQ+AEV+D GEL+CPLGS IY LMMPALCSQW+MGSKYRT+LR+RYNLVE
Sbjct: 41  MTSFLPCVTFGQMAEVLDGGELSCPLGSFIYLLMMPALCSQWIMGSKYRTKLRKRYNLVE 100

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQH--ETVEVPPPRQT 120
           APYTDI+SH+FCPCCSLCQEFRELR RGLDPALGWNGILAQ+ A Q   +T+  PP  Q 
Sbjct: 101 APYTDIVSHIFCPCCSLCQEFRELRIRGLDPALGWNGILAQKHAKQQSDQTLNNPPSNQF 160

[Close]

BLAST of Lsi05G006790 vs. NCBI nr
Match: gi|359806549|ref|NP_001241518.1| (uncharacterized protein LOC100788713 [Glycine max])

HSP 1 Score: 205.3 bits (521), Expect = 6.0e-50
Identity = 94/119 (78.99%), Postives = 105/119 (88.24%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           MTAF PCVTFGQIAEV D GEL+C LGS IY LMMPALCSQW+MGSKYRT+LR+RYNLVE
Sbjct: 50  MTAFFPCVTFGQIAEVQDGGELSCHLGSFIYLLMMPALCSQWIMGSKYRTKLRKRYNLVE 109

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQHETVEVPPPRQTM 120
           APYTDI+SH+FCPCCSLCQEFREL+ RGLDPALGWNGILAQ+Q+ Q  T++ PP  Q M
Sbjct: 110 APYTDIVSHIFCPCCSLCQEFRELKIRGLDPALGWNGILAQQQSDQ--TLKNPPLNQVM 166

[Close]

BLAST of Lsi05G006790 vs. NCBI nr
Match: gi|950973362|ref|XP_014500707.1| (PREDICTED: LOW QUALITY PROTEIN: protein PLANT CADMIUM RESISTANCE 8 [Vigna radiata var. radiata])

HSP 1 Score: 204.5 bits (519), Expect = 1.0e-49
Identity = 92/121 (76.03%), Postives = 105/121 (86.78%), Query Frame = 1


Query: 1   MTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRERYNLVE 60
           MT+F PCVTFGQIAE++D GEL+C LGS IY LMMPALCSQW+MGSKYRT+LR+RYNLVE
Sbjct: 50  MTSFFPCVTFGQIAEILDGGELSCHLGSFIYLLMMPALCSQWIMGSKYRTKLRKRYNLVE 109

Query: 61  APYTDIISHVFCPCCSLCQEFRELRKRGLDPALGWNGILAQRQATQH--ETVEVPPPRQT 120
           APYTDI+SH+FCPCCSLCQEFREL+ RGLDPALGWNGILAQ+ A Q   +T+  PP  Q 
Sbjct: 110 APYTDIVSHIFCPCCSLCQEFRELKIRGLDPALGWNGILAQKHAKQQSDQTLNNPPSNQF 169

The following BLAST results are available for this feature:

BLAST of Lsi05G006790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PCR8_ARATH	1.7e-44	65.83	Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis thaliana GN=PCR8 PE=1 SV=2	[more]
PCR6_ARATH	4.3e-24	42.02	Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana GN=PCR6 PE=2 SV=1	[more]
PCR7_ARATH	9.6e-24	41.18	Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana GN=PCR7 PE=2 SV=1	[more]
PCR4_ARATH	3.4e-21	40.34	Protein PLANT CADMIUM RESISTANCE 4 OS=Arabidopsis thaliana GN=PCR4 PE=3 SV=1	[more]
CNR2_MAIZE	5.8e-21	39.47	Cell number regulator 2 OS=Zea mays GN=CNR2 PE=2 SV=1	[more]

BLAST of Lsi05G006790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6I3_CUCSA	1.7e-64	97.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099630 PE=4 SV=1	[more]
V7BX96_PHAVU	1.7e-51	78.51	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G169200g PE=4 SV=1	[more]
A0A0B2NU40_GLYSO	4.2e-50	78.99	Protein PLANT CADMIUM RESISTANCE 8 OS=Glycine soja GN=glysoja_030796 PE=4 SV=1	[more]
C6TFF7_SOYBN	4.2e-50	78.99	Uncharacterized protein OS=Glycine max GN=GLYMA_15G016800 PE=2 SV=1	[more]
A5C8F0_VITVI	2.1e-49	74.38	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010506 PE=4 SV=1	[more]

BLAST of Lsi05G006790 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G52200.1	9.5e-46	65.83	PLAC8 family protein	[more]
AT1G49030.1	2.4e-25	42.02	PLAC8 family protein	[more]
AT3G18470.1	5.4e-25	41.18	PLAC8 family protein	[more]
AT3G18460.1	1.9e-22	40.34	PLAC8 family protein	[more]
AT1G58320.1	1.6e-21	51.65	PLAC8 family protein	[more]

BLAST of Lsi05G006790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778676237\|ref\|XP_011650553.1\|	2.5e-64	97.50	PREDICTED: protein PLANT CADMIUM RESISTANCE 8 [Cucumis sativus]	[more]
gi\|659102766\|ref\|XP_008452303.1\|	7.3e-64	96.67	PREDICTED: protein PLANT CADMIUM RESISTANCE 8 [Cucumis melo]	[more]
gi\|593700399\|ref\|XP_007150638.1\|	2.4e-51	78.51	hypothetical protein PHAVU_005G169200g [Phaseolus vulgaris]	[more]
gi\|359806549\|ref\|NP_001241518.1\|	6.0e-50	78.99	uncharacterized protein LOC100788713 [Glycine max]	[more]
gi\|950973362\|ref\|XP_014500707.1\|	1.0e-49	76.03	PREDICTED: LOW QUALITY PROTEIN: protein PLANT CADMIUM RESISTANCE 8 [Vigna radiat...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006461	PLAC_motif_containing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0006865	amino acid transport
biological_process	GO:0030003	cellular cation homeostasis
biological_process	GO:0070838	divalent metal ion transport
biological_process	GO:0009684	indoleacetic acid biosynthetic process
biological_process	GO:0015706	nitrate transport
biological_process	GO:0010167	response to nitrate
biological_process	GO:0009611	response to wounding
biological_process	GO:0006569	tryptophan catabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005623	cell
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G006790.1	Lsi05G006790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006461	PLAC8 motif-containing protein	PFAM	PF04749	PLAC8	coord: 2..83 score: 3.1
IPR006461	PLAC8 motif-containing protein	TIGRFAMs	TIGR01571	TIGR01571	coord: 2..85 score: 9.5
None	No IPR available	PANTHER	PTHR15907	FAMILY NOT NAMED	coord: 1..119 score: 1.1
None	No IPR available	PANTHER	PTHR15907:SF46	PROTEIN PLANT CADMIUM RESISTANCE 8	coord: 1..119 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G006790	Csa3G099630	Cucumber (Chinese Long) v2	culsiB198
Lsi05G006790	CSPI03G05800	Wild cucumber (PI 183967)	cpilsiB197
Lsi05G006790	Cucsa.074420	Cucumber (Gy14) v1	cgylsiB074
Lsi05G006790	MELO3C016564	Melon (DHL92) v3.5.1	lsimeB380
Lsi05G006790	ClCG10G006420	Watermelon (Charleston Gray)	lsiwcgB318
Lsi05G006790	MELO3C016564.2	Melon (DHL92) v3.6.1	lsimedB387
Lsi05G006790	Cla97C10G190380	Watermelon (97103) v2	lsiwmbB322
Lsi05G006790	CsGy3G005920	Cucumber (Gy14) v2	cgyblsiB183
Lsi05G006790	CsaV3_3G005900	Cucumber (Chinese Long) v3	cuclsiB217

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G006790	Wax gourd	lsiwgoB410
Lsi05G006790	Wax gourd	lsiwgoB415
Lsi05G006790	Bottle gourd (USVL1VR-Ls)	lsilsiB107
Lsi05G006790	Bottle gourd (USVL1VR-Ls)	lsilsiB136
Lsi05G006790	Cucurbita maxima (Rimu)	cmalsiB030
Lsi05G006790	Cucurbita maxima (Rimu)	cmalsiB315
Lsi05G006790	Cucurbita maxima (Rimu)	cmalsiB691
Lsi05G006790	Cucurbita moschata (Rifu)	cmolsiB018
Lsi05G006790	Cucurbita moschata (Rifu)	cmolsiB305
Lsi05G006790	Cucurbita moschata (Rifu)	cmolsiB684
Lsi05G006790	Cucurbita pepo (Zucchini)	cpelsiB176
Lsi05G006790	Cucurbita pepo (Zucchini)	cpelsiB370
Lsi05G006790	Watermelon (97103) v1	lsiwmB358
Lsi05G006790	Watermelon (97103) v1	lsiwmB354
Lsi05G006790	Cucumber (Gy14) v2	cgyblsiB053
Lsi05G006790	Silver-seed gourd	carlsiB195
Lsi05G006790	Silver-seed gourd	carlsiB616
Lsi05G006790	Silver-seed gourd	carlsiB827
Lsi05G006790	Cucumber (Chinese Long) v3	cuclsiB065
Lsi05G006790	Watermelon (97103) v2	lsiwmbB328