Lsi05G004610 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G004610
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionRibonucleoside-diphosphate reductase small chain
Locationchr05 : 5888414 .. 5889400 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTGCAATTCCCGATGAGCCTCTCCTTGCCTCCAACCCCGATCGTTTCTGCATGTTCCCGATTCAGTATCCTCAAATCTGGGAGATGTACAAGAAAGCCGAAGCCTCCTTCTGGACTGCCGAGGAAGTCGATCTCTCACAGGACCTTCGCCATTGGGAATCCTTAACTTCCGACGAGAAACACTTCATCACTCACGTTCTTGCCTTCTTCGCTGCTTCTGATGGCATCGTTTTGGAGAATCTCGCCGGACGCTTCATGAAAGAAGTTCAAGTGGCTGAAGCCAGAGCCTTCTATGGATTCCAAATTGCGATCGAGAATATCCACTCTGAGATGTACAGTCTTCTCCTTGAAACCTATATCAAGGATTCGATTGAGAAGAATCGGTTATTCCGTGCTATTGAAACTGTCCCCTGCGTCAAGAAAAAGGCTGATTGGGCGTTGAAGTGGATTGACAGTACAGAATCGTTCGCTGAGCGGATTTTGGCGTTCGCTTGTGTTGAGGGAATTTTCTTCTCAGGTAGTTTCTGCTCTATTTTCTGGTTAAAAAAACGTGGGCTAATGCCTGGATTAACGTTCTCAAATGAGTTGATTTCAAGAGATGAAGGGCTTCATTGTGATTTTGCTTGTTTGTTGTATTCATTATTGAGGAAGAAACTGAGTGAGGATCGAGTGAAGGAGATTGTAACAGAGGCAGTAGATATAGAGAGGGAATTTGTGTGTGATGCGTTGCCAGTGGCTCTTGTTGGAATGAATGGGGATTTGATGAGCCAATACATAGAATTTGTGACAGATAGGTTGGTTGGAGCCTTAGGGTATGAGAAAATCTACAACGTTCAAAATCCATTTGATTGGATGGAGTTGATTTCATTGCAGGGGAAGACTAATTTCTTTGAGAAAAGAGTTGGTGAATATCAAAAGGCATCTGTGATGTCAAATTTAAATGGAAATGGGGGTCATGTGTTTAAGATGGATGAGGATTTCTGA

mRNA sequence

ATGCCTGCAATTCCCGATGAGCCTCTCCTTGCCTCCAACCCCGATCGTTTCTGCATGTTCCCGATTCAGTATCCTCAAATCTGGGAGATGTACAAGAAAGCCGAAGCCTCCTTCTGGACTGCCGAGGAAGTCGATCTCTCACAGGACCTTCGCCATTGGGAATCCTTAACTTCCGACGAGAAACACTTCATCACTCACGTTCTTGCCTTCTTCGCTGCTTCTGATGGCATCGTTTTGGAGAATCTCGCCGGACGCTTCATGAAAGAAGTTCAAGTGGCTGAAGCCAGAGCCTTCTATGGATTCCAAATTGCGATCGAGAATATCCACTCTGAGATGTACAGTCTTCTCCTTGAAACCTATATCAAGGATTCGATTGAGAAGAATCGGTTATTCCGTGCTATTGAAACTGTCCCCTGCGTCAAGAAAAAGGCTGATTGGGCGTTGAAGTGGATTGACAGTACAGAATCGTTCGCTGAGCGGATTTTGGCGTTCGCTTGTGTTGAGGGAATTTTCTTCTCAGGTAGTTTCTGCTCTATTTTCTGGTTAAAAAAACGTGGGCTAATGCCTGGATTAACGTTCTCAAATGAGTTGATTTCAAGAGATGAAGGGCTTCATTGTGATTTTGCTTGTTTGTTGTATTCATTATTGAGGAAGAAACTGAGTGAGGATCGAGTGAAGGAGATTGTAACAGAGGCAGTAGATATAGAGAGGGAATTTGTGTGTGATGCGTTGCCAGTGGCTCTTGTTGGAATGAATGGGGATTTGATGAGCCAATACATAGAATTTGTGACAGATAGGTTGGTTGGAGCCTTAGGGTATGAGAAAATCTACAACGTTCAAAATCCATTTGATTGGATGGAGTTGATTTCATTGCAGGGGAAGACTAATTTCTTTGAGAAAAGAGTTGGTGAATATCAAAAGGCATCTGTGATGTCAAATTTAAATGGAAATGGGGGTCATGTGTTTAAGATGGATGAGGATTTCTGA

Coding sequence (CDS)

ATGCCTGCAATTCCCGATGAGCCTCTCCTTGCCTCCAACCCCGATCGTTTCTGCATGTTCCCGATTCAGTATCCTCAAATCTGGGAGATGTACAAGAAAGCCGAAGCCTCCTTCTGGACTGCCGAGGAAGTCGATCTCTCACAGGACCTTCGCCATTGGGAATCCTTAACTTCCGACGAGAAACACTTCATCACTCACGTTCTTGCCTTCTTCGCTGCTTCTGATGGCATCGTTTTGGAGAATCTCGCCGGACGCTTCATGAAAGAAGTTCAAGTGGCTGAAGCCAGAGCCTTCTATGGATTCCAAATTGCGATCGAGAATATCCACTCTGAGATGTACAGTCTTCTCCTTGAAACCTATATCAAGGATTCGATTGAGAAGAATCGGTTATTCCGTGCTATTGAAACTGTCCCCTGCGTCAAGAAAAAGGCTGATTGGGCGTTGAAGTGGATTGACAGTACAGAATCGTTCGCTGAGCGGATTTTGGCGTTCGCTTGTGTTGAGGGAATTTTCTTCTCAGGTAGTTTCTGCTCTATTTTCTGGTTAAAAAAACGTGGGCTAATGCCTGGATTAACGTTCTCAAATGAGTTGATTTCAAGAGATGAAGGGCTTCATTGTGATTTTGCTTGTTTGTTGTATTCATTATTGAGGAAGAAACTGAGTGAGGATCGAGTGAAGGAGATTGTAACAGAGGCAGTAGATATAGAGAGGGAATTTGTGTGTGATGCGTTGCCAGTGGCTCTTGTTGGAATGAATGGGGATTTGATGAGCCAATACATAGAATTTGTGACAGATAGGTTGGTTGGAGCCTTAGGGTATGAGAAAATCTACAACGTTCAAAATCCATTTGATTGGATGGAGTTGATTTCATTGCAGGGGAAGACTAATTTCTTTGAGAAAAGAGTTGGTGAATATCAAAAGGCATCTGTGATGTCAAATTTAAATGGAAATGGGGGTCATGTGTTTAAGATGGATGAGGATTTCTGA

Protein sequence

MPAIPDEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDEKHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSIEKNRLFRAIETVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFVCDALPVALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSNLNGNGGHVFKMDEDF
Homology
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BLAST of Lsi05G004610 vs. Swiss-Prot
Match: RIR2_TOBAC (Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 1.1e-167
Identity = 285/329 (86.63%), Postives = 309/329 (93.92%), Query Frame = 1 

Query: 1   MPAIPDEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MP IP+EPLLAS+PDRFCMFPIQYPQIWEMYKKA ASFWTAEEVDLS D RHWE+LT  E
Sbjct: 1   MPLIPEEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWETLTPGE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           +HFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLE+Y
Sbjct: 61  RHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESY 120

Query: 121 IKDSIEKNRLFRAIETVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDS EK+RLFRA+ET PCV+KKA WAL+WID +E+FAER++AFACVEGIFFSGSFC+IF
Sbjct: 121 IKDSDEKSRLFRAVETNPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCAIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KL+E+RVK IV +AV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLTEERVKGIVADAVEIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALP ALVGMNGDLMS+YIEFV DRL+ ALGY+K+YN QNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSKYIEFVADRLLDALGYDKLYNAQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGG-HVFKMDEDF 329
           RVGEYQKASVMS+LNGNG  H FK+DEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGATHEFKLDEDF 329

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BLAST of Lsi05G004610 vs. Swiss-Prot
Match: RIR2C_ARATH (Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis thaliana GN=TSO2 PE=1 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 6.6e-160
Identity = 273/332 (82.23%), Postives = 300/332 (90.36%), Query Frame = 1 

Query: 1   MPAIPDEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-SLTSD 60
           MP++P+EPLL   PDRFCMFPI YPQIWEMYKKAEASFWTAEEVDLSQD R WE SL   
Sbjct: 1   MPSMPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDG 60

Query: 61  EKHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLET 120
           E+HFI HVLAFFAASDGIVLENLA RFM +VQV+EARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61  ERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDT 120

Query: 121 YIKDSIEKNRLFRAIETVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSI 180
           YIKD+ E++ LFRAIET+PCV KKA WA+KWID +++FAERI+AFACVEGIFFSGSFCSI
Sbjct: 121 YIKDNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSI 180

Query: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREF 240
           FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+LL+ KLSE+RVK IV +AV+IEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREF 240

Query: 241 VCDALPVALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFE 300
           VCDALP ALVGMN DLMSQYIEFV DRL+GALGY K+Y V NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFE 300

Query: 301 KRVGEYQKASVMSNLNGNG---GHVFKMDEDF 329
           KRVG+YQKASVMS++NGNG    HVF +DEDF
Sbjct: 301 KRVGDYQKASVMSSVNGNGAFDNHVFSLDEDF 332

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BLAST of Lsi05G004610 vs. Swiss-Prot
Match: RI2BL_ARATH (Ribonucleoside-diphosphate reductase small chain B OS=Arabidopsis thaliana GN=RNR2B PE=2 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 2.1e-158
Identity = 269/333 (80.78%), Postives = 302/333 (90.69%), Query Frame = 1 

Query: 1   MPAIPDEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-SLTSD 60
           MP++P+EP+L   PDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD R WE SLT+D
Sbjct: 1   MPSMPEEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTND 60

Query: 61  EKHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLET 120
           E+HFI HVLAFFAASDGIVLENL+ RFM +VQ++EARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61  ERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDT 120

Query: 121 YIKDSIEKNRLFRAIETVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSI 180
           YIKD+ E++ LFRAIET+PCV KKA+WA+KWI+ ++SFAERI+AFACVEGIFFSGSFCSI
Sbjct: 121 YIKDNKERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSI 180

Query: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREF 240
           FWLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSLLR KL EDR+K IV +AV+IEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKLDEDRLKAIVCDAVEIEREF 240

Query: 241 VCDALPVALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFE 300
           VCDALP ALVGMN +LMSQYIEFV DRL+ ALG  K+Y V NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRELMSQYIEFVADRLLAALGCAKVYGVSNPFDWMELISLQGKTNFFE 300

Query: 301 KRVGEYQKASVMSNLNGNGG----HVFKMDEDF 329
           KRVGEYQKAS+MS+++GN      HVFK+DEDF
Sbjct: 301 KRVGEYQKASIMSSVHGNAAFNDDHVFKLDEDF 333

[Close]
BLAST of Lsi05G004610 vs. Swiss-Prot
Match: RIR2A_ARATH (Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis thaliana GN=RNR2A PE=1 SV=2)

HSP 1 Score: 505.4 bits (1300), Expect = 4.8e-142
Identity = 245/324 (75.62%), Postives = 277/324 (85.49%), Query Frame = 1 

Query: 6   DEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDEKHFIT 65
           +EPLL +   RF MFPI+Y  IWEMYKKAEASFWTAEEVDLS D++ WE+LT  EKHFI+
Sbjct: 18  EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFIS 77

Query: 66  HVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSI 125
           H+LAFFAASDGIVLENLA RF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET+IKDS 
Sbjct: 78  HILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSK 137

Query: 126 EKNRLFRAIETVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIFWLKKR 185
           EK+RLF AIET+PC+ KKA W L WI S  SFA R++AFACVEGIFFSGSFC+IFWLKKR
Sbjct: 138 EKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKR 197

Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFVCDALP 245
           GLMPGLTFSNELISRDEGLHCDFACLLYSLL+K+L  ++V +IV EAV+IE EFVC ALP
Sbjct: 198 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPLEKVYQIVHEAVEIETEFVCKALP 257

Query: 246 VALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFEKRVGEY 305
             L+GMN +LMSQYI+FV DRL+  LG E+ Y  +NPFDWME ISLQGKTNFFEKRVGEY
Sbjct: 258 CDLIGMNSNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRVGEY 317

Query: 306 QKASVMSNL-NGNGGHVFKMDEDF 329
           QKASVMSNL NGN  + F  +EDF
Sbjct: 318 QKASVMSNLQNGNQNYEFTTEEDF 341

[Close]
BLAST of Lsi05G004610 vs. Swiss-Prot
Match: RIR2_RAT (Ribonucleoside-diphosphate reductase subunit M2 OS=Rattus norvegicus GN=Rrm2 PE=2 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 1.8e-133
Identity = 234/328 (71.34%), Postives = 272/328 (82.93%), Query Frame = 1 

Query: 2   PAIPDEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDEK 61
           P+I +EPLL  NP RF +FPI+Y  IW+MYKKAEASFWTAEEVDLS+D++HWE+L  DE+
Sbjct: 66  PSIEEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125

Query: 62  HFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
           HFI+HVLAFFAASDGIV ENL  RF +EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185

Query: 122 KDSIEKNRLFRAIETVPCVKKKADWALKWI-DSTESFAERILAFACVEGIFFSGSFCSIF 181
           KDS E+  LF AIET+PCVKKKADWAL+WI D   ++ ER++AFA VEGIFFSGSF SIF
Sbjct: 186 KDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245

Query: 182 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 241
           WLKKRGLMPGLTFSNELISRDEGLHCDFACL++  L  K SE RVKEI+T +V IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIITNSVRIEQEFL 305

Query: 242 CDALPVALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFEK 301
            +ALPV L+GMN  LM QYIEFV DRL+  LG+ KI+ V+NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEK 365

Query: 302 RVGEYQKASVMSNLNGNGGHVFKMDEDF 329
           RVGEYQ+  VMSN   N    F +D DF
Sbjct: 366 RVGEYQRMGVMSNSTENS---FTLDADF 390

[Close]
BLAST of Lsi05G004610 vs. TrEMBL
Match: A0A0A0L8R8_CUCSA (Ribonucleoside-diphosphate reductase small chain OS=Cucumis sativus GN=Csa_3G597320 PE=4 SV=1)

HSP 1 Score: 637.5 bits (1643), Expect = 9.0e-180
Identity = 313/329 (95.14%), Postives = 319/329 (96.96%), Query Frame = 1 

Query: 1   MPAIPDEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MP+IPDEPLLA NPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD RHW+SLTSDE
Sbjct: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAE RAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSIEKNRLFRAIETVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDS EKNRLF AI+TVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKL+ DRVKEIV EAV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALPVALVGMNGDLMSQYIEFV DRLVGALGY+KIYNVQNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGG-HVFKMDEDF 329
           RVGEYQKASVMSNLNGNGG H FKMDEDF
Sbjct: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 329

[Close]
BLAST of Lsi05G004610 vs. TrEMBL
Match: A0A0L9U8J2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g242800 PE=4 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 1.2e-171
Identity = 293/329 (89.06%), Postives = 313/329 (95.14%), Query Frame = 1 

Query: 1   MPAIPDEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MPAIP+EPLLA NPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW+SLT  E
Sbjct: 1   MPAIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWDSLTDGE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           +HFITH+LAFFAASDGIVLENLA RFMKE+Q AEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  RHFITHILAFFAASDGIVLENLAARFMKEIQAAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSIEKNRLFRAIETVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDS EKN LFRA++T+PCV KKA WAL+WID+T+SFAER++AFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSTEKNHLFRAVDTIPCVAKKAQWALRWIDATDSFAERLVAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKL+E+RVKEIV EAVDIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLTEERVKEIVREAVDIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALP ALVGMNG+LMSQYIEFV DRL+GALG  K+Y VQNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYGVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGG-HVFKMDEDF 329
           RVG+YQKASVMS+LNGNGG HVFKMDEDF
Sbjct: 301 RVGDYQKASVMSSLNGNGGAHVFKMDEDF 329

[Close]
BLAST of Lsi05G004610 vs. TrEMBL
Match: B9RBH6_RICCO (Ribonucleoside-diphosphate reductase small chain, putative OS=Ricinus communis GN=RCOM_1677000 PE=4 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 2.0e-171
Identity = 296/329 (89.97%), Postives = 314/329 (95.44%), Query Frame = 1 

Query: 1   MPAIPDEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MPAIP+EPLLA NPDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLSQDLRHWESLT DE
Sbjct: 1   MPAIPEEPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDLRHWESLTPDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFI+HVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFISHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSIEKNRLFRAIETVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDS EKNRLF AIETVPC+ KKA+WALKWID +ESFAERI+AFACVEGIFFSGSFC+IF
Sbjct: 121 IKDSNEKNRLFHAIETVPCIAKKAEWALKWIDGSESFAERIIAFACVEGIFFSGSFCAIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSLL+KKLSE+RVK IV +AV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLKKKLSEERVKGIVRDAVNIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALP ALVGMNG+LMSQYIEFV DRL+GALG  K YNV NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGCGKEYNVSNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGG-HVFKMDEDF 329
           RVGEYQKA+VMS++NGNGG HVFKMDEDF
Sbjct: 301 RVGEYQKAAVMSSINGNGGTHVFKMDEDF 329

[Close]
BLAST of Lsi05G004610 vs. TrEMBL
Match: V7D141_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G190100g PE=4 SV=1)

HSP 1 Score: 609.4 bits (1570), Expect = 2.6e-171
Identity = 293/329 (89.06%), Postives = 314/329 (95.44%), Query Frame = 1 

Query: 1   MPAIPDEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MPAIP+EPLLA NPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW+SLT  E
Sbjct: 1   MPAIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWDSLTDGE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           +HFITHVLAFFAASDGIVLENLA RFMKE+QV+EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  RHFITHVLAFFAASDGIVLENLAARFMKEIQVSEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSIEKNRLFRAIETVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDS EKN LFRA++T+PCV KKA WAL+WID+T+SFAERI+AFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSTEKNHLFRAVDTIPCVAKKAQWALRWIDATDSFAERIVAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKL+E+RVKEIV +AVDIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLTEERVKEIVRDAVDIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALP ALVGMNG+LMSQYIEFV DRL+GALG  K+Y+VQNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYDVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGG-HVFKMDEDF 329
           RVG+YQKASVMS+LNGNGG HVF MDEDF
Sbjct: 301 RVGDYQKASVMSSLNGNGGAHVFNMDEDF 329

[Close]
BLAST of Lsi05G004610 vs. TrEMBL
Match: A0A067FZP6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040427mg PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 1.0e-170
Identity = 294/329 (89.36%), Postives = 312/329 (94.83%), Query Frame = 1 

Query: 1   MPAIPDEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MP+IP+EPLLA NPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE+LT+DE
Sbjct: 1   MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHF+THVLAFFAASDGIVLENLAGRFM EVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSIEKNRLFRAIETVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDS EKNRLF AIETVPCV KKA WAL WID +E+FAER++AFACVEGIFFSGSFC+IF
Sbjct: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KLSE+RVK +V EAV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALP ALVGMNG+LMSQYIEFV DRL+GALGY K+Y V NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGG-HVFKMDEDF 329
           RVGEYQKASVMS+LNGNGG HVFK+DEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329

[Close]
BLAST of Lsi05G004610 vs. TAIR10
Match: AT3G27060.1 (AT3G27060.1 Ferritin/ribonucleotide reductase-like family protein)

HSP 1 Score: 564.7 bits (1454), Expect = 3.7e-161
Identity = 273/332 (82.23%), Postives = 300/332 (90.36%), Query Frame = 1 

Query: 1   MPAIPDEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-SLTSD 60
           MP++P+EPLL   PDRFCMFPI YPQIWEMYKKAEASFWTAEEVDLSQD R WE SL   
Sbjct: 1   MPSMPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDG 60

Query: 61  EKHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLET 120
           E+HFI HVLAFFAASDGIVLENLA RFM +VQV+EARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61  ERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDT 120

Query: 121 YIKDSIEKNRLFRAIETVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSI 180
           YIKD+ E++ LFRAIET+PCV KKA WA+KWID +++FAERI+AFACVEGIFFSGSFCSI
Sbjct: 121 YIKDNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSI 180

Query: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREF 240
           FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+LL+ KLSE+RVK IV +AV+IEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREF 240

Query: 241 VCDALPVALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFE 300
           VCDALP ALVGMN DLMSQYIEFV DRL+GALGY K+Y V NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFE 300

Query: 301 KRVGEYQKASVMSNLNGNG---GHVFKMDEDF 329
           KRVG+YQKASVMS++NGNG    HVF +DEDF
Sbjct: 301 KRVGDYQKASVMSSVNGNGAFDNHVFSLDEDF 332

[Close]
BLAST of Lsi05G004610 vs. TAIR10
Match: AT3G23580.1 (AT3G23580.1 ribonucleotide reductase 2A)

HSP 1 Score: 505.4 bits (1300), Expect = 2.7e-143
Identity = 245/324 (75.62%), Postives = 277/324 (85.49%), Query Frame = 1 

Query: 6   DEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDEKHFIT 65
           +EPLL +   RF MFPI+Y  IWEMYKKAEASFWTAEEVDLS D++ WE+LT  EKHFI+
Sbjct: 18  EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFIS 77

Query: 66  HVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSI 125
           H+LAFFAASDGIVLENLA RF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET+IKDS 
Sbjct: 78  HILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSK 137

Query: 126 EKNRLFRAIETVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIFWLKKR 185
           EK+RLF AIET+PC+ KKA W L WI S  SFA R++AFACVEGIFFSGSFC+IFWLKKR
Sbjct: 138 EKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKR 197

Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFVCDALP 245
           GLMPGLTFSNELISRDEGLHCDFACLLYSLL+K+L  ++V +IV EAV+IE EFVC ALP
Sbjct: 198 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPLEKVYQIVHEAVEIETEFVCKALP 257

Query: 246 VALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFEKRVGEY 305
             L+GMN +LMSQYI+FV DRL+  LG E+ Y  +NPFDWME ISLQGKTNFFEKRVGEY
Sbjct: 258 CDLIGMNSNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRVGEY 317

Query: 306 QKASVMSNL-NGNGGHVFKMDEDF 329
           QKASVMSNL NGN  + F  +EDF
Sbjct: 318 QKASVMSNLQNGNQNYEFTTEEDF 341

[Close]
BLAST of Lsi05G004610 vs. NCBI nr
Match: gi|449455910|ref|XP_004145693.1| (PREDICTED: ribonucleoside-diphosphate reductase small chain [Cucumis sativus])

HSP 1 Score: 637.5 bits (1643), Expect = 1.3e-179
Identity = 313/329 (95.14%), Postives = 319/329 (96.96%), Query Frame = 1 

Query: 1   MPAIPDEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MP+IPDEPLLA NPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD RHW+SLTSDE
Sbjct: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAE RAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSIEKNRLFRAIETVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDS EKNRLF AI+TVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKL+ DRVKEIV EAV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALPVALVGMNGDLMSQYIEFV DRLVGALGY+KIYNVQNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGG-HVFKMDEDF 329
           RVGEYQKASVMSNLNGNGG H FKMDEDF
Sbjct: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 329

[Close]
BLAST of Lsi05G004610 vs. NCBI nr
Match: gi|659098154|ref|XP_008450003.1| (PREDICTED: ribonucleoside-diphosphate reductase small chain [Cucumis melo])

HSP 1 Score: 636.7 bits (1641), Expect = 2.2e-179
Identity = 312/329 (94.83%), Postives = 320/329 (97.26%), Query Frame = 1 

Query: 1   MPAIPDEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MP+IPDEPLLA NPDRFCMFPIQYPQIWEMYKKA ASFWTAEEVDLSQDLRHW+SLTSDE
Sbjct: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSQDLRHWDSLTSDE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFIT+VLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQI IENIHSEMYSLLLETY
Sbjct: 61  KHFITYVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQICIENIHSEMYSLLLETY 120

Query: 121 IKDSIEKNRLFRAIETVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDS EKNRLF AI+TVPCVKKKADWALKWIDST+SFAERILAFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSSEKNRLFHAIDTVPCVKKKADWALKWIDSTDSFAERILAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRV++IVTEAVDIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVRQIVTEAVDIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALPVALVGMNGDLMSQYIEFV DRLVG LGYEKIYNVQNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGTLGYEKIYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGG-HVFKMDEDF 329
           RVGEYQKASVMS+LNGNGG H FKMDEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGGIHEFKMDEDF 329

[Close]
BLAST of Lsi05G004610 vs. NCBI nr
Match: gi|1009151915|ref|XP_015893811.1| (PREDICTED: ribonucleoside-diphosphate reductase small chain [Ziziphus jujuba])

HSP 1 Score: 617.5 bits (1591), Expect = 1.4e-173
Identity = 298/329 (90.58%), Postives = 316/329 (96.05%), Query Frame = 1 

Query: 1   MPAIPDEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MPA P+EPLLA NPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD+RHWE+LT DE
Sbjct: 75  MPAYPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDVRHWENLTPDE 134

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFI+HVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 135 KHFISHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 194

Query: 121 IKDSIEKNRLFRAIETVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKD +EKNRLF AIETVPCV KKA+WAL+WID TESFAER++AFACVEGIFFSGSFC+IF
Sbjct: 195 IKDPVEKNRLFHAIETVPCVAKKAEWALRWIDGTESFAERLVAFACVEGIFFSGSFCAIF 254

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+L+RKKLSE+RVK IV +AVDIEREFV
Sbjct: 255 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLMRKKLSEERVKGIVRDAVDIEREFV 314

Query: 241 CDALPVALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALP ALVGMNGDLMSQYIEFV DRL+GALGY KIYNVQNPFDWMELISLQGKTNFFEK
Sbjct: 315 CDALPCALVGMNGDLMSQYIEFVADRLLGALGYGKIYNVQNPFDWMELISLQGKTNFFEK 374

Query: 301 RVGEYQKASVMSNLNGNGG-HVFKMDEDF 329
           RVGEYQKASVMS++NG+GG HVFKMDEDF
Sbjct: 375 RVGEYQKASVMSSINGDGGTHVFKMDEDF 403

[Close]
BLAST of Lsi05G004610 vs. NCBI nr
Match: gi|1012193886|ref|XP_015971322.1| (PREDICTED: ribonucleoside-diphosphate reductase small chain [Arachis duranensis])

HSP 1 Score: 612.5 bits (1578), Expect = 4.4e-172
Identity = 299/329 (90.88%), Postives = 314/329 (95.44%), Query Frame = 1 

Query: 1   MPAIPDEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MPAIP+EPLLA NPDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLS D+RHWESLT  E
Sbjct: 1   MPAIPEEPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSGDIRHWESLTDGE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           +HFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  RHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSIEKNRLFRAIETVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDS EKNRLF AIETVPCVKKKA+WAL+WID +ESFAERI+AFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSSEKNRLFHAIETVPCVKKKAEWALRWIDGSESFAERIVAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKL E+RVK IV +AVDIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLPEERVKGIVKDAVDIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALP ALVGMNGDLMSQYIEFV DRL+ ALG +K+YNVQNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSQYIEFVADRLLVALGCKKVYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGG-HVFKMDEDF 329
           RVGEYQKASVMS+LNG+GG HVFKMDEDF
Sbjct: 301 RVGEYQKASVMSSLNGHGGVHVFKMDEDF 329

[Close]
BLAST of Lsi05G004610 vs. NCBI nr
Match: gi|1021530558|ref|XP_016162231.1| (PREDICTED: ribonucleoside-diphosphate reductase small chain [Arachis ipaensis])

HSP 1 Score: 612.1 bits (1577), Expect = 5.8e-172
Identity = 299/329 (90.88%), Postives = 314/329 (95.44%), Query Frame = 1 

Query: 1   MPAIPDEPLLASNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWESLTSDE 60
           MPAIP+EPLLA NPDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLS DLRHWESLT  E
Sbjct: 1   MPAIPEEPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSGDLRHWESLTDGE 60

Query: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           +HFITHVLAFFAASDGIVLENLAGRFMKEVQV+EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  RHFITHVLAFFAASDGIVLENLAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSIEKNRLFRAIETVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
           IKDS EKNRLF AIETVPCVKKKA+WAL+WID +ESFAERI+AFACVEGIFFSGSFCSIF
Sbjct: 121 IKDSSEKNRLFHAIETVPCVKKKAEWALRWIDGSESFAERIVAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEDRVKEIVTEAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKL E+RVK IV +AVDIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLPEERVKGIVKDAVDIEREFV 240

Query: 241 CDALPVALVGMNGDLMSQYIEFVTDRLVGALGYEKIYNVQNPFDWMELISLQGKTNFFEK 300
           CDALP ALVGMNGDLMSQYIEFV DRL+ ALG +K+YNVQNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSQYIEFVADRLLVALGCKKVYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGEYQKASVMSNLNGNGG-HVFKMDEDF 329
           RVGEYQKASVMS+LNG+GG HVFKMDEDF
Sbjct: 301 RVGEYQKASVMSSLNGHGGVHVFKMDEDF 329

The following BLAST results are available for this feature:
BLAST of Lsi05G004610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RIR2_TOBAC1.1e-16786.63Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum PE=2 SV=1[more]
RIR2C_ARATH6.6e-16082.23Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis thaliana GN=TS... [more]
RI2BL_ARATH2.1e-15880.78Ribonucleoside-diphosphate reductase small chain B OS=Arabidopsis thaliana GN=RN... [more]
RIR2A_ARATH4.8e-14275.62Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis thaliana GN=RN... [more]
RIR2_RAT1.8e-13371.34Ribonucleoside-diphosphate reductase subunit M2 OS=Rattus norvegicus GN=Rrm2 PE=... [more]
BLAST of Lsi05G004610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8R8_CUCSA9.0e-18095.14Ribonucleoside-diphosphate reductase small chain OS=Cucumis sativus GN=Csa_3G597... [more]
A0A0L9U8J2_PHAAN1.2e-17189.06Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g242800 PE=4 SV=1[more]
B9RBH6_RICCO2.0e-17189.97Ribonucleoside-diphosphate reductase small chain, putative OS=Ricinus communis G... [more]
V7D141_PHAVU2.6e-17189.06Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G190100g PE=4 SV=1[more]
A0A067FZP6_CITSI1.0e-17089.36Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040427mg PE=4 SV=1[more]
BLAST of Lsi05G004610 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G27060.13.7e-16182.23 Ferritin/ribonucleotide reductase-like family protein[more]
AT3G23580.12.7e-14375.62 ribonucleotide reductase 2A[more]
BLAST of Lsi05G004610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449455910|ref|XP_004145693.1|1.3e-17995.14PREDICTED: ribonucleoside-diphosphate reductase small chain [Cucumis sativus][more]
gi|659098154|ref|XP_008450003.1|2.2e-17994.83PREDICTED: ribonucleoside-diphosphate reductase small chain [Cucumis melo][more]
gi|1009151915|ref|XP_015893811.1|1.4e-17390.58PREDICTED: ribonucleoside-diphosphate reductase small chain [Ziziphus jujuba][more]
gi|1012193886|ref|XP_015971322.1|4.4e-17290.88PREDICTED: ribonucleoside-diphosphate reductase small chain [Arachis duranensis][more]
gi|1021530558|ref|XP_016162231.1|5.8e-17290.88PREDICTED: ribonucleoside-diphosphate reductase small chain [Arachis ipaensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0009186deoxyribonucleoside diphosphate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR012348RNR-like
IPR009078Ferritin-like_SF
IPR000358RNR_small_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009186 deoxyribonucleoside diphosphate metabolic process
biological_process GO:0009263 deoxyribonucleotide biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006261 DNA-dependent DNA replication
biological_process GO:0006281 DNA repair
biological_process GO:0007275 multicellular organism development
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0012501 programmed cell death
biological_process GO:0051726 regulation of cell cycle
cellular_component GO:0005971 ribonucleoside-diphosphate reductase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G004610.1Lsi05G004610.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000358Ribonucleotide reductase small subunitPANTHERPTHR23409RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAINcoord: 2..328
score: 1.9E
IPR000358Ribonucleotide reductase small subunitPFAMPF00268Ribonuc_red_smcoord: 16..282
score: 9.1E
IPR009078Ferritin-like superfamilyunknownSSF47240Ferritin-likecoord: 5..307
score: 4.79E
IPR012348Ribonucleotide reductase-relatedGENE3DG3DSA:1.10.620.20coord: 6..290
score: 1.3E