Lsi05G004540 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G004540
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Transcription factor MYC2
Location	chr05 : 5809879 .. 5810301 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGGTCATACTAATAAACACCAAATTCATAGCTCGGAAAGTTCATTGAAACATGACATCTTCTTCATTGCTAAGTAAGAGCGCTGAATTTAGGGTTCAATTTCAAGAAATGAGAATAATCCCTCGACAATTGTGGAGGCAGAGAAGCTGCGTGAGAAGTTGAACCATCGATTCAGCTTTCTCCGTTCTGTGGTTCTGAATGTGTCGAGAATGGACAAAGCGTCTCTGTTATTCGACGTCGTTTTGCACATCAATGATTTGCAAATGAAAATTTCAGAGTTGGAATCTCAGGTTCCAAAGAAGAAGAAGAAGAAAAAAGGGTTTGAAGAAATGGAAGAAGAAGCGACTTCGAGAGACCAACGAGAGAGGGTAAATAAAATTTATGTGAAGATTATTGGAGAAGATCAGGCAATGAATTAG

mRNA sequence

ATGACTGAGAAGCTGCGTGAGAAGTTGAACCATCGATTCAGCTTTCTCCGTTCTGTGGTTCTGAATGTGTCGAGAATGGACAAAGCGTCTCTGTTATTCGACGTCGTTTTGCACATCAATGATTTGCAAATGAAAATTTCAGAGTTGGAATCTCAGGTTCCAAAGAAGAAGAAGAAGAAAAAAGGGTTTGAAGAAATGGAAGAAGAAGCGACTTCGAGAGACCAACGAGAGAGGGTAAATAAAATTTATGTGAAGATTATTGGAGAAGATCAGGCAATGAATTAG

Coding sequence (CDS)

ATGACTGAGAAGCTGCGTGAGAAGTTGAACCATCGATTCAGCTTTCTCCGTTCTGTGGTTCTGAATGTGTCGAGAATGGACAAAGCGTCTCTGTTATTCGACGTCGTTTTGCACATCAATGATTTGCAAATGAAAATTTCAGAGTTGGAATCTCAGGTTCCAAAGAAGAAGAAGAAGAAAAAAGGGTTTGAAGAAATGGAAGAAGAAGCGACTTCGAGAGACCAACGAGAGAGGGTAAATAAAATTTATGTGAAGATTATTGGAGAAGATCAGGCAATGAATTAG

Protein sequence

MTEKLREKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPKKKKKKKGFEEMEEEATSRDQRERVNKIYVKIIGEDQAMN

Homology

[Close]

BLAST of Lsi05G004540 vs. Swiss-Prot
Match: BH014_ARATH (Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.2e-07
Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPKKKKKK----- 65
           REKLNHRF  LR++V  VSRMDKASLL D V +I  L+ KI +LE+++ K K  +     
Sbjct: 258 REKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKMKMTETDKLD 317

Query: 66  --------KGFEEMEEEATSRDQRERVNKIYVKIIGED 91
                      E    +  S+  R    ++ VKI+GE+
Sbjct: 318 NSSSNTSPSSVEYQVNQKPSKSNRGSDLEVQVKIVGEE 355

[Close]

BLAST of Lsi05G004540 vs. Swiss-Prot
Match: BH028_ARATH (Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 8.4e-07
Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPKKKKKKKGFEE 65
           REKLNHRF  LR+VV NVS+MDK SLL D V +IN+L+ K   +E +   K   +  F E
Sbjct: 352 REKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELE---KHAIEIQFNE 411

Query: 66  MEEEATSR----------DQRERVNKIYVKIIGEDQAM 94
           ++E A  R          ++   + KI VKI+  D AM
Sbjct: 412 LKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDAM 446

[Close]

BLAST of Lsi05G004540 vs. Swiss-Prot
Match: BH013_ARATH (Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.9e-06
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQ 53
           REKLN RF  LRSVV N+S+MDKASLL D V +IN+L  K+  +E++
Sbjct: 442 REKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAE 488

[Close]

BLAST of Lsi05G004540 vs. Swiss-Prot
Match: MYC2_ARATH (Transcription factor MYC2 OS=Arabidopsis thaliana GN=MYC2 PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 4.1e-06
Identity = 34/68 (50.00%), Postives = 46/68 (67.65%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPKKKKKKKGFEE 65
           REKLN RF  LR+VV NVS+MDKASLL D + +IN+L+ K+ + ES+   K + K   EE
Sbjct: 461 REKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESE---KLQIKNQLEE 520

Query: 66  MEEEATSR 74
           ++ E   R
Sbjct: 521 VKLELAGR 525

[Close]

BLAST of Lsi05G004540 vs. Swiss-Prot
Match: MYC3_ARATH (Transcription factor MYC3 OS=Arabidopsis thaliana GN=MYC3 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 5.4e-06
Identity = 42/99 (42.42%), Postives = 56/99 (56.57%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPKKKKK------ 65
           REKLN RF  LR+VV NVS+MDKASLL D + +IN+L+ K+ + ES   + +KK      
Sbjct: 424 REKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKKLDGMSK 483

Query: 66  ----KKGFEEMEEEATSRDQRERVN----KIYVKIIGED 91
                KG     +E  S +Q    +    +I VKIIG D
Sbjct: 484 EGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWD 522

[Close]

BLAST of Lsi05G004540 vs. TrEMBL
Match: A0A0A0LKN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G080170 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 9.6e-18
Identity = 61/91 (67.03%), Postives = 74/91 (81.32%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPKKKKKKKG--- 65
           REKLN RF+ LRSVV NVSRMDKASLL D V +IN+L+MKISE+ES+V K+KK+KK    
Sbjct: 156 REKLNDRFNSLRSVVPNVSRMDKASLLSDAVSYINELEMKISEMESRVLKEKKEKKNGVD 215

Query: 66  FEEMEEEATSRDQRERVNKIYVKIIGEDQAM 94
             EMEEEA+SRD+RER  +I VKIIG D+A+
Sbjct: 216 ENEMEEEASSRDRRERGIEIDVKIIGGDRAV 246

[Close]

BLAST of Lsi05G004540 vs. TrEMBL
Match: F6I2W7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02820 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 6.2e-09
Identity = 39/56 (69.64%), Postives = 45/56 (80.36%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPKKKKKKK 62
           REKLNHRF  LR+VV NVSRMDKASLL D V +IN+L+ K+ ELESQV K+ KK K
Sbjct: 324 REKLNHRFYALRAVVPNVSRMDKASLLADAVSYINELKAKVDELESQVHKESKKVK 379

[Close]

BLAST of Lsi05G004540 vs. TrEMBL
Match: M5X2D4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004680mg PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-08
Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPKKKKKKK 62
           REKLNHRF  LR+VV NVSRMDKASLL D V +IN+L+ K+ ELESQV ++ KK K
Sbjct: 330 REKLNHRFYALRAVVPNVSRMDKASLLSDAVSYINELKTKVDELESQVQRESKKVK 385

[Close]

BLAST of Lsi05G004540 vs. TrEMBL
Match: A0A0D2P785_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G111800 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-08
Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPKKKKKKK 62
           REKLNHRF  LR+VV NVSRMDKASLL D V +I DL+ KI ELESQ+ +++KK K
Sbjct: 323 REKLNHRFYALRAVVPNVSRMDKASLLSDAVSYITDLKAKIDELESQLQRERKKVK 378

[Close]

BLAST of Lsi05G004540 vs. TrEMBL
Match: K7MER4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G020500 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-08
Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPKKKKKK 61
           REKLNHRF  LR+VV NVSRMDKASLL D V +IN+L+ KI +LESQ P+   KK
Sbjct: 297 REKLNHRFYALRAVVPNVSRMDKASLLSDAVAYINELKAKIEDLESQQPRDSNKK 351

[Close]

BLAST of Lsi05G004540 vs. TAIR10
Match: AT4G00870.1 (AT4G00870.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.2e-08
Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPKKKKKK----- 65
           REKLNHRF  LR++V  VSRMDKASLL D V +I  L+ KI +LE+++ K K  +     
Sbjct: 258 REKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKMKMTETDKLD 317

Query: 66  --------KGFEEMEEEATSRDQRERVNKIYVKIIGED 91
                      E    +  S+  R    ++ VKI+GE+
Sbjct: 318 NSSSNTSPSSVEYQVNQKPSKSNRGSDLEVQVKIVGEE 355

[Close]

BLAST of Lsi05G004540 vs. TAIR10
Match: AT5G46830.1 (AT5G46830.1 NACL-inducible gene 1)

HSP 1 Score: 54.3 bits (129), Expect = 4.7e-08
Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPKKKKKKKGFEE 65
           REKLNHRF  LR+VV NVS+MDK SLL D V +IN+L+ K   +E +   K   +  F E
Sbjct: 352 REKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELE---KHAIEIQFNE 411

Query: 66  MEEEATSR----------DQRERVNKIYVKIIGEDQAM 94
           ++E A  R          ++   + KI VKI+  D AM
Sbjct: 412 LKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDAM 446

[Close]

BLAST of Lsi05G004540 vs. TAIR10
Match: AT1G01260.1 (AT1G01260.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.0e-07
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQ 53
           REKLN RF  LRSVV N+S+MDKASLL D V +IN+L  K+  +E++
Sbjct: 442 REKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAE 488

[Close]

BLAST of Lsi05G004540 vs. TAIR10
Match: AT1G32640.1 (AT1G32640.1 Basic helix-loop-helix (bHLH) DNA-binding family protein)

HSP 1 Score: 52.0 bits (123), Expect = 2.3e-07
Identity = 34/68 (50.00%), Postives = 46/68 (67.65%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPKKKKKKKGFEE 65
           REKLN RF  LR+VV NVS+MDKASLL D + +IN+L+ K+ + ES+   K + K   EE
Sbjct: 461 REKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESE---KLQIKNQLEE 520

Query: 66  MEEEATSR 74
           ++ E   R
Sbjct: 521 VKLELAGR 525

[Close]

BLAST of Lsi05G004540 vs. TAIR10
Match: AT5G46760.1 (AT5G46760.1 Basic helix-loop-helix (bHLH) DNA-binding family protein)

HSP 1 Score: 51.6 bits (122), Expect = 3.1e-07
Identity = 42/99 (42.42%), Postives = 56/99 (56.57%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPKKKKK------ 65
           REKLN RF  LR+VV NVS+MDKASLL D + +IN+L+ K+ + ES   + +KK      
Sbjct: 424 REKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKKLDGMSK 483

Query: 66  ----KKGFEEMEEEATSRDQRERVN----KIYVKIIGED 91
                KG     +E  S +Q    +    +I VKIIG D
Sbjct: 484 EGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWD 522

[Close]

BLAST of Lsi05G004540 vs. NCBI nr
Match: gi|700206198|gb|KGN61317.1| (hypothetical protein Csa_2G080170 [Cucumis sativus])

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-17
Identity = 61/91 (67.03%), Postives = 74/91 (81.32%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPKKKKKKKG--- 65
           REKLN RF+ LRSVV NVSRMDKASLL D V +IN+L+MKISE+ES+V K+KK+KK    
Sbjct: 156 REKLNDRFNSLRSVVPNVSRMDKASLLSDAVSYINELEMKISEMESRVLKEKKEKKNGVD 215

Query: 66  FEEMEEEATSRDQRERVNKIYVKIIGEDQAM 94
             EMEEEA+SRD+RER  +I VKIIG D+A+
Sbjct: 216 ENEMEEEASSRDRRERGIEIDVKIIGGDRAV 246

[Close]

BLAST of Lsi05G004540 vs. NCBI nr
Match: gi|659082631|ref|XP_008441948.1| (PREDICTED: transcription factor MYC4-like [Cucumis melo])

HSP 1 Score: 95.9 bits (237), Expect = 4.0e-17
Identity = 61/89 (68.54%), Postives = 72/89 (80.90%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPKKKKKKKGFE- 65
           REKLN RF+ LR VV NVSRMDKASLL D V +IN+L+MKISE+ES+V KKKKK    E 
Sbjct: 155 REKLNDRFNSLRIVVPNVSRMDKASLLSDAVSYINELEMKISEMESRVSKKKKKNGVDEN 214

Query: 66  EMEEEATSRDQRERVNKIYVKIIGEDQAM 94
           EMEEEA+SRD+RER  +I VKIIG D+A+
Sbjct: 215 EMEEEASSRDRRERGIEIDVKIIGGDRAV 243

[Close]

BLAST of Lsi05G004540 vs. NCBI nr
Match: gi|698543955|ref|XP_009766909.1| (PREDICTED: transcription factor MYC2 [Nicotiana sylvestris])

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-09
Identity = 50/93 (53.76%), Postives = 59/93 (63.44%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQV-----PKKKKKK 65
           REKLNHRF  LRSVV NVSRMDKASLL D V +IN L+ K+ ELESQ+       KK+K 
Sbjct: 282 REKLNHRFYALRSVVPNVSRMDKASLLSDAVSYINQLKTKVDELESQLIDHSNSNKKQKS 341

Query: 66  KGFEEMEEEATSRDQRERVN---KIYVKIIGED 91
               E +   TS DQ  R N   ++ VKI+G D
Sbjct: 342 NESGENQSTNTSVDQELRPNSSSEVEVKIVGPD 374

[Close]

BLAST of Lsi05G004540 vs. NCBI nr
Match: gi|1012181217|ref|XP_015968235.1| (PREDICTED: transcription factor MYC2-like [Arachis duranensis])

HSP 1 Score: 68.6 bits (166), Expect = 6.8e-09
Identity = 52/109 (47.71%), Postives = 66/109 (60.55%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPK--------KK 65
           REKLNHRF  LR+VV NVSRMDKASLL D V +IN+L+ KI ELE+QV K        KK
Sbjct: 312 REKLNHRFYALRAVVPNVSRMDKASLLSDAVSYINELKAKIEELETQVQKESSMNNNNKK 371

Query: 66  KKKKGFEEMEEEAT----SRDQRERVN---------KIYVKIIGEDQAM 94
            K +  + M+ ++T    S DQ    N         ++ VK+IGE+ AM
Sbjct: 372 VKVETGDSMDNQSTTTTSSVDQNNNENEAAEVQVEVEVEVKMIGEEAAM 420

[Close]

BLAST of Lsi05G004540 vs. NCBI nr
Match: gi|1021528093|ref|XP_016207570.1| (PREDICTED: transcription factor MYC2-like [Arachis ipaensis])

HSP 1 Score: 68.6 bits (166), Expect = 6.8e-09
Identity = 52/109 (47.71%), Postives = 66/109 (60.55%), Query Frame = 1


Query: 6   REKLNHRFSFLRSVVLNVSRMDKASLLFDVVLHINDLQMKISELESQVPK--------KK 65
           REKLNHRF  LR+VV NVSRMDKASLL D V +IN+L+ KI ELE+QV K        KK
Sbjct: 311 REKLNHRFYALRAVVPNVSRMDKASLLSDAVSYINELKAKIEELETQVQKESSINNNNKK 370

Query: 66  KKKKGFEEMEEEAT----SRDQRERVN---------KIYVKIIGEDQAM 94
            K +  + M+ ++T    S DQ    N         ++ VK+IGE+ AM
Sbjct: 371 VKVETGDSMDNQSTTTTSSVDQNNNENEAAEVQVEVEVEVKMIGEEAAM 419

The following BLAST results are available for this feature:

BLAST of Lsi05G004540 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH014_ARATH	2.2e-07	39.80	Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2 SV=1	[more]
BH028_ARATH	8.4e-07	42.86	Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2 SV=1	[more]
BH013_ARATH	1.9e-06	59.57	Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2 SV=1	[more]
MYC2_ARATH	4.1e-06	50.00	Transcription factor MYC2 OS=Arabidopsis thaliana GN=MYC2 PE=1 SV=2	[more]
MYC3_ARATH	5.4e-06	42.42	Transcription factor MYC3 OS=Arabidopsis thaliana GN=MYC3 PE=1 SV=1	[more]

BLAST of Lsi05G004540 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKN8_CUCSA	9.6e-18	67.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G080170 PE=4 SV=1	[more]
F6I2W7_VITVI	6.2e-09	69.64	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02820 PE=4 SV=...	[more]
M5X2D4_PRUPE	1.1e-08	67.86	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004680mg PE=4 SV=1	[more]
A0A0D2P785_GOSRA	1.8e-08	67.86	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G111800 PE=4 SV=1	[more]
K7MER4_SOYBN	1.8e-08	67.27	Uncharacterized protein OS=Glycine max GN=GLYMA_16G020500 PE=4 SV=1	[more]

BLAST of Lsi05G004540 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00870.1	1.2e-08	39.80	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G46830.1	4.7e-08	42.86	NACL-inducible gene 1	[more]
AT1G01260.1	1.0e-07	59.57	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G32640.1	2.3e-07	50.00	Basic helix-loop-helix (bHLH) DNA-binding family protein	[more]
AT5G46760.1	3.1e-07	42.42	Basic helix-loop-helix (bHLH) DNA-binding family protein	[more]

BLAST of Lsi05G004540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700206198\|gb\|KGN61317.1\|	1.4e-17	67.03	hypothetical protein Csa_2G080170 [Cucumis sativus]	[more]
gi\|659082631\|ref\|XP_008441948.1\|	4.0e-17	68.54	PREDICTED: transcription factor MYC4-like [Cucumis melo]	[more]
gi\|698543955\|ref\|XP_009766909.1\|	1.4e-09	53.76	PREDICTED: transcription factor MYC2 [Nicotiana sylvestris]	[more]
gi\|1012181217\|ref\|XP_015968235.1\|	6.8e-09	47.71	PREDICTED: transcription factor MYC2-like [Arachis duranensis]	[more]
gi\|1021528093\|ref\|XP_016207570.1\|	6.8e-09	47.71	PREDICTED: transcription factor MYC2-like [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G004540.1	Lsi05G004540.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 6..59 score: 5.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 1..42 score: 10
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 6..55 score: 4.4
None	No IPR available	unknown	Coil	Coil	coord: 39..59 scor
None	No IPR available	PANTHER	PTHR11514	MYC	coord: 6..93 score: 1.5
None	No IPR available	PANTHER	PTHR11514:SF40	TRANSCRIPTION FACTOR BHLH14	coord: 6..93 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G004540	Melon (DHL92) v3.6.1	lsimedB389
Lsi05G004540	Melon (DHL92) v3.6.1	lsimedB402
Lsi05G004540	Silver-seed gourd	carlsiB333
Lsi05G004540	Silver-seed gourd	carlsiB395
Lsi05G004540	Cucumber (Chinese Long) v3	cuclsiB233
Lsi05G004540	Watermelon (97103) v2	lsiwmbB329
Lsi05G004540	Wax gourd	lsiwgoB436
Lsi05G004540	Cucumber (Gy14) v1	cgylsiB248
Lsi05G004540	Cucurbita maxima (Rimu)	cmalsiB126
Lsi05G004540	Cucurbita maxima (Rimu)	cmalsiB249
Lsi05G004540	Cucurbita moschata (Rifu)	cmolsiB115
Lsi05G004540	Cucurbita moschata (Rifu)	cmolsiB237
Lsi05G004540	Cucurbita pepo (Zucchini)	cpelsiB511
Lsi05G004540	Cucurbita pepo (Zucchini)	cpelsiB553
Lsi05G004540	Wild cucumber (PI 183967)	cpilsiB212
Lsi05G004540	Cucumber (Chinese Long) v2	culsiB214
Lsi05G004540	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G004540	Melon (DHL92) v3.5.1	lsimeB383
Lsi05G004540	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G004540	Watermelon (97103) v1	lsiwmB368
Lsi05G004540	Cucumber (Gy14) v2	cgyblsiB201