Lsi05G004440 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G004440
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionProtein TSSC4
Locationchr05 : 5707504 .. 5709821 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTCCTTTTCCATGTCTATTTGTTCGAAATCGAAACAGCCCTAAATTCACCATTCATAACCCCATCGCCGAGCATGGACGACAGTTTCAAAGTTCGTGTCGACAGAATCTTTGGCTCTCTCTCTTCCTCATCTACTTCTTCATCCCCAGCTTTCAATTCATCTCTCACTTCTCTATGGTGCCTTACGGATGATGATATCGAGAGGAAAGAGTGGATCAAGGGGAAGGACGAGGAACAACCCGAACCGGAGCTCGAATCCACCTCCTTCTTCGATGGCCGAAGGAAGGTGACCGACAGGAATTCATTTGGATTCGGAGACGATTTCGAGGATGACGTCGATGATTTGGACGAAAATCCAGGGTCGAATGGCTCGTCTAGTAAGTTCCCTAAACCTGATGATTATGGAGATGAAGAATGGGAAATCAAGTCCTCCATTGGCCGGGACTGCACGCTTGATTATGAGGTACATCTCTAGCTCTCTCTGGCTTTTTGCCCGATGTTCATTAAGAACTGTTCTGATTAATCTATGCTTAGTTTTTCCTGCTTTATGATTTGGGAAATGAGTTGGTAAGGCTGTTTTAAGTGCAGGCTTGACGATAAACAAAACTGAGAAATTAGGTATTTCGAATTTAAGCTATCTACATAACATAGTGTTTGAAATTTAATTCTATGTCGTGTGGTAAGGCTTAGCATGTTATGGAAGTTTGTCTCCAGAGCTCTCGTATGGGGTTTATGGTTGGAAAGGAACAAGAAGATTACTGAAGATCAGGCTACTGTTTTCTCTACTTTTTGGGCTTCTGTACAACTAAATGCATGTTAGTGGTGCAATAGCTACAGAAAATTCTATTGTAATTACCCTCTCCTTGATCCTTGTGTGATTATATACTGCATATTGTTGGTTCATTGTGGAATATGGAGAATCATTTGGGTTGTATCAGTCTATGTCCCCAATTTGATTAGTAGATTGCCTTCTGAAATGTATAATGTATTGATGTGTGACTGTGCAGGAAGAGGAAGATGAGTATGATAAAGTTGCTGTTGGCAAGGAGAAAGGTGGAGATCGGTTGTATATGAAAGACATAACTGACTGTGGTATTGAGATAAGTTCGTGCACTGAGCTTCCTACTTCGACAAGGAATTTCACCAGAGATCCACGCGCCAATCACTTAGCTGCAAAAGTTAGACTCAAGGAAGATGCAGAAGCTTCCAAGACAATTGATTTGTTGCACGTCTCTGAGAACAGTGCAGTAGCCATCACTGGTTCTGAATGCAATGCTTTTCAAAACCCAAAATCTATTCTGAAGAGGAAAGACAATAATCTAGATGCAAAATCACACAAGCGTGTCCGATTTGACCCTGAATGTAAAATTTCTCAAGAGTCTCTAGGATCTAAAGATTTCGCTATGGAAGCAAACTCTTTGCCTGGAGCTGGAGCTGCAGAGGTCGGCAATGAACCCACCTTCCGATCTCAGACCACTCAAGTCCCGGACTACTTACAAAATCCATCAAGATACACGCATTATACTTTTGACTCATCCAATGAGGTAGATGAAGAGTCCAACAAGAAAGCCTATATGAATTTCCTCCAGCTGGTGAGAGAATCAAAGACAATGGAGTCACATCAGGATGATGATTCAACTGGTCCTCCAAAATCCATCACCTTCATCCCAAAAAAGAAAGCAGGTGATACAATAATGCTTGAAAATTCTCCCCTGCAGTATGGAGTTGGGAAGGAGCTTGTGCACCAGAGAGGCATGTCCATCGGCATTGCAGCCGTGGACACTCCGACAGATGATGTTTGTTCAATGGAAGAAGACGAGCCTGATAAATTAGAAATTAGAAGAAACAGCTCACAGAAACCAGGCCGCCAGTACAGAATGAGAGCTAGTACGATGGAGTCAGAGGAGGAGGCCTGAAGCCTGATTGATATAGCAAGACACTGCTTTTAAACCATACCTTTCTCCATGGTCTTGTTTGTGTTGAACTATTCTTGATGGTTTTTAAGGCACCTTATTTGATGTACGATATTTTCAGGACATTGCAACAGTTCTCGACAGCCCATGTGGAATCGGGCGAGATACTGATTGCATCTTAAGTGATCCATTTCTACCTAACAATTTACTTGACCCTACAACATTTAAGCGTAAAAAAAAAAAAAAAGCATAAAGCTACAATCTATGTAGCTATGACTTTACCTTTGATTTTTGGTTCTTGGCATACCCAAAATGGGCTTCAGGAAGCAGTCTCCATTCTTTGCATGATCTATTAACTTCAAAAATCATAATTCAAAATTTGGGCGGTAAGGCTTTTAATTTTT

mRNA sequence

ATTTCCTTTTCCATGTCTATTTGTTCGAAATCGAAACAGCCCTAAATTCACCATTCATAACCCCATCGCCGAGCATGGACGACAGTTTCAAAGTTCGTGTCGACAGAATCTTTGGCTCTCTCTCTTCCTCATCTACTTCTTCATCCCCAGCTTTCAATTCATCTCTCACTTCTCTATGGTGCCTTACGGATGATGATATCGAGAGGAAAGAGTGGATCAAGGGGAAGGACGAGGAACAACCCGAACCGGAGCTCGAATCCACCTCCTTCTTCGATGGCCGAAGGAAGGTGACCGACAGGAATTCATTTGGATTCGGAGACGATTTCGAGGATGACGTCGATGATTTGGACGAAAATCCAGGGTCGAATGGCTCGTCTAGTAAGTTCCCTAAACCTGATGATTATGGAGATGAAGAATGGGAAATCAAGTCCTCCATTGGCCGGGACTGCACGCTTGATTATGAGGAAGAGGAAGATGAGTATGATAAAGTTGCTGTTGGCAAGGAGAAAGGTGGAGATCGGTTGTATATGAAAGACATAACTGACTGTGGTATTGAGATAAGTTCGTGCACTGAGCTTCCTACTTCGACAAGGAATTTCACCAGAGATCCACGCGCCAATCACTTAGCTGCAAAAGTTAGACTCAAGGAAGATGCAGAAGCTTCCAAGACAATTGATTTGTTGCACGTCTCTGAGAACAGTGCAGTAGCCATCACTGGTTCTGAATGCAATGCTTTTCAAAACCCAAAATCTATTCTGAAGAGGAAAGACAATAATCTAGATGCAAAATCACACAAGCGTGTCCGATTTGACCCTGAATGTAAAATTTCTCAAGAGTCTCTAGGATCTAAAGATTTCGCTATGGAAGCAAACTCTTTGCCTGGAGCTGGAGCTGCAGAGGTCGGCAATGAACCCACCTTCCGATCTCAGACCACTCAAGTCCCGGACTACTTACAAAATCCATCAAGATACACGCATTATACTTTTGACTCATCCAATGAGGTAGATGAAGAGTCCAACAAGAAAGCCTATATGAATTTCCTCCAGCTGGTGAGAGAATCAAAGACAATGGAGTCACATCAGGATGATGATTCAACTGGTCCTCCAAAATCCATCACCTTCATCCCAAAAAAGAAAGCAGGTGATACAATAATGCTTGAAAATTCTCCCCTGCAGTATGGAGTTGGGAAGGAGCTTGTGCACCAGAGAGGCATGTCCATCGGCATTGCAGCCGTGGACACTCCGACAGATGATGTTTGTTCAATGGAAGAAGACGAGCCTGATAAATTAGAAATTAGAAGAAACAGCTCACAGAAACCAGGCCGCCAGTACAGAATGAGAGCTAGTACGATGGAGTCAGAGGAGGAGGCCTGAAGCCTGATTGATATAGCAAGACACTGCTTTTAAACCATACCTTTCTCCATGGTCTTGTTTGTGTTGAACTATTCTTGATGGTTTTTAAGGCACCTTATTTGATGTACGATATTTTCAGGACATTGCAACAGTTCTCGACAGCCCATGTGGAATCGGGCGAGATACTGATTGCATCTTAAGTGATCCATTTCTACCTAACAATTTACTTGACCCTACAACATTTAAGCGTAAAAAAAAAAAAAAAGCATAAAGCTACAATCTATGTAGCTATGACTTTACCTTTGATTTTTGGTTCTTGGCATACCCAAAATGGGCTTCAGGAAGCAGTCTCCATTCTTTGCATGATCTATTAACTTCAAAAATCATAATTCAAAATTTGGGCGGTAAGGCTTTTAATTTTT

Coding sequence (CDS)

ATGGACGACAGTTTCAAAGTTCGTGTCGACAGAATCTTTGGCTCTCTCTCTTCCTCATCTACTTCTTCATCCCCAGCTTTCAATTCATCTCTCACTTCTCTATGGTGCCTTACGGATGATGATATCGAGAGGAAAGAGTGGATCAAGGGGAAGGACGAGGAACAACCCGAACCGGAGCTCGAATCCACCTCCTTCTTCGATGGCCGAAGGAAGGTGACCGACAGGAATTCATTTGGATTCGGAGACGATTTCGAGGATGACGTCGATGATTTGGACGAAAATCCAGGGTCGAATGGCTCGTCTAGTAAGTTCCCTAAACCTGATGATTATGGAGATGAAGAATGGGAAATCAAGTCCTCCATTGGCCGGGACTGCACGCTTGATTATGAGGAAGAGGAAGATGAGTATGATAAAGTTGCTGTTGGCAAGGAGAAAGGTGGAGATCGGTTGTATATGAAAGACATAACTGACTGTGGTATTGAGATAAGTTCGTGCACTGAGCTTCCTACTTCGACAAGGAATTTCACCAGAGATCCACGCGCCAATCACTTAGCTGCAAAAGTTAGACTCAAGGAAGATGCAGAAGCTTCCAAGACAATTGATTTGTTGCACGTCTCTGAGAACAGTGCAGTAGCCATCACTGGTTCTGAATGCAATGCTTTTCAAAACCCAAAATCTATTCTGAAGAGGAAAGACAATAATCTAGATGCAAAATCACACAAGCGTGTCCGATTTGACCCTGAATGTAAAATTTCTCAAGAGTCTCTAGGATCTAAAGATTTCGCTATGGAAGCAAACTCTTTGCCTGGAGCTGGAGCTGCAGAGGTCGGCAATGAACCCACCTTCCGATCTCAGACCACTCAAGTCCCGGACTACTTACAAAATCCATCAAGATACACGCATTATACTTTTGACTCATCCAATGAGGTAGATGAAGAGTCCAACAAGAAAGCCTATATGAATTTCCTCCAGCTGGTGAGAGAATCAAAGACAATGGAGTCACATCAGGATGATGATTCAACTGGTCCTCCAAAATCCATCACCTTCATCCCAAAAAAGAAAGCAGGTGATACAATAATGCTTGAAAATTCTCCCCTGCAGTATGGAGTTGGGAAGGAGCTTGTGCACCAGAGAGGCATGTCCATCGGCATTGCAGCCGTGGACACTCCGACAGATGATGTTTGTTCAATGGAAGAAGACGAGCCTGATAAATTAGAAATTAGAAGAAACAGCTCACAGAAACCAGGCCGCCAGTACAGAATGAGAGCTAGTACGATGGAGTCAGAGGAGGAGGCCTGA

Protein sequence

MDDSFKVRVDRIFGSLSSSSTSSSPAFNSSLTSLWCLTDDDIERKEWIKGKDEEQPEPELESTSFFDGRRKVTDRNSFGFGDDFEDDVDDLDENPGSNGSSSKFPKPDDYGDEEWEIKSSIGRDCTLDYEEEEDEYDKVAVGKEKGGDRLYMKDITDCGIEISSCTELPTSTRNFTRDPRANHLAAKVRLKEDAEASKTIDLLHVSENSAVAITGSECNAFQNPKSILKRKDNNLDAKSHKRVRFDPECKISQESLGSKDFAMEANSLPGAGAAEVGNEPTFRSQTTQVPDYLQNPSRYTHYTFDSSNEVDEESNKKAYMNFLQLVRESKTMESHQDDDSTGPPKSITFIPKKKAGDTIMLENSPLQYGVGKELVHQRGMSIGIAAVDTPTDDVCSMEEDEPDKLEIRRNSSQKPGRQYRMRASTMESEEEA
Homology
[Close]
BLAST of Lsi05G004440 vs. TrEMBL
Match: A0A0A0LDS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G599460 PE=4 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 9.6e-198
Identity = 367/436 (84.17%), Postives = 390/436 (89.45%), Query Frame = 1 

Query: 1   MDDSFKVRVDRIFGSLSSSST---SSSPAFNSSLTSLWCLTDDDIERKEWIKGKDEEQP- 60
           MDDSFKVRVDRIFGSLSSSST   SSS  FNSSL+SLW LTDD+IER+EWIKGK+EEQP 
Sbjct: 1   MDDSFKVRVDRIFGSLSSSSTTSSSSSSPFNSSLSSLWSLTDDEIERREWIKGKEEEQPP 60

Query: 61  EPELESTSFFDGRRKVTDRNSFGFGDDFEDDVDDLDENPGSNGSSSKFPKPDDYGDEEWE 120
           E +L  TSFFDG RKV +RNSFGF DDFEDD+DD+DENP SNGSSSKFPKPDDYGDEEWE
Sbjct: 61  ESDLAPTSFFDGLRKVNERNSFGFRDDFEDDLDDVDENPESNGSSSKFPKPDDYGDEEWE 120

Query: 121 IKSSIGRDCTLDYEEEEDEYDKVAVGKEKGGDRLYMKDITDCGIEISSCTELPTSTRNFT 180
           IKSSIGRDCTLDYEEEEDEYDKVAVG+EK GDRLYMK+I+DCGIEI S TELPTS RNFT
Sbjct: 121 IKSSIGRDCTLDYEEEEDEYDKVAVGREKNGDRLYMKEISDCGIEIGSSTELPTSIRNFT 180

Query: 181 RDPRANHLAAKVRLKEDAEASKTIDLLHVSENSAVAITGSECNAFQNPKSILKRKDNNLD 240
           RDPRANHLAAKVRLKEDAEASKTI LLHVSENSAVAIT SE N  QNPKSILKRKDN+LD
Sbjct: 181 RDPRANHLAAKVRLKEDAEASKTIHLLHVSENSAVAITDSESNTSQNPKSILKRKDNHLD 240

Query: 241 AKSHKRVRFDPECKISQESLGSKDFAMEANSLPGAGAAEVGNEPTFRSQTTQVPDYLQNP 300
           AK HKRVRFDPECKI+Q S GSKDF  E NSLP  GAAEVGNE TF S+ TQVPDYLQNP
Sbjct: 241 AKLHKRVRFDPECKITQISQGSKDFVTETNSLP--GAAEVGNEVTFPSRATQVPDYLQNP 300

Query: 301 SRYTHYTFDSSNEVDEESNKKAYMNFLQLVRESKTMESHQDDDSTGPPKSITFIPKKKAG 360
           SRYTHYTFDSSN+VDEESNKKAYMNFLQLVRESK +ESH++D  TGPPKSITFIPKKKA 
Sbjct: 301 SRYTHYTFDSSNDVDEESNKKAYMNFLQLVRESKRIESHENDAPTGPPKSITFIPKKKAD 360

Query: 361 DTIMLENSPLQYGVGKELVHQRGMSIGIAAVDTPTDDVCSMEEDEPDKLEIRRNSSQKPG 420
           DTIMLENSP Q GVGKE+VHQRGMSIGIA VD  TDDVCSMEEDEPDKLE + NSSQKPG
Sbjct: 361 DTIMLENSPRQNGVGKEVVHQRGMSIGIATVDDQTDDVCSMEEDEPDKLETKTNSSQKPG 420

Query: 421 RQYRMRASTMESEEEA 433
           R+YR+RA+ MESEEEA
Sbjct: 421 RRYRIRANNMESEEEA 434

[Close]
BLAST of Lsi05G004440 vs. TrEMBL
Match: F6H429_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g01100 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.5e-102
Identity = 228/448 (50.89%), Postives = 308/448 (68.75%), Query Frame = 1 

Query: 1   MDDSFKVRVDRIFGSLSSSSTSS-SPAFNSSLTSLWCLTDDDIERKEWIKGKDEEQPEPE 60
           M+DSF+VRVDRIFGSL+SSS+SS SP  N  L+SLW LTDD++E++EW + KD   PE E
Sbjct: 1   MEDSFRVRVDRIFGSLASSSSSSLSPCAN--LSSLWSLTDDEVEKREWNREKDI--PETE 60

Query: 61  LESTSFFDGRRKVTDRNSFGFGDDFEDDVDDLDENPGSN-----GSSSKFPKPDDYGDEE 120
           + S S          R+S GFG   E D++DLD++         GSSS+  KPDDY  EE
Sbjct: 61  VTSYSSNLDGLFAKKRSSVGFGKQLEQDLEDLDDDDLEGETRVRGSSSRPVKPDDYNHEE 120

Query: 121 WEIKSSIGRDCTLDYEEEEDEYDKVAVGKEKGGDRLYMKDITDCGIEISSCTELPTSTRN 180
           WEI+SSIG DC LD EEEEDEYDKVAVG+EK G+RLYM D  D  IE+ SC  +P S ++
Sbjct: 121 WEIRSSIGLDCALDNEEEEDEYDKVAVGREKAGERLYMTDFNDYAIELDSCNVIPESFKD 180

Query: 181 FTRDPRANHLAAKVRLKEDAEASKTIDLLHVSENSAVAITGSECNAFQ---NPKSILKRK 240
             RDPRANH+AAK+RL+EDAEA+ + D L VS+ +  A   ++ N  +   N KSILKRK
Sbjct: 181 VARDPRANHMAAKIRLQEDAEAAGSFDSLRVSDKTLPAAAATQINTSEDGANLKSILKRK 240

Query: 241 DNNLDAKSHKRVRFDPECKI---SQESLGSKDFAMEANSLPGAGAAEVGNEPTFRSQ-TT 300
           +N LD+K HKRVRFDP CK     +ES  +K+  ME  S+     A V  + +F  Q  +
Sbjct: 241 ENQLDSKLHKRVRFDPGCKTDSKEEESERTKNLTMETCSME---EATVSEKVSFTPQDPS 300

Query: 301 QVPDYLQNPSRYTHYTFDSSNEVDEESNKKAYMNFLQLVRESKTMESHQDDDSTGPPKSI 360
            VPDY++NP++YTHYTFDSS+++DEESN+ AYM+FL ++++   +ES Q D +   PK++
Sbjct: 301 GVPDYIRNPTKYTHYTFDSSSDIDEESNRCAYMDFLNMLKKPDALES-QADKAFDLPKAV 360

Query: 361 TFIPKKKAGDTIMLENS----PLQYGVGKELVHQRGMSIGIAAVDTPTDDVCSMEEDEPD 420
           TF P+KK+ DT M+++S      Q  VGKE +H++G+ +GIAA D    +VC+M+EDEP+
Sbjct: 361 TFTPRKKSADTYMMKHSSEFPQKQEDVGKEFMHRKGLPLGIAAEDCQETEVCAMDEDEPE 420

Query: 421 KLEIRRNSS-QKPGRQYRMRASTMESEE 431
            +  + ++S QKPGRQYR +AS+ E EE
Sbjct: 421 PVASKISTSLQKPGRQYRTKASS-ELEE 439

[Close]
BLAST of Lsi05G004440 vs. TrEMBL
Match: A0A0B0PXY2_GOSAR (Protein TSSC4 OS=Gossypium arboreum GN=F383_10076 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 2.3e-98
Identity = 225/447 (50.34%), Postives = 293/447 (65.55%), Query Frame = 1 

Query: 1   MDDSFKVRVDRIFGSLSSSSTSSSPAFNSSLTSLWCLTDDDIERKEWIKGKDEEQPEPEL 60
           M+DSF  RV ++FGSLSSSS+SSS + +  L+SLW LTDD+IE++EW + K+  Q + E 
Sbjct: 1   MEDSFNARVGKVFGSLSSSSSSSSNSKSLPLSSLWSLTDDEIEKREWNRDKNSPQQQDED 60

Query: 61  ESTSFFDGRRKVTDRNSFGFGDDFEDDVDDLD----ENPGSNGSSSKFPKPDDYGDEEWE 120
           E       ++K     +  FG + E+D+DDLD    E   ++ SSSK  KP+DY DEEWE
Sbjct: 61  EGFVHNFSQKK----KAINFGAELENDLDDLDDEDAEEEEASASSSKPAKPEDYNDEEWE 120

Query: 121 IKSSIGRDCTLDYEEEEDEYDKVAVGKEKGGDRLYMKDITDCGIEISSCTELPTSTRNFT 180
           IKSSIGRDCTLDYEEEED YDKVAVG++K GDRLYMKD+ D  I+  SC  +PT+ ++F+
Sbjct: 121 IKSSIGRDCTLDYEEEEDAYDKVAVGRDKNGDRLYMKDVNDYDIDADSCNTIPTTFKDFS 180

Query: 181 RDPRANHLAAKV-----------RLKEDAEASKTIDLLHVSENSAVAITGSECNAFQ--N 240
           RDPRANH+AAK+           RL+EDAEA+K ID LHVS++ A     +  + F+  N
Sbjct: 181 RDPRANHIAAKLRLMEDEEATKRRLEEDAEAAKKIDSLHVSDSDATVGVDAHSSTFEDGN 240

Query: 241 PKSILKRKDNNLDAKSHKRVRFDPECKISQESLG---SKDFAMEANSLPGAGAAEVGNEP 300
           PKSILKRKD   ++KS KRVRFD EC  +  S G   +KD   E   L     A V NE 
Sbjct: 241 PKSILKRKDAESNSKSQKRVRFDSECCKNDCSEGPERTKDVQGEV-CLTEEEDAMVSNEV 300

Query: 301 TFRSQTTQVPDYLQNPSRYTHYTFDSSNEVDEESNKKAYMNFLQLVRESKTMESHQDDDS 360
           +     + +PDY++NPS+YT YTFD+S +VD+ESN+ AYM+FL+LVR S   E   DD  
Sbjct: 301 S--DYPSGIPDYMRNPSKYTRYTFDTS-DVDDESNRLAYMDFLRLVRRSDGTEPQADDGP 360

Query: 361 TGPPKSITFIPKKKAGDTIM----LENSPLQYGVGKELVHQRGMSIGIAAVDTPTDDVCS 420
               K +TFIP+KK GD IM     E+     G  K+ +H+RG+ IGIAA DT  D VC+
Sbjct: 361 GDLTKPVTFIPRKKIGDVIMGESGSESKQTGEGADKKPMHRRGLQIGIAAGDT-DDGVCA 420

Query: 421 MEEDEPDKLEIRRNSSQKPGRQYRMRA 424
           M+EDEP      RN SQ+ GRQYRM++
Sbjct: 421 MDEDEPQTSIDNRNISQRSGRQYRMKS 438

[Close]
BLAST of Lsi05G004440 vs. TrEMBL
Match: A0A059ATJ9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02446 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 8.7e-98
Identity = 224/460 (48.70%), Postives = 300/460 (65.22%), Query Frame = 1 

Query: 1   MDDSFKVRVDRIFGSLSSSSTSSSPAF--------------NSSLTSLWCLTDDDIERKE 60
           M+DSFKVRVDR+FGSLSSSS+SSS A                SS +SLWCLTD ++ERKE
Sbjct: 1   MEDSFKVRVDRLFGSLSSSSSSSSSASVASAAAAQPSSSAAASSFSSLWCLTDGEVERKE 60

Query: 61  WIKGKDEEQPEPELE------STSFFDGRRKVTDRNSFGFGDDFEDDVDDLDENPGSNG- 120
           W   +D   PEPE +            GRR         F +D E D+++LD+  G  G 
Sbjct: 61  W--NRDRGSPEPEFDLGPRPTRGGGGGGRRGEAGWGRGDFREDLERDLEELDDCNGDEGD 120

Query: 121 ------SSSKFPKPDDYGDEEWEIKSSIGRDCTLDYEEEEDEYDKVAVGKEKGGDRLYMK 180
                 SS +  KPDDY DEEWEIKSSIGRDCTLDYEEEED YDK+AVG+EK GDRLYMK
Sbjct: 121 EEEGLRSSGQSDKPDDYNDEEWEIKSSIGRDCTLDYEEEEDRYDKLAVGREKAGDRLYMK 180

Query: 181 DITDCGIEISSCTELPTSTRNFTRDPRANHLAAKVRLKEDAEASKTIDLLHVSENSAVAI 240
           DIT+ GI I   +ELPT+  + +RDPRA+H+AAK+RLKEDAEA++ ID LHVSE +A ++
Sbjct: 181 DITNYGISIDHDSELPTTFSDVSRDPRADHMAAKIRLKEDAEAAEKIDSLHVSEENAHSV 240

Query: 241 TGSECNAFQ---NPKSILKRKDNNLDAKSHKRVRFDPECKISQESLGSKDFAMEANSLPG 300
             S+ +  +   N KSILKRKD   D+K+ KRVRFDPE  I + S  ++   M+ +    
Sbjct: 241 ANSQVHTSEVDVNLKSILKRKDGQSDSKTQKRVRFDPE-SIEEASSEAELVPMDPSGTE- 300

Query: 301 AGAAEVGNEPTFRSQTTQVPDYLQNPSRYTHYTFDSSNEVDEESNKKAYMNFLQLVRESK 360
           +  +E G     +  ++ VPDYL+NPSRYTHYTFDSS ++DE+SN++AYM+FL +V++SK
Sbjct: 301 SSISENGVIRPSQDFSSAVPDYLRNPSRYTHYTFDSSTDMDEQSNRQAYMDFLNMVKKSK 360

Query: 361 TMESHQDDDSTGPPKSITFIPKKKAGDTIMLENSPLQY---GVGKELVHQRGMSIGIAAV 420
           + +   DD     PKS+TFIP+K+ G TI+   + L+       K+ V ++   + IAAV
Sbjct: 361 SSDECPDDSPVDLPKSVTFIPRKR-GSTILDNGAELKLDNEDASKDAVRRKVAPV-IAAV 420

Query: 421 DTPTDDVCSMEEDEPDKLEIRRNSSQKPGRQYRMRASTME 428
           D    +VC+MEEDE ++   +++S  + GRQYR++A T E
Sbjct: 421 DAQDSEVCAMEEDEVEEAVDQKHSLVRSGRQYRIKAGTEE 454

[Close]
BLAST of Lsi05G004440 vs. TrEMBL
Match: A0A0D2QWU6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G276100 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 2.5e-97
Identity = 226/449 (50.33%), Postives = 292/449 (65.03%), Query Frame = 1 

Query: 1   MDDSFKVRVDRIFGSLSSSSTSSSPAFNSSL--TSLWCLTDDDIERKEWIKGKDEEQPEP 60
           M DSF  RV ++FGSL++SS+SSS + + SL  +SLW LTDD+IE++EW + K+  Q + 
Sbjct: 1   MGDSFNARVGKVFGSLTASSSSSSSSNSKSLPLSSLWSLTDDEIEKREWNRDKNSPQQQD 60

Query: 61  ELESTSFFDGRRKVTDRNSFGFGDDFEDDVDDLD----ENPGSNGSSSKFPKPDDYGDEE 120
           E E       + K   + +  FG + E D+DDLD    E   ++ SSSK  KP+DY DEE
Sbjct: 61  EDEGFLHNFSQNK---KKAINFGAELEKDLDDLDDEDAEEEEASASSSKPSKPEDYNDEE 120

Query: 121 WEIKSSIGRDCTLDYEEEEDEYDKVAVGKEKGGDRLYMKDITDCGIEISSCTELPTSTRN 180
           WEIKSSIGRDCTLDYEEEED YDKVAVG++K GDRLYMKD+ D  I+  SC  LPT+ ++
Sbjct: 121 WEIKSSIGRDCTLDYEEEEDAYDKVAVGRDKNGDRLYMKDVNDYDIDADSCNTLPTTFKD 180

Query: 181 FTRDPRANHLAAKV-----------RLKEDAEASKTIDLLHVSENSAVAITGSECNAFQ- 240
           F+RDPRANH+AAK+           RL+EDAEA+K ID LHVS++ A     +  + F+ 
Sbjct: 181 FSRDPRANHIAAKLRLMEDEEATKRRLEEDAEAAKKIDSLHVSDSDAAVGVEAHISTFED 240

Query: 241 -NPKSILKRKDNNLDAKSHKRVRFDPECKISQESLG---SKDFAMEANSLPGAGAAEVGN 300
            NPKSILKRKD   ++KS KRVRFD EC  +  S G   +KD   E   L     A V  
Sbjct: 241 GNPKSILKRKDAESNSKSQKRVRFDSECCKNDCSEGPERTKDVQGEV-CLTEEEDAMVSK 300

Query: 301 EPTFRSQTTQVPDYLQNPSRYTHYTFDSSNEVDEESNKKAYMNFLQLVRESKTMESHQDD 360
           E +     + +PDY+QNPS+YT YTFD+S EVD+ESN+ AYM+FL+LVR S   E   DD
Sbjct: 301 EVS--DYPSGIPDYMQNPSKYTRYTFDTS-EVDDESNRLAYMDFLRLVRRSDGTEPQADD 360

Query: 361 DSTGPPKSITFIPKKKAGDTIM----LENSPLQYGVGKELVHQRGMSIGIAAVDTPTDDV 420
                 K +TFIP+KK GD IM    +E+     G  K+ +H+RG+ IGIAA DT  D V
Sbjct: 361 GPGDLTKPVTFIPRKKIGDVIMGESGIESKQTGEGADKKPMHRRGLQIGIAAGDT-DDGV 420

Query: 421 CSMEEDEPDKLEIRRNSSQKPGRQYRMRA 424
           C+M+EDEP      RN SQ+ GRQYRM++
Sbjct: 421 CAMDEDEPQTSIDNRNISQRSGRQYRMKS 441

[Close]
BLAST of Lsi05G004440 vs. TAIR10
Match: AT5G13970.1 (AT5G13970.1 unknown protein)

HSP 1 Score: 226.1 bits (575), Expect = 4.2e-59
Identity = 186/463 (40.17%), Postives = 251/463 (54.21%), Query Frame = 1 

Query: 1   MDDSFKVRVDRIFGSLSSSSTSSSPAFNSSLTSLWCLTDDDIERKEWIKGKDEEQPEPEL 60
           MD+SF+VR+D++FGSL+SSSTSS+P     ++SLWCL +D+I+        ++   E EL
Sbjct: 1   MDESFRVRIDKVFGSLASSSTSSAP-----VSSLWCLAEDEIDG-------NQRSGEKEL 60

Query: 61  ESTSFFDGRRKVTDRNSFGFGDDFEDDVDDLDENPGSNGSSSKFPKPDDYGDEEWEIKSS 120
             +            NSF      E + DDL  +    G SS+  KP DY DEEWEIK+S
Sbjct: 61  SESL-----------NSFSDNGKQEHESDDLSIDE-EKGRSSELQKPSDYDDEEWEIKNS 120

Query: 121 IGRDCTLDYEEEEDEYDKVAVGKEKGGDRLY--MKDITD-CGIEISSCTELPTSTRNFTR 180
           IG D TLD EEE D+ DKVA+G     +++Y  MKD+ D    E     ELP S     +
Sbjct: 121 IGMDSTLDMEEELDDNDKVALG-----EKVYCCMKDVNDDYETEADEWVELPASFNEREK 180

Query: 181 DPRANHLAAKVRLKEDAEASKTIDLLHVSENSAVAITGSECN-------------AFQNP 240
           DPRAN +AAK+RLKEDAEA   ++ LHVSE     ++ S  N             AF+  
Sbjct: 181 DPRANLIAAKLRLKEDAEAVNKLNSLHVSEELQDNLSMSTENEKPFVVSEDNLLGAFKES 240

Query: 241 ----------KSILKRKDNNLD-AKSHKRVRFDPECKISQESLGSKDFAMEANSLPGAGA 300
                     K ILKR++N  D +KS KRVRF  + K    + G  D  MEA+S P    
Sbjct: 241 HVGSSDENGLKPILKRRENQADDSKSPKRVRFSSDVKDRTLTEGDNDSVMEASS-PNEDK 300

Query: 301 AEVGNEPTFRSQTTQVPDYLQNPSRYTHYTFDSSNEVDEESNKKAYMNFLQLVRESKTME 360
            E           T +PDY++NPS+YT YTF+ S EVDEESN+KAYM+FL ++R      
Sbjct: 301 VEA-------VYPTGIPDYMRNPSKYTRYTFE-SGEVDEESNRKAYMDFLNMIRS----- 360

Query: 361 SHQDDDSTGP----PKSITFIPKKKAGDTIMLENSPLQYGVGKELVHQRGMSIGIAAVDT 420
             +D+    P    P+S+ F+PK+K      +EN      + K+     G  + I AVDT
Sbjct: 361 --KDESLVDPLMELPRSVAFVPKRKPMAESKVEN------IDKDC---EGRRVAI-AVDT 403

Query: 421 PTD-DVCSMEEDEPDKLEIRRNSSQKPGRQYRMRASTMESEEE 432
             D  + +MEEDEP   E  ++ +++PGRQYR RA   E  EE
Sbjct: 421 IEDCTISAMEEDEP---ETAQHVTKRPGRQYRARAK--EDPEE 403

[Close]
BLAST of Lsi05G004440 vs. TAIR10
Match: AT5G13310.1 (AT5G13310.1 unknown protein)

HSP 1 Score: 127.5 bits (319), Expect = 2.0e-29
Identity = 138/442 (31.22%), Postives = 203/442 (45.93%), Query Frame = 1 

Query: 2   DDSFKVRVDRIFGSL--------SSSSTSSSPAFNSSLTSLWCLTDDDIERKEWIKGKDE 61
           D+ F+ RV +IFGSL          S++SS+PA      S+W L+D ++E++EW   K +
Sbjct: 8   DEDFQSRVAKIFGSLPFSRPSSSKFSTSSSAPASRQQSGSVWTLSDTEVEKREW---KRD 67

Query: 62  EQPEPELESTSFFDGRRKVTDRNSFGFGDDFEDDVDDLDENPGSNGSSSKFPKPDDYGDE 121
                E+   S FD   K    +        EDD+ D+D               +D+ D 
Sbjct: 68  SYDRDEIPCASSFDELLKQQKPS--------EDDLKDIDCG-------------EDF-DG 127

Query: 122 EWEIKSSIGRDCTLDYEEEEDEYDKVAVGKEKGGDRLYMKDITDCGIEISSCTELPTSTR 181
            W I++S+G D TLD E EEDEYDKVA+G+E  G+         CG              
Sbjct: 128 VWSIRASMGLDRTLDDEAEEDEYDKVALGEENDGE--------GCG-------------- 187

Query: 182 NFTRDPRANHLAAKVRLKEDAEASKTIDLLHVSENSAVAITGSECNAFQNPKSILKRKDN 241
              RDPRAN++AA++RLKED   +   +      + +      E +     K ILKRK+N
Sbjct: 188 -RIRDPRANYVAARIRLKEDEIEANKFNTSASQPSESKEPHAEESSEAMPRKPILKRKEN 247

Query: 242 NLD--AKSHKRVRFDPECKISQESLGSKDFAMEANSLPGAGAAEVGNEPTFRSQTTQVPD 301
           + D  A++ KRVRFD    + +E+L   +    A+    A +  V ++        +VPD
Sbjct: 248 SSDSEARTSKRVRFD---SVPEETLKKPEDTCSAS----ASSKIVSHQ---GKSGARVPD 307

Query: 302 YLQNPSRYTHYTFDSSNEVDEESNKKAYMNFLQLVRESKTMESHQDDDSTGPPKSITFIP 361
           YL NPS YT Y+FD S E+D ES    YM+          +E  ++ +S   PK ++FIP
Sbjct: 308 YLLNPSSYTRYSFDPSCELDVESPTGEYMD------TPNAVEGLKNPESESFPK-VSFIP 367

Query: 362 KKKAGDTIMLENSPLQYGVGKELVHQRGMSIGIAAVDTPTDDVCSMEEDEPDKLEIRRNS 421
           + K  D               E       +  I A +   ++  S  ED     EIR + 
Sbjct: 368 QNKTKDV-------------SEDSSNCNETKPIVAGELAEEERPSATED--GDTEIRESE 369

Query: 422 S----QKPGRQYRMRASTMESE 430
           S    Q  GRQYR + S  E++
Sbjct: 428 SCTSFQSKGRQYRAKLSLDETD 369

[Close]
BLAST of Lsi05G004440 vs. NCBI nr
Match: gi|449455930|ref|XP_004145703.1| (PREDICTED: uncharacterized protein LOC101204233 [Cucumis sativus])

HSP 1 Score: 697.6 bits (1799), Expect = 1.4e-197
Identity = 367/436 (84.17%), Postives = 390/436 (89.45%), Query Frame = 1 

Query: 1   MDDSFKVRVDRIFGSLSSSST---SSSPAFNSSLTSLWCLTDDDIERKEWIKGKDEEQP- 60
           MDDSFKVRVDRIFGSLSSSST   SSS  FNSSL+SLW LTDD+IER+EWIKGK+EEQP 
Sbjct: 1   MDDSFKVRVDRIFGSLSSSSTTSSSSSSPFNSSLSSLWSLTDDEIERREWIKGKEEEQPP 60

Query: 61  EPELESTSFFDGRRKVTDRNSFGFGDDFEDDVDDLDENPGSNGSSSKFPKPDDYGDEEWE 120
           E +L  TSFFDG RKV +RNSFGF DDFEDD+DD+DENP SNGSSSKFPKPDDYGDEEWE
Sbjct: 61  ESDLAPTSFFDGLRKVNERNSFGFRDDFEDDLDDVDENPESNGSSSKFPKPDDYGDEEWE 120

Query: 121 IKSSIGRDCTLDYEEEEDEYDKVAVGKEKGGDRLYMKDITDCGIEISSCTELPTSTRNFT 180
           IKSSIGRDCTLDYEEEEDEYDKVAVG+EK GDRLYMK+I+DCGIEI S TELPTS RNFT
Sbjct: 121 IKSSIGRDCTLDYEEEEDEYDKVAVGREKNGDRLYMKEISDCGIEIGSSTELPTSIRNFT 180

Query: 181 RDPRANHLAAKVRLKEDAEASKTIDLLHVSENSAVAITGSECNAFQNPKSILKRKDNNLD 240
           RDPRANHLAAKVRLKEDAEASKTI LLHVSENSAVAIT SE N  QNPKSILKRKDN+LD
Sbjct: 181 RDPRANHLAAKVRLKEDAEASKTIHLLHVSENSAVAITDSESNTSQNPKSILKRKDNHLD 240

Query: 241 AKSHKRVRFDPECKISQESLGSKDFAMEANSLPGAGAAEVGNEPTFRSQTTQVPDYLQNP 300
           AK HKRVRFDPECKI+Q S GSKDF  E NSLP  GAAEVGNE TF S+ TQVPDYLQNP
Sbjct: 241 AKLHKRVRFDPECKITQISQGSKDFVTETNSLP--GAAEVGNEVTFPSRATQVPDYLQNP 300

Query: 301 SRYTHYTFDSSNEVDEESNKKAYMNFLQLVRESKTMESHQDDDSTGPPKSITFIPKKKAG 360
           SRYTHYTFDSSN+VDEESNKKAYMNFLQLVRESK +ESH++D  TGPPKSITFIPKKKA 
Sbjct: 301 SRYTHYTFDSSNDVDEESNKKAYMNFLQLVRESKRIESHENDAPTGPPKSITFIPKKKAD 360

Query: 361 DTIMLENSPLQYGVGKELVHQRGMSIGIAAVDTPTDDVCSMEEDEPDKLEIRRNSSQKPG 420
           DTIMLENSP Q GVGKE+VHQRGMSIGIA VD  TDDVCSMEEDEPDKLE + NSSQKPG
Sbjct: 361 DTIMLENSPRQNGVGKEVVHQRGMSIGIATVDDQTDDVCSMEEDEPDKLETKTNSSQKPG 420

Query: 421 RQYRMRASTMESEEEA 433
           R+YR+RA+ MESEEEA
Sbjct: 421 RRYRIRANNMESEEEA 434

[Close]
BLAST of Lsi05G004440 vs. NCBI nr
Match: gi|659098140|ref|XP_008449996.1| (PREDICTED: uncharacterized protein LOC103491712 [Cucumis melo])

HSP 1 Score: 696.8 bits (1797), Expect = 2.4e-197
Identity = 368/435 (84.60%), Postives = 389/435 (89.43%), Query Frame = 1 

Query: 1   MDDSFKVRVDRIFGSLSSSST--SSSPAFNSSLTSLWCLTDDDIERKEWIKGKDEEQP-E 60
           MDDSFKVRVDRIFGSLSSSST  SSS  FNSSL+SLW LTDD+IER+EWIKGK+EEQP E
Sbjct: 1   MDDSFKVRVDRIFGSLSSSSTASSSSSPFNSSLSSLWSLTDDEIERREWIKGKEEEQPPE 60

Query: 61  PELESTSFFDGRRKVTDRNSFGFGDDFEDDVDDLDENPGSNGSSSKFPKPDDYGDEEWEI 120
            +LE TSFFDGR KV +RN FGF DDFEDD+DDLDENP SNGSSSKFPKPDDYGDEEWEI
Sbjct: 61  SDLEPTSFFDGRTKVNERNLFGFRDDFEDDLDDLDENPKSNGSSSKFPKPDDYGDEEWEI 120

Query: 121 KSSIGRDCTLDYEEEEDEYDKVAVGKEKGGDRLYMKDITDCGIEISSCTELPTSTRNFTR 180
           KSSIGRDCTLDYEEEEDEYDKVAVGKEK GDRLYMKD+TDCGIEI S TELPTS RNFTR
Sbjct: 121 KSSIGRDCTLDYEEEEDEYDKVAVGKEKNGDRLYMKDVTDCGIEIGSSTELPTSIRNFTR 180

Query: 181 DPRANHLAAKVRLKEDAEASKTIDLLHVSENSAVAITGSECNAFQNPKSILKRKDNNLDA 240
           DPRANHLAAKVRLKEDAEASKTID LHVS+N+ VAIT SE NAFQNPKSILKRKDN+LDA
Sbjct: 181 DPRANHLAAKVRLKEDAEASKTIDSLHVSKNTGVAITDSESNAFQNPKSILKRKDNHLDA 240

Query: 241 KSHKRVRFDPECKISQESLGSKDFAMEANSLPGAGAAEVGNEPTFRSQTTQVPDYLQNPS 300
           KSHKRVRFDPECKI Q S  SKDF ++ NSLP    AEVGNE TF SQ TQVPDYL NPS
Sbjct: 241 KSHKRVRFDPECKIPQNSQESKDFVVKTNSLP--RGAEVGNEVTFPSQGTQVPDYLLNPS 300

Query: 301 RYTHYTFDSSNEVDEESNKKAYMNFLQLVRESKTMESHQDDDSTGPPKSITFIPKKKAGD 360
           +YTHYTF+SSN+VDEESNKKAYMNFLQLVRESK +ESHQDD STGPPKSITFIPKKKA D
Sbjct: 301 KYTHYTFNSSNDVDEESNKKAYMNFLQLVRESKRIESHQDDASTGPPKSITFIPKKKADD 360

Query: 361 TIMLENSPLQYGVGKELVHQRGMSIGIAAVDTPTDDVCSMEEDEPDKLEIRRNSSQKPGR 420
           TIMLENSPLQ GV KE+V ++GMSIGIAAVD  TDDVCSMEEDEPDKLEIRRNSSQKP R
Sbjct: 361 TIMLENSPLQSGVEKEVVQKKGMSIGIAAVDDQTDDVCSMEEDEPDKLEIRRNSSQKPDR 420

Query: 421 QYRMRASTMESEEEA 433
           QYR RA+ MESEEEA
Sbjct: 421 QYRTRANNMESEEEA 433

[Close]
BLAST of Lsi05G004440 vs. NCBI nr
Match: gi|225451613|ref|XP_002275732.1| (PREDICTED: uncharacterized protein LOC100242886 [Vitis vinifera])

HSP 1 Score: 381.3 bits (978), Expect = 2.2e-102
Identity = 228/448 (50.89%), Postives = 308/448 (68.75%), Query Frame = 1 

Query: 1   MDDSFKVRVDRIFGSLSSSSTSS-SPAFNSSLTSLWCLTDDDIERKEWIKGKDEEQPEPE 60
           M+DSF+VRVDRIFGSL+SSS+SS SP  N  L+SLW LTDD++E++EW + KD   PE E
Sbjct: 1   MEDSFRVRVDRIFGSLASSSSSSLSPCAN--LSSLWSLTDDEVEKREWNREKDI--PETE 60

Query: 61  LESTSFFDGRRKVTDRNSFGFGDDFEDDVDDLDENPGSN-----GSSSKFPKPDDYGDEE 120
           + S S          R+S GFG   E D++DLD++         GSSS+  KPDDY  EE
Sbjct: 61  VTSYSSNLDGLFAKKRSSVGFGKQLEQDLEDLDDDDLEGETRVRGSSSRPVKPDDYNHEE 120

Query: 121 WEIKSSIGRDCTLDYEEEEDEYDKVAVGKEKGGDRLYMKDITDCGIEISSCTELPTSTRN 180
           WEI+SSIG DC LD EEEEDEYDKVAVG+EK G+RLYM D  D  IE+ SC  +P S ++
Sbjct: 121 WEIRSSIGLDCALDNEEEEDEYDKVAVGREKAGERLYMTDFNDYAIELDSCNVIPESFKD 180

Query: 181 FTRDPRANHLAAKVRLKEDAEASKTIDLLHVSENSAVAITGSECNAFQ---NPKSILKRK 240
             RDPRANH+AAK+RL+EDAEA+ + D L VS+ +  A   ++ N  +   N KSILKRK
Sbjct: 181 VARDPRANHMAAKIRLQEDAEAAGSFDSLRVSDKTLPAAAATQINTSEDGANLKSILKRK 240

Query: 241 DNNLDAKSHKRVRFDPECKI---SQESLGSKDFAMEANSLPGAGAAEVGNEPTFRSQ-TT 300
           +N LD+K HKRVRFDP CK     +ES  +K+  ME  S+     A V  + +F  Q  +
Sbjct: 241 ENQLDSKLHKRVRFDPGCKTDSKEEESERTKNLTMETCSME---EATVSEKVSFTPQDPS 300

Query: 301 QVPDYLQNPSRYTHYTFDSSNEVDEESNKKAYMNFLQLVRESKTMESHQDDDSTGPPKSI 360
            VPDY++NP++YTHYTFDSS+++DEESN+ AYM+FL ++++   +ES Q D +   PK++
Sbjct: 301 GVPDYIRNPTKYTHYTFDSSSDIDEESNRCAYMDFLNMLKKPDALES-QADKAFDLPKAV 360

Query: 361 TFIPKKKAGDTIMLENS----PLQYGVGKELVHQRGMSIGIAAVDTPTDDVCSMEEDEPD 420
           TF P+KK+ DT M+++S      Q  VGKE +H++G+ +GIAA D    +VC+M+EDEP+
Sbjct: 361 TFTPRKKSADTYMMKHSSEFPQKQEDVGKEFMHRKGLPLGIAAEDCQETEVCAMDEDEPE 420

Query: 421 KLEIRRNSS-QKPGRQYRMRASTMESEE 431
            +  + ++S QKPGRQYR +AS+ E EE
Sbjct: 421 PVASKISTSLQKPGRQYRTKASS-ELEE 439

[Close]
BLAST of Lsi05G004440 vs. NCBI nr
Match: gi|694436143|ref|XP_009345191.1| (PREDICTED: FK506-binding protein 4-like [Pyrus x bretschneideri])

HSP 1 Score: 367.5 bits (942), Expect = 3.3e-98
Identity = 227/446 (50.90%), Postives = 291/446 (65.25%), Query Frame = 1 

Query: 1   MDDSFKVRVDRIFGSLSSSSTSSSPAFNSSLTSLWCLTDDDIERKEWIKGKDEEQPEPEL 60
           M+D+F+VRV +IFGSL+SSS S S    SSL+SLW LTD+++ER+EW   +D+  PEPE 
Sbjct: 1   MEDTFRVRVGKIFGSLASSSPSPSSGPPSSLSSLWSLTDEEMERREW--NRDKGSPEPEA 60

Query: 61  ESTSFFDGRRKVTDRNSFGFGDDFEDDVDDLD----------ENPGSNGSSSK---FPKP 120
           E   F+    K   +    F DD EDD+ DLD          E   S  SSS+    PKP
Sbjct: 61  EPLPFYS---KPKPKLKNDFSDDLEDDLLDLDDDVEDKEEDEEEEASASSSSQPATKPKP 120

Query: 121 DDYGDEEWEIKSSIGRDCTLDYEEEEDEYDKVAVGKEKGGDRLYMKDITDCGIEISSCTE 180
           DDY +EEWEIKSSIG DCTLD+E+EED YDKVAVGKE  GDRLYM+D+ D GI+I +  E
Sbjct: 121 DDYNEEEWEIKSSIGWDCTLDFEDEEDGYDKVAVGKETAGDRLYMRDVNDYGIDIDTQDE 180

Query: 181 LPTSTRNFTRDPRANHLAAKVRLKEDAEASKTIDLLHVSENSAVAITGSE--CNAFQNPK 240
           +P+S ++FTRDPRANHLAAK+RL++DAEA++ ID   VS N A +   +E       NPK
Sbjct: 181 VPSSIKDFTRDPRANHLAAKIRLQQDAEAAQKIDSHRVSGNRAPSAIAAENISEDAPNPK 240

Query: 241 SILKRK-DNNLD-AKSHKRVRFDPECKIS--QESLGSKDFAMEANSLPGAGAAEVGNEPT 300
           SILKRK DN LD +K+ KRVRFD  CK +  +E  G+KD  +E +S              
Sbjct: 241 SILKRKNDNQLDSSKTQKRVRFDSNCKSNEDEEGEGAKDVTVETHS-------------- 300

Query: 301 FRSQTTQVPDYLQNPSRYTHYTFDSSNEVDEESNKKAYMNFLQLVRESKTMESHQDDDST 360
             ++   VPDY++NPSRYTHYTFDSS +VDEESNK+AYM+FL LVR+S +ME   +D S 
Sbjct: 301 --NENPPVPDYIRNPSRYTHYTFDSSADVDEESNKQAYMDFLNLVRKSNSMEPQAEDASV 360

Query: 361 GPPKSITFIPKKKAGDTIMLE---NSPLQYGVGKELVHQRGMSIGIAAVDTPTDDVCSME 420
              K +TFIP+KK+ D +M+E    S    G  +E    + M + IAA D   +DVC+ME
Sbjct: 361 DLSKPVTFIPRKKSSDAVMMEYDGESERPGGDRRESAACKVMPLAIAAED--NEDVCAME 420

Query: 421 EDEPDKLEIRRNSSQKPGRQYRMRAS 425
           EDEPD     R+S Q+ GRQYR + S
Sbjct: 421 EDEPDTATDGRSSIQRTGRQYRTKTS 423

[Close]
BLAST of Lsi05G004440 vs. NCBI nr
Match: gi|728850289|gb|KHG29732.1| (Protein TSSC4 [Gossypium arboreum])

HSP 1 Score: 367.5 bits (942), Expect = 3.3e-98
Identity = 225/447 (50.34%), Postives = 293/447 (65.55%), Query Frame = 1 

Query: 1   MDDSFKVRVDRIFGSLSSSSTSSSPAFNSSLTSLWCLTDDDIERKEWIKGKDEEQPEPEL 60
           M+DSF  RV ++FGSLSSSS+SSS + +  L+SLW LTDD+IE++EW + K+  Q + E 
Sbjct: 1   MEDSFNARVGKVFGSLSSSSSSSSNSKSLPLSSLWSLTDDEIEKREWNRDKNSPQQQDED 60

Query: 61  ESTSFFDGRRKVTDRNSFGFGDDFEDDVDDLD----ENPGSNGSSSKFPKPDDYGDEEWE 120
           E       ++K     +  FG + E+D+DDLD    E   ++ SSSK  KP+DY DEEWE
Sbjct: 61  EGFVHNFSQKK----KAINFGAELENDLDDLDDEDAEEEEASASSSKPAKPEDYNDEEWE 120

Query: 121 IKSSIGRDCTLDYEEEEDEYDKVAVGKEKGGDRLYMKDITDCGIEISSCTELPTSTRNFT 180
           IKSSIGRDCTLDYEEEED YDKVAVG++K GDRLYMKD+ D  I+  SC  +PT+ ++F+
Sbjct: 121 IKSSIGRDCTLDYEEEEDAYDKVAVGRDKNGDRLYMKDVNDYDIDADSCNTIPTTFKDFS 180

Query: 181 RDPRANHLAAKV-----------RLKEDAEASKTIDLLHVSENSAVAITGSECNAFQ--N 240
           RDPRANH+AAK+           RL+EDAEA+K ID LHVS++ A     +  + F+  N
Sbjct: 181 RDPRANHIAAKLRLMEDEEATKRRLEEDAEAAKKIDSLHVSDSDATVGVDAHSSTFEDGN 240

Query: 241 PKSILKRKDNNLDAKSHKRVRFDPECKISQESLG---SKDFAMEANSLPGAGAAEVGNEP 300
           PKSILKRKD   ++KS KRVRFD EC  +  S G   +KD   E   L     A V NE 
Sbjct: 241 PKSILKRKDAESNSKSQKRVRFDSECCKNDCSEGPERTKDVQGEV-CLTEEEDAMVSNEV 300

Query: 301 TFRSQTTQVPDYLQNPSRYTHYTFDSSNEVDEESNKKAYMNFLQLVRESKTMESHQDDDS 360
           +     + +PDY++NPS+YT YTFD+S +VD+ESN+ AYM+FL+LVR S   E   DD  
Sbjct: 301 S--DYPSGIPDYMRNPSKYTRYTFDTS-DVDDESNRLAYMDFLRLVRRSDGTEPQADDGP 360

Query: 361 TGPPKSITFIPKKKAGDTIM----LENSPLQYGVGKELVHQRGMSIGIAAVDTPTDDVCS 420
               K +TFIP+KK GD IM     E+     G  K+ +H+RG+ IGIAA DT  D VC+
Sbjct: 361 GDLTKPVTFIPRKKIGDVIMGESGSESKQTGEGADKKPMHRRGLQIGIAAGDT-DDGVCA 420

Query: 421 MEEDEPDKLEIRRNSSQKPGRQYRMRA 424
           M+EDEP      RN SQ+ GRQYRM++
Sbjct: 421 MDEDEPQTSIDNRNISQRSGRQYRMKS 438

The following BLAST results are available for this feature:
BLAST of Lsi05G004440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi05G004440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDS6_CUCSA9.6e-19884.17Uncharacterized protein OS=Cucumis sativus GN=Csa_3G599460 PE=4 SV=1[more]
F6H429_VITVI1.5e-10250.89Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g01100 PE=4 SV=... [more]
A0A0B0PXY2_GOSAR2.3e-9850.34Protein TSSC4 OS=Gossypium arboreum GN=F383_10076 PE=4 SV=1[more]
A0A059ATJ9_EUCGR8.7e-9848.70Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02446 PE=4 SV=1[more]
A0A0D2QWU6_GOSRA2.5e-9750.33Uncharacterized protein OS=Gossypium raimondii GN=B456_001G276100 PE=4 SV=1[more]
BLAST of Lsi05G004440 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G13970.14.2e-5940.17 unknown protein[more]
AT5G13310.12.0e-2931.22 unknown protein[more]
BLAST of Lsi05G004440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449455930|ref|XP_004145703.1|1.4e-19784.17PREDICTED: uncharacterized protein LOC101204233 [Cucumis sativus][more]
gi|659098140|ref|XP_008449996.1|2.4e-19784.60PREDICTED: uncharacterized protein LOC103491712 [Cucumis melo][more]
gi|225451613|ref|XP_002275732.1|2.2e-10250.89PREDICTED: uncharacterized protein LOC100242886 [Vitis vinifera][more]
gi|694436143|ref|XP_009345191.1|3.3e-9850.90PREDICTED: FK506-binding protein 4-like [Pyrus x bretschneideri][more]
gi|728850289|gb|KHG29732.1|3.3e-9850.34Protein TSSC4 [Gossypium arboreum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G004440.1Lsi05G004440.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13445FAMILY NOT NAMEDcoord: 2..426
score: 6.5