Lsi05G004430 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G004430
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Histone-lysine N-methyltransferase
Location	chr05 : 5702428 .. 5706863 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTTGCTGTTGAAAACTTGTTTGGCCTTGGTAACTATTTTGAAAAGGCATCAGGCTTGAATATCAACCACAACAAATCTGAGATTATGGGCATTAAATTTACACAAGATGTTATTGAATCGATTGCTAAAAAAATTGGTTGCAATTGGGTCAATGGCCTTGCACATATCTTGGTTCACCTTTTTTTTTTTTTTTTGACAAGCCAAGGACATTATCATTTTTGAATCCCATTGTTGAGAAAATTGATAGAAGGCTACAGGAAATTGAATATTCAAATATTCAAATTAAATTACACAAGCTTCTAATTTCTATTTCAGCCCGTCTTTTTCTAATACCATGGTAATCAAAGATACTTTACTTTTCCTGTCTTTGTAGAGGCGCTCAAGAGATGCATCCTTGCCAGCAAACAATTCTTTGGATGGTATAGATGATCGAAGATCTGAAAGTGTGCCAGAGTTCTGCATTGATGCTTGTTCCACTGGAAATATTGCAAGGTTTATCAATCATAGTTGTGAACCTAATCTTTTTGTCCAATGTGTATTGAGCTCACACCATGACATCAAACTTGCTCGAGTGGTACTATTTGCTGCAGAAAACATACCACCCCTCCAGGTTTCAACTTACATGTTTTTTGTTCTTCCTATCAAATGTTAGTGCATGTTAGTTTTTGCAACAGATTTTCGTTCTTCTGTTTAGGAAGAGATGATTTTTTAATTATTGTTTTTGTTAATCACTAGTCTTTCCTCTTTGATTTCCCATTAGCATAAATTATTGTAACACACCTTTAGGTGGTGGGAGCCATTTAAGCTCCTTATATTTCATTTATCAATGAAATATGTTTCTCATTAAAAAAAGAAAAAAGAAAAAATTGTTATATATTTTAAAAAATGTAAATTTTAATAAATGTATCCTTGTCGTGTCTTATGTCCTAGATTAGTAACTTGATGGTTTCTAATGGTATTTATGCAATTTTGTTCAAGAATTTTTCCTTAAATAAGGACTCTCCCTAGGAATAAGTAAAAATTTAAGAAGAACGTCCATTATTGTTCTTGCTATCCGCCCCCATTTTAAGAAGTTCCTTCACCTTTGTCTGATGTCATGAAACTCGGCAGGGCCTCAACAACTGGTTTGAGCCACTGTTCGTTAACAGTTTTGTTTTCAATATATGTATATATATACAGTCATATTATATATATATATGTATGACTAAATTCAAAATTAATTTTTAAGAATTAAAGGAATAAGTTCAAGCTCAGAAAGTTTTGTTTTTAAATTTGTGTTTGTTTCCTTACGATTTCTTTACCATTTGTTCATCTGCATTAAAGAAATAGACTTGGATTTTCTTTATTAAAAATAATTGACTTCGGTTTCGAAAACATAGAAAGTAGATAACAAAGTAAAGAAACATCAGCACTGAACATCAACCGGCAGAAATCTGGATTTTTGGGCATCAATTGTGACAGTTTATGGGTTGAAGACGTTGCAAAAAAGTTTGACTGTAGGATGGGTTCTTGGCCGGCTAATTATTTGGGTCTCCCACTATTTGGTAAGCCTAGCTCTCTCTCTTTTTGGCAGCCCATCATGGACAAAATTGACAAGAGACTACACTCTTGGCAACACAACTCTCTCAAAAGGAGGAAGATTGACTCTCTTAAAGGCCACATTATCAAACCTACCCATTTACTTCTTGTCTCTTTTCCAAATACCTTCCAGGGTTGCTGATTTTATTGACAAGAGATTCAGGAATTTCTATGGTGTGGTAATGGAAGCAGCAACACTTCTCACCTCCTTAAGATGGCAGATTCTGAAACAACCATTGAAGGATAGTGGACTAAGCATTTTAGATGTTAGGCAGAGAAATAAGTCATTACTTGCTAAATGGATTTGGCATTTTTTAGTAGAAAAGGATGCTTTATGGAGAAAACTTATCAAAGCAAAATATGGATCCAACCATTTTGACCTGAAACCTACTGAGCATCGAGCTGGATCAAGTATAAGCCTATGGTCACATATTATGAAGCATACCTCGTTTATAGCAATACTCTTTGTAGGGTTGGGAATGGTTCCTGCACTGCTTTCTGGGAGAATATTTGGTTTGGTACTGAACCTCTTTGTCAGGTCTATCCCCAGTTGTTTGCAATCACCAATTATTACTTATCTCATGCCTAGACTTCAGCTTAATATTCATCCTGATCACTGAAGTTGGAAGTTGGAACCCTGTGGCGCTTTTTCATCAAGATTTTTGTTGTCTTACATAACAACAAATAGCTCCTCCATCAATTCTGTCATCTTCAAAAAACTTTGGAAATTACACTGCCCTAAAAGGATTAAATTCTATTTATGGGAATGTCACTCTTGCCTCAATACCATGGATCGTTTACAAGCTAGATGCCCTTGGATTACTCTCTCTCCATCGTGGTGCTACTTATGTCAAAACAACAATGAATTAGTGAATCACCTTTTCATCCATTGCCATTTTGTACAGCCAATTTGGACTGAAATCATCAAAGCTTTGGGATAGAATTTGGATCCCCCTCGAGATAACATGGAATGGGTCAATCTCATGTATTTGGATCACCCATTCAAGGGTCACAAGGCTAATATTTGGACCAACATCATTTGTGTGGTTTTGTCTAAGATTAGGGAAAAAATAAATGATCGCATATTCAACCACAAATCGGTGTCTTCCAAGGATATTTTGGACTCTTCTATTTATTATGCTTATAATGCTATTTTTTGGTGTAAAGATTACCAACCTCTTAAAGATCATAGCTTAGATTTTCTTGTTGTAAATTGGACCCATCTTTTGTATTGCCTATCATAGGGATCTTTTGTACATCCTTTGGATATTTCATACATCAATGTAATTGTAAAAAAAAAAAAAAAAAGGTAAAGAAACACATAGATCATAGGTAAAAGTAGTGAGTATAAACTTAATTTTGAACAACTAAAAATTAAATAGTTATCAAATGGGCATTCATAGTTATCAAATTAAGCTTAAATTCTCTAATTAGATTACATGGAGGTTCTTGATTTTGGAACTTCTAAGTATTTGTTACTTAATTGCAGGAACTGACATACGACTATGGCTATGCACTTGATAGCGTGTATGGTCCAGATGGGAAGATAAAACAGATGCCCTGCTTCTGTGGTGCAACTGAGTGTAGGAAGCGGTTGTTTTAGTCTAGGGAAAGCCTTCAGCTGCTGGTACATTATCATTACGGTACCCTCCCTATCTTCTGTTATTTTTATTTCTTGTCTGGAAAATCAATCTTCAGTTTCTTTTCATCCGCAGTTCCATCACCAAACTCACCATGTTCGCATTTGTTCTCCCGTTTCTAGGTACATCATACGTCCACACAGATCCGCCCCTCAAAACTACATTTTGTTATTACTTATAGGGGAAGTTGTACATACATTTTTTGGGGAAAAACTGTTGAAAGTTTAATCTGTGATGCCTTATATCCTTGTAATTCGATTGTTCAAACCTCATTTGTTTTGATGCGATATTCTGTGTCTTGGACGTTTATTAATATAACATTTAGAAAACTTTACGGCTATCTTTTATTGTTTTGTCTGAATTATTAATTAAGTTAAGGAGCTATACAAGAAGTTTCAATCTCTCTGAAATATTGAGAGGTATAGTTTAATTATTTAGATAGAGCTTGTGAGTTGGTTGATGCAAACATAATCTGTAACATAACTTTCATTTAACTGGACCGAGTTTAAAAAATAAATATGGTTCATTTTCTGGCTTAAGAAACCATTGACAGCATTTTTTTTATTACCACAAAAGTATGAGAATTTGGAGTTCCTACGTGTTAATTACTACTTATGCTATGATAGAAATTCTTGACAATATTTTGCATGAGGATAGTAATTTTTAAAGTAATGTTAGTCTATATGAACTTTTATGTTTTGTTTTTTATTGATTTGTCATTGTTATGCGTGTATATTATAAATCTTATTCTAATTTGTTTGCATTTCAATTACTTTTTTTTTTCTTTCTTTTAATATGTAGGTGGACTGAGATGTTTCTGATGCGAAATTGCTATTCTATCTCACCACCTTGAATACAGAGAATGAGAAGATGGCTTTCTTTAGTTTCTAGAATTGTAGTTACTAGAAAGAAAAGGAAAATACAAGATCATAGAGAAGGAATTGGAATCCAAGGGGCCAGTCAACAAACAAGCTACTTTGTTCAGTGAATTGACAGCCACAAAAGGTATATGCTTCAGAAAGATTATTCGATTAAATGATGGCCTCATATTTTCAAGGTTAATGATGAAATGTCATTTTGTTAATACTGACCAACTGAAATTTGGAAAAAATAACTAGAATCAAAGTGAGTTGAACCTGGCGAACCAATAATATACAAATATACACCTTTAATATGACTCTTCAATGACATTAGTTAACACTAAACTATTTAA

mRNA sequence

ATGCTCTTGCTGTTGAAAACTTGTTTGGCCTTGAGGCGCTCAAGAGATGCATCCTTGCCAGCAAACAATTCTTTGGATGGTATAGATGATCGAAGATCTGAAAGTGTGCCAGAGTTCTGCATTGATGCTTGTTCCACTGGAAATATTGCAAGGTTTATCAATCATAGTTGTGAACCTAATCTTTTTGTCCAATGTGTATTGAGCTCACACCATGACATCAAACTTGCTCGAGTGGTACTATTTGCTGCAGAAAACATACCACCCCTCCAGGAACTGACATACGACTATGGCTATGCACTTGATAGCGTGTATGGTCCAGATGGGAAGATAAAACAGATGCCCTGCTTCTGTGGTGCAACTGAGTGTAGGAAGCGGTTGTTTTAGTCTAGGGAAAGCCTTCAGCTGCTGTTCCATCACCAAACTCACCATGTTCGCATTTGTTCTCCCGTTTCTAGGTGGACTGAGATGTTTCTGATGCGAAATTGCTATTCTATCTCACCACCTTGAATACAGAGAATGAGAAGATGGCTTTCTTTAGTTTCTAGAATTGTAGTTACTAGAAAGAAAAGGAAAATACAAGATCATAGAGAAGGAATTGGAATCCAAGGGGCCAGTCAACAAACAAGCTACTTTGTTCAGTGAATTGACAGCCACAAAAGGTATATGCTTCAGAAAGATTATTCGATTAAATGATGGCCTCATATTTTCAAGGTTAATGATGAAATGTCATTTTGTTAATACTGACCAACTGAAATTTGGAAAAAATAACTAGAATCAAAGTGAGTTGAACCTGGCGAACCAATAATATACAAATATACACCTTTAATATGACTCTTCAATGACATTAGTTAACACTAAACTATTTAA

Coding sequence (CDS)

ATGCTCTTGCTGTTGAAAACTTGTTTGGCCTTGAGGCGCTCAAGAGATGCATCCTTGCCAGCAAACAATTCTTTGGATGGTATAGATGATCGAAGATCTGAAAGTGTGCCAGAGTTCTGCATTGATGCTTGTTCCACTGGAAATATTGCAAGGTTTATCAATCATAGTTGTGAACCTAATCTTTTTGTCCAATGTGTATTGAGCTCACACCATGACATCAAACTTGCTCGAGTGGTACTATTTGCTGCAGAAAACATACCACCCCTCCAGGAACTGACATACGACTATGGCTATGCACTTGATAGCGTGTATGGTCCAGATGGGAAGATAAAACAGATGCCCTGCTTCTGTGGTGCAACTGAGTGTAGGAAGCGGTTGTTTTAG

Protein sequence

MLLLLKTCLALRRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF

Homology

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BLAST of Lsi05G004430 vs. Swiss-Prot
Match: SUVH4_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 OS=Arabidopsis thaliana GN=SUVH4 PE=1 SV=2)

HSP 1 Score: 184.1 bits (466), Expect = 9.5e-46
Identity = 84/116 (72.41%), Postives = 96/116 (82.76%), Query Frame = 1


Query: 12  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHH 71
           RR RD ++P NN +        E+ PEFCIDA STGN ARFINHSCEPNLFVQCVLSSH 
Sbjct: 511 RRLRDVAVPMNNGVS--QSSEDENAPEFCIDAGSTGNFARFINHSCEPNLFVQCVLSSHQ 570

Query: 72  DIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF 128
           DI+LARVVLFAA+NI P+QELTYDYGYALDSV+GPDGK+KQ+ C+CGA  CRKRL+
Sbjct: 571 DIRLARVVLFAADNISPMQELTYDYGYALDSVHGPDGKVKQLACYCGALNCRKRLY 624

[Close]

BLAST of Lsi05G004430 vs. Swiss-Prot
Match: SUVH6_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 OS=Arabidopsis thaliana GN=SUVH6 PE=2 SV=2)

HSP 1 Score: 125.6 bits (314), Expect = 4.0e-28
Identity = 55/89 (61.80%), Postives = 63/89 (70.79%), Query Frame = 1


Query: 39  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGY 98
           F IDA S GN+ RFINHSC PNL+ Q VL  H D ++  V+ FA +NIPPLQEL YDY Y
Sbjct: 702 FTIDAASKGNVGRFINHSCSPNLYAQNVLYDHEDSRIPHVMFFAQDNIPPLQELCYDYNY 761

Query: 99  ALDSVYGPDGKIKQMPCFCGATECRKRLF 128
           ALD V    G IKQ PCFCGA  CR+RL+
Sbjct: 762 ALDQVRDSKGNIKQKPCFCGAAVCRRRLY 790

[Close]

BLAST of Lsi05G004430 vs. Swiss-Prot
Match: SUVH5_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 OS=Arabidopsis thaliana GN=SUVH5 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.2e-25
Identity = 48/89 (53.93%), Postives = 63/89 (70.79%), Query Frame = 1


Query: 39  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGY 98
           F I+A   GNI RFINHSC PNL+ Q VL  H +I++  ++ FA +NIPPLQEL+YDY Y
Sbjct: 706 FTINAAQKGNIGRFINHSCSPNLYAQDVLYDHEEIRIPHIMFFALDNIPPLQELSYDYNY 765

Query: 99  ALDSVYGPDGKIKQMPCFCGATECRKRLF 128
            +D VY  +G IK+  C+CG+ EC  RL+
Sbjct: 766 KIDQVYDSNGNIKKKFCYCGSAECSGRLY 794

[Close]

BLAST of Lsi05G004430 vs. Swiss-Prot
Match: STB1B_DANRE (Histone-lysine N-methyltransferase SETDB1-B OS=Danio rerio GN=setdb1b PE=2 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-16
Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = 1


Query: 39   FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGY 98
            + IDA   GN+ R++NHSC PNLFVQ V    HD++   V  FA++ I    ELT+DY Y
Sbjct: 1121 YIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNY 1180

Query: 99   ALDSVYGPDGKIKQMPCFCGATECRKRL 127
             + SV G     K++ C CG+TECR RL
Sbjct: 1181 EVGSVEG-----KELLCCCGSTECRGRL 1203

[Close]

BLAST of Lsi05G004430 vs. Swiss-Prot
Match: SETB1_XENLA (Histone-lysine N-methyltransferase SETDB1 OS=Xenopus laevis GN=setdb1 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-16
Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = 1


Query: 39   FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGY 98
            + IDA   GN+ R++NHSC PNLFVQ V    HD++   V  FA++ I    ELT+DY Y
Sbjct: 1186 YIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNY 1245

Query: 99   ALDSVYGPDGKIKQMPCFCGATECRKRL 127
             + SV G     K++ C CG+TECR RL
Sbjct: 1246 EVGSVEG-----KKLLCCCGSTECRGRL 1268

[Close]

BLAST of Lsi05G004430 vs. TrEMBL
Match: A0A0A0LC23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G599470 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 8.6e-62
Identity = 114/118 (96.61%), Postives = 117/118 (99.15%), Query Frame = 1


Query: 10  ALRRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSS 69
           ++RRSRDASLPANNSLD IDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLS+
Sbjct: 49  SVRRSRDASLPANNSLDVIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSA 108

Query: 70  HHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF 128
           HHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF
Sbjct: 109 HHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF 166

[Close]

BLAST of Lsi05G004430 vs. TrEMBL
Match: B9GNG0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s23900g PE=4 SV=2)

HSP 1 Score: 205.3 bits (521), Expect = 4.4e-50
Identity = 96/116 (82.76%), Postives = 105/116 (90.52%), Query Frame = 1


Query: 12  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHH 71
           RR  D S+ A NS DG DD++SESVPEFCIDA STGNIARFINHSCEPNLFVQCVLSSHH
Sbjct: 171 RRLGDVSVSAINSFDG-DDQKSESVPEFCIDAGSTGNIARFINHSCEPNLFVQCVLSSHH 230

Query: 72  DIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF 128
           D+KLARV+LFAA+NIPP+QELTYDYGYALDSV GP GKIKQMPC+CGA +CRKRLF
Sbjct: 231 DVKLARVMLFAADNIPPMQELTYDYGYALDSVSGPSGKIKQMPCYCGAADCRKRLF 285

[Close]

BLAST of Lsi05G004430 vs. TrEMBL
Match: B9IA63_POPTR (Histone-lysine N-methyltransferase family protein OS=Populus trichocarpa GN=POPTR_0014s14080g PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 9.8e-50
Identity = 96/121 (79.34%), Postives = 107/121 (88.43%), Query Frame = 1


Query: 6   KTCLALRRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQC 65
           K  +  RR  D S+PA N+ DG DD++SESVPEFCIDA STGNIARFINHSCEPNLFVQC
Sbjct: 4   KLIIIQRRLGDVSVPAINNFDG-DDQKSESVPEFCIDAGSTGNIARFINHSCEPNLFVQC 63

Query: 66  VLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKR 125
           VLSSHHD+KLARV+LFAA+NIPP+QELTYDYGYALDSV GPDGKI QMPC+CGA +CRKR
Sbjct: 64  VLSSHHDVKLARVMLFAADNIPPMQELTYDYGYALDSVSGPDGKIIQMPCYCGAADCRKR 123

Query: 126 L 127
           L
Sbjct: 124 L 123

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BLAST of Lsi05G004430 vs. TrEMBL
Match: A0A067L3Q8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26876 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 6.4e-49
Identity = 93/116 (80.17%), Postives = 104/116 (89.66%), Query Frame = 1


Query: 12  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHH 71
           RR  D S+P  N+ +  +D++SESVPEFCIDA STGNIARFINHSCEPNLFVQCVLSSHH
Sbjct: 574 RRLGDVSVPTINNSNRPEDQKSESVPEFCIDAGSTGNIARFINHSCEPNLFVQCVLSSHH 633

Query: 72  DIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF 128
           D+KLARV+LFAA+NIPPLQELTYDYGYALDSV GPDGKIKQM C+CGA +CRKRLF
Sbjct: 634 DLKLARVMLFAADNIPPLQELTYDYGYALDSVTGPDGKIKQMACYCGAADCRKRLF 689

[Close]

BLAST of Lsi05G004430 vs. TrEMBL
Match: A0A061EKW7_THECC (SET domain protein OS=Theobroma cacao GN=TCM_017347 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-48
Identity = 90/116 (77.59%), Postives = 104/116 (89.66%), Query Frame = 1


Query: 12  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHH 71
           RR +DASLP   ++D  D++RSESVPEFCIDA S GN+ARFINHSCEPNLF+QCVLS+H 
Sbjct: 595 RRQQDASLPMIQNMDKNDEQRSESVPEFCIDAGSFGNVARFINHSCEPNLFIQCVLSAHQ 654

Query: 72  DIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF 128
           D KLARV+LFAA+NIPPLQELTYDYGYALDSVYGPDGK+K+M C+CGA +CRKRLF
Sbjct: 655 DFKLARVMLFAADNIPPLQELTYDYGYALDSVYGPDGKVKRMTCYCGAEDCRKRLF 710

[Close]

BLAST of Lsi05G004430 vs. TAIR10
Match: AT5G13960.1 (AT5G13960.1 SU(VAR)3-9 homolog 4)

HSP 1 Score: 184.1 bits (466), Expect = 5.3e-47
Identity = 84/116 (72.41%), Postives = 96/116 (82.76%), Query Frame = 1


Query: 12  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHH 71
           RR RD ++P NN +        E+ PEFCIDA STGN ARFINHSCEPNLFVQCVLSSH 
Sbjct: 511 RRLRDVAVPMNNGVS--QSSEDENAPEFCIDAGSTGNFARFINHSCEPNLFVQCVLSSHQ 570

Query: 72  DIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF 128
           DI+LARVVLFAA+NI P+QELTYDYGYALDSV+GPDGK+KQ+ C+CGA  CRKRL+
Sbjct: 571 DIRLARVVLFAADNISPMQELTYDYGYALDSVHGPDGKVKQLACYCGALNCRKRLY 624

[Close]

BLAST of Lsi05G004430 vs. TAIR10
Match: AT2G22740.2 (AT2G22740.2 SU(VAR)3-9 homolog 6)

HSP 1 Score: 125.6 bits (314), Expect = 2.2e-29
Identity = 55/89 (61.80%), Postives = 63/89 (70.79%), Query Frame = 1


Query: 39  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGY 98
           F IDA S GN+ RFINHSC PNL+ Q VL  H D ++  V+ FA +NIPPLQEL YDY Y
Sbjct: 702 FTIDAASKGNVGRFINHSCSPNLYAQNVLYDHEDSRIPHVMFFAQDNIPPLQELCYDYNY 761

Query: 99  ALDSVYGPDGKIKQMPCFCGATECRKRLF 128
           ALD V    G IKQ PCFCGA  CR+RL+
Sbjct: 762 ALDQVRDSKGNIKQKPCFCGAAVCRRRLY 790

[Close]

BLAST of Lsi05G004430 vs. TAIR10
Match: AT2G35160.1 (AT2G35160.1 SU(VAR)3-9 homolog 5)

HSP 1 Score: 115.9 bits (289), Expect = 1.8e-26
Identity = 48/89 (53.93%), Postives = 63/89 (70.79%), Query Frame = 1


Query: 39  FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGY 98
           F I+A   GNI RFINHSC PNL+ Q VL  H +I++  ++ FA +NIPPLQEL+YDY Y
Sbjct: 706 FTINAAQKGNIGRFINHSCSPNLYAQDVLYDHEEIRIPHIMFFALDNIPPLQELSYDYNY 765

Query: 99  ALDSVYGPDGKIKQMPCFCGATECRKRLF 128
            +D VY  +G IK+  C+CG+ EC  RL+
Sbjct: 766 KIDQVYDSNGNIKKKFCYCGSAECSGRLY 794

[Close]

BLAST of Lsi05G004430 vs. TAIR10
Match: AT1G73100.1 (AT1G73100.1 SU(VAR)3-9 homolog 3)

HSP 1 Score: 78.6 bits (192), Expect = 3.2e-15
Identity = 40/104 (38.46%), Postives = 56/104 (53.85%), Query Frame = 1


Query: 28  IDDRRSESVPE-------FCIDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVL 87
           +D+  S  VPE         I A   GN+ARF+NHSC PN+F Q V+   +   +  +  
Sbjct: 562 VDEDPSTEVPEEFNLPSPLLISAKKFGNVARFMNHSCSPNVFWQPVIREGNGESVIHIAF 621

Query: 88  FAAENIPPLQELTYDYGYALDSVYGPDGKIK-QMPCFCGATECR 124
           FA  +IPP+ ELTYDYG +  S    +  +  Q  C CG+ +CR
Sbjct: 622 FAMRHIPPMAELTYDYGISPTSEARDESLLHGQRTCLCGSEQCR 665

[Close]

BLAST of Lsi05G004430 vs. TAIR10
Match: AT5G04940.1 (AT5G04940.1 SU(VAR)3-9 homolog 1)

HSP 1 Score: 75.1 bits (183), Expect = 3.5e-14
Identity = 36/84 (42.86%), Postives = 48/84 (57.14%), Query Frame = 1


Query: 41  IDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYAL 100
           I A + GN+ARF+NHSC PN+F Q V   ++      V  FA  +IPP+ ELTYDYG + 
Sbjct: 583 ISAKNVGNVARFMNHSCSPNVFWQPVSYENNSQLFVHVAFFAISHIPPMTELTYDYGVSR 642

Query: 101 DS-VYGPDGKIKQMPCFCGATECR 124
            S     +    +  CFCG+  CR
Sbjct: 643 PSGTQNGNPLYGKRKCFCGSAYCR 666

[Close]

BLAST of Lsi05G004430 vs. NCBI nr
Match: gi|700203119|gb|KGN58252.1| (hypothetical protein Csa_3G599470 [Cucumis sativus])

HSP 1 Score: 244.2 bits (622), Expect = 1.2e-61
Identity = 114/118 (96.61%), Postives = 117/118 (99.15%), Query Frame = 1


Query: 10  ALRRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSS 69
           ++RRSRDASLPANNSLD IDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLS+
Sbjct: 49  SVRRSRDASLPANNSLDVIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSA 108

Query: 70  HHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF 128
           HHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF
Sbjct: 109 HHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF 166

[Close]

BLAST of Lsi05G004430 vs. NCBI nr
Match: gi|659098129|ref|XP_008449991.1| (PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Cucumis melo])

HSP 1 Score: 244.2 bits (622), Expect = 1.2e-61
Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 1


Query: 12  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHH 71
           RRSRDASLPANNSLD +DDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHH
Sbjct: 606 RRSRDASLPANNSLDVVDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHH 665

Query: 72  DIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF 128
           DIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF
Sbjct: 666 DIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF 721

[Close]

BLAST of Lsi05G004430 vs. NCBI nr
Match: gi|778681843|ref|XP_011651591.1| (PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 2.1e-61
Identity = 114/116 (98.28%), Postives = 115/116 (99.14%), Query Frame = 1


Query: 12  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHH 71
           RRSRDASLPANNSLD IDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLS+HH
Sbjct: 606 RRSRDASLPANNSLDVIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSAHH 665

Query: 72  DIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF 128
           DIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF
Sbjct: 666 DIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF 721

[Close]

BLAST of Lsi05G004430 vs. NCBI nr
Match: gi|743834312|ref|XP_011024754.1| (PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like [Populus euphratica])

HSP 1 Score: 206.5 bits (524), Expect = 2.8e-50
Identity = 95/116 (81.90%), Postives = 105/116 (90.52%), Query Frame = 1


Query: 12  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHH 71
           RR  D S+P  N+ DG DD++SESVPEFCIDA STGNIARFINHSCEPNLFVQCVLSSHH
Sbjct: 572 RRLGDVSVPGINNFDG-DDQKSESVPEFCIDAVSTGNIARFINHSCEPNLFVQCVLSSHH 631

Query: 72  DIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF 128
           D+KLARV+LFAA+NIPP+QELTYDYGYALDSV GP GKIKQMPC+CGA +CRKRLF
Sbjct: 632 DVKLARVMLFAADNIPPMQELTYDYGYALDSVSGPSGKIKQMPCYCGAADCRKRLF 686

[Close]

BLAST of Lsi05G004430 vs. NCBI nr
Match: gi|566159673|ref|XP_002301759.2| (hypothetical protein POPTR_0002s23900g [Populus trichocarpa])

HSP 1 Score: 205.3 bits (521), Expect = 6.3e-50
Identity = 96/116 (82.76%), Postives = 105/116 (90.52%), Query Frame = 1


Query: 12  RRSRDASLPANNSLDGIDDRRSESVPEFCIDACSTGNIARFINHSCEPNLFVQCVLSSHH 71
           RR  D S+ A NS DG DD++SESVPEFCIDA STGNIARFINHSCEPNLFVQCVLSSHH
Sbjct: 171 RRLGDVSVSAINSFDG-DDQKSESVPEFCIDAGSTGNIARFINHSCEPNLFVQCVLSSHH 230

Query: 72  DIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKIKQMPCFCGATECRKRLF 128
           D+KLARV+LFAA+NIPP+QELTYDYGYALDSV GP GKIKQMPC+CGA +CRKRLF
Sbjct: 231 DVKLARVMLFAADNIPPMQELTYDYGYALDSVSGPSGKIKQMPCYCGAADCRKRLF 285

The following BLAST results are available for this feature:

BLAST of Lsi05G004430 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SUVH4_ARATH	9.5e-46	72.41	Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 OS=Arabidopsis th...	[more]
SUVH6_ARATH	4.0e-28	61.80	Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 OS=Arabidopsis th...	[more]
SUVH5_ARATH	3.2e-25	53.93	Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 OS=Arabidopsis th...	[more]
STB1B_DANRE	1.2e-16	47.73	Histone-lysine N-methyltransferase SETDB1-B OS=Danio rerio GN=setdb1b PE=2 SV=2	[more]
SETB1_XENLA	1.6e-16	47.73	Histone-lysine N-methyltransferase SETDB1 OS=Xenopus laevis GN=setdb1 PE=2 SV=1	[more]

BLAST of Lsi05G004430 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC23_CUCSA	8.6e-62	96.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G599470 PE=4 SV=1	[more]
B9GNG0_POPTR	4.4e-50	82.76	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s23900g PE=4 SV=2	[more]
B9IA63_POPTR	9.8e-50	79.34	Histone-lysine N-methyltransferase family protein OS=Populus trichocarpa GN=POPT...	[more]
A0A067L3Q8_JATCU	6.4e-49	80.17	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26876 PE=4 SV=1	[more]
A0A061EKW7_THECC	1.1e-48	77.59	SET domain protein OS=Theobroma cacao GN=TCM_017347 PE=4 SV=1	[more]

BLAST of Lsi05G004430 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13960.1	5.3e-47	72.41	SU(VAR)3-9 homolog 4	[more]
AT2G22740.2	2.2e-29	61.80	SU(VAR)3-9 homolog 6	[more]
AT2G35160.1	1.8e-26	53.93	SU(VAR)3-9 homolog 5	[more]
AT1G73100.1	3.2e-15	38.46	SU(VAR)3-9 homolog 3	[more]
AT5G04940.1	3.5e-14	42.86	SU(VAR)3-9 homolog 1	[more]

BLAST of Lsi05G004430 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700203119\|gb\|KGN58252.1\|	1.2e-61	96.61	hypothetical protein Csa_3G599470 [Cucumis sativus]	[more]
gi\|659098129\|ref\|XP_008449991.1\|	1.2e-61	98.28	PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Cucum...	[more]
gi\|778681843\|ref\|XP_011651591.1\|	2.1e-61	98.28	PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Cucum...	[more]
gi\|743834312\|ref\|XP_011024754.1\|	2.8e-50	81.90	PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like [...	[more]
gi\|566159673\|ref\|XP_002301759.2\|	6.3e-50	82.76	hypothetical protein POPTR_0002s23900g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR003616	Post-SET_dom
IPR001214	SET_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0051567	histone H3-K9 methylation
biological_process	GO:0008150	biological_process
biological_process	GO:0006554	lysine catabolic process
biological_process	GO:0010216	maintenance of DNA methylation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005694	chromosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0018024	histone-lysine N-methyltransferase activity
molecular_function	GO:0042393	histone binding
molecular_function	GO:0046974	histone methyltransferase activity (H3-K9 specific)
molecular_function	GO:0008327	methyl-CpG binding
molecular_function	GO:0010428	methyl-CpNpG binding
molecular_function	GO:0010429	methyl-CpNpN binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0010385	double-stranded methylated DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G004430.1	Lsi05G004430.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001214	SET domain	PFAM	PF00856	SET	coord: 28..97 score: 6.9
IPR001214	SET domain	SMART	SM00317	set_7	coord: 5..103 score: 1.
IPR001214	SET domain	PROFILE	PS50280	SET	coord: 7..97 score: 13
IPR003616	Post-SET domain	SMART	SM00508	PostSET_3	coord: 111..127 score: 0.
IPR003616	Post-SET domain	PROFILE	PS50868	POST_SET	coord: 111..127 score:
None	No IPR available	GENE3D	G3DSA:2.170.270.10		coord: 16..126 score: 6.0
None	No IPR available	PANTHER	PTHR22884	SET DOMAIN PROTEINS	coord: 39..117 score: 5.0
None	No IPR available	PANTHER	PTHR22884:SF352	HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4	coord: 39..117 score: 5.0
None	No IPR available	unknown	SSF82199	SET domain	coord: 37..124 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G004430	Csa3G599470	Cucumber (Chinese Long) v2	culsiB214
Lsi05G004430	CSPI03G26280	Wild cucumber (PI 183967)	cpilsiB212
Lsi05G004430	MELO3C014780	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G004430	ClCG05G012620	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G004430	CsGy3G019780	Cucumber (Gy14) v2	cgyblsiB199
Lsi05G004430	CsaV3_3G019960	Cucumber (Chinese Long) v3	cuclsiB231

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G004430	Cucumber (Gy14) v1	cgylsiB248
Lsi05G004430	Cucurbita maxima (Rimu)	cmalsiB126
Lsi05G004430	Cucurbita maxima (Rimu)	cmalsiB249
Lsi05G004430	Cucurbita moschata (Rifu)	cmolsiB115
Lsi05G004430	Cucurbita moschata (Rifu)	cmolsiB237
Lsi05G004430	Cucurbita pepo (Zucchini)	cpelsiB511
Lsi05G004430	Cucurbita pepo (Zucchini)	cpelsiB553
Lsi05G004430	Watermelon (97103) v1	lsiwmB368
Lsi05G004430	Cucumber (Gy14) v2	cgyblsiB201
Lsi05G004430	Melon (DHL92) v3.6.1	lsimedB401
Lsi05G004430	Silver-seed gourd	carlsiB395
Lsi05G004430	Silver-seed gourd	carlsiB443
Lsi05G004430	Cucumber (Chinese Long) v3	cuclsiB233
Lsi05G004430	Watermelon (97103) v2	lsiwmbB329
Lsi05G004430	Wax gourd	lsiwgoB436