Lsi05G004400 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G004400
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Aminopeptidase
Location	chr05 : 5637293 .. 5638466 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGTGACTAATGTTACTTATTTTCTAGACTCTAGCTCTATATTGCTTCAAAGAATTAGTATTGCATTTCCCCATTACCCCTTGAGCTAGTGCCAACTTATCTCCGATTTCCTGTAGGTTTCAGGGTAGTTTAGTGTCATATCAGAGCCTAATCACAAGCTGCGTGTATGACAAACAACTAGACAGTGGAAGGGGCACTCTTCTTCACTTGTGTGACGAAGTTATTCAGCAAGAAGTAAGTAGCACTCTCTCTCTGCCACAGGATAGGGAGTATTAGTTGCTTTAGAATCTTTCCACACTTCGTGGGAAAAGGTTACTTTATGGCAGTGAAAGATCTATTTGCTCATAGTCAAGTTTAATTTAAACGAATAGTATTCTTTATTACTAAAAGTTTGAAATAACTATTCAAAGTAGGGGTACAAAAAACATAATAAAAGATTTATCCTTCGAACTCCTTTTGATATATTACTGTAGATACAAATATAGTATAGAAGATAGATATAGAATTGATTGTAGCATAGATTAGCTTTGTTTGCAGCTCCTAGTGGAGGAAGATATCTTTCATCTAGTCCTCATTCTGAATGCTATTTTTGGTGTACGTTACACGTGGCTTTCATTCCCACTTCTCTGTTAACTTTCAGGTAAAGGAGGTGATTATTTCCTTCTATATATTGATGAAACAGGGAAAGGCGACGAAACAGGTGCTTACACAAAACCTTGTTCCTCTTTAGACTCACGCTATGATGCGGAGGAGTGAGTGGTTGCATTATATTTCACGACTCACAGAAGCGATCATGAATGAATAAGGCGTTGTCTATTGATGCTTTACTTATTTTCTGTGGTTATGTAAGCAGGAGCTTGACATGCGGTGTGAGGAGCTGATTCAAAGACAGTTTGATCAGAGCTGTAATTTTGACGTGGATGATGCAATTCACAAGTTAGAGAAGTTGGGGATCGTTGTCCGGGTGAGAACTTATCTCGAGCAGAAGAGAATTTCTACTCATGTTGTTTAATGTCTTCCTATGCCTTCTCTAACTTGGAAAAGAACCAAACACAGGGTGCGGATGGGTTATATTCCTGTGTAGATTTGAGGAGTGCCAACAAGATCATAGGCATCACCACAGAGGAGATAGTTTCCAAAGCAAAAGAAAGCGATGCCTCCACTACTTGA

mRNA sequence

ATGGGTGGTAGTTTAGTGTCATATCAGAGCCTAATCACAAGCTGCGTGTATGACAAACAACTAGACAGTGGAAGGGGCACTCTTCTTCACTTGTGTGACGAAGTTATTCAGCAAGAACTCCTAGTGGAGGAAGATATCTTTCATCTAGTCCTCATTCTGAATGCTATTTTTGGTGTAAAGGAGGTGATTATTTCCTTCTATATATTGATGAAACAGGGAAAGGCGACGAAACAGGAGCTTGACATGCGGTGTGAGGAGCTGATTCAAAGACAGTTTGATCAGAGCTGTAATTTTGACGTGGATGATGCAATTCACAAGTTAGAGAAGTTGGGGATCGTTGTCCGGGGTGCGGATGGGTTATATTCCTGTGTAGATTTGAGGAGTGCCAACAAGATCATAGGCATCACCACAGAGGAGATAGTTTCCAAAGCAAAAGAAAGCGATGCCTCCACTACTTGA

Coding sequence (CDS)

ATGGGTGGTAGTTTAGTGTCATATCAGAGCCTAATCACAAGCTGCGTGTATGACAAACAACTAGACAGTGGAAGGGGCACTCTTCTTCACTTGTGTGACGAAGTTATTCAGCAAGAACTCCTAGTGGAGGAAGATATCTTTCATCTAGTCCTCATTCTGAATGCTATTTTTGGTGTAAAGGAGGTGATTATTTCCTTCTATATATTGATGAAACAGGGAAAGGCGACGAAACAGGAGCTTGACATGCGGTGTGAGGAGCTGATTCAAAGACAGTTTGATCAGAGCTGTAATTTTGACGTGGATGATGCAATTCACAAGTTAGAGAAGTTGGGGATCGTTGTCCGGGGTGCGGATGGGTTATATTCCTGTGTAGATTTGAGGAGTGCCAACAAGATCATAGGCATCACCACAGAGGAGATAGTTTCCAAAGCAAAAGAAAGCGATGCCTCCACTACTTGA

Protein sequence

MGGSLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVIISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDAIHKLEKLGIVVRGADGLYSCVDLRSANKIIGITTEEIVSKAKESDASTT

Homology

[Close]

BLAST of Lsi05G004400 vs. TrEMBL
Match: B9RGW4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1444990 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-42
Identity = 93/145 (64.14%), Postives = 110/145 (75.86%), Query Frame = 1


Query: 4   SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVI 63
           +LVSYQSLIT  VYDKQLDSGRGTLLHLCD+VIQQE                   VKEVI
Sbjct: 357 NLVSYQSLITQSVYDKQLDSGRGTLLHLCDDVIQQE-------------------VKEVI 416

Query: 64  ISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDAIHKLEKLGIVVRGADGLYSC 123
           +SF++LM+QG A++QELD RCE+LI+++F +SCNFDVDDA+ KLEKLGIV +   G Y+C
Sbjct: 417 VSFFVLMEQGIASRQELDQRCEDLIKQEFGESCNFDVDDAVQKLEKLGIVAKDTSGSYAC 476

Query: 124 VDLRSANKIIGITTEEIVSKAKESD 149
           VDLR AN IIG TTEEIV KAK+ D
Sbjct: 477 VDLRDANDIIGTTTEEIVLKAKQGD 482

[Close]

BLAST of Lsi05G004400 vs. TrEMBL
Match: B9IA69_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s14140g PE=4 SV=2)

HSP 1 Score: 177.9 bits (450), Expect = 9.0e-42
Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 1


Query: 4   SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVI 63
           +LVSYQSLIT  VYDKQLDSGRGTLLHLCD+VIQQE                   VKEVI
Sbjct: 359 NLVSYQSLITQSVYDKQLDSGRGTLLHLCDDVIQQE-------------------VKEVI 418

Query: 64  ISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDAIHKLEKLGIVVRGADGLYSC 123
           +SF+ILM QGKAT+QELD RCEELI  +F++ CNFDVDDA+ KL+KLGIV +   G Y+C
Sbjct: 419 VSFFILMVQGKATRQELDQRCEELITEEFNEKCNFDVDDALQKLQKLGIVAKDPAGKYAC 478

Query: 124 VDLRSANKIIGITTEEIVSKAKESDAS 151
            DL+ AN+IIG TTEE+V KA + D+S
Sbjct: 479 TDLKHANEIIGTTTEELVLKANQGDSS 486

[Close]

BLAST of Lsi05G004400 vs. TrEMBL
Match: A0A067LBJ5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26883 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.0e-41
Identity = 92/148 (62.16%), Postives = 112/148 (75.68%), Query Frame = 1


Query: 4   SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVI 63
           +L +YQ+LIT  +YDKQLDSGRGTLLHLCD+VIQQE                   VKEVI
Sbjct: 359 NLATYQNLITQSMYDKQLDSGRGTLLHLCDDVIQQE-------------------VKEVI 418

Query: 64  ISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDAIHKLEKLGIVVRGADGLYSC 123
           ISF+ILM+QGKAT Q+LD+RCEELIQ +F +SCNFDVDDA+HKLEKLGIV R + G Y C
Sbjct: 419 ISFFILMEQGKATLQDLDLRCEELIQEEFGESCNFDVDDAVHKLEKLGIVSRDSLGRYFC 478

Query: 124 VDLRSANKIIGITTEEIVSKAKESDAST 152
           V L+ AN+IIG TTEE++ KAK+  ++T
Sbjct: 479 VGLKRANEIIGTTTEELILKAKQGVSTT 487

[Close]

BLAST of Lsi05G004400 vs. TrEMBL
Match: B9GNF9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s23870g PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.0e-40
Identity = 91/148 (61.49%), Postives = 112/148 (75.68%), Query Frame = 1


Query: 4   SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVI 63
           +L +YQ+LIT  +YDKQLDSGRGTLLHLCD+VIQQE                   VKEVI
Sbjct: 358 NLAAYQNLITQSMYDKQLDSGRGTLLHLCDDVIQQE-------------------VKEVI 417

Query: 64  ISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDAIHKLEKLGIVVRGADGLYSC 123
           ISF+ILM+QGKAT+Q+LD+RCEELI+ +F +SCNFDVDDA+ KLEKLGIV R + G Y C
Sbjct: 418 ISFFILMEQGKATRQDLDLRCEELIKEEFGESCNFDVDDAVEKLEKLGIVARDSLGRYFC 477

Query: 124 VDLRSANKIIGITTEEIVSKAKESDAST 152
           V L+ AN+IIG TTEE+V KAK+  A++
Sbjct: 478 VGLKRANEIIGTTTEELVLKAKQGFANS 486

[Close]

BLAST of Lsi05G004400 vs. TrEMBL
Match: V4U2S9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015078mg PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-40
Identity = 88/148 (59.46%), Postives = 112/148 (75.68%), Query Frame = 1


Query: 4   SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVI 63
           ++ +YQ++IT  +YDKQLDSG+GTLLHLCD+VIQQE                   VKEVI
Sbjct: 355 NMAAYQNMITQSMYDKQLDSGKGTLLHLCDDVIQQE-------------------VKEVI 414

Query: 64  ISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDAIHKLEKLGIVVRGADGLYSC 123
           ISF+ILM+QGKAT+Q+LD+RCEELI+ +F +SCNFDVDDA+HKLEKLGIV R   G Y C
Sbjct: 415 ISFFILMEQGKATRQDLDLRCEELIKEEFGESCNFDVDDAVHKLEKLGIVARDTIGRYYC 474

Query: 124 VDLRSANKIIGITTEEIVSKAKESDAST 152
           V L+ AN+IIG TTEE+V KA++  ++T
Sbjct: 475 VGLKRANEIIGTTTEEMVLKAQQGISTT 483

[Close]

BLAST of Lsi05G004400 vs. TAIR10
Match: AT3G19340.1 (AT3G19340.1 Protein of unknown function (DUF3754))

HSP 1 Score: 163.3 bits (412), Expect = 1.2e-40
Identity = 84/143 (58.74%), Postives = 104/143 (72.73%), Query Frame = 1


Query: 4   SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVI 63
           ++ +YQ+LIT  +YDKQLDSGRGTLLHLCD+VIQQE                   VKEV+
Sbjct: 359 NMATYQNLITQSMYDKQLDSGRGTLLHLCDDVIQQE-------------------VKEVM 418

Query: 64  ISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDAIHKLEKLGIVVRGADGLYSC 123
           I FYILM+QGKAT ++LD+RCEELI+ +F   CNFDV+DA+ KLEKLGIV R   G Y C
Sbjct: 419 ICFYILMEQGKATLEDLDLRCEELIKEEFGARCNFDVEDAVQKLEKLGIVARDTIGRYYC 478

Query: 124 VDLRSANKIIGITTEEIVSKAKE 147
           + L+ AN+IIG TTEE+V KAK+
Sbjct: 479 MGLKRANEIIGTTTEELVLKAKQ 482

[Close]

BLAST of Lsi05G004400 vs. TAIR10
Match: AT5G13940.1 (AT5G13940.1 aminopeptidases)

HSP 1 Score: 156.4 bits (394), Expect = 1.4e-38
Identity = 84/144 (58.33%), Postives = 106/144 (73.61%), Query Frame = 1


Query: 4   SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVI 63
           +LV YQSLIT  VYDKQLDSGRGTLLHLCDEVIQQE                   VKEVI
Sbjct: 644 NLVDYQSLITRSVYDKQLDSGRGTLLHLCDEVIQQE-------------------VKEVI 703

Query: 64  ISFYILMKQGKAT-KQELDMRCEELIQRQFDQSCNFDVDDAIHKLEKLGIVVRGADGLYS 123
           ISF++L+K+G  T K+ELDM+ E  I+ +F++SCNFDVDDAI KLEKLG+V R ++  Y 
Sbjct: 704 ISFFMLIKKGCPTSKEELDMKSEAFIKEEFNESCNFDVDDAITKLEKLGLVSRDSEDKYR 763

Query: 124 CVDLRSANKIIGITTEEIVSKAKE 147
           CV+++ AN+I+G TTEE+V KA++
Sbjct: 764 CVEMKEANEIMGTTTEEMVLKARQ 768

[Close]

BLAST of Lsi05G004400 vs. NCBI nr
Match: gi|255543521|ref|XP_002512823.1| (PREDICTED: uncharacterized protein LOC8273088 isoform X1 [Ricinus communis])

HSP 1 Score: 180.6 bits (457), Expect = 2.0e-42
Identity = 93/145 (64.14%), Postives = 110/145 (75.86%), Query Frame = 1


Query: 4   SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVI 63
           +LVSYQSLIT  VYDKQLDSGRGTLLHLCD+VIQQE                   VKEVI
Sbjct: 357 NLVSYQSLITQSVYDKQLDSGRGTLLHLCDDVIQQE-------------------VKEVI 416

Query: 64  ISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDAIHKLEKLGIVVRGADGLYSC 123
           +SF++LM+QG A++QELD RCE+LI+++F +SCNFDVDDA+ KLEKLGIV +   G Y+C
Sbjct: 417 VSFFVLMEQGIASRQELDQRCEDLIKQEFGESCNFDVDDAVQKLEKLGIVAKDTSGSYAC 476

Query: 124 VDLRSANKIIGITTEEIVSKAKESD 149
           VDLR AN IIG TTEEIV KAK+ D
Sbjct: 477 VDLRDANDIIGTTTEEIVLKAKQGD 482

[Close]

BLAST of Lsi05G004400 vs. NCBI nr
Match: gi|743924044|ref|XP_011006135.1| (PREDICTED: uncharacterized protein LOC105112218 [Populus euphratica])

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-41
Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 1


Query: 4   SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVI 63
           +LVSYQSLIT  VYDKQLDSGRGTLLHLCD+VIQQE                   VKEVI
Sbjct: 361 NLVSYQSLITQSVYDKQLDSGRGTLLHLCDDVIQQE-------------------VKEVI 420

Query: 64  ISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDAIHKLEKLGIVVRGADGLYSC 123
           +SF+ILM QGKAT+QELD RCEELI  +F++ CNFDVDDA+ KL+KLGIV +   G Y+C
Sbjct: 421 VSFFILMVQGKATRQELDQRCEELITEEFNEKCNFDVDDALQKLQKLGIVAKDPAGKYAC 480

Query: 124 VDLRSANKIIGITTEEIVSKAKESDAS 151
            DL+ AN+IIG TTEE+V KA + D+S
Sbjct: 481 TDLKHANEIIGTTTEELVLKANQGDSS 488

[Close]

BLAST of Lsi05G004400 vs. NCBI nr
Match: gi|566204221|ref|XP_002320423.2| (hypothetical protein POPTR_0014s14140g [Populus trichocarpa])

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-41
Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 1


Query: 4   SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVI 63
           +LVSYQSLIT  VYDKQLDSGRGTLLHLCD+VIQQE                   VKEVI
Sbjct: 359 NLVSYQSLITQSVYDKQLDSGRGTLLHLCDDVIQQE-------------------VKEVI 418

Query: 64  ISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDAIHKLEKLGIVVRGADGLYSC 123
           +SF+ILM QGKAT+QELD RCEELI  +F++ CNFDVDDA+ KL+KLGIV +   G Y+C
Sbjct: 419 VSFFILMVQGKATRQELDQRCEELITEEFNEKCNFDVDDALQKLQKLGIVAKDPAGKYAC 478

Query: 124 VDLRSANKIIGITTEEIVSKAKESDAS 151
            DL+ AN+IIG TTEE+V KA + D+S
Sbjct: 479 TDLKHANEIIGTTTEELVLKANQGDSS 486

[Close]

BLAST of Lsi05G004400 vs. NCBI nr
Match: gi|802564657|ref|XP_012067368.1| (PREDICTED: uncharacterized protein LOC105630224 [Jatropha curcas])

HSP 1 Score: 177.2 bits (448), Expect = 2.2e-41
Identity = 91/148 (61.49%), Postives = 112/148 (75.68%), Query Frame = 1


Query: 4   SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVI 63
           +LVSYQSLIT  VYDKQLDSGRGTLLHLCD+VIQQE                   VKEVI
Sbjct: 357 NLVSYQSLITQSVYDKQLDSGRGTLLHLCDDVIQQE-------------------VKEVI 416

Query: 64  ISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDAIHKLEKLGIVVRGADGLYSC 123
           ISF+ILM+QG+AT+QELD+RCE+LI++ F + CNFDVDDA+ KLEKLGIV +   G Y+C
Sbjct: 417 ISFFILMQQGQATRQELDLRCEDLIKQDFGEDCNFDVDDAVQKLEKLGIVTQDTAGNYAC 476

Query: 124 VDLRSANKIIGITTEEIVSKAKESDAST 152
           VD++ AN+IIG TTEE+V KA+  + S+
Sbjct: 477 VDIKQANEIIGTTTEEVVLKARHGNISS 485

[Close]

BLAST of Lsi05G004400 vs. NCBI nr
Match: gi|802564642|ref|XP_012067365.1| (PREDICTED: uncharacterized protein LOC105630221 [Jatropha curcas])

HSP 1 Score: 176.8 bits (447), Expect = 2.9e-41
Identity = 92/148 (62.16%), Postives = 112/148 (75.68%), Query Frame = 1


Query: 4   SLVSYQSLITSCVYDKQLDSGRGTLLHLCDEVIQQELLVEEDIFHLVLILNAIFGVKEVI 63
           +L +YQ+LIT  +YDKQLDSGRGTLLHLCD+VIQQE                   VKEVI
Sbjct: 359 NLATYQNLITQSMYDKQLDSGRGTLLHLCDDVIQQE-------------------VKEVI 418

Query: 64  ISFYILMKQGKATKQELDMRCEELIQRQFDQSCNFDVDDAIHKLEKLGIVVRGADGLYSC 123
           ISF+ILM+QGKAT Q+LD+RCEELIQ +F +SCNFDVDDA+HKLEKLGIV R + G Y C
Sbjct: 419 ISFFILMEQGKATLQDLDLRCEELIQEEFGESCNFDVDDAVHKLEKLGIVSRDSLGRYFC 478

Query: 124 VDLRSANKIIGITTEEIVSKAKESDAST 152
           V L+ AN+IIG TTEE++ KAK+  ++T
Sbjct: 479 VGLKRANEIIGTTTEELILKAKQGVSTT 487

The following BLAST results are available for this feature:

BLAST of Lsi05G004400 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G004400 vs. TrEMBL


Match Name	E-value	Identity	Description
B9RGW4_RICCO	1.4e-42	64.14	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1444990 PE=4 SV=1	[more]
B9IA69_POPTR	9.0e-42	62.59	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s14140g PE=4 SV=2	[more]
A0A067LBJ5_JATCU	2.0e-41	62.16	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26883 PE=4 SV=1	[more]
B9GNF9_POPTR	1.0e-40	61.49	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s23870g PE=4 SV=1	[more]
V4U2S9_9ROSI	2.2e-40	59.46	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015078mg PE=4 SV=1	[more]

BLAST of Lsi05G004400 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19340.1	1.2e-40	58.74	Protein of unknown function (DUF3754)	[more]
AT5G13940.1	1.4e-38	58.33	aminopeptidases	[more]

BLAST of Lsi05G004400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|255543521\|ref\|XP_002512823.1\|	2.0e-42	64.14	PREDICTED: uncharacterized protein LOC8273088 isoform X1 [Ricinus communis]	[more]
gi\|743924044\|ref\|XP_011006135.1\|	1.3e-41	62.59	PREDICTED: uncharacterized protein LOC105112218 [Populus euphratica]	[more]
gi\|566204221\|ref\|XP_002320423.2\|	1.3e-41	62.59	hypothetical protein POPTR_0014s14140g [Populus trichocarpa]	[more]
gi\|802564657\|ref\|XP_012067368.1\|	2.2e-41	61.49	PREDICTED: uncharacterized protein LOC105630224 [Jatropha curcas]	[more]
gi\|802564642\|ref\|XP_012067365.1\|	2.9e-41	62.16	PREDICTED: uncharacterized protein LOC105630221 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G004400.1	Lsi05G004400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33645	FAMILY NOT NAMED	coord: 8..39 score: 2.1E-55coord: 59..152 score: 2.1
None	No IPR available	PANTHER	PTHR33645:SF3	SUBFAMILY NOT NAMED	coord: 8..39 score: 2.1E-55coord: 59..152 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G004400	Csa3G599990	Cucumber (Chinese Long) v2	culsiB214
Lsi05G004400	CSPI03G26340	Wild cucumber (PI 183967)	cpilsiB212
Lsi05G004400	Cucsa.155960	Cucumber (Gy14) v1	cgylsiB248
Lsi05G004400	CmaCh11G015560	Cucurbita maxima (Rimu)	cmalsiB126
Lsi05G004400	CmaCh14G007700	Cucurbita maxima (Rimu)	cmalsiB249
Lsi05G004400	CmoCh14G007820	Cucurbita moschata (Rifu)	cmolsiB237
Lsi05G004400	CmoCh11G015660	Cucurbita moschata (Rifu)	cmolsiB115
Lsi05G004400	Cla003245	Watermelon (97103) v1	lsiwmB368
Lsi05G004400	MELO3C014774	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G004400	ClCG05G012580	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G004400	MELO3C014774.2	Melon (DHL92) v3.6.1	lsimedB401
Lsi05G004400	Cla97C05G094310	Watermelon (97103) v2	lsiwmbB329
Lsi05G004400	Bhi01G001522	Wax gourd	lsiwgoB436
Lsi05G004400	Cp4.1LG04g06340	Cucurbita pepo (Zucchini)	cpelsiB553
Lsi05G004400	Cp4.1LG03g06620	Cucurbita pepo (Zucchini)	cpelsiB511
Lsi05G004400	CsGy3G024620	Cucumber (Gy14) v2	cgyblsiB201
Lsi05G004400	Carg25300	Silver-seed gourd	carlsiB443
Lsi05G004400	CsaV3_3G027810	Cucumber (Chinese Long) v3	cuclsiB233

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G004400	Cucumber (Gy14) v2	cgyblsiB199
Lsi05G004400	Cucumber (Chinese Long) v3	cuclsiB231