Lsi05G004320 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGAGAATGATGGGTTTGGTGTGTGGTGGAATATAAAATGGGCGCCGTTGCTATGCCATTGGCCCCGCTGAAATCTCTCTCTTCTTTCCCTTTCCTTTCCATTTTCCATTTTCTCTCTTTCCTTCTTCACAATACCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCTTGATTTCTCCTCCCTTTTTCTTCTCTTTCTTCTTCAGATACAGACATTGAAGGCGTCACATTCAAGGCTTCAACCTGTCAATTGAAACGCCCATTCAATGCTCTCTCACTTCCACAAACCTCCATTTATTACACCCCTTTCAGTTTCTGTTTCCGTTCCTACCATTCCCCTGCATGCCTCTCCGTTTTTGCATCTTTCACTGACCCCATTTTGCACCGCCGCTTGATTCTTTCGCCGTTTCCCCAATTTCTCTAATACCCACCAGGTTGATTTTCCATTTCATTCCATTTTTATGCAATTTCCCTTCCCATCCCATTTCTCATCTCAATCTCTTCTCCTTTCTTTCTCTTTAGCCAGGAGGATTACCCATTCGCTTTAATTATGTCTGCGGTGTTAGCAAGAACAGGGCGACATCGTCAGCGATACGACGATCATTTTCGTCTTGTTTCAGGGTATTCTTCTCTAATTCTTGGCTATTTCGTCGCATTCTTCTTTGTCTTCTTCCCTTTTGTTTCTACTTGACTTTTAGCCTGTTATTTCTTTTCCTCATCTTTAATCATTATGAATAGTCAGTCTCGTTTCCTTTACAAATTCCTTAGTTTAAAATTACCCATTTGAATTAGTTTTGTGTGCTTCTCAAATTTCTCCGCTACTGATATGCTTTTCGCTTATCTCAAATTGAAATTATTGTTGTATCTTTCTGGTACAGCGATCAATATATTATTTATATTTACTTATTTTATTGTATTTCCATGGTGGGTCTTCTTATTGACTTCTGTTACATGAACAACAAAAGGGGTTTCGCTATCTATTTTGTCTCTTTTGTGGAAATCGTTAACCACTGCACGCATATGACATATCAGAGTTATCAACGATACCCACTCTAATAACCTTTCGTTTGTGGGTAACGACGAATGGTTGTGGGCGTTTCAGATATAGGGGGAAAAAAGGAATTCTGTTGTTTTCAGTATGAATTTTGCCCAAAGCTGATTGCGGGCTGTGATTTGATGTTTCAATTTATGCTCCAAAAGTCTATGGGGGTAATTATGATATTTAAAACGTTTGGGTATCTTTCATTTTAATTGTTTATAATCTTACTCACGTCACAAATATTCTGGTACGCCTGCATTGGGATTGAATTGGGAAGCTGGGAAATGAGAAATTTGGGAATTAGATTGTTGAGGATGAGATGTATGTATTTCAAGTGTATAGAAGGAGTTTTGGATGATTGAAGATAAAAATTTTAGTATTATAAATGTTAGAATGGGAAAGATTCTCTGATATTATTTTGCTGTGGGTGTAAAAAGAAGATAACTACAAAAATTTGTTGTATATTAGAATTATATGATGAGAAGATGACAGCGGAAGAGAGGAACAATTTCTAGACTGAAGAACAGGTGAATCAATCGTTGAATGATGTGATGTGGATGGTGGATTTGAGTTTCTATTTTTTTTTTCCTTTTCCGTCAGTAAAGTTGCTTTATGTAGTTATCCGCAATAGTTCAAAGATTTAACCTAATTCCCTAAATAGATAAAACGTATAATATGATTAATATAGAATTGTTTCCTTCCGATTATGGGTTGATTTATTTCTATTTTCTCATGACATTCCAAATTTCAAATTTTCTTGGATCTTGAATTTAAAAAATCTAAGTGTAATGTTGAATGTTTCCCCACACCAAATTCAGAGGTTTGCCTGCCTCCAGTTATGTAGAAGTTGAGTTCACGAATGGCAATGTGTTCTTTTAGTATTGAATGCAGTTTCATTTAGCATAATTTTGGGGATGGTATTGTAACTTAAATGAATTTAACTTAGCAATCGATCCTTATTTGTTGCTTAATTGTTGGCACATACACAACAGATGCATTCCTTATAGGCTGATAGAGGACAGCGATGAAGTCAACGAACAGTGTGACATTGAGAACAAGATTGAAGTTCTCATGGTGTCTTCCCCAAATCGTGATGACCTAGTGTTTCCAAAGGTTTATAATTTTATCCATTCTTGGTTGAAGATGTTGGCAAGAAATATCACTGTCCTATATTAATGTCTCTCCTTGTTCTTCTTTGTAGGGTGGATGGGAGGATGATGAGACCATCCTGGAAGCAGCATGTCGCGAAGCTGTGGAAGAAGCAGGAGTGAGAGGAAAGCTTAACGTAGGTTTATATATTGCTTCCTTGCAGAAATTAATGGTCTTTTTTTGCATGTTTTCTTCTCAAATATTGAACTATTTGCATCAAGGATTGTTGGTTGTAGAACCTTTCAGATGCTCGTCGATTGGTTGTCATAGGATGGGTTGCCATGTCATAGCCATAGGACCCCAGGCTAGGAATAACATAAGCAACTAGGCATCCCAGGAAATTTATACATCACTAATCTGCAGAAGGCATGAGCTGGATGCTGTTAGCACGTTATTGACTTCTTTTACAGCAAGACCCACACTCAGATGATATATTTGTGAAATTTGAAGTGAATGAAAACAAACATCTCGGTTGTGCTAAGTACTACGGGTAGTGTAGAGATGGAATGAAGGGGGTACCTCTTCCCCGATAATTTTTAATTATGTAAGACAATCTCAAAATAGAAAGATATGTTGAGGTTTAGGATGAAAAATAAAAATTGTCAATCCCTACCAAAATTTCTGGCTCAGTTAACCATTCACCACTTATGTTGAGGTTTACCCGAGTTTTGCTCGCAACTCGATTTATTGGAGTACTGATCGTTACAAAAGAAGAAAAAAGCTGATAGTATATTCTTTGTAGAACTACCATCCATTTTGACTTATTCGTAGGATACTCCATGCTTATTGTAACTCAGTCTACCACTGCAAAGACAGTATTCTTTCTTTCACTTGGAAAATAAAATTGCGTTATTTCTTTCTTTCAGGAAAATCCTCTTGGAGTTTGGGAGTTTAGAAGCAAAAGCAGTCAGGACATTTGCAGCATGGAGGGAGCTTGCAGAGGATACATGTTTGCATTAGAAGTTACAGAAGAGCTTGAGTCATGGCCAGAGCAGGGAAACCGCCATAGGAGATGGGTAAGTATATACTTACTGTGAAACTAACTTCCTTAAATTGTTGATAAGATGCCATTTCAGCACTCTTTGAAAAATCATTTTCTAGAGACTGGTTTTTAACCCTGCCAATAATGAGAAGAAAACTGATTCGCAGCTCAATGTTAAAGAGGCATTCAGACTGTGCCGGTACGAATGGATGCGCGTGGCACTTGAAGCGTTTCTCCGAGTAATGGCGGGAGACGAAAATGGTGAAACTATGCAAGAAACAGGAGAGACAACCGCAGTAACAGTTTCAAATGTGGTTGATTGTGCATTGATATCATCTAACTGCTGTGGAAGGCCTCCTCCTTTCAGTCAGCAGCACGGTAGTAGGAGTCATTCAACAGGCATAGGAGGCATTTCAAGGGATTGCAGACTAGGTATTACATTAACTGAATGA GGAGAATGATGGGTTTGGTGTGTGGTGGAATATAAAATGGGCGCCGTTGCTATGCCATTGGCCCCGCTGAAATCTCTCTCTTCTTTCCCTTTCCTTTCCATTTTCCATTTTCTCTCTTTCCTTCTTCACAATACCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCTTGATTTCTCCTCCCTTTTTCTTCTCTTTCTTCTTCAGATACAGACATTGAAGGCGTCACATTCAAGGCTTCAACCTGTCAATTGAAACGCCCATTCAATGCTCTCTCACTTCCACAAACCTCCATTTATTACACCCCTTTCAGTTTCTGTTTCCGTTCCTACCATTCCCCTGCATGCCTCTCCGTTTTTGCATCTTTCACTGACCCCATTTTGCACCGCCGCTTGATTCTTTCGCCGTTTCCCCAATTTCTCTAATACCCACCAGCCAGGAGGATTACCCATTCGCTTTAATTATGTCTGCGGTGTTAGCAAGAACAGGGCGACATCGTCAGCGATACGACGATCATTTTCGTCTTGTTTCAGGATGCATTCCTTATAGGCTGATAGAGGACAGCGATGAAGTCAACGAACAGTGTGACATTGAGAACAAGATTGAAGTTCTCATGGTGTCTTCCCCAAATCGTGATGACCTAGTGTTTCCAAAGGGTGGATGGGAGGATGATGAGACCATCCTGGAAGCAGCATGTCGCGAAGCTGTGGAAGAAGCAGGAGTGAGAGGAAAGCTTAACGAAAATCCTCTTGGAGTTTGGGAGTTTAGAAGCAAAAGCAGTCAGGACATTTGCAGCATGGAGGGAGCTTGCAGAGGATACATGTTTGCATTAGAAGTTACAGAAGAGCTTGAGTCATGGCCAGAGCAGGGAAACCGCCATAGGAGATGGAGACTGGTTTTTAACCCTGCCAATAATGAGAAGAAAACTGATTCGCAGCTCAATGTTAAAGAGGCATTCAGACTGTGCCGGTACGAATGGATGCGCGTGGCACTTGAAGCGTTTCTCCGAGTAATGGCGGGAGACGAAAATGGTGAAACTATGCAAGAAACAGGAGAGACAACCGCAGTAACAGTTTCAAATGTGGTTGATTGTGCATTGATATCATCTAACTGCTGTGGAAGGCCTCCTCCTTTCAGTCAGCAGCACGGTAGTAGGAGTCATTCAACAGGCATAGGAGGCATTTCAAGGGATTGCAGACTAGGTATTACATTAACTGAATGA ATGTCTGCGGTGTTAGCAAGAACAGGGCGACATCGTCAGCGATACGACGATCATTTTCGTCTTGTTTCAGGATGCATTCCTTATAGGCTGATAGAGGACAGCGATGAAGTCAACGAACAGTGTGACATTGAGAACAAGATTGAAGTTCTCATGGTGTCTTCCCCAAATCGTGATGACCTAGTGTTTCCAAAGGGTGGATGGGAGGATGATGAGACCATCCTGGAAGCAGCATGTCGCGAAGCTGTGGAAGAAGCAGGAGTGAGAGGAAAGCTTAACGAAAATCCTCTTGGAGTTTGGGAGTTTAGAAGCAAAAGCAGTCAGGACATTTGCAGCATGGAGGGAGCTTGCAGAGGATACATGTTTGCATTAGAAGTTACAGAAGAGCTTGAGTCATGGCCAGAGCAGGGAAACCGCCATAGGAGATGGAGACTGGTTTTTAACCCTGCCAATAATGAGAAGAAAACTGATTCGCAGCTCAATGTTAAAGAGGCATTCAGACTGTGCCGGTACGAATGGATGCGCGTGGCACTTGAAGCGTTTCTCCGAGTAATGGCGGGAGACGAAAATGGTGAAACTATGCAAGAAACAGGAGAGACAACCGCAGTAACAGTTTCAAATGTGGTTGATTGTGCATTGATATCATCTAACTGCTGTGGAAGGCCTCCTCCTTTCAGTCAGCAGCACGGTAGTAGGAGTCATTCAACAGGCATAGGAGGCATTTCAAGGGATTGCAGACTAGGTATTACATTAACTGAATGA MSAVLARTGRHRQRYDDHFRLVSGCIPYRLIEDSDEVNEQCDIENKIEVLMVSSPNRDDLVFPKGGWEDDETILEAACREAVEEAGVRGKLNENPLGVWEFRSKSSQDICSMEGACRGYMFALEVTEELESWPEQGNRHRRWRLVFNPANNEKKTDSQLNVKEAFRLCRYEWMRVALEAFLRVMAGDENGETMQETGETTAVTVSNVVDCALISSNCCGRPPPFSQQHGSRSHSTGIGGISRDCRLGITLTE
BLAST of Lsi05G004320 vs. Swiss-Prot
Match: NUD13_ARATH (Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana GN=NUDT13 PE=1 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 4.7e-65 Identity = 125/198 (63.13%), Postives = 147/198 (74.24%), Query Frame = 1
BLAST of Lsi05G004320 vs. Swiss-Prot
Match: NUD12_ARATH (Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana GN=NUDT12 PE=2 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 9.9e-63 Identity = 124/197 (62.94%), Postives = 141/197 (71.57%), Query Frame = 1
BLAST of Lsi05G004320 vs. Swiss-Prot
Match: NUD16_ARATH (Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana GN=NUDT16 PE=2 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 3.8e-38 Identity = 86/177 (48.59%), Postives = 112/177 (63.28%), Query Frame = 1
BLAST of Lsi05G004320 vs. Swiss-Prot
Match: NUDT4_ARATH (Nudix hydrolase 4 OS=Arabidopsis thaliana GN=NUDT4 PE=1 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 6.5e-30 Identity = 82/190 (43.16%), Postives = 112/190 (58.95%), Query Frame = 1
BLAST of Lsi05G004320 vs. Swiss-Prot
Match: NUD18_ARATH (Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana GN=NUDT18 PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 7.2e-29 Identity = 83/197 (42.13%), Postives = 104/197 (52.79%), Query Frame = 1
BLAST of Lsi05G004320 vs. TrEMBL
Match: A0A0A0LBD3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G601030 PE=4 SV=1) HSP 1 Score: 459.1 bits (1180), Expect = 3.4e-126 Identity = 224/253 (88.54%), Postives = 229/253 (90.51%), Query Frame = 1
BLAST of Lsi05G004320 vs. TrEMBL
Match: A0A067L0D1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26895 PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 5.6e-73 Identity = 139/222 (62.61%), Postives = 170/222 (76.58%), Query Frame = 1
BLAST of Lsi05G004320 vs. TrEMBL
Match: B9RGV1_RICCO (Diphosphoinositol polyphosphate phosphohydrolase, putative OS=Ricinus communis GN=RCOM_1444060 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 4.8e-72 Identity = 138/222 (62.16%), Postives = 168/222 (75.68%), Query Frame = 1
BLAST of Lsi05G004320 vs. TrEMBL
Match: V4TIC7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016552mg PE=4 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 8.1e-72 Identity = 139/228 (60.96%), Postives = 172/228 (75.44%), Query Frame = 1
BLAST of Lsi05G004320 vs. TrEMBL
Match: A0A067F802_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027123mg PE=4 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 1.8e-71 Identity = 138/228 (60.53%), Postives = 172/228 (75.44%), Query Frame = 1
BLAST of Lsi05G004320 vs. TAIR10
Match: AT3G26690.1 (AT3G26690.1 nudix hydrolase homolog 13) HSP 1 Score: 249.2 bits (635), Expect = 2.7e-66 Identity = 125/198 (63.13%), Postives = 147/198 (74.24%), Query Frame = 1
BLAST of Lsi05G004320 vs. TAIR10
Match: AT1G12880.1 (AT1G12880.1 nudix hydrolase homolog 12) HSP 1 Score: 241.5 bits (615), Expect = 5.6e-64 Identity = 124/197 (62.94%), Postives = 141/197 (71.57%), Query Frame = 1
BLAST of Lsi05G004320 vs. TAIR10
Match: AT3G12600.1 (AT3G12600.1 nudix hydrolase homolog 16) HSP 1 Score: 159.8 bits (403), Expect = 2.1e-39 Identity = 86/177 (48.59%), Postives = 112/177 (63.28%), Query Frame = 1
BLAST of Lsi05G004320 vs. TAIR10
Match: AT1G18300.1 (AT1G18300.1 nudix hydrolase homolog 4) HSP 1 Score: 132.5 bits (332), Expect = 3.6e-31 Identity = 82/190 (43.16%), Postives = 112/190 (58.95%), Query Frame = 1
BLAST of Lsi05G004320 vs. TAIR10
Match: AT1G14860.1 (AT1G14860.1 nudix hydrolase homolog 18) HSP 1 Score: 129.0 bits (323), Expect = 4.0e-30 Identity = 83/197 (42.13%), Postives = 104/197 (52.79%), Query Frame = 1
BLAST of Lsi05G004320 vs. NCBI nr
Match: gi|778681856|ref|XP_011651595.1| (PREDICTED: nudix hydrolase 13, mitochondrial [Cucumis sativus]) HSP 1 Score: 459.1 bits (1180), Expect = 4.8e-126 Identity = 224/253 (88.54%), Postives = 229/253 (90.51%), Query Frame = 1
BLAST of Lsi05G004320 vs. NCBI nr
Match: gi|659098111|ref|XP_008449983.1| (PREDICTED: nudix hydrolase 13, mitochondrial [Cucumis melo]) HSP 1 Score: 453.0 bits (1164), Expect = 3.5e-124 Identity = 220/253 (86.96%), Postives = 227/253 (89.72%), Query Frame = 1
BLAST of Lsi05G004320 vs. NCBI nr
Match: gi|802564750|ref|XP_012067385.1| (PREDICTED: nudix hydrolase 13, mitochondrial [Jatropha curcas]) HSP 1 Score: 282.3 bits (721), Expect = 8.1e-73 Identity = 139/222 (62.61%), Postives = 170/222 (76.58%), Query Frame = 1
BLAST of Lsi05G004320 vs. NCBI nr
Match: gi|255543495|ref|XP_002512810.1| (PREDICTED: nudix hydrolase 12, mitochondrial [Ricinus communis]) HSP 1 Score: 279.3 bits (713), Expect = 6.8e-72 Identity = 138/222 (62.16%), Postives = 168/222 (75.68%), Query Frame = 1
BLAST of Lsi05G004320 vs. NCBI nr
Match: gi|568829234|ref|XP_006468932.1| (PREDICTED: nudix hydrolase 12, mitochondrial [Citrus sinensis]) HSP 1 Score: 279.3 bits (713), Expect = 6.8e-72 Identity = 139/228 (60.96%), Postives = 173/228 (75.88%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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