Lsi05G004290 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G004290
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Family of unknown function (DUF716)
Location	chr05 : 5458334 .. 5459284 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTATGATCTTCCATGTTTTCTCATCGTCGGCGCTGCTCTCGCTTGGCCTTTACCACATCGTCTCCGTTACCCTCAATTTCCTTAAATCTCCACAGTCCTACTCCGCCAGGCCTTACCATCCTTTCCCGCCGTCCTCCTCGCATCAGCTTCATCTTCCCCATCACCAACACCACCATCACTACGGTCTCCGGTACCTGCAACTCTATCTCTCAATCCCATGTCTCGTTATTGCCTTTGCCCATCAGGCCATTGTCGCCGCCGACCCTGATCCTCTCCTCAAGGGCAGCACCCCTGTCCACCATTTCATTTCCCTTCAATCCGCCGCCGTCATCTTCCTCTTCCTCATCCTAACTCTCGCCCTTCTCGTCTCTGACTCCACCTCTCTTCTCCCCCTCCCTTCCGATCTCTTCTTTGCCCTAGCCTCCGCTCTTTTCTTCTTGCAGTTCTCCGTTTCTTCCTCAGCTGCTTCTGTTCAGACCTCCGATCTTCAAGCCAAATGCGATTCCGTCTCTGGTCAAATCTCCGCCCTGGCCTCCTTCCTCTGCCTGGCCCTTGCTTGCTTGCCCAGGCTCTTCGTGGCTGATGTGGGTTTGGGGGCGACCTTCTTCCTCCAGGGCCTTTGGGTATTGCAGACGGGGCTTTCTCTCTATGTCGAAGCCTTCATTCCCGAAGGATGTCACAGGTTGCTGGATGTTGTGAGTGGTGTGGAGGGATCAACCAAGTGCGATTTGGAGGAATCCCGGCTCAGGGCTGTTGCCATTTTGGATCTGGCTTTTCTGATCCATGTTATGTTTGTTCTGCTCATTGTAATTGTCATTTATGCTGTCATTGCCAAGACTGTTGGCGTCCGGAGAGTTGGGTCTTACGAAGCTTTACCAGCTGCTGCTATTGGTGGGGATAACAATCATATACAGATGAAAGCATTGACGGGCACCCAGGCTTAA

mRNA sequence

ATGGCTGCTATGATCTTCCATGTTTTCTCATCGTCGGCGCTGCTCTCGCTTGGCCTTTACCACATCGTCTCCGTTACCCTCAATTTCCTTAAATCTCCACAGTCCTACTCCGCCAGGCCTTACCATCCTTTCCCGCCGTCCTCCTCGCATCAGCTTCATCTTCCCCATCACCAACACCACCATCACTACGGTCTCCGGTACCTGCAACTCTATCTCTCAATCCCATGTCTCGTTATTGCCTTTGCCCATCAGGCCATTGTCGCCGCCGACCCTGATCCTCTCCTCAAGGGCAGCACCCCTGTCCACCATTTCATTTCCCTTCAATCCGCCGCCGTCATCTTCCTCTTCCTCATCCTAACTCTCGCCCTTCTCGTCTCTGACTCCACCTCTCTTCTCCCCCTCCCTTCCGATCTCTTCTTTGCCCTAGCCTCCGCTCTTTTCTTCTTGCAGTTCTCCGTTTCTTCCTCAGCTGCTTCTGTTCAGACCTCCGATCTTCAAGCCAAATGCGATTCCGTCTCTGGTCAAATCTCCGCCCTGGCCTCCTTCCTCTGCCTGGCCCTTGCTTGCTTGCCCAGGCTCTTCGTGGCTGATGTGGGTTTGGGGGCGACCTTCTTCCTCCAGGGCCTTTGGGTATTGCAGACGGGGCTTTCTCTCTATGTCGAAGCCTTCATTCCCGAAGGATGTCACAGGTTGCTGGATGTTGTGAGTGGTGTGGAGGGATCAACCAAGTGCGATTTGGAGGAATCCCGGCTCAGGGCTGTTGCCATTTTGGATCTGGCTTTTCTGATCCATGTTATGTTTGTTCTGCTCATTGTAATTGTCATTTATGCTGTCATTGCCAAGACTGTTGGCGTCCGGAGAGTTGGGTCTTACGAAGCTTTACCAGCTGCTGCTATTGGTGGGGATAACAATCATATACAGATGAAAGCATTGACGGGCACCCAGGCTTAA

Coding sequence (CDS)

ATGGCTGCTATGATCTTCCATGTTTTCTCATCGTCGGCGCTGCTCTCGCTTGGCCTTTACCACATCGTCTCCGTTACCCTCAATTTCCTTAAATCTCCACAGTCCTACTCCGCCAGGCCTTACCATCCTTTCCCGCCGTCCTCCTCGCATCAGCTTCATCTTCCCCATCACCAACACCACCATCACTACGGTCTCCGGTACCTGCAACTCTATCTCTCAATCCCATGTCTCGTTATTGCCTTTGCCCATCAGGCCATTGTCGCCGCCGACCCTGATCCTCTCCTCAAGGGCAGCACCCCTGTCCACCATTTCATTTCCCTTCAATCCGCCGCCGTCATCTTCCTCTTCCTCATCCTAACTCTCGCCCTTCTCGTCTCTGACTCCACCTCTCTTCTCCCCCTCCCTTCCGATCTCTTCTTTGCCCTAGCCTCCGCTCTTTTCTTCTTGCAGTTCTCCGTTTCTTCCTCAGCTGCTTCTGTTCAGACCTCCGATCTTCAAGCCAAATGCGATTCCGTCTCTGGTCAAATCTCCGCCCTGGCCTCCTTCCTCTGCCTGGCCCTTGCTTGCTTGCCCAGGCTCTTCGTGGCTGATGTGGGTTTGGGGGCGACCTTCTTCCTCCAGGGCCTTTGGGTATTGCAGACGGGGCTTTCTCTCTATGTCGAAGCCTTCATTCCCGAAGGATGTCACAGGTTGCTGGATGTTGTGAGTGGTGTGGAGGGATCAACCAAGTGCGATTTGGAGGAATCCCGGCTCAGGGCTGTTGCCATTTTGGATCTGGCTTTTCTGATCCATGTTATGTTTGTTCTGCTCATTGTAATTGTCATTTATGCTGTCATTGCCAAGACTGTTGGCGTCCGGAGAGTTGGGTCTTACGAAGCTTTACCAGCTGCTGCTATTGGTGGGGATAACAATCATATACAGATGAAAGCATTGACGGGCACCCAGGCTTAA

Protein sequence

MAAMIFHVFSSSALLSLGLYHIVSVTLNFLKSPQSYSARPYHPFPPSSSHQLHLPHHQHHHHYGLRYLQLYLSIPCLVIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILTLALLVSDSTSLLPLPSDLFFALASALFFLQFSVSSSAASVQTSDLQAKCDSVSGQISALASFLCLALACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVEGSTKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAAIGGDNNHIQMKALTGTQA

Homology

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BLAST of Lsi05G004290 vs. TrEMBL
Match: A0A0A0LCA4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G251910 PE=4 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 2.6e-160
Identity = 308/316 (97.47%), Postives = 314/316 (99.37%), Query Frame = 1


Query: 1   MAAMIFHVFSSSALLSLGLYHIVSVTLNFLKSPQSYSARPYHPFPPSSSHQLHLPHHQHH 60
           MAAMI HVFSSSALLSLGLYHIVSVTLNFLKSPQSYS+RPYHPFPPSSSHQLH PHHQHH
Sbjct: 1   MAAMIIHVFSSSALLSLGLYHIVSVTLNFLKSPQSYSSRPYHPFPPSSSHQLHHPHHQHH 60

Query: 61  HHYGLRYLQLYLSIPCLVIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILT 120
           HHYGLRYLQLYLSIPCL+IAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILT
Sbjct: 61  HHYGLRYLQLYLSIPCLIIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILT 120

Query: 121 LALLVSDSTSLLPLPSDLFFALASALFFLQFSVSSSAASVQTSDLQAKCDSVSGQISALA 180
           LA+L+SDSTSLLPLPSDLFFALASALFFLQ+SVSSSAASVQTSDLQAKCDSVSG+ISALA
Sbjct: 121 LAILLSDSTSLLPLPSDLFFALASALFFLQYSVSSSAASVQTSDLQAKCDSVSGKISALA 180

Query: 181 SFLCLALACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVEG 240
           SFLCLALACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVEG
Sbjct: 181 SFLCLALACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVEG 240

Query: 241 STKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAAIG 300
           STKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAAIG
Sbjct: 241 STKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAAIG 300

Query: 301 GDNNHIQMKALTGTQA 317
           GDNNHIQMKALTGTQA
Sbjct: 301 GDNNHIQMKALTGTQA 316

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BLAST of Lsi05G004290 vs. TrEMBL
Match: V4W2G1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016068mg PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.2e-109
Identity = 220/316 (69.62%), Postives = 258/316 (81.65%), Query Frame = 1


Query: 1   MAAMIFHVFSSSALLSLGLYHIVSVTLNFLKSPQSYSARPYHPFPPSSSHQLHLPHHQHH 60
           MA +I+ +F+SS+LLSLGLYH +  T N+LKSPQSY A+PYHP P             HH
Sbjct: 1   MAGLIYEIFTSSSLLSLGLYHTICTTRNYLKSPQSYGAKPYHPLP------------LHH 60

Query: 61  HHYGLRYLQLYLSIPCLVIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILT 120
            H+ L++LQLYL I CL+I+F HQ + A+D DPL+KG TPVH F SLQSA V+FLFL L+
Sbjct: 61  SHHRLKHLQLYLIIVCLLISFVHQILTASDSDPLVKGRTPVHLFASLQSALVLFLFLFLS 120

Query: 121 LALLVSDSTSLLPLPSDLFFALASALFFLQFSVSSSAASVQTSDLQAKCDSVSGQISALA 180
           L+LL+S+STSLLP PSDLFFALA++LF+L +SVSSSAASVQTSDLQAKCD++SG+ISALA
Sbjct: 121 LSLLLSESTSLLPFPSDLFFALAASLFYLHYSVSSSAASVQTSDLQAKCDTLSGRISALA 180

Query: 181 SFLCLALACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVEG 240
           SFLC+ALAC  RLFVADV LG    LQGLW LQTGLSLYVEAFIPEGCH+LLDVV GVEG
Sbjct: 181 SFLCVALACNSRLFVADVALGGALCLQGLWELQTGLSLYVEAFIPEGCHKLLDVVKGVEG 240

Query: 241 STKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAAIG 300
           STKCDLEES+LRA+AILDL FL+HV FV +IV+V +A IAKTV +RR+GSYEALP  A  
Sbjct: 241 STKCDLEESKLRAMAILDLLFLVHVFFVFVIVMVTHAAIAKTVPIRRLGSYEALPNVAAS 300

Query: 301 GDNNHIQMKALTGTQA 317
             NNHIQMKAL GTQA
Sbjct: 301 DANNHIQMKALAGTQA 304

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BLAST of Lsi05G004290 vs. TrEMBL
Match: A0A067F828_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021990mg PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.2e-109
Identity = 220/316 (69.62%), Postives = 258/316 (81.65%), Query Frame = 1


Query: 1   MAAMIFHVFSSSALLSLGLYHIVSVTLNFLKSPQSYSARPYHPFPPSSSHQLHLPHHQHH 60
           MA +I+ +F+SS+LLSLGLYH +  T N+LKSPQSY A+PYHP P             HH
Sbjct: 1   MAGLIYEIFTSSSLLSLGLYHTICTTRNYLKSPQSYGAKPYHPLP------------LHH 60

Query: 61  HHYGLRYLQLYLSIPCLVIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILT 120
            H+ L++LQLYL I CL+I+F HQ + A+D DPL+KG TPVH F SLQSA V+FLFL L+
Sbjct: 61  SHHRLKHLQLYLIIVCLLISFVHQILTASDSDPLVKGRTPVHLFASLQSALVLFLFLFLS 120

Query: 121 LALLVSDSTSLLPLPSDLFFALASALFFLQFSVSSSAASVQTSDLQAKCDSVSGQISALA 180
           L+LL+S+STSLLP PSDLFFALA++LF+L +SVSSSAASVQTSDLQAKCD++SG+ISALA
Sbjct: 121 LSLLLSESTSLLPFPSDLFFALAASLFYLHYSVSSSAASVQTSDLQAKCDTLSGRISALA 180

Query: 181 SFLCLALACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVEG 240
           SFLC+ALAC  RLFVADV LG    LQGLW LQTGLSLYVEAFIPEGCH+LLDVV GVEG
Sbjct: 181 SFLCVALACNSRLFVADVALGGALCLQGLWELQTGLSLYVEAFIPEGCHKLLDVVKGVEG 240

Query: 241 STKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAAIG 300
           STKCDLEES+LRA+AILDL FL+HV FV +IV+V +A IAKTV +RR+GSYEALP  A  
Sbjct: 241 STKCDLEESKLRAMAILDLLFLVHVFFVFVIVMVTHAAIAKTVPIRRLGSYEALPNVAAS 300

Query: 301 GDNNHIQMKALTGTQA 317
             NNHIQMKAL GTQA
Sbjct: 301 DANNHIQMKALAGTQA 304

[Close]

BLAST of Lsi05G004290 vs. TrEMBL
Match: A0A061EDD4_THECC (Family of Uncharacterized protein function OS=Theobroma cacao GN=TCM_017387 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 2.1e-109
Identity = 217/316 (68.67%), Postives = 265/316 (83.86%), Query Frame = 1


Query: 1   MAAMIFHVFSSSALLSLGLYHIVSVTLNFLKSPQSYSARPYHPFPPSSSHQLHLPHHQHH 60
           MA +++ +F SS LL+LGLYH++  T NFLKSPQSYSA+P+HPF  SS+ +L        
Sbjct: 1   MAGLMYQLFESSTLLTLGLYHLICTTRNFLKSPQSYSAKPFHPFSFSSNLRL-------- 60

Query: 61  HHYGLRYLQLYLSIPCLVIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILT 120
                +YL LYL I CL IAF HQ+ +++DPDPLLKG TPVH F +L SAAV+FLF IL+
Sbjct: 61  -----KYLPLYLLIVCLFIAFLHQSFISSDPDPLLKGRTPVHRFTTLHSAAVLFLFFILS 120

Query: 121 LALLVSDSTSLLPLPSDLFFALASALFFLQFSVSSSAASVQTSDLQAKCDSVSGQISALA 180
           ++LL+S+STSLLPLPSDLFFA ASALFFLQ+SVS++AASVQTSDLQAKCDS+S ++S+LA
Sbjct: 121 VSLLLSESTSLLPLPSDLFFAFASALFFLQYSVSTAAASVQTSDLQAKCDSLSARVSSLA 180

Query: 181 SFLCLALACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVEG 240
           S +CL LAC P+LF+A+VGLGA   LQGLW LQTGLSLYVEAFIPEGCH+LLDVVSGVEG
Sbjct: 181 SLMCLILACHPKLFIAEVGLGAALCLQGLWELQTGLSLYVEAFIPEGCHKLLDVVSGVEG 240

Query: 241 STKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAAIG 300
           STKCDL+ESRLRAVAILDL F++H MFV++IV++ YA++AKTVG++R+GSYEALP  A  
Sbjct: 241 STKCDLDESRLRAVAILDLVFVVHAMFVVIIVMLTYALVAKTVGMKRLGSYEALPTNA-- 300

Query: 301 GDNNHIQMKALTGTQA 317
            D+NHIQMKALTGTQA
Sbjct: 301 ADSNHIQMKALTGTQA 301

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BLAST of Lsi05G004290 vs. TrEMBL
Match: M5VQC1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008977mg PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 3.6e-109
Identity = 229/318 (72.01%), Postives = 262/318 (82.39%), Query Frame = 1


Query: 1   MAAMIFHVFSSSALLSLGLYHIVSVTLNFLKSPQSYSARPYHPFPPSSSHQLHLPHHQHH 60
           MAA+++ + SSSAL+SLGLYH+V+ T N LKSPQSY+A+PYHPFP SSS      HH+  
Sbjct: 1   MAALLYQILSSSALVSLGLYHMVATTRNHLKSPQSYAAKPYHPFPLSSSSSSSSNHHR-- 60

Query: 61  HHYGLRYLQLYLSIPCLVIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILT 120
               LRYLQLY  I  L++A AHQ   + D DPLLKG TPVH F SLQSAA +FLFL+LT
Sbjct: 61  ----LRYLQLYAVIAFLMVAVAHQTFTSFDADPLLKGRTPVHRFTSLQSAASLFLFLLLT 120

Query: 121 LALLVSD-STSLLPLPSDLFFALASALFFLQFSVSSSAASVQTSDLQAKCDSVSGQISAL 180
           LALL+S+ + S+LPLPSDL F LA+ LF+LQ  VS  AASVQ SDLQAKCDSVSG+ISA+
Sbjct: 121 LALLLSEWAPSVLPLPSDLVFGLAATLFYLQCLVSWGAASVQMSDLQAKCDSVSGRISAV 180

Query: 181 ASFLCLALACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVE 240
           AS LC+ LAC PRLFVADVGLGA   LQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVE
Sbjct: 181 ASGLCVVLACQPRLFVADVGLGAAMCLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVE 240

Query: 241 GSTKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAAI 300
           GSTKCDL+ESR RAVAILDL FL+HVMFVLLIV+V YAV++K+VG+RR+GSYEALP AA 
Sbjct: 241 GSTKCDLDESRFRAVAILDLVFLVHVMFVLLIVMVTYAVVSKSVGIRRLGSYEALPNAAP 300

Query: 301 GGD-NNHIQMKALTGTQA 317
             D NNHIQMKAL+GTQA
Sbjct: 301 SSDHNNHIQMKALSGTQA 312

[Close]

BLAST of Lsi05G004290 vs. TAIR10
Match: AT5G13890.1 (AT5G13890.1 Family of unknown function (DUF716) )

HSP 1 Score: 342.4 bits (877), Expect = 2.9e-94
Identity = 186/316 (58.86%), Postives = 241/316 (76.27%), Query Frame = 1


Query: 1   MAAMIFHVFSSSALLSLGLYHIVSVTLNFLKSPQSYSARPYHPFPPSSSHQLHLPHHQHH 60
           M  M++ +F+S++LL+LGLYH++    + LKSPQSY+A+P++PFP  SS    +  + HH
Sbjct: 1   MGEMMYKLFASASLLTLGLYHLICTFFHLLKSPQSYAAKPFYPFPRLSS----VTGNNHH 60

Query: 61  HHYGLRYLQLYLSIPCLVIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILT 120
           +H  L+ L L++ I  L +AF H+ +++   DPL+KGSTPVH F SL SAAV FLFLI+ 
Sbjct: 61  NHNRLQNLPLFILILSLFVAFLHETLISFYSDPLVKGSTPVHRFSSLNSAAVFFLFLIIA 120

Query: 121 LALLVSDSTSLLPLPSDLFFALASALFFLQFSVSSSAASVQTSDLQAKCDSVSGQISALA 180
           +  L+SDSTSL+PLPSDL FALAS  FFL +S +SS+A++QTSDLQA CDS+S +ISAL 
Sbjct: 121 IYYLLSDSTSLIPLPSDLLFALASVGFFLHYSAASSSAAIQTSDLQAHCDSLSARISALC 180

Query: 181 SFLCLALACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVEG 240
           S LCL LAC  RLF+AD  L A   LQGLW LQTGLSLYV+ FIPEGCHRLLDV SGVEG
Sbjct: 181 SLLCLLLACRSRLFIADAALAAAICLQGLWQLQTGLSLYVDGFIPEGCHRLLDVQSGVEG 240

Query: 241 STKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAAIG 300
           ST+CD+++S+LRAV+ILDL F +HV+ V++++ V Y ++    GVRR GSYEALP     
Sbjct: 241 STQCDIQDSKLRAVSILDLMFTVHVVLVVILIFVTYTMVVMAAGVRRTGSYEALPTN--N 300

Query: 301 GDNNHIQMKALTGTQA 317
            D+NHIQMK+LTGTQA
Sbjct: 301 ADSNHIQMKSLTGTQA 310

[Close]

BLAST of Lsi05G004290 vs. TAIR10
Match: AT1G32120.1 (AT1G32120.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 52.8 bits (125), Expect = 4.6e-07
Identity = 66/281 (23.49%), Postives = 113/281 (40.21%), Query Frame = 1


Query: 7    HVFSSSALLSLGLYHIVSVTLNFLKSPQSYSARPYHPFPPSSSHQLHLPHHQHHHHYGLR 66
            H    +  L +G++HI S  + ++ +P S+  R +HP P  +                ++
Sbjct: 949  HALPGTLFLVVGVWHIWSSVVRYISNPSSFRVRVWHPVPGFNDR--------------IK 1008

Query: 67   YLQLYLSIPCLVIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILTLALLVS 126
            YL+LY+      I    + + +      + G     H    + + ++ +F IL    L+S
Sbjct: 1009 YLELYVVTIGSFIDLCIEFLYSTHLKFFVNGVLNPSHMNDFEHSGMLLMFFILGFIALLS 1068

Query: 127  DSTSLLPLPSDLFFALASALFFLQFSVSSSAASVQTSDLQAKCDSVSGQISALASFLCLA 186
            + T LLPLP +    +A+  F  +  +     S     L+     +   +  L     +A
Sbjct: 1069 EKTRLLPLPQEALCLIAATAFTAE-CLLFFFHSTSHKGLEGYYHLLLVFLIGLCVISSIA 1128

Query: 187  LACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVEGSTKCDL 246
             A  P  F  D+  G    LQGLW  QT  +LY    +P+GC       S  + S  C  
Sbjct: 1129 GAICPTSFPVDLCNGIAMTLQGLWFYQTAFTLY-GPMMPQGC-------SLKQNSVVCRS 1188

Query: 247  EESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRR 288
             +S +    + +      V+ VL+ V+  Y   A   GV R
Sbjct: 1189 VDSEVSGEFLANFQLFSLVLAVLVCVVGSYVFAASRFGVSR 1206

[Close]

BLAST of Lsi05G004290 vs. NCBI nr
Match: gi|659098103|ref|XP_008449979.1| (PREDICTED: uncharacterized protein LOC103491701 [Cucumis melo])

HSP 1 Score: 573.2 bits (1476), Expect = 2.9e-160
Identity = 309/316 (97.78%), Postives = 313/316 (99.05%), Query Frame = 1


Query: 1   MAAMIFHVFSSSALLSLGLYHIVSVTLNFLKSPQSYSARPYHPFPPSSSHQLHLPHHQHH 60
           MAAMIFHVFSSSALLSLGLYHIVSVTLNFLKSP SYSARPYHPFPPSSSHQLHLPHHQHH
Sbjct: 1   MAAMIFHVFSSSALLSLGLYHIVSVTLNFLKSPLSYSARPYHPFPPSSSHQLHLPHHQHH 60

Query: 61  HHYGLRYLQLYLSIPCLVIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILT 120
           HHYGLRYLQLYLSIPCLVIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILT
Sbjct: 61  HHYGLRYLQLYLSIPCLVIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILT 120

Query: 121 LALLVSDSTSLLPLPSDLFFALASALFFLQFSVSSSAASVQTSDLQAKCDSVSGQISALA 180
           LA+L+SDSTSLLPLPSDLFFALASALFFLQ+SVSSSAASVQTSDLQAKCDSVSG+ISALA
Sbjct: 121 LAILLSDSTSLLPLPSDLFFALASALFFLQYSVSSSAASVQTSDLQAKCDSVSGKISALA 180

Query: 181 SFLCLALACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVEG 240
           SFLCL LACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVEG
Sbjct: 181 SFLCLVLACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVEG 240

Query: 241 STKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAAIG 300
           STKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAAIG
Sbjct: 241 STKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAAIG 300

Query: 301 GDNNHIQMKALTGTQA 317
           GDNNHIQMKALTG QA
Sbjct: 301 GDNNHIQMKALTGNQA 316

[Close]

BLAST of Lsi05G004290 vs. NCBI nr
Match: gi|449455762|ref|XP_004145620.1| (PREDICTED: uncharacterized protein LOC101222896 [Cucumis sativus])

HSP 1 Score: 572.8 bits (1475), Expect = 3.8e-160
Identity = 308/316 (97.47%), Postives = 314/316 (99.37%), Query Frame = 1


Query: 1   MAAMIFHVFSSSALLSLGLYHIVSVTLNFLKSPQSYSARPYHPFPPSSSHQLHLPHHQHH 60
           MAAMI HVFSSSALLSLGLYHIVSVTLNFLKSPQSYS+RPYHPFPPSSSHQLH PHHQHH
Sbjct: 1   MAAMIIHVFSSSALLSLGLYHIVSVTLNFLKSPQSYSSRPYHPFPPSSSHQLHHPHHQHH 60

Query: 61  HHYGLRYLQLYLSIPCLVIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILT 120
           HHYGLRYLQLYLSIPCL+IAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILT
Sbjct: 61  HHYGLRYLQLYLSIPCLIIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILT 120

Query: 121 LALLVSDSTSLLPLPSDLFFALASALFFLQFSVSSSAASVQTSDLQAKCDSVSGQISALA 180
           LA+L+SDSTSLLPLPSDLFFALASALFFLQ+SVSSSAASVQTSDLQAKCDSVSG+ISALA
Sbjct: 121 LAILLSDSTSLLPLPSDLFFALASALFFLQYSVSSSAASVQTSDLQAKCDSVSGKISALA 180

Query: 181 SFLCLALACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVEG 240
           SFLCLALACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVEG
Sbjct: 181 SFLCLALACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVEG 240

Query: 241 STKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAAIG 300
           STKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAAIG
Sbjct: 241 STKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAAIG 300

Query: 301 GDNNHIQMKALTGTQA 317
           GDNNHIQMKALTGTQA
Sbjct: 301 GDNNHIQMKALTGTQA 316

[Close]

BLAST of Lsi05G004290 vs. NCBI nr
Match: gi|719982451|ref|XP_010250453.1| (PREDICTED: uncharacterized protein LOC104592700 [Nelumbo nucifera])

HSP 1 Score: 409.1 bits (1050), Expect = 7.2e-111
Identity = 223/316 (70.57%), Postives = 268/316 (84.81%), Query Frame = 1


Query: 1   MAAMIFHVFSSSALLSLGLYHIVSVTLNFLKSPQSYSARPYHPFPPSSSHQLHLPHHQHH 60
           MA +I H+ SSSALLSLGLYH++S T N LKSP +Y+A+PYHPF  SSS           
Sbjct: 1   MAVLISHILSSSALLSLGLYHLISTTRNHLKSPTTYTAKPYHPFSLSSSQPR-------- 60

Query: 61  HHYGLRYLQLYLSIPCLVIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILT 120
               ++YLQLYL I  L++AFAHQ IV++D DPLLKG TPVH F SLQSAAV+FLFL+L+
Sbjct: 61  ----IKYLQLYLIILSLLLAFAHQTIVSSDSDPLLKGRTPVHRFTSLQSAAVLFLFLLLS 120

Query: 121 LALLVSDSTSLLPLPSDLFFALASALFFLQFSVSSSAASVQTSDLQAKCDSVSGQISALA 180
           ++LL+S+ TSLLP PSDLFFA+ASA+FFLQ+SVSS++ASVQTSDLQAKCDS+S +ISAL+
Sbjct: 121 VSLLLSEITSLLPFPSDLFFAVASAVFFLQYSVSSASASVQTSDLQAKCDSLSARISALS 180

Query: 181 SFLCLALACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVEG 240
           + LCL LAC P+LFVADVGLGA+  LQGLWVLQTGLSLYVEAFIPEGCHRLLDVV+GVEG
Sbjct: 181 ALLCLILACQPKLFVADVGLGASICLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVNGVEG 240

Query: 241 STKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAAIG 300
           STKCDLEESRLRAVAILDL F++HVMFV++I++V+YA +AK+VG+R++GSYEALP A   
Sbjct: 241 STKCDLEESRLRAVAILDLVFVVHVMFVVVILLVVYAAVAKSVGMRKLGSYEALPTA--- 300

Query: 301 GDNNHIQMKALTGTQA 317
            D NH+QMKALTGTQA
Sbjct: 301 -DLNHVQMKALTGTQA 300

[Close]

BLAST of Lsi05G004290 vs. NCBI nr
Match: gi|658011887|ref|XP_008341203.1| (PREDICTED: uncharacterized protein LOC103404124 [Malus domestica])

HSP 1 Score: 408.7 bits (1049), Expect = 9.4e-111
Identity = 229/318 (72.01%), Postives = 266/318 (83.65%), Query Frame = 1


Query: 1   MAAMIFHVFSSSALLSLGLYHIVSVTLNFLKSPQSYSARPYHPFP-PSSSHQLHLPHHQH 60
           MAA+++ + SSSAL+SLGLYH+V+ T N LKSPQSY+A+PYHPFP  SSS  L+ P    
Sbjct: 1   MAALVYQIMSSSALVSLGLYHMVATTRNHLKSPQSYAAKPYHPFPLSSSSSNLNPP---- 60

Query: 61  HHHYGLRYLQLYLSIPCLVIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLIL 120
             H+ LRYLQLY  I CL++A  HQ + + D DPLLKGSTPVH F SLQSAA +FLFL+L
Sbjct: 61  -PHHRLRYLQLYAIIACLLVAVVHQTLTSFDADPLLKGSTPVHRFTSLQSAASLFLFLVL 120

Query: 121 TLALLVSD-STSLLPLPSDLFFALASALFFLQFSVSSSAASVQTSDLQAKCDSVSGQISA 180
           TLALL+S+ + S+LPLPSDL F LA+ALF+LQ  VS  AASVQTSDLQAKCDSVSG+I+A
Sbjct: 121 TLALLLSECAPSVLPLPSDLVFGLAAALFYLQSLVSWGAASVQTSDLQAKCDSVSGRITA 180

Query: 181 LASFLCLALACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGV 240
           +AS LC  LAC PR+FVADVGLGA   LQGLWVLQTGLSLYVEAFIPEGCHRLLDVV+ V
Sbjct: 181 VASGLCAVLACQPRVFVADVGLGAAMCLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVNAV 240

Query: 241 EGSTKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAA 300
           EGSTKCDL+ESR RAVAILDL FL+HVMFVLLIV+V YAV+AK+VG+RR+GSYEALP AA
Sbjct: 241 EGSTKCDLDESRFRAVAILDLVFLVHVMFVLLIVMVTYAVVAKSVGIRRLGSYEALPNAA 300

Query: 301 IGGDNNHIQMKALTGTQA 317
              D+NHIQMKAL+GTQA
Sbjct: 301 PSSDHNHIQMKALSGTQA 313

[Close]

BLAST of Lsi05G004290 vs. NCBI nr
Match: gi|568829243|ref|XP_006468936.1| (PREDICTED: uncharacterized protein LOC102610526 [Citrus sinensis])

HSP 1 Score: 406.4 bits (1043), Expect = 4.7e-110
Identity = 222/316 (70.25%), Postives = 259/316 (81.96%), Query Frame = 1


Query: 1   MAAMIFHVFSSSALLSLGLYHIVSVTLNFLKSPQSYSARPYHPFPPSSSHQLHLPHHQHH 60
           MA +I+ +F+SS+LLSLGLYH +  T N+LKSPQSYSA+PYHP P             HH
Sbjct: 1   MAGLIYEIFTSSSLLSLGLYHTICTTRNYLKSPQSYSAKPYHPLP------------LHH 60

Query: 61  HHYGLRYLQLYLSIPCLVIAFAHQAIVAADPDPLLKGSTPVHHFISLQSAAVIFLFLILT 120
            H+ L++LQLYL I CL+I+F HQ + A+D DPL+KG TPVH F SLQSA V+FLFL L+
Sbjct: 61  SHHRLKHLQLYLIIVCLLISFVHQILTASDSDPLVKGRTPVHLFASLQSALVLFLFLFLS 120

Query: 121 LALLVSDSTSLLPLPSDLFFALASALFFLQFSVSSSAASVQTSDLQAKCDSVSGQISALA 180
           L+LL+S+STSLLP PSDLFFALA++LF+L +SVSSSAASVQTSDLQAKCD +SG+ISALA
Sbjct: 121 LSLLLSESTSLLPFPSDLFFALAASLFYLHYSVSSSAASVQTSDLQAKCDILSGRISALA 180

Query: 181 SFLCLALACLPRLFVADVGLGATFFLQGLWVLQTGLSLYVEAFIPEGCHRLLDVVSGVEG 240
           SFLC+ALAC  RLFVADV LG    LQGLW LQTGLSLYVEAFIPEGCH+LLDVV GVEG
Sbjct: 181 SFLCVALACNSRLFVADVALGGALCLQGLWELQTGLSLYVEAFIPEGCHKLLDVVKGVEG 240

Query: 241 STKCDLEESRLRAVAILDLAFLIHVMFVLLIVIVIYAVIAKTVGVRRVGSYEALPAAAIG 300
           STKCDLEES+LRA+AILDL FL+HV FV +IV+V +A IAKTV +RR+GSYEALP AA  
Sbjct: 241 STKCDLEESKLRAMAILDLLFLVHVFFVFVIVMVTHAAIAKTVPIRRLGSYEALPNAAAS 300

Query: 301 GDNNHIQMKALTGTQA 317
             NNHIQMKAL GTQA
Sbjct: 301 DANNHIQMKALAGTQA 304

The following BLAST results are available for this feature:

BLAST of Lsi05G004290 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G004290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCA4_CUCSA	2.6e-160	97.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G251910 PE=4 SV=1	[more]
V4W2G1_9ROSI	1.2e-109	69.62	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016068mg PE=4 SV=1	[more]
A0A067F828_CITSI	1.2e-109	69.62	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021990mg PE=4 SV=1	[more]
A0A061EDD4_THECC	2.1e-109	68.67	Family of Uncharacterized protein function OS=Theobroma cacao GN=TCM_017387 PE=4...	[more]
M5VQC1_PRUPE	3.6e-109	72.01	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008977mg PE=4 SV=1	[more]

BLAST of Lsi05G004290 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13890.1	2.9e-94	58.86	Family of unknown function (DUF716)	[more]
AT1G32120.1	4.6e-07	23.49	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of Lsi05G004290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659098103\|ref\|XP_008449979.1\|	2.9e-160	97.78	PREDICTED: uncharacterized protein LOC103491701 [Cucumis melo]	[more]
gi\|449455762\|ref\|XP_004145620.1\|	3.8e-160	97.47	PREDICTED: uncharacterized protein LOC101222896 [Cucumis sativus]	[more]
gi\|719982451\|ref\|XP_010250453.1\|	7.2e-111	70.57	PREDICTED: uncharacterized protein LOC104592700 [Nelumbo nucifera]	[more]
gi\|658011887\|ref\|XP_008341203.1\|	9.4e-111	72.01	PREDICTED: uncharacterized protein LOC103404124 [Malus domestica]	[more]
gi\|568829243\|ref\|XP_006468936.1\|	4.7e-110	70.25	PREDICTED: uncharacterized protein LOC102610526 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006904	DUF716_TMEM45

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0061025	membrane fusion
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005484	SNAP receptor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G004290.1	Lsi05G004290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006904	Protein of unknown function DUF716 (TMEM45)	PANTHER	PTHR16007	EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED	coord: 1..311 score: 1.7E
IPR006904	Protein of unknown function DUF716 (TMEM45)	PFAM	PF04819	DUF716	coord: 137..277 score: 1.5
None	No IPR available	PANTHER	PTHR16007:SF13	SUBFAMILY NOT NAMED	coord: 1..311 score: 1.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G004290	Csa3G251910	Cucumber (Chinese Long) v2	culsiB212
Lsi05G004290	CSPI03G19980	Wild cucumber (PI 183967)	cpilsiB210
Lsi05G004290	Cucsa.032030	Cucumber (Gy14) v1	cgylsiB004
Lsi05G004290	CmaCh11G015620	Cucurbita maxima (Rimu)	cmalsiB126
Lsi05G004290	CmaCh14G007780	Cucurbita maxima (Rimu)	cmalsiB249
Lsi05G004290	CmoCh14G007910	Cucurbita moschata (Rifu)	cmolsiB237
Lsi05G004290	CmoCh11G015600	Cucurbita moschata (Rifu)	cmolsiB115
Lsi05G004290	Cla007156	Watermelon (97103) v1	lsiwmB363
Lsi05G004290	MELO3C014761	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G004290	ClCG05G012490	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G004290	MELO3C014761.2	Melon (DHL92) v3.6.1	lsimedB401
Lsi05G004290	Cla97C05G094250	Watermelon (97103) v2	lsiwmbB329
Lsi05G004290	Bhi01G001397	Wax gourd	lsiwgoB437
Lsi05G004290	Cp4.1LG04g06450	Cucurbita pepo (Zucchini)	cpelsiB553
Lsi05G004290	Cp4.1LG03g06440	Cucurbita pepo (Zucchini)	cpelsiB511
Lsi05G004290	CsGy3G019810	Cucumber (Gy14) v2	cgyblsiB199
Lsi05G004290	Carg22306	Silver-seed gourd	carlsiB435
Lsi05G004290	Carg25308	Silver-seed gourd	carlsiB443
Lsi05G004290	CsaV3_3G020030	Cucumber (Chinese Long) v3	cuclsiB231

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G004290	Wax gourd	lsiwgoB447