Lsi05G003590 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G003590
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Senescence-associated family protein
Location	chr05 : 4550087 .. 4559082 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAATTCCCATCCCCTCGCGTCCATTCTTATCCGATCATAACCGGGGGGGGGGGGAAATGACAATGAGGATCGAATGTGAACTTCCCGTAGGCCCTCATTTCATCCATTCATTTTCATTCCCATTTCTTGTCTGATTGTGTTGGCTGTCACGGCGCCATAGATTTTGTTTGTGGTTCCAATTTCTTCCCCCGCATTTGCTTCCCCTTTCTCCCTCACTACAAATTTTGCTCCTTTTCATTTCCCCTTTCTCTTGTCTCTGCTCTGTTTTGCTCCTTCACACAGGTTAGTTTGGCACTGTGCTCCTTCAGAAGCTCTCAGCTCCACTTTTCCTTCATGGGTTTTTCTCTCATCGTCTTTTAAGCTTTGAACTCTTCTGTTTTCACTCATCACTCTACTTTGATCTTTATATTTGTTGATCTTTATATCTGTGTGGTGCTTGTGGCTTGATTTTGATTATTTTCTCATTTGAATTGAGCTTGGTATGCAAAACAGTGATTATTTGGATTATTAAACTTTGATCCTGTCATTTCAACTTAATTTCTATCCATTTATGGTTTGTTACTTGAAAGAACAAATTTCCCAAGTGGGGAGCTAGCATTCTGAATTGCAGATTTCTTTGATTTGGTGATAAACTTTCCTCCAACAGTTGGATTTAGTTCATAAGGAGCTACTATTTGATTTATTAATGGTTTAGATCACATTCTTGGCAGACATATGAAGAATTCCTTTGGGAGAGCCGAGGAGAAAATTCTTGGAACTGCCTCAGCAAGGCAAGTGTTGCTTTTCCAAATATGAAACCCGAAGAGACTATCACAAAGTTAGGTCTTGTGTTAAGTTTGAATAGTTGAGAAACTATTGAAATGGAAACATATTTCCACTGAAGTTGTGGGAAGTCACTACTGAGAAAACAAATAGCCTCCCTTTAGGAGAGTATTAGACATTACTAAAATCCTAGAAACAAATGATGCCCAATCCATTAAGAATTATCATTGAAACAACATAATTTAAAGAGCTTGTTGGTCGTGAAGTCTAATACAAGAACAAAAGATCCTTCACATAGAACACTTGCCTTTGCCAACCAACCAGCACCTTCTGACCTGCCATGGAAACACCTTCGTTCTTCTGCTTTTGCAAAGCCAAAAATGAGACACAAATATAATCTTAACCAAAGTGCTTCTCCTGATTGTCACATTTACATGGGCTCTTTCATTGGTGATCAAGATTTGTCTAATTGAGCATGAAAACTCTTCTGTTGGAAAATCTCTTCCTCAAATTTGCTTTCATGCCTTACACTTTTATGGATTATCAACTCTCGCTATAAAACCTGCTCCTTCTTGTGGTGTTCCTCAATTCTCATGGCTTCTTTACACTCCTCCGAATTGTCCATACAAATGCAAGCTATCTAGCTCCTGATTCCTATCTACTCTGGTATGAATGGGTGGTTCTATTGGCGATGAGAAGATTTACTATATTGAAGTTTTTCAAAGATGAAGCATTGGTAAAAAAAAGTATTTTGGTTATCTAGTCGCACGGAGTTTGAGAATCTTGACTTTCCACATTACTTGGAAACTGAGCTACTCCCCCAATCCTTTCATGCATTTTATTTCCTGTCACGGGGAAAAGTTAAGTAATGTCTTAATAACCAGTTTTCTAATATCATTCCAATAATTTTCCCCTTCTTTCCCTACGTTTTCGCCATCCCCTTATTGATCGAGAGGCAGTTGAGGTTGTGAGTCTATGATTCACTAACACATGTTTTGCGTCAAAGAAGAACTAATAAGAAGGAAATAGAAAGACTACCTCTTTTTGCAACAAATTACAAGTATTTAACTTTCCTTTTTTAACAGAAGACCCAAGAGAAACCTGATTTTATAGCTTTGAGATTCATTAATCCTAATTGCAGTTTAGTGGTTGATTAGAACAAACTTCACAACAGTAGAAACATTATTCACTTTAAGAGTATATCAGATGCTTTTATTGTAATGTACAGACCATTGCTGATGGAATACTAGAATTATTCTTTCAGAATGGAATATGACACAAACTCAGTACGTCAATTGTGAATTTATGATTGTCTATTTTGTGGTTTATTGTGAATAACAATATTGATGATCAACAGTATGAAAATGGTTGAATTCTTGCTCTTGTGATTGTCATCTGATCAAATGCATCAAAACTGCCATCAATGCCAATGATTCATGTATAATCAGGCATTCATTATGAAGGATGTATATCTGATTTTATTGTTCTTGCTTAATCTAATGTACATGGTAGTTTTATTTGCTTAGTTTATGTAGAGATCAATATAGAACCTATGAAGTATCTTTTTTTCCAATTTGGTTGTGAGTTATCCTAAGAGCACGTTCCTTGCTAGGTTCATCCCTTTTACTCATTGATCCCCATGGCATTAACTGCAATCAAGGTTTCAAGCAGCCCAGTTGTGACCAGTAAGGCAACTGTATCTAATTCTTATGGAGTTTTTTCTTCTTTATCCAAGTCAGAACGTGAAAAATTAAATCCATCAAGCTGTAGAGTTGACATTGGGGAGCCCCATGGATGTCTCTTGACAGCAAAAGTCAAAGTCTCTAGTCATGGGTGGCGGAACTCTTATGGTAAACCTTGGAGCTTTACCCTGTCACGCAGACCTGCCGTGTTATGTTTTTCAACTGGGACTCATCATACAGAAACTGAAGAATTTGCTAGGCCTTATGATAGTTCTGCAGGTTTAAGATGGTAAGATGATGCCAAATCATTAGTGAATTTTCTGGCATGTTTGATGCTAGAAGTTTACTGAACTACAATTGTCTCTACGCTATACTATGCCTTATATAATTGGTTGAGATGATTGTATAAAATTTATTTCCCTATGTAAAAGAAAAGCATTCAGTTGTTTTAAAGAATGCTATACTAAATTATATATAAGAACTCAAGAGTAGTCACCTTCTTAAATGCAATGTTATGTTGTTGGGCTTTCCCATGGACAAACTACAGATATTCTATTTGAGTTACTTTTCTATAATGAATTTACCGAGGAAAATATCCAAGTTCACTTATAAGCACGAATACCTGTGCAAGAATATCAAGGACAACAAAAGGAATATGGGCTTTTTCCCCATCCTATTCTTAGGGAAGACTGTTTTCTTCTGTTTTATTGAGGAAAACTATATCATTGTAGTTTTATTTTAGAACTCAAGGACACAGTTGTACAACCTATAGAACAAATCATGTTCAAGTAAGGTCATATCATTGTAGTTTTATTTAAAATAAGTCTTTTGCTTTCCCTATTCTTACCAATTATATGTATAAATGCTTCATTTCTATAATCTAAAATATGTAATTATTTAGTTTTAGAGTTGGTATTACAAATTCAATCAATTTGTTGCTGACCTTTTTGCAATCATTTTGAAGTCTTGTATGATTTTGAATTTTGTTAATCATCGGTGCAATCACATAACCAGTCATAGTTGTCGATGAACACAAACTATTGTTCTTGGTAATATTTTGAGCTTACATAATAAGATTATTTATATCCCTCATCAGTGCCCAATCTGGAGATGATGAAGATGATCAGCCAACTGTTTGTAGAAGAACTATTAAGTCCAACCCTGGAATAGTTGAAGCCTGTCGATTTGCATACAATGATGCAAAATTTGTAAATGAAAGGGCTCGCAATGACATCGTATTGCTTTCTCGGTAATATCCATGATTTAGAATCATTTTATTTCGTGGCCGTAATGATATTTGTCTAACTACTTTCATGAAGATTATCGGTATCAATAGTTAGTTGCCAGTCTTACTTGTCCTTTAGATGCATATGATCGATTTAAATGTAACAATTGAGACATTTGGTTTGATATAATGGAAAAGAAATATATCATGGTTATCATGGTTAAATGAAGTTGTTGAATTTTGTGAACATGGTCATGAAAATTTGTTTTGTTGTGTCATTATTAGGTTCTATCCAGTTTTCTTGGTTAGCTGTTCGCACACTCTTATGCTGTATGACTTGAAAGTGGATGTGTTGATTATGATGCATGTAAATGTAGGATTTTTCATCCACTGTGTTCTTATTCACATATTTTCCTACTATTTTCAGCGGCATAATGAGACTGGATGCACGTGCACGTCAAGATGTTGCTATCCTTGGATCTGAGTTTCTTAAGCTTGATGGTATCCCTTTATTTTAGATGCAATATTTCCCTTCATCACCTGCATATCTTGTTATTGATACTCGAAGAACCTGGAGGATTATAAATTATTTTCATGCATGTCCTAAATTATTGTATCTGTTTCTCTTATTACTACTACTCATCTTAACTAGTTTTTCGCCCCCAAGAACTTTGGGTTTGGCTTGCCTGCTACTTCATTTCAGTCTATGTTTGCCCTCAACATGGATGCTTCCATCTGATCTATCCAAATTGGGAAGTGGTTTTATTTAGATCCCCTCTTCTTTATGATTTTTTTGATATATTTTTCCATTCTCATGCCATCCACTAGTAACATTCTTGTGAAATATGAGCTTCCTTTTTTCTGTTTGTTTCCTGCATCTTATTCTCATATTAGCATGTTGTTTTCATCACTAGTAATTTTATAGCATTATTTGTAACTGAGCCTAACTCCTATTTTACTCTGTACACTTCTATCGGATGTTATTCCTGTTGCTGGGATATTGTCATTCTTCGTGCTGCTAAAATATGAAGTTTCCATTAAGTTGAGATCATCTGCCTAATGGTTTCATTTTCTTGACATTTTAATGGTTAGCTCGAGCTAGAGAGGATACAGAGACAATTGACCGTAATGTGAAGAAAAAAGCTGAGCGACTGCGACGTATTGCTACAGTATGTACAAATTGACATTTTTTAATCTTATATGGATACAGTATTGAATCTTGAATTCTATTCTCTTTCAGACTTTGAGAGAAAAGGCTCAGTCTAGTCTGAAAAGTGCTGCAGATGAGCATTGGAGTGATGGAGCCTTAGAGGTACCTTATTGTATTCCAATATTCGTGACTTTAGTTACTCTTGATGCATGAATTTATGATGAAAATCTGTTCCAAGTTGGGAGTTTTTAAAAAAGGCCAACTCCAAAAGAATCAGTCTGGAGAGATTTCTTGATGCATGAATTTATGATGAAAATCTATTCCAAGTTGGGAGTTTGATAATCTGGAAAACTAGAGGGCTGGGGAATAATTCGGAAAGAATCAGTCTGAAGAAATTTCTGTATCACATTTGTCTTGACATGGTTCTTATTCAAGAATCAAAGGTTGCAATTAATGGCCCTTTTTTGTCATCAATTTCAACGCAGATTATTTTTTAAGATTTGAAGGGGCATTAATGAATGTCTCTCAATTGTTGTACATTGGTTTTGAAGAAATTGGTTTTAGAAGAAGGGGTTAAGATTTCCCTTGGTGTTGTCTTTTTTGCCATTGGAGTTGAGGTTTTAATTTCTGTCTTCCTTGAAGAGTTCTTGGTGGGTTGAATCTATTAATGGAAATTCCTTGGAAAGGTTTCTCATTTATTAGTTTCCATGCATGAAGACTTGTTGGTTTCGAAGCATTTAATTTATTGCTGGTGGGGTTCTTGAGAGTTGAAGCAATTAATTCTAATTTGTTGGAATAGGCCTTGGTGGTTAAGAGTCCTTTATTGGTGAGCCTTTGCATTGGCTTCATCTTAATGAATTGTTTTTTTCTTTTGTTAGAGAAGAAAAATCAATGAAATATCCAAAGATATTCGAAAGGAGCCCATGTAACAGGTATACAAATGATTTCTCCAATTTGCAACAAGGAAATTTGAACTGTGTACTTGTATGGGCTGTAAATTTTTTACACCAAAAAAGAGCATAGAAAACAGCTGAATCAAGAATATCTCCAGAGGATCTTTCCTTGTCTTGAAAAATTATGTTATTTCTCATCCCAAATCTTCCACAATACAGCTCTTATCATACTTGACCATAATTGAGCCTTTGTAGTTTTGGAAGGGTGATCCGTGAGCAACATGTTGATCCAATCAAGAGAGGCCAAGGGGGGACAGCGTACCAACCATAAGCAGAAAATAGGGCAGTCCAATTATTGGCAACAAAAGGACACTGGAAAAAAAATACAATCTTGTGATTCCGCACTGTTCTTGCAAAGGCAACGCCATGATGGAGAAATGTAGAGCGAAGGACATCTTTTCTGAAGCTTGCCCATCGTGCTAAGGCAAGAGTGTGAAATTTCCCAAAGAAGGAATTTAATTCTTTTAGGACGAGGAATTTAATCCTTTCAGGACAAGGGAACTTCCATCTTAATGAATCATTTAAATCTGACCTTTTGAATTTCTCAAACATCCAACCACCTTTTGACGACTCTTCTATGAAGAATTAAGTGTTATTGAAGATTCACTTGATCTCTTTTCTTCGGCCACTTCTTTTTTGACATCTTCCAAGTTCCAAGAAGGTTTTCTATGTTCTATCTAAGGAGCAAGTTGGCATCTTCATCATCCTCATTGCTATGGCTAGTTTAGAAGATTCCGCATTGATGGTGATTTTTTATTCCTCAATAAGCACCAAGTCAGTTTGTTTTGGCCTCGGTTTCAAGCTTCATTTTCATTCAAAGCTCCTATCTTTTGAGTTGCAAGTTTGGCCCTTTGTTGGAAGTCTTCATCCTTCTTTCCCATTGATCACCATGACTGTCCTATTGCTGCGGAGATTTTTATATCATCCCCTCTTAGTTTTTCCTTTGCAGTTCCTTTCACAACATTTATGAAGTTTGTCTGCTGGAGGGATCTTTTTGTCTCTTGGAGTTTGAAGCGGTGTTCCACCCTCAAATAACTTTTGAAGTCTTGTTCTCTCTTGGCTACTTTGCATTGCCCTTATTGCTCTCATTTTTTCCTAAGGGTGTTCTTTATTTTAGTTTTTATTTGTTTTTACAAGGCATACTTCCTTTGTATTTTTTCTATTTCGCATTCTTTGTTTCTTATTTTAAGTCGGTTGGGGTTTACCCTCGGGTGGAATTATTTGGTGGGTTTGAACAGTACTACCGTCTGGAGGAGTACAGCAGATCCTCTTATGATTGGCCAGACTACTAGATTAAATATTGCACAGATGTGGCTTTGCGTGTCTATAGTGTAGGCTTGCAGATGCAAGCAGATCCTTTTTCCTTTATTCCTTTTTGGTTCTTATGTTTCTTTAACTGGTTGAATTAGTGAAGTTTCATGCAATAGCTCTCACTGCTGTCTTCCTAATTTTCAGGCTGATTTGCGCTTGGCTGATTTCCGTGCTAAACAGCGGGCAATGGAAGATGCCATGACAGCTTTGGAGGTAAATCATATGTACTACAGTATTTGTTTCTTTTGGGGGGGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGAAGAATTTTGATTAGTTTGAGTCATTTGATGTGGTTTTGTATGTTTTGCCGAGTTTTAACTCCAAGAAAGATCAAAGATGTGACTTTTTTTGTACTATTTTGTTGCAGTTTGTAAAAAATATTCATGATATGATGGTGAGAAGGATGTACAAATTGTGAGTTATATTCTTTTTATTGGAAATCCGTCTCCTCATTTGCCCCTTCGTATCTCTCCATTTCCCAATAGGAACATATTTGATATATAACCAAATTTTTGACATTCATATGCAGTCCTCTGTCAAACGAATCTGCTTTTCCAATTGCCAATGACATGATGGGCCGTATAAAACTAGAAAAAAATGGCAAGAGTCTAGATTTCTTAACTGGCGAACTATCAACCGATCGCATTTCTGCTATTCAGGTATCTTTATCTGTAGTCATCGATACTTATGTTTCATTCTGCAGTTCGTGTCCTTAATCACAATACCATCTGCTGAATGTACAGGAAATTTATTGGAGTATGGCCTCTGCCCTCTCTGAAGCTGATGGGATTGATTATACTGATCCAGAAGAGGTCTGAATTACCATATCAATTTTTTGTACAATGCTGATAATGGTTCCTTTTGCTCATACATTGTTTCTATCTTGCGTAGCTCGAGCTGTTGATTAGAACTCTTATGGATCTTGATGCAATGGATGGCAAAAGCAGTGTATCACTGCTCGCAGAATGTTCGAGTTCTCCTGACGAAAATACTAGGTATGCTGATTTTGGTTCCTGATGAACATAGTCACATAGGTTTCTTAGAACTTGAGAGTATGTTTGGAGATACTGGAACTCTAAGTTCAGCCTCCAGATTCAGAGCTGAACTTAAAACCTCTGTTGCCTCTCAAAGCTAAGAAAAACTCAGGACTGAATTCATAAGTTTGTTATTGTTGCTGATATGCTCTTTTTCGTATCATTGCTTCAATGGAGTTATAATTTACTTTGTGATTTTGGTAATCAAGACAAGCACTGGCCAATGCTCTGGCAGCAGCCCCATCCATGTGGACTCTTGGAAATGCAGGCATGGGAGCATTGCAGGTAGGTGCTTTCTCTCAGTGTCTCGCTCTCGCTCACGGGGTTCCGGTTGGAGTTTGATGCTTGTTTGTTGGTTTTGCAGAGACTGGCAGAAGATAGTAACCCAGCAATTGCTGCTGCAGCATCCAATGCCATCAAGGAGCTGAAGAAACAGTGGGAAATAGGAGAAGAAGATAGCTGGAGCTTTACACTGAATCAAAAGGCTACCATGGAAGGCAATGAAGCTGATGATGATGAAGATAATGCAGATCCATTATGAGAGATCTTAAGTAAAATCTTTACTGTAGATAAGCTAAATTTAAGCGCTTGTTAGAAGCGTAGGCTTACCAAAAA

mRNA sequence

AAATAATTCCCATCCCCTCGCGTCCATTCTTATCCGATCATAACCGGGGGGGGGGGGAAATGACAATGAGGATCGAATGTGAACTTCCCGTAGGCCCTCATTTCATCCATTCATTTTCATTCCCATTTCTTGTCTGATTGTGTTGGCTGTCACGGCGCCATAGATTTTGTTTGTGGTTCCAATTTCTTCCCCCGCATTTGCTTCCCCTTTCTCCCTCACTACAAATTTTGCTCCTTTTCATTTCCCCTTTCTCTTGTCTCTGCTCTGTTTTGCTCCTTCACACAGGTTCATCCCTTTTACTCATTGATCCCCATGGCATTAACTGCAATCAAGGTTTCAAGCAGCCCAGTTGTGACCAGTAAGGCAACTGTATCTAATTCTTATGGAGTTTTTTCTTCTTTATCCAAGTCAGAACGTGAAAAATTAAATCCATCAAGCTGTAGAGTTGACATTGGGGAGCCCCATGGATGTCTCTTGACAGCAAAAGTCAAAGTCTCTAGTCATGGGTGGCGGAACTCTTATGGTAAACCTTGGAGCTTTACCCTGTCACGCAGACCTGCCGTGTTATGTTTTTCAACTGGGACTCATCATACAGAAACTGAAGAATTTGCTAGGCCTTATGATAGTTCTGCAGGTTTAAGATGTGCCCAATCTGGAGATGATGAAGATGATCAGCCAACTGTTTGTAGAAGAACTATTAAGTCCAACCCTGGAATAGTTGAAGCCTGTCGATTTGCATACAATGATGCAAAATTTGTAAATGAAAGGGCTCGCAATGACATCGTATTGCTTTCTCGGTTCTATCCAGTTTTCTTGGTTAGCTGTTCGCACACTCTTATGCTCGGCATAATGAGACTGGATGCACGTGCACGTCAAGATGTTGCTATCCTTGGATCTGAGTTTCTTAAGCTTGATGCTCGAGCTAGAGAGGATACAGAGACAATTGACCGTAATGTGAAGAAAAAAGCTGAGCGACTGCGACGTATTGCTACAACTTTGAGAGAAAAGGCTCAGTCTAGTCTGAAAAGTGCTGCAGATGAGCATTGGAGTGATGGAGCCTTAGAGGCTGATTTGCGCTTGGCTGATTTCCGTGCTAAACAGCGGGCAATGGAAGATGCCATGACAGCTTTGGAGTTTGTAAAAAATATTCATGATATGATGGTGAGAAGGATGTACAAATTTCCTCTGTCAAACGAATCTGCTTTTCCAATTGCCAATGACATGATGGGCCGTATAAAACTAGAAAAAAATGGCAAGAGTCTAGATTTCTTAACTGGCGAACTATCAACCGATCGCATTTCTGCTATTCAGGAAATTTATTGGAGTATGGCCTCTGCCCTCTCTGAAGCTGATGGGATTGATTATACTGATCCAGAAGAGCTCGAGCTGTTGATTAGAACTCTTATGGATCTTGATGCAATGGATGGCAAAAGCAGTGTATCACTGCTCGCAGAATGTTCGAGTTCTCCTGACGAAAATACTAGACAAGCACTGGCCAATGCTCTGGCAGCAGCCCCATCCATGTGGACTCTTGGAAATGCAGGCATGGGAGCATTGCAGAGACTGGCAGAAGATAGTAACCCAGCAATTGCTGCTGCAGCATCCAATGCCATCAAGGAGCTGAAGAAACAGTGGGAAATAGGAGAAGAAGATAGCTGGAGCTTTACACTGAATCAAAAGGCTACCATGGAAGGCAATGAAGCTGATGATGATGAAGATAATGCAGATCCATTATGAGAGATCTTAAGTAAAATCTTTACTGTAGATAAGCTAAATTTAAGCGCTTGTTAGAAGCGTAGGCTTACCAAAAA

Coding sequence (CDS)

ATGGCATTAACTGCAATCAAGGTTTCAAGCAGCCCAGTTGTGACCAGTAAGGCAACTGTATCTAATTCTTATGGAGTTTTTTCTTCTTTATCCAAGTCAGAACGTGAAAAATTAAATCCATCAAGCTGTAGAGTTGACATTGGGGAGCCCCATGGATGTCTCTTGACAGCAAAAGTCAAAGTCTCTAGTCATGGGTGGCGGAACTCTTATGGTAAACCTTGGAGCTTTACCCTGTCACGCAGACCTGCCGTGTTATGTTTTTCAACTGGGACTCATCATACAGAAACTGAAGAATTTGCTAGGCCTTATGATAGTTCTGCAGGTTTAAGATGTGCCCAATCTGGAGATGATGAAGATGATCAGCCAACTGTTTGTAGAAGAACTATTAAGTCCAACCCTGGAATAGTTGAAGCCTGTCGATTTGCATACAATGATGCAAAATTTGTAAATGAAAGGGCTCGCAATGACATCGTATTGCTTTCTCGGTTCTATCCAGTTTTCTTGGTTAGCTGTTCGCACACTCTTATGCTCGGCATAATGAGACTGGATGCACGTGCACGTCAAGATGTTGCTATCCTTGGATCTGAGTTTCTTAAGCTTGATGCTCGAGCTAGAGAGGATACAGAGACAATTGACCGTAATGTGAAGAAAAAAGCTGAGCGACTGCGACGTATTGCTACAACTTTGAGAGAAAAGGCTCAGTCTAGTCTGAAAAGTGCTGCAGATGAGCATTGGAGTGATGGAGCCTTAGAGGCTGATTTGCGCTTGGCTGATTTCCGTGCTAAACAGCGGGCAATGGAAGATGCCATGACAGCTTTGGAGTTTGTAAAAAATATTCATGATATGATGGTGAGAAGGATGTACAAATTTCCTCTGTCAAACGAATCTGCTTTTCCAATTGCCAATGACATGATGGGCCGTATAAAACTAGAAAAAAATGGCAAGAGTCTAGATTTCTTAACTGGCGAACTATCAACCGATCGCATTTCTGCTATTCAGGAAATTTATTGGAGTATGGCCTCTGCCCTCTCTGAAGCTGATGGGATTGATTATACTGATCCAGAAGAGCTCGAGCTGTTGATTAGAACTCTTATGGATCTTGATGCAATGGATGGCAAAAGCAGTGTATCACTGCTCGCAGAATGTTCGAGTTCTCCTGACGAAAATACTAGACAAGCACTGGCCAATGCTCTGGCAGCAGCCCCATCCATGTGGACTCTTGGAAATGCAGGCATGGGAGCATTGCAGAGACTGGCAGAAGATAGTAACCCAGCAATTGCTGCTGCAGCATCCAATGCCATCAAGGAGCTGAAGAAACAGTGGGAAATAGGAGAAGAAGATAGCTGGAGCTTTACACTGAATCAAAAGGCTACCATGGAAGGCAATGAAGCTGATGATGATGAAGATAATGCAGATCCATTATGA

Protein sequence

MALTAIKVSSSPVVTSKATVSNSYGVFSSLSKSEREKLNPSSCRVDIGEPHGCLLTAKVKVSSHGWRNSYGKPWSFTLSRRPAVLCFSTGTHHTETEEFARPYDSSAGLRCAQSGDDEDDQPTVCRRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSRFYPVFLVSCSHTLMLGIMRLDARARQDVAILGSEFLKLDARAREDTETIDRNVKKKAERLRRIATTLREKAQSSLKSAADEHWSDGALEADLRLADFRAKQRAMEDAMTALEFVKNIHDMMVRRMYKFPLSNESAFPIANDMMGRIKLEKNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTDPEELELLIRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMGALQRLAEDSNPAIAAAASNAIKELKKQWEIGEEDSWSFTLNQKATMEGNEADDDEDNADPL

Homology

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BLAST of Lsi05G003590 vs. TrEMBL
Match: A0A0A0LAR4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G284030 PE=4 SV=1)

HSP 1 Score: 719.9 bits (1857), Expect = 2.0e-204
Identity = 376/420 (89.52%), Postives = 390/420 (92.86%), Query Frame = 1


Query: 54  LLTAKVKVSSHGWRNSYGKPWSFTLSRRPAVLCFSTGTHHTETEEFARPYDSSAGLRCAQ 113
           ++T KVKVSSH  RNSYGKPWSFTLSRRPAVLCFSTGT H ETEE  RPYDSSAGLRCAQ
Sbjct: 13  VVTKKVKVSSHRQRNSYGKPWSFTLSRRPAVLCFSTGTDHRETEECFRPYDSSAGLRCAQ 72

Query: 114 SGDDEDDQPTVCRRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSRFYPVFLVSCSH 173
           +GDDEDDQPT C+RTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR           
Sbjct: 73  TGDDEDDQPTFCKRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR----------- 132

Query: 174 TLMLGIMRLDARARQDVAILGSEFLKLDARAREDTETIDRNVKKKAERLRRIATTLREKA 233
               GIMRL+ARARQDVAILGSEFLKLDARAREDTETIDRNVK+KAERLRRIATTLREKA
Sbjct: 133 ----GIMRLNARARQDVAILGSEFLKLDARAREDTETIDRNVKRKAERLRRIATTLREKA 192

Query: 234 QSSLKSAADEHWSDGALEADLRLADFRAKQRAMEDAMTALEFVKNIHDMMVRRMYKFPLS 293
           QSSLK+AADEHWSDGALEADLRLADFRAKQRAMEDA+ ALEFVKNIHDMMVR+MY FP S
Sbjct: 193 QSSLKNAADEHWSDGALEADLRLADFRAKQRAMEDALMALEFVKNIHDMMVRKMYNFPQS 252

Query: 294 NESAFPIANDMMGRIKLEKNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTD 353
           N+S FPIANDMM RIKL+KNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTD
Sbjct: 253 NQSGFPIANDMMDRIKLKKNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTD 312

Query: 354 PEELELLIRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMG 413
           PEELELLIRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMG
Sbjct: 313 PEELELLIRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMG 372

Query: 414 ALQRLAEDSNPAIAAAASNAIKELKKQWEIGEEDSWSFTLNQKATMEGNEADDDEDNADP 473
           ALQRLAED+NPAIAAAASNAIKELKKQWEIGE DSWSFT+NQKATMEG+EADDDE NADP
Sbjct: 373 ALQRLAEDNNPAIAAAASNAIKELKKQWEIGEGDSWSFTVNQKATMEGSEADDDEGNADP 417

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BLAST of Lsi05G003590 vs. TrEMBL
Match: A9PHH3_POPTR (Senescence-associated family protein OS=Populus trichocarpa GN=POPTR_0017s02970g PE=2 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 1.6e-153
Identity = 307/474 (64.77%), Postives = 354/474 (74.68%), Query Frame = 1


Query: 1   MALTAIKVSSSPVVTSKATVSNSYGVFSSLSKS-EREKLNPSSCRVDIGEPHGC-LLTAK 60
           MAL A KVSSSP VT +   S S+G+  S SKS ++ KL+P+   +++ +     LLTAK
Sbjct: 1   MALNASKVSSSPFVTQRKLTSTSHGIICSFSKSFQKNKLHPTHQGIELQQLSSKHLLTAK 60

Query: 61  VKVSSHGWRNSYGKPWSFTLSRRPAVLCFSTGTHHTETEEFARPYDSSAGLRCAQSGDDE 120
           +  S    +  +GKP S  +SRR + LC ST TH TE +E  RPY  S+    AQ G+ E
Sbjct: 61  LAFSGESLQGIHGKPVSLIISRRSSTLCQSTRTHRTEEKECTRPYSDSSDSSRAQVGEKE 120

Query: 121 DDQPTVCRRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSRFYPVFLVSCSHTLMLG 180
           D+   +  RTI S   + EACRF YNDAKFVNERARNDI+LLSR               G
Sbjct: 121 DEHQLMSGRTIHSCHALAEACRFVYNDAKFVNERARNDIILLSR---------------G 180

Query: 181 IMRLDARARQDVAILGSEFLKLDARAREDTETIDRNVKKKAERLRRIATTLREKAQSSLK 240
           I RLDARAR+ VAILGS FLKLDARAREDTE IDR+VK+KAERL  IAT ++++AQ+ LK
Sbjct: 181 ISRLDARARKGVAILGSGFLKLDARAREDTEKIDRDVKEKAERLHHIATIIKDRAQTKLK 240

Query: 241 SAADEHWSDGALEADLRLADFRAKQRAMEDAMTALEFVKNIHDMMVRRMYKFPLSNESAF 300
           +AAD+HWSDGALEADLRLADFRAKQRAMEDA+ ALEFVKNIH++MV +MYKFPL  E   
Sbjct: 241 TAADKHWSDGALEADLRLADFRAKQRAMEDALMALEFVKNIHELMVSKMYKFPLRKEEGS 300

Query: 301 PIANDMMGRIKLEKNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTDPEELE 360
             AN ++G I LEKNG++LDF  GE+STDRI+AIQE YWSMASALSEADGIDYTDPEELE
Sbjct: 301 LTANGILGNIMLEKNGRTLDFFPGEVSTDRITAIQEAYWSMASALSEADGIDYTDPEELE 360

Query: 361 LLIRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMGALQRL 420
           LL+ TL+DLDAMDGK SVSLLAECS+SPD NTRQALANALAAAPSMWTLGNAGMGALQRL
Sbjct: 361 LLVTTLIDLDAMDGKGSVSLLAECSNSPDVNTRQALANALAAAPSMWTLGNAGMGALQRL 420

Query: 421 AEDSNPAIAAAASNAIKELKKQWEIGEEDSWSFTLNQKATMEGNEADDDEDNAD 473
           AED NPAIA AAS  I ELKKQWEI E DSW F +NQK      E D  EDN D
Sbjct: 421 AEDKNPAIANAASKTIHELKKQWEIQEGDSWRFMMNQKPV---EEVDSQEDNND 456

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BLAST of Lsi05G003590 vs. TrEMBL
Match: D7TSN5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g00910 PE=4 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 5.1e-152
Identity = 308/470 (65.53%), Postives = 353/470 (75.11%), Query Frame = 1


Query: 1   MALTAIKVSSSPVVTSKATVSNSYGVFSSLSKSERE-KLNPSSCRVDIG-EPHGCLLTAK 60
           MALTA K SSSPV T + ++S S G  SS SKS +   L+  +  V++  +  G LLTA+
Sbjct: 1   MALTASKFSSSPVATDRTSISKSQGTISSFSKSIKHCGLHSKNQGVELRRQSSGHLLTAR 60

Query: 61  VKVSSHGWRNSYGKPWSFTLSRRPAVLCFSTGTHHTETEEFARPYDSSAGLRCAQSGDDE 120
            + S+ G+ +  GK   +  SR  +VLC+ TGTH TE ++    Y   + +   Q  D+E
Sbjct: 61  YRFSNKGFWHICGKTGHYFSSRGSSVLCWLTGTHKTEAKQCVEHYSDRSDIPSVQLEDEE 120

Query: 121 DDQPTVCRRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSRFYPVFLVSCSHTLMLG 180
           D+   +  R I SN G+ EAC+F YNDAKFVNERARND+VLLSR               G
Sbjct: 121 DENLVMPERIIHSNQGLAEACKFVYNDAKFVNERARNDMVLLSR---------------G 180

Query: 181 IMRLDARARQDVAILGSEFLKLDARAREDTETIDRNVKKKAERLRRIATTLREKAQSSLK 240
           IMRLDARARQDVAILGSEFLKLDARAREDTE ID  VKKKAERL  IAT L++KAQS LK
Sbjct: 181 IMRLDARARQDVAILGSEFLKLDARAREDTEKIDHGVKKKAERLHHIATILKDKAQSRLK 240

Query: 241 SAADEHWSDGALEADLRLADFRAKQRAMEDAMTALEFVKNIHDMMVRRMYKFPLSNESAF 300
           SAAD+HWSDGALEADLR ADF AKQRAMEDA+ ALEFVKNIHDMMV +MYK     +   
Sbjct: 241 SAADKHWSDGALEADLRRADFCAKQRAMEDALMALEFVKNIHDMMVSKMYKL----KKGT 300

Query: 301 PIANDMMGRIKLEKNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTDPEELE 360
           P +ND MG I LEKNGK+LDF  GE+STDRI+AIQE+Y SMASALSEADGIDYTDPEELE
Sbjct: 301 PSSNDTMGHIMLEKNGKTLDFFPGEVSTDRITAIQEVYLSMASALSEADGIDYTDPEELE 360

Query: 361 LLIRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMGALQRL 420
           LL+ TL+DLDAMDGKSSVSLLAECSSSPD NTRQALANALAAAPSMWTLGNAGMGALQRL
Sbjct: 361 LLVTTLIDLDAMDGKSSVSLLAECSSSPDVNTRQALANALAAAPSMWTLGNAGMGALQRL 420

Query: 421 AEDSNPAIAAAASNAIKELKKQWEIGEEDSWSFTLNQKATMEGNEADDDE 469
           AEDSNPAIA AAS AI ELKKQWEI E DSW FT+NQK   E ++ +D +
Sbjct: 421 AEDSNPAIAVAASKAIYELKKQWEIEEGDSWRFTMNQKPMKEADDVEDTD 451

[Close]

BLAST of Lsi05G003590 vs. TrEMBL
Match: V4UVT2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011587mg PE=4 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 1.1e-151
Identity = 308/474 (64.98%), Postives = 359/474 (75.74%), Query Frame = 1


Query: 1   MALTAIKVSSSPVVTSKATVSNSYGVFSSLSKSE-REKLNPSSCRVDIGE-PHGCLLTAK 60
           MALTA KVS+ PVV+ +   S S+G+  S +K+  + KL P+   +++ +   G L   K
Sbjct: 31  MALTASKVSNGPVVSKEIITSRSHGIVYSFAKTTVQHKLCPAIQGIELQQLSDGHLSAPK 90

Query: 61  VKVSSHGWRNSYGKPWSFTLSRRPAVLCFSTGTHHTETEEFARPYDSSAGLRCAQSGDDE 120
           +  S+ G  +  GKP SF +SRR ++LCFS GT + E +E  RPY  S+ +   Q  +DE
Sbjct: 91  MSFSNEGLSSLSGKPISF-VSRRSSILCFSNGTRNAEAKECIRPYGDSSDVSSMQVAEDE 150

Query: 121 DDQPTVCRRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSRFYPVFLVSCSHTLMLG 180
           D+ P +  RTI S+  + EAC+F YNDAKFVNERARNDIVLLSR                
Sbjct: 151 DEHPVMPGRTIHSSQVLAEACKFVYNDAKFVNERARNDIVLLSR---------------S 210

Query: 181 IMRLDARARQDVAILGSEFLKLDARAREDTETIDRNVKKKAERLRRIATTLREKAQSSLK 240
           IMRLDARARQD+AILGSEFLKL+ARAREDTE IDR+VK+KAE L  IAT L++KA+S LK
Sbjct: 211 IMRLDARARQDMAILGSEFLKLNARAREDTEKIDRDVKQKAECLHHIATILKDKAESRLK 270

Query: 241 SAADEHWSDGALEADLRLADFRAKQRAMEDAMTALEFVKNIHDMMVRRMYKFPLSNESAF 300
            AAD+HWSDGALEADLR ADFRAKQRAMEDA+ ALEF+KNIHDMMVR+MYKFPL  E   
Sbjct: 271 HAADKHWSDGALEADLRRADFRAKQRAMEDALMALEFLKNIHDMMVRKMYKFPLRREKIS 330

Query: 301 PIANDMMGRIKLEKNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTDPEELE 360
               +MMG I LEKNGK+LDF  GE+STDRI+AIQE YWSMASALSEADGIDYTDPEELE
Sbjct: 331 LSDPEMMGCIMLEKNGKTLDFFPGEVSTDRITAIQEAYWSMASALSEADGIDYTDPEELE 390

Query: 361 LLIRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMGALQRL 420
           LL+ TL+ LDAMDGKSSVSLLAECSSSPD NTRQALANALAAAPSMWTLGNAGMGALQRL
Sbjct: 391 LLVTTLIGLDAMDGKSSVSLLAECSSSPDVNTRQALANALAAAPSMWTLGNAGMGALQRL 450

Query: 421 AEDSNPAIAAAASNAIKELKKQWEIGEEDSWSFTLNQKATMEGNEADDDEDNAD 473
           A+DSNPAIAAAAS  I ELKKQWEI E DSW F +N K   EG E ++  D+AD
Sbjct: 451 AKDSNPAIAAAASKTIFELKKQWEIEEGDSWRFMMNPKPA-EGEETEEASDDAD 487

[Close]

BLAST of Lsi05G003590 vs. TrEMBL
Match: V4T2R2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011587mg PE=4 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 1.1e-151
Identity = 308/474 (64.98%), Postives = 359/474 (75.74%), Query Frame = 1


Query: 1   MALTAIKVSSSPVVTSKATVSNSYGVFSSLSKSE-REKLNPSSCRVDIGE-PHGCLLTAK 60
           MALTA KVS+ PVV+ +   S S+G+  S +K+  + KL P+   +++ +   G L   K
Sbjct: 1   MALTASKVSNGPVVSKEIITSRSHGIVYSFAKTTVQHKLCPAIQGIELQQLSDGHLSAPK 60

Query: 61  VKVSSHGWRNSYGKPWSFTLSRRPAVLCFSTGTHHTETEEFARPYDSSAGLRCAQSGDDE 120
           +  S+ G  +  GKP SF +SRR ++LCFS GT + E +E  RPY  S+ +   Q  +DE
Sbjct: 61  MSFSNEGLSSLSGKPISF-VSRRSSILCFSNGTRNAEAKECIRPYGDSSDVSSMQVAEDE 120

Query: 121 DDQPTVCRRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSRFYPVFLVSCSHTLMLG 180
           D+ P +  RTI S+  + EAC+F YNDAKFVNERARNDIVLLSR                
Sbjct: 121 DEHPVMPGRTIHSSQVLAEACKFVYNDAKFVNERARNDIVLLSR---------------S 180

Query: 181 IMRLDARARQDVAILGSEFLKLDARAREDTETIDRNVKKKAERLRRIATTLREKAQSSLK 240
           IMRLDARARQD+AILGSEFLKL+ARAREDTE IDR+VK+KAE L  IAT L++KA+S LK
Sbjct: 181 IMRLDARARQDMAILGSEFLKLNARAREDTEKIDRDVKQKAECLHHIATILKDKAESRLK 240

Query: 241 SAADEHWSDGALEADLRLADFRAKQRAMEDAMTALEFVKNIHDMMVRRMYKFPLSNESAF 300
            AAD+HWSDGALEADLR ADFRAKQRAMEDA+ ALEF+KNIHDMMVR+MYKFPL  E   
Sbjct: 241 HAADKHWSDGALEADLRRADFRAKQRAMEDALMALEFLKNIHDMMVRKMYKFPLRREKIS 300

Query: 301 PIANDMMGRIKLEKNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTDPEELE 360
               +MMG I LEKNGK+LDF  GE+STDRI+AIQE YWSMASALSEADGIDYTDPEELE
Sbjct: 301 LSDPEMMGCIMLEKNGKTLDFFPGEVSTDRITAIQEAYWSMASALSEADGIDYTDPEELE 360

Query: 361 LLIRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMGALQRL 420
           LL+ TL+ LDAMDGKSSVSLLAECSSSPD NTRQALANALAAAPSMWTLGNAGMGALQRL
Sbjct: 361 LLVTTLIGLDAMDGKSSVSLLAECSSSPDVNTRQALANALAAAPSMWTLGNAGMGALQRL 420

Query: 421 AEDSNPAIAAAASNAIKELKKQWEIGEEDSWSFTLNQKATMEGNEADDDEDNAD 473
           A+DSNPAIAAAAS  I ELKKQWEI E DSW F +N K   EG E ++  D+AD
Sbjct: 421 AKDSNPAIAAAASKTIFELKKQWEIEEGDSWRFMMNPKPA-EGEETEEASDDAD 457

[Close]

BLAST of Lsi05G003590 vs. TAIR10
Match: AT1G66330.1 (AT1G66330.1 senescence-associated family protein)

HSP 1 Score: 420.6 bits (1080), Expect = 1.3e-117
Identity = 249/398 (62.56%), Postives = 286/398 (71.86%), Query Frame = 1


Query: 72  KPWSFTLSRRPAVLCFSTGTHHTETEEFARPYDSSAGLRCAQSGDDEDDQPTVCRRTIKS 131
           K  +F  SRR + LCF   +  TET             +  Q   ++   P   R++  S
Sbjct: 55  KTVTFVSSRRCSTLCFVGKSQDTETNS-----------QVVQKEGEKQVMPR--RKSSNS 114

Query: 132 NPGIVEACRFAYNDAKFVNERARNDIVLLSRFYPVFLVSCSHTLMLGIMRLDARARQDVA 191
           +  +VE   +  NDAKFVNERARND VLLSR               GIMRLDARARQDVA
Sbjct: 115 SQLLVE---YVSNDAKFVNERARNDFVLLSR---------------GIMRLDARARQDVA 174

Query: 192 ILGSEFLKLDARAREDTETIDRNVKKKAERLRRIATTLREKAQSSLKSAADEHWSDGALE 251
           ILGS FLKLDARAREDTE IDR+VK+KAERL  IAT  +  A+S LK+AAD+HWSDGALE
Sbjct: 175 ILGSGFLKLDARAREDTEKIDRDVKRKAERLHHIATIFKNIAESKLKNAADKHWSDGALE 234

Query: 252 ADLRLADFRAKQRAMEDAMTALEFVKNIHDMMVRRMYKFPLSNESAFPIANDMMGRIKLE 311
           ADLR ADFRAKQRAMEDA+ ALEF+KNIHDMMV +M    +++E+          RI LE
Sbjct: 235 ADLRRADFRAKQRAMEDALMALEFIKNIHDMMVNKMVDSLVTSETG------TTDRISLE 294

Query: 312 KNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTDPEELELLIRTLMDLDAMD 371
           KNG +L F  GE+S+DRISAI+E Y SMASALSEADGIDYTDPEELELL+ TL+DLDAMD
Sbjct: 295 KNGIALGFFPGEVSSDRISAIEEAYKSMASALSEADGIDYTDPEELELLVTTLIDLDAMD 354

Query: 372 GKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMGALQRLAEDSNPAIAAAAS 431
           GKSS SLLAECSSSPD NTR+ALANALAAAPSMWTLGNAGMGALQRLAEDSNPAIAAAAS
Sbjct: 355 GKSSASLLAECSSSPDVNTRKALANALAAAPSMWTLGNAGMGALQRLAEDSNPAIAAAAS 414

Query: 432 NAIKELKKQWEIGEEDSWSFTLNQKATMEGNEADDDED 470
            AI  LKKQWE+ E DS  F +N +   + ++ D D D
Sbjct: 415 RAINALKKQWEVEEGDSLRFMMNFERPNDDDDVDSDLD 415

[Close]

BLAST of Lsi05G003590 vs. NCBI nr
Match: gi|778680723|ref|XP_011651381.1| (PREDICTED: uncharacterized protein LOC101207516 isoform X1 [Cucumis sativus])

HSP 1 Score: 813.5 bits (2100), Expect = 1.9e-232
Identity = 429/473 (90.70%), Postives = 441/473 (93.23%), Query Frame = 1


Query: 1   MALTAIKVSSSPVVTSKATVSNSYGVFSSLSKSEREKLNPSSCRVDIGEPHGCLLTAKVK 60
           MALTAIKVSSSPVVTSKA VSNSYGVFSSLSKSEREKLNPSSCRVDIGE HGCLLT KVK
Sbjct: 21  MALTAIKVSSSPVVTSKAIVSNSYGVFSSLSKSEREKLNPSSCRVDIGELHGCLLTEKVK 80

Query: 61  VSSHGWRNSYGKPWSFTLSRRPAVLCFSTGTHHTETEEFARPYDSSAGLRCAQSGDDEDD 120
           VSSH  RNSYGKPWSFTLSRRPAVLCFSTGT H ETEE  RPYDSSAGLRCAQ+GDDEDD
Sbjct: 81  VSSHRQRNSYGKPWSFTLSRRPAVLCFSTGTDHRETEECFRPYDSSAGLRCAQTGDDEDD 140

Query: 121 QPTVCRRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSRFYPVFLVSCSHTLMLGIM 180
           QPT C+RTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR               GIM
Sbjct: 141 QPTFCKRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR---------------GIM 200

Query: 181 RLDARARQDVAILGSEFLKLDARAREDTETIDRNVKKKAERLRRIATTLREKAQSSLKSA 240
           RL+ARARQDVAILGSEFLKLDARAREDTETIDRNVK+KAERLRRIATTLREKAQSSLK+A
Sbjct: 201 RLNARARQDVAILGSEFLKLDARAREDTETIDRNVKRKAERLRRIATTLREKAQSSLKNA 260

Query: 241 ADEHWSDGALEADLRLADFRAKQRAMEDAMTALEFVKNIHDMMVRRMYKFPLSNESAFPI 300
           ADEHWSDGALEADLRLADFRAKQRAMEDA+ ALEFVKNIHDMMVR+MY FP SN+S FPI
Sbjct: 261 ADEHWSDGALEADLRLADFRAKQRAMEDALMALEFVKNIHDMMVRKMYNFPQSNQSGFPI 320

Query: 301 ANDMMGRIKLEKNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTDPEELELL 360
           ANDMM RIKL+KNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTDPEELELL
Sbjct: 321 ANDMMDRIKLKKNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTDPEELELL 380

Query: 361 IRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMGALQRLAE 420
           IRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMGALQRLAE
Sbjct: 381 IRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMGALQRLAE 440

Query: 421 DSNPAIAAAASNAIKELKKQWEIGEEDSWSFTLNQKATMEGNEADDDEDNADP 474
           D+NPAIAAAASNAIKELKKQWEIGE DSWSFT+NQKATMEG+EADDDE NADP
Sbjct: 441 DNNPAIAAAASNAIKELKKQWEIGEGDSWSFTVNQKATMEGSEADDDEGNADP 478

[Close]

BLAST of Lsi05G003590 vs. NCBI nr
Match: gi|778680726|ref|XP_011651382.1| (PREDICTED: uncharacterized protein LOC101207516 isoform X2 [Cucumis sativus])

HSP 1 Score: 813.5 bits (2100), Expect = 1.9e-232
Identity = 429/473 (90.70%), Postives = 441/473 (93.23%), Query Frame = 1


Query: 1   MALTAIKVSSSPVVTSKATVSNSYGVFSSLSKSEREKLNPSSCRVDIGEPHGCLLTAKVK 60
           MALTAIKVSSSPVVTSKA VSNSYGVFSSLSKSEREKLNPSSCRVDIGE HGCLLT KVK
Sbjct: 1   MALTAIKVSSSPVVTSKAIVSNSYGVFSSLSKSEREKLNPSSCRVDIGELHGCLLTEKVK 60

Query: 61  VSSHGWRNSYGKPWSFTLSRRPAVLCFSTGTHHTETEEFARPYDSSAGLRCAQSGDDEDD 120
           VSSH  RNSYGKPWSFTLSRRPAVLCFSTGT H ETEE  RPYDSSAGLRCAQ+GDDEDD
Sbjct: 61  VSSHRQRNSYGKPWSFTLSRRPAVLCFSTGTDHRETEECFRPYDSSAGLRCAQTGDDEDD 120

Query: 121 QPTVCRRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSRFYPVFLVSCSHTLMLGIM 180
           QPT C+RTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR               GIM
Sbjct: 121 QPTFCKRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR---------------GIM 180

Query: 181 RLDARARQDVAILGSEFLKLDARAREDTETIDRNVKKKAERLRRIATTLREKAQSSLKSA 240
           RL+ARARQDVAILGSEFLKLDARAREDTETIDRNVK+KAERLRRIATTLREKAQSSLK+A
Sbjct: 181 RLNARARQDVAILGSEFLKLDARAREDTETIDRNVKRKAERLRRIATTLREKAQSSLKNA 240

Query: 241 ADEHWSDGALEADLRLADFRAKQRAMEDAMTALEFVKNIHDMMVRRMYKFPLSNESAFPI 300
           ADEHWSDGALEADLRLADFRAKQRAMEDA+ ALEFVKNIHDMMVR+MY FP SN+S FPI
Sbjct: 241 ADEHWSDGALEADLRLADFRAKQRAMEDALMALEFVKNIHDMMVRKMYNFPQSNQSGFPI 300

Query: 301 ANDMMGRIKLEKNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTDPEELELL 360
           ANDMM RIKL+KNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTDPEELELL
Sbjct: 301 ANDMMDRIKLKKNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTDPEELELL 360

Query: 361 IRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMGALQRLAE 420
           IRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMGALQRLAE
Sbjct: 361 IRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMGALQRLAE 420

Query: 421 DSNPAIAAAASNAIKELKKQWEIGEEDSWSFTLNQKATMEGNEADDDEDNADP 474
           D+NPAIAAAASNAIKELKKQWEIGE DSWSFT+NQKATMEG+EADDDE NADP
Sbjct: 421 DNNPAIAAAASNAIKELKKQWEIGEGDSWSFTVNQKATMEGSEADDDEGNADP 458

[Close]

BLAST of Lsi05G003590 vs. NCBI nr
Match: gi|659114299|ref|XP_008457000.1| (PREDICTED: uncharacterized protein LOC103496788 isoform X1 [Cucumis melo])

HSP 1 Score: 804.3 bits (2076), Expect = 1.2e-229
Identity = 426/474 (89.87%), Postives = 437/474 (92.19%), Query Frame = 1


Query: 1   MALTAIKVSSSPVVTSKATVSNSYGVFSSLSKSEREKLNPSSCRVDIGEPHGCLLTAKVK 60
           MALTAIKVSSSPVVTSKA VSNSYGVFSSLSKSEREKLNPSSCRVDIGE HGCLLTAKVK
Sbjct: 1   MALTAIKVSSSPVVTSKAIVSNSYGVFSSLSKSEREKLNPSSCRVDIGELHGCLLTAKVK 60

Query: 61  VSSHGWRNSYGKPWSFTLSRRPAVLCFSTGTHHTETEEFARPYDSSAGLRCAQSGDDEDD 120
           VSS G RNSYGK W FT+SRRPAVLCFSTGT  TETEE  RPYDSSAGLRCAQ+GDDEDD
Sbjct: 61  VSSRGQRNSYGKSWRFTMSRRPAVLCFSTGTDRTETEECFRPYDSSAGLRCAQTGDDEDD 120

Query: 121 QPTVCRRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSRFYPVFLVSCSHTLMLGIM 180
           QPTVC R IKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR               GIM
Sbjct: 121 QPTVCERAIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR---------------GIM 180

Query: 181 RLDARARQDVAILGSEFLKLDARAREDTETIDRNVKKKAERLRRIATTLREKAQSSLKSA 240
           RLDARARQDVAILGSEFLKLDARAREDTETIDRNVKKKAERLRRIA TLREKA+SSLKSA
Sbjct: 181 RLDARARQDVAILGSEFLKLDARAREDTETIDRNVKKKAERLRRIAATLREKARSSLKSA 240

Query: 241 ADEHWSDGALEADLRLADFRAKQRAMEDAMTALEFVKNIHDMMVRRMYKFPLSNESAFPI 300
           ADEHWS GALEADLRLADFRAKQRAMEDA+ ALEFVKNIHDMMVR+MY FP SN+S FPI
Sbjct: 241 ADEHWSAGALEADLRLADFRAKQRAMEDALMALEFVKNIHDMMVRKMYNFPQSNQSGFPI 300

Query: 301 ANDMMGRIKLEKNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTDPEELELL 360
            NDMM RIKL+KNGKSLDFLT ELSTDRISAIQEIYWSMASALSEADGIDYTDPEELELL
Sbjct: 301 PNDMMDRIKLKKNGKSLDFLTSELSTDRISAIQEIYWSMASALSEADGIDYTDPEELELL 360

Query: 361 IRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMGALQRLAE 420
           IRTLMDLDAMDGKSSVSLLAECSSSP+ENTRQALANALAAAPSMWTLGNAGMGALQRLAE
Sbjct: 361 IRTLMDLDAMDGKSSVSLLAECSSSPNENTRQALANALAAAPSMWTLGNAGMGALQRLAE 420

Query: 421 DSNPAIAAAASNAIKELKKQWEIGEEDSWSFTLNQKATMEGNEADDDEDNADPL 475
           D+NPAIAAAASNAIKELKKQWEIGE DSWSFT+NQKATMEG+EADDDEDNADPL
Sbjct: 421 DNNPAIAAAASNAIKELKKQWEIGEGDSWSFTVNQKATMEGSEADDDEDNADPL 459

[Close]

BLAST of Lsi05G003590 vs. NCBI nr
Match: gi|778680734|ref|XP_011651385.1| (PREDICTED: uncharacterized protein LOC101207516 isoform X4 [Cucumis sativus])

HSP 1 Score: 719.9 bits (1857), Expect = 2.9e-204
Identity = 376/420 (89.52%), Postives = 390/420 (92.86%), Query Frame = 1


Query: 54  LLTAKVKVSSHGWRNSYGKPWSFTLSRRPAVLCFSTGTHHTETEEFARPYDSSAGLRCAQ 113
           ++T KVKVSSH  RNSYGKPWSFTLSRRPAVLCFSTGT H ETEE  RPYDSSAGLRCAQ
Sbjct: 13  VVTKKVKVSSHRQRNSYGKPWSFTLSRRPAVLCFSTGTDHRETEECFRPYDSSAGLRCAQ 72

Query: 114 SGDDEDDQPTVCRRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSRFYPVFLVSCSH 173
           +GDDEDDQPT C+RTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR           
Sbjct: 73  TGDDEDDQPTFCKRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR----------- 132

Query: 174 TLMLGIMRLDARARQDVAILGSEFLKLDARAREDTETIDRNVKKKAERLRRIATTLREKA 233
               GIMRL+ARARQDVAILGSEFLKLDARAREDTETIDRNVK+KAERLRRIATTLREKA
Sbjct: 133 ----GIMRLNARARQDVAILGSEFLKLDARAREDTETIDRNVKRKAERLRRIATTLREKA 192

Query: 234 QSSLKSAADEHWSDGALEADLRLADFRAKQRAMEDAMTALEFVKNIHDMMVRRMYKFPLS 293
           QSSLK+AADEHWSDGALEADLRLADFRAKQRAMEDA+ ALEFVKNIHDMMVR+MY FP S
Sbjct: 193 QSSLKNAADEHWSDGALEADLRLADFRAKQRAMEDALMALEFVKNIHDMMVRKMYNFPQS 252

Query: 294 NESAFPIANDMMGRIKLEKNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTD 353
           N+S FPIANDMM RIKL+KNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTD
Sbjct: 253 NQSGFPIANDMMDRIKLKKNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTD 312

Query: 354 PEELELLIRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMG 413
           PEELELLIRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMG
Sbjct: 313 PEELELLIRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMG 372

Query: 414 ALQRLAEDSNPAIAAAASNAIKELKKQWEIGEEDSWSFTLNQKATMEGNEADDDEDNADP 473
           ALQRLAED+NPAIAAAASNAIKELKKQWEIGE DSWSFT+NQKATMEG+EADDDE NADP
Sbjct: 373 ALQRLAEDNNPAIAAAASNAIKELKKQWEIGEGDSWSFTVNQKATMEGSEADDDEGNADP 417

[Close]

BLAST of Lsi05G003590 vs. NCBI nr
Match: gi|778680731|ref|XP_011651384.1| (PREDICTED: uncharacterized protein LOC101207516 isoform X3 [Cucumis sativus])

HSP 1 Score: 719.9 bits (1857), Expect = 2.9e-204
Identity = 376/420 (89.52%), Postives = 390/420 (92.86%), Query Frame = 1


Query: 54  LLTAKVKVSSHGWRNSYGKPWSFTLSRRPAVLCFSTGTHHTETEEFARPYDSSAGLRCAQ 113
           ++T KVKVSSH  RNSYGKPWSFTLSRRPAVLCFSTGT H ETEE  RPYDSSAGLRCAQ
Sbjct: 33  VVTKKVKVSSHRQRNSYGKPWSFTLSRRPAVLCFSTGTDHRETEECFRPYDSSAGLRCAQ 92

Query: 114 SGDDEDDQPTVCRRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSRFYPVFLVSCSH 173
           +GDDEDDQPT C+RTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR           
Sbjct: 93  TGDDEDDQPTFCKRTIKSNPGIVEACRFAYNDAKFVNERARNDIVLLSR----------- 152

Query: 174 TLMLGIMRLDARARQDVAILGSEFLKLDARAREDTETIDRNVKKKAERLRRIATTLREKA 233
               GIMRL+ARARQDVAILGSEFLKLDARAREDTETIDRNVK+KAERLRRIATTLREKA
Sbjct: 153 ----GIMRLNARARQDVAILGSEFLKLDARAREDTETIDRNVKRKAERLRRIATTLREKA 212

Query: 234 QSSLKSAADEHWSDGALEADLRLADFRAKQRAMEDAMTALEFVKNIHDMMVRRMYKFPLS 293
           QSSLK+AADEHWSDGALEADLRLADFRAKQRAMEDA+ ALEFVKNIHDMMVR+MY FP S
Sbjct: 213 QSSLKNAADEHWSDGALEADLRLADFRAKQRAMEDALMALEFVKNIHDMMVRKMYNFPQS 272

Query: 294 NESAFPIANDMMGRIKLEKNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTD 353
           N+S FPIANDMM RIKL+KNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTD
Sbjct: 273 NQSGFPIANDMMDRIKLKKNGKSLDFLTGELSTDRISAIQEIYWSMASALSEADGIDYTD 332

Query: 354 PEELELLIRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMG 413
           PEELELLIRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMG
Sbjct: 333 PEELELLIRTLMDLDAMDGKSSVSLLAECSSSPDENTRQALANALAAAPSMWTLGNAGMG 392

Query: 414 ALQRLAEDSNPAIAAAASNAIKELKKQWEIGEEDSWSFTLNQKATMEGNEADDDEDNADP 473
           ALQRLAED+NPAIAAAASNAIKELKKQWEIGE DSWSFT+NQKATMEG+EADDDE NADP
Sbjct: 393 ALQRLAEDNNPAIAAAASNAIKELKKQWEIGEGDSWSFTVNQKATMEGSEADDDEGNADP 437

The following BLAST results are available for this feature:

BLAST of Lsi05G003590 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G003590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAR4_CUCSA	2.0e-204	89.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G284030 PE=4 SV=1	[more]
A9PHH3_POPTR	1.6e-153	64.77	Senescence-associated family protein OS=Populus trichocarpa GN=POPTR_0017s02970g...	[more]
D7TSN5_VITVI	5.1e-152	65.53	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g00910 PE=4 SV=...	[more]
V4UVT2_9ROSI	1.1e-151	64.98	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011587mg PE=4 SV=1	[more]
V4T2R2_9ROSI	1.1e-151	64.98	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011587mg PE=4 SV=1	[more]

BLAST of Lsi05G003590 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G66330.1	1.3e-117	62.56	senescence-associated family protein	[more]

BLAST of Lsi05G003590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680723\|ref\|XP_011651381.1\|	1.9e-232	90.70	PREDICTED: uncharacterized protein LOC101207516 isoform X1 [Cucumis sativus]	[more]
gi\|778680726\|ref\|XP_011651382.1\|	1.9e-232	90.70	PREDICTED: uncharacterized protein LOC101207516 isoform X2 [Cucumis sativus]	[more]
gi\|659114299\|ref\|XP_008457000.1\|	1.2e-229	89.87	PREDICTED: uncharacterized protein LOC103496788 isoform X1 [Cucumis melo]	[more]
gi\|778680734\|ref\|XP_011651385.1\|	2.9e-204	89.52	PREDICTED: uncharacterized protein LOC101207516 isoform X4 [Cucumis sativus]	[more]
gi\|778680731\|ref\|XP_011651384.1\|	2.9e-204	89.52	PREDICTED: uncharacterized protein LOC101207516 isoform X3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0048731	system development
biological_process	GO:0034599	cellular response to oxidative stress
biological_process	GO:0010150	leaf senescence
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0072593	reactive oxygen species metabolic process
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0044699	single-organism process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G003590.1	Lsi05G003590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 376..437 score: 2.
None	No IPR available	PANTHER	PTHR36725	FAMILY NOT NAMED	coord: 1..162 score: 1.3E-211coord: 178..474 score: 1.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G003590	Csa3G284030	Cucumber (Chinese Long) v2	culsiB206
Lsi05G003590	CSPI03G20840	Wild cucumber (PI 183967)	cpilsiB203
Lsi05G003590	CmaCh14G008220	Cucurbita maxima (Rimu)	cmalsiB249
Lsi05G003590	CmoCh14G008370	Cucurbita moschata (Rifu)	cmolsiB237
Lsi05G003590	Cla013220	Watermelon (97103) v1	lsiwmB361
Lsi05G003590	MELO3C020192	Melon (DHL92) v3.5.1	lsimeB385
Lsi05G003590	ClCG05G011500	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G003590	MELO3C020192.2	Melon (DHL92) v3.6.1	lsimedB406
Lsi05G003590	Cla97C05G093570	Watermelon (97103) v2	lsiwmbB329
Lsi05G003590	Bhi01G001495	Wax gourd	lsiwgoB441
Lsi05G003590	Cp4.1LG03g06230	Cucurbita pepo (Zucchini)	cpelsiB511
Lsi05G003590	CsGy3G020440	Cucumber (Gy14) v2	cgyblsiB190
Lsi05G003590	Carg22259	Silver-seed gourd	carlsiB435
Lsi05G003590	CsaV3_3G020810	Cucumber (Chinese Long) v3	cuclsiB225

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G003590	Wax gourd	lsiwgoB447
Lsi05G003590	Cucurbita maxima (Rimu)	cmalsiB440
Lsi05G003590	Cucurbita moschata (Rifu)	cmolsiB430
Lsi05G003590	Cucurbita pepo (Zucchini)	cpelsiB470
Lsi05G003590	Wild cucumber (PI 183967)	cpilsiB210
Lsi05G003590	Cucumber (Chinese Long) v2	culsiB212
Lsi05G003590	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G003590	Cucumber (Gy14) v2	cgyblsiB199
Lsi05G003590	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G003590	Silver-seed gourd	carlsiB700
Lsi05G003590	Cucumber (Chinese Long) v3	cuclsiB231