Lsi05G003440 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G003440
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Protein SET DOMAIN GROUP 40
Location	chr05 : 4354513 .. 4360738 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGTTATTTGGCATTTGAAAAAAAAGGGCCAATTGATATTTTGGACCCAAATAGCAGGTCATTCGTATAAATTTCCCAAATATTTTGAACTTAAAAGCCAAATCTAAATTTGACTCAAAGCTTAAGGGATGGAAACGTATTTTTCCCTCAAGGGGCAGAGGTTTTGATGGAGGGTTTGTGAAATGGAAACTGAAGGAAGTTTTGGAAGCCTGCTGAGATGGGCGGCGGATCATGGAATTTCAGATCCTGTCGACCAACAGACTTCACATTCTTGTTTGGGTCGTTCTTTGTGCGTCTGTTTCTTCCCTGATGCCGGCGGGTACGCTCTGATTTCTCCTTTTCTAGTTACATCGCTCTTTTCTTTCTTTCGCCGCTTGTAAGTTGTTCATTTTGAGGGAAATTTTGCTTCAGGAGAGGTTTAGGGGCTGTTCGTCAGCTTAACAAAGGAGAGTTAGTGCTGAGAGTTCCAAAATCTGTCTTGTTAACGACCCAAAGTTTGTCGTTGGAAGATGAGAAGCTCGCCATGGCTCTGAAGAGATACCCATCTCTTTCTTCTACTCAGGTTCTTCCTTTGCTAACATAATTAGAACGAACTTTTGTGAGAAAAAGGATGCTTCCTTTTGTAGGTTTGGTTTTTTTTTTTTTCTTTTTTTTTTCTTTTTTTTTTTTTTTTTGTATGCCTCGTAAGTTGGTCTTTGAGGGAGGGGACTATCAGATACATGAGGCACCTCCCTGTGCCTAATGAGGTAGGTTTTGAAAGTGATTACAGCCCAAAAAGTGATTACATTTCAAAGTAGGAGAGATATGGAATGGAAAATAGAAGGGATCTTTATACACGAGCGACCATAGGTATGCTTTTTTTTTTTTTTTTCTTCCTGATAGAAACAACTGTCTTCATTTAGAAAAAAAAAATGAAAGAATACAAGGGCATACAAAAAACCAAGCCCACCAAAGACCAAAGACCAAACCTTGCTAGGGTTTCTCTCTACACCTTGAAACACTCTATTGTTCCTCTCCCCCCAAAGATTCCACAATAACGCACACACCCCTGCTAACCAAAGAAAACGACCTTTCTCTTTGAAGTGCGGATGGAGGAGGAACTTCCTGATGATCAACTGAACATCCCTCTGACGAGCAAGCAAAAAATCAAACGCTTGAAAGAAACCATTCCATACAGATCTCGCAAACTGACACTCCCATAGGAGGTGATCCATGTTTTCCTCCACCTTTCAACACAGGATACAACAAAAAGGACTCATTAAAGAAGATATCTTTCTCAAAATCCTATCCATCATGTTCACACAACCAAGCAAAACTTGCTTCGGAAAGAACTTAAACTTTCTTTGGAATTTTAATCCTCCATAAAACATCAAAGACTGACTCAACAAAAGGAGAGAGATCCAATAAAATCCAAAGAATGACTTACAAAAAAATCCCTCCAAAGGGTTAGGACTCCAAACACGAACATCCCTTCTCCCAAGCCTAAAGTTAAAAACCCTCAACAAGGAAAGAAGAGAAGCCACTTTCGTCGTTTCCCTATTGGACAACAGTCGACAGAAACCAAAGGAGAAAGAAACACAAGTTCCCCGACCAAACCAAAAAGTCCGACACGAAACAATTATTCAAGAAGGAAAAATGATGTAACCTAGAAAACACAGAAGAGAGAGGTCTATCCCATACCCAATGATCTTCCCAAAAATACGCTTCCTTACCATCTCCCACAACACAAAAAACAAGATGGAAAAAAGAAGGGAGCTGAATAGAACCACAAATTTCGGTGCGTGCCATTTAACCCCTCGCCACCCACTCACAGCGATGGGGACCATGTTTGCTCACAATAGTTCTCTGCCGTAGGTATGCTTAAAGATGTTTTATATTCCATTCTTTGTTAATGGTTAATCGTCCTTAATGCAACTGCGACAAAGATCTTAACTGATTTTAATTCTCTTTTATATTTAAGGTTTATCTAAAACATTTCTTGTGTGTTTATCTAAGACATTACCCATTTTCCCCTGTTAGTTCTAAAGGTGTACTAATATTAATTTCACAATCCCTCCCCCCCACTCAAATGCAGAAGTTGACTTTTTGTTTACTCTATGAGATTGGTAAAGGAACTAGTTCTTTGTGGCTCCCTTACTTAAAGCATTTGCCCCAGAGTTACGACATACTGGCAACTTTTGGAGAATTTGAAAAGCAAGCCCTGCAGGTTCAATTTTCCGTTTGTGGCATTTTTATTTATTTCTTAGGATTATATTCGTATTCGTGAACCATATTTAATTAGGATTTTTTACATGTGCTTTTGACATTTGTTTTATAATAAAATAGTCAAAGTCATTAACAGGTTGATTATGCTATCTGGGCAACAGAGAAGGCTGCTTTGAAATCTCGTACGGAGTGGAGAGGAGTCAAAGGACTAATGCAAGAGTCCAATATTAAAAACCAACTCCAAACATTCAAGGCATGGCTTTGGGCCTCTGCAACTGTAAGCACACTGGATTCATGCTAGAAGAATGTATTCCATAGCTAGATTGGACCTGGATTTGTTTTTTTTTTTGGGTAAGAAACCAAACTTTCATTGAGAAAAAAATGAGAGAAAGAAGGCATATGAAAAACAGCCAACAAAAAAAGGAGGATCCCCAACTAACTACAAAGAGGGCTCCAATCTAACAAATGCCAAATTCATAATTACAAAAGAGTATTAACAGACATATACTTATTACAAAAAACCTGCGTTTAGGTTTCTATTTTTTTTTAATAATTAATTATTTATTTGTTTGGTGAAAATTTTATGCATCATTTGAAGGTGGTTTAGCTGGATGTCCAAGGTCACTGCAAATATGCTTTTCTTATAGAAGAAAACACCACCAAGTGACACCCATTTGCTGATTATCTATCTTCCATTACCCATTACCTAAGAAGCACGGATACGGATACAAGACATGGATACGACACGGACACGGTGACACGCCATATTTTAAATATCTAGGACACGATACGACAATGACACGTTTAATAAAATATACATTTTTAAAAATATATATCATTTTCATACTAGAATAAAATTAAAATAAATGGGTTGATGCATTTATATGCTTAAAAGACTTAACTTGATGTATTTCACACTCAAAAGTTATTATTATTCTCATATATGTGTCTTCTTGGTCTACTCAACAAGTGTTCAATGCATGTCTAACATATTTGTTGTACTAACAAGTGTCCGATACGTGTCCAACAAGTGTCAGAGTGTCCAAGTGTCTGACACGTGTCGGACATGGACATGCTAGCCAAATTAAAGTGTCCGTGCTTCTTAGCCCATTACCTTGTAGTCCTGTACACATTACTCATTACCAGCCAGTAAGCATCATGACTTCTATTCGATCTAATATGCTCCCTCTCCCATCCCACCTTGCCCTCCCTAAAGTCCTGACCCCCTCACTTAAGGGCCCCCTTAACTTAGGTATTCTTTGTCTCCTTGAAATCTATGGACTGTAACTACTGTCATTGAACTTTGGTGGTATATAAAGGGACCTATATTACTGAAGTTGATGGTGGATGTCTATAAATGAAGCAAACCAAAGCTCTCTAATATTGGAAAGGATAAGTTTTTCTTCATCTCTCGTCAATGGAGCACTCTCGTGGATTCAAAATTGCTATGTAGGCCTGCTCCTCTTCCCTCTTAATGGTTTTTTCCCCCAAGAATTCTATAGTGAGGATTATGTGTTTGCATTGAATAAATCTCCTATAGGAAACACTAAAGAGACTACTGTTGATATCATTAAGCTGAACTCAAGAGACACATTTTATTCCATGTAGGACAGAATTGCTCAGGTCAGTTCTCCTCCTCATGAAAGATTACCCTTGTGCCACCCTGCCTCTAATAGTGGACTGTTTTTCTTCTGACTTGTGAAGTGGAAGTTGCTTGCACAAAGGCTTTTGGATCAGCCCAGACAAGGATACTAGGATGTTCGTTTAAGTACGATTGAATTTAGTACTCACATCCCTTCAATTTTTCCCATAGCTTTTTGTTGCCATAGAATATAGAATTCATCCTCTTTTTTATGGATGAGAATTGTCGAGACTTGAGAGTTTGTTTTGTAATTTTCTCTTAGCCCGTCTTTTGGAGGATATATTATCGTCCTCACTTGTATCTATTTTTAATGTTAATGCAATTATTTGGTTCTTATAGAAAAACGAGTGTTTCTTTATTTGTCTTCATGTGTTGTATGATGACTCTAAATGGCATGGTTTGGTCCGATGTACATTTTTTCAATCCTAATCTCAGTTTGTTGAACTTCCTTCTACGTGTAGTAGTTAAAAACTAAAAATTTATGTTGCCCTTTGAGAGATATCATCTAGGGCATTGTATGTACCATGGGATGAGGCCGGATGTTTATGTCCAGTTGGTGACTTGTTTAATTATGCTGCACCTGAAGGGGAGTCCCTTGATGTTATGGATGTTTCGTCTTTTTCACCACATGCTTCTTTGAATGGAGACATGACTACTGATGAGTTACATGAAGAGAAAAGAGATACTCAATGGGCTTTGACAGATGGTGGATTTGAGGAAAATGTTTCTGCCTACTGCTTCTATGCTCGGGAAAGTTATAAGAAGGGAGAGCAGGTATTTTATATTTTCTTGGTGTCATTTAATATTTTGTACTCGTGAAAAGTGGAGTTGATGCAAAATACATTAATTGGAAGTTTAACATTTTAGTTATTGAGTTTGATTTCCTATTATGAAGAGGGTTGAAATTTACATTAACCTTTTTTATTTGCTCTCTGATGCATTCTTGTTAATCTGCACCTTGAGATTTCCATAGTAAAACGAAACCAGAGATTGTTTCTTTGTGTCTTAGACTGTTATTGCACTGATGTTGAACTTTTTCTTTTTTCATCTTTTTATTTTCTGTTATTACTGTTACTTTTTCTGCCCCAAAGGTATTTTATTCTCATTATAGTTCGTAGGTTAGTTGCTTTTTTGGGTCTTATCCATCTCTCCAATTCTTTGTGTTACTAACACATCCATCAAACGTGACTCTATACCTCACCATTTTTTTTTAAAAAAAAAGCAACAGCTGAAAACGAATTAATTTGATGTTTTGGTGGGTAGCAATATTTTCAAAATGCAAGGCGCCCCCAAAGTGTCCCGTCTTTTGATTGTTTGTATATGAGTGACCTAGAAAATTAACACCTCAGTGAAGCAAAACCATACTTTATAAATTAATAAACAAATACAAAATATTTAAGACATGAATATCAATAAGTCCATTTAAAATTTCAAAAGAAAAAAAATGGTCTGTCTCTCAAACATAATTGCTTTGCATGAATCTTTCGTTCTCAAAAAAGAATGTGTGGATGAGTAACGATTGAAACCTTTCTATTTTTTACTGCAGGTTCTTTTAAGCTATGGTACATACTCAAATTTAGAGCTTCTTGAATATTATGGGTTTCTTCTACAGGAAAATCCAAATGACAAAGTTTTCATTCCTATGGAACATGACATTTATAGTTCCAGTTCTTGGCCCAAGGAGTCTCTTTATGTTCATCAAAATGGAAACCCATCTTTTGCTCTACTTTCTGCTCTACGATTATGGGCAACCCACCCGAACAAGCGCAGAGGTGTCGGGCACCTTGCTTATGCTGGGTCACAACTCTCCATCAAGAATGAAATATTAGTCATGCAGTGGTTATCCAAGAACTGCCATACTGTTCTAAACAATCTGCCAACATCAGTTGAAGAAGACAATCAGCTTCTGTGCAACATCTGCAAAATCCAGGATCTACAGGTACCAAGGGAGCTCCAGAAGATGCTGTTGACTTATGGAGGTGAATTTTGTGCTTTCTTGGAGACCAATGGTCTGGTGAATAGAAATGAAGCCGAGTTACATTTATCCGGGAAAATAAAACGATCTCTGGAGAGATGGAAGCTAGCAGTCCAGTGGAGGCTCTTGTACAAGAAGGCTTTGGTTGATTGCATAAGTTACTGCACAAGAACTATTTGTTCTCTATCTTCTTAATCTGGTTCAGGTTGTGATTAGCAGGTTCTAACTTAAGTTACCTATTAAATGAACTTTTTAGGAATCAAAAGATAAGAGAATGGTATGAATATGATAGCATTGAACCATCTAGTAAGGATGGTGTTGGGAGAAGTTGTATATGTAATATCAGTATTTCATAACTCAAAGAGAATCCCTTATCAAGCTCTTTACTCGATCTCTTTTAC

mRNA sequence

AAAAAGTTATTTGGCATTTGAAAAAAAAGGGCCAATTGATATTTTGGACCCAAATAGCAGGTCATTCGTATAAATTTCCCAAATATTTTGAACTTAAAAGCCAAATCTAAATTTGACTCAAAGCTTAAGGGATGGAAACGTATTTTTCCCTCAAGGGGCAGAGGTTTTGATGGAGGGTTTGTGAAATGGAAACTGAAGGAAGTTTTGGAAGCCTGCTGAGATGGGCGGCGGATCATGGAATTTCAGATCCTGTCGACCAACAGACTTCACATTCTTGTTTGGGTCGTTCTTTGTGCGTCTGTTTCTTCCCTGATGCCGGCGGGAGAGGTTTAGGGGCTGTTCGTCAGCTTAACAAAGGAGAGTTAGTGCTGAGAGTTCCAAAATCTGTCTTGTTAACGACCCAAAGTTTGTCGTTGGAAGATGAGAAGCTCGCCATGGCTCTGAAGAGATACCCATCTCTTTCTTCTACTCAGGTTGATTATGCTATCTGGGCAACAGAGAAGGCTGCTTTGAAATCTCGTACGGAGTGGAGAGGAGTCAAAGGACTAATGCAAGAGTCCAATATTAAAAACCAACTCCAAACATTCAAGGCATGGCTTTGGGCCTCTGCAACTTGGACTGTTTTTCTTCTGACTTGTGAAGTGGAAGTTGCTTGCACAAAGGCTTTTGGATCAGCCCAGACAAGGATACTAGGATGTTCGTTTAAGGCATTGTATGTACCATGGGATGAGGCCGGATGTTTATGTCCAGTTGGTGACTTGTTTAATTATGCTGCACCTGAAGGGGAGTCCCTTGATGTTATGGATGTTTCGTCTTTTTCACCACATGCTTCTTTGAATGGAGACATGACTACTGATGAGTTACATGAAGAGAAAAGAGATACTCAATGGGCTTTGACAGATGGTGGATTTGAGGAAAATGTTTCTGCCTACTGCTTCTATGCTCGGGAAAGTTATAAGAAGGGAGAGCAGGTTCTTTTAAGCTATGGTACATACTCAAATTTAGAGCTTCTTGAATATTATGGGTTTCTTCTACAGGAAAATCCAAATGACAAAGTTTTCATTCCTATGGAACATGACATTTATAGTTCCAGTTCTTGGCCCAAGGAGTCTCTTTATGTTCATCAAAATGGAAACCCATCTTTTGCTCTACTTTCTGCTCTACGATTATGGGCAACCCACCCGAACAAGCGCAGAGGTGTCGGGCACCTTGCTTATGCTGGGTCACAACTCTCCATCAAGAATGAAATATTAGTCATGCAGTGGTTATCCAAGAACTGCCATACTGTTCTAAACAATCTGCCAACATCAGTTGAAGAAGACAATCAGCTTCTGTGCAACATCTGCAAAATCCAGGATCTACAGGTACCAAGGGAGCTCCAGAAGATGCTGTTGACTTATGGAGGTGAATTTTGTGCTTTCTTGGAGACCAATGGTCTGGTGAATAGAAATGAAGCCGAGTTACATTTATCCGGGAAAATAAAACGATCTCTGGAGAGATGGAAGCTAGCAGTCCAGTGGAGGCTCTTGTACAAGAAGGCTTTGGTTGATTGCATAAGTTACTGCACAAGAACTATTTGTTCTCTATCTTCTTAATCTGGTTCAGGTTGTGATTAGCAGGTTCTAACTTAAGTTACCTATTAAATGAACTTTTTAGGAATCAAAAGATAAGAGAATGGTATGAATATGATAGCATTGAACCATCTAGTAAGGATGGTGTTGGGAGAAGTTGTATATGTAATATCAGTATTTCATAACTCAAAGAGAATCCCTTATCAAGCTCTTTACTCGATCTCTTTTAC

Coding sequence (CDS)

ATGGAAACTGAAGGAAGTTTTGGAAGCCTGCTGAGATGGGCGGCGGATCATGGAATTTCAGATCCTGTCGACCAACAGACTTCACATTCTTGTTTGGGTCGTTCTTTGTGCGTCTGTTTCTTCCCTGATGCCGGCGGGAGAGGTTTAGGGGCTGTTCGTCAGCTTAACAAAGGAGAGTTAGTGCTGAGAGTTCCAAAATCTGTCTTGTTAACGACCCAAAGTTTGTCGTTGGAAGATGAGAAGCTCGCCATGGCTCTGAAGAGATACCCATCTCTTTCTTCTACTCAGGTTGATTATGCTATCTGGGCAACAGAGAAGGCTGCTTTGAAATCTCGTACGGAGTGGAGAGGAGTCAAAGGACTAATGCAAGAGTCCAATATTAAAAACCAACTCCAAACATTCAAGGCATGGCTTTGGGCCTCTGCAACTTGGACTGTTTTTCTTCTGACTTGTGAAGTGGAAGTTGCTTGCACAAAGGCTTTTGGATCAGCCCAGACAAGGATACTAGGATGTTCGTTTAAGGCATTGTATGTACCATGGGATGAGGCCGGATGTTTATGTCCAGTTGGTGACTTGTTTAATTATGCTGCACCTGAAGGGGAGTCCCTTGATGTTATGGATGTTTCGTCTTTTTCACCACATGCTTCTTTGAATGGAGACATGACTACTGATGAGTTACATGAAGAGAAAAGAGATACTCAATGGGCTTTGACAGATGGTGGATTTGAGGAAAATGTTTCTGCCTACTGCTTCTATGCTCGGGAAAGTTATAAGAAGGGAGAGCAGGTTCTTTTAAGCTATGGTACATACTCAAATTTAGAGCTTCTTGAATATTATGGGTTTCTTCTACAGGAAAATCCAAATGACAAAGTTTTCATTCCTATGGAACATGACATTTATAGTTCCAGTTCTTGGCCCAAGGAGTCTCTTTATGTTCATCAAAATGGAAACCCATCTTTTGCTCTACTTTCTGCTCTACGATTATGGGCAACCCACCCGAACAAGCGCAGAGGTGTCGGGCACCTTGCTTATGCTGGGTCACAACTCTCCATCAAGAATGAAATATTAGTCATGCAGTGGTTATCCAAGAACTGCCATACTGTTCTAAACAATCTGCCAACATCAGTTGAAGAAGACAATCAGCTTCTGTGCAACATCTGCAAAATCCAGGATCTACAGGTACCAAGGGAGCTCCAGAAGATGCTGTTGACTTATGGAGGTGAATTTTGTGCTTTCTTGGAGACCAATGGTCTGGTGAATAGAAATGAAGCCGAGTTACATTTATCCGGGAAAATAAAACGATCTCTGGAGAGATGGAAGCTAGCAGTCCAGTGGAGGCTCTTGTACAAGAAGGCTTTGGTTGATTGCATAAGTTACTGCACAAGAACTATTTGTTCTCTATCTTCTTAA

Protein sequence

METEGSFGSLLRWAADHGISDPVDQQTSHSCLGRSLCVCFFPDAGGRGLGAVRQLNKGELVLRVPKSVLLTTQSLSLEDEKLAMALKRYPSLSSTQVDYAIWATEKAALKSRTEWRGVKGLMQESNIKNQLQTFKAWLWASATWTVFLLTCEVEVACTKAFGSAQTRILGCSFKALYVPWDEAGCLCPVGDLFNYAAPEGESLDVMDVSSFSPHASLNGDMTTDELHEEKRDTQWALTDGGFEENVSAYCFYARESYKKGEQVLLSYGTYSNLELLEYYGFLLQENPNDKVFIPMEHDIYSSSSWPKESLYVHQNGNPSFALLSALRLWATHPNKRRGVGHLAYAGSQLSIKNEILVMQWLSKNCHTVLNNLPTSVEEDNQLLCNICKIQDLQVPRELQKMLLTYGGEFCAFLETNGLVNRNEAELHLSGKIKRSLERWKLAVQWRLLYKKALVDCISYCTRTICSLSS

Homology

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BLAST of Lsi05G003440 vs. Swiss-Prot
Match: SDG40_ARATH (Protein SET DOMAIN GROUP 40 OS=Arabidopsis thaliana GN=SDG40 PE=2 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.2e-101
Identity = 223/489 (45.60%), Postives = 296/489 (60.53%), Query Frame = 1


Query: 9   SLLRWAADHGISDPVDQQTSH-SCLGRSLCVCFFPDAGGRGLGAVRQLNKGELVLRVPKS 68
           + LRWAA+ GISD +D      SCLG SL V  FPDAGGRGLGA R+L KGELVL+VP+ 
Sbjct: 10  TFLRWAAEIGISDSIDSSRFRDSCLGHSLSVSDFPDAGGRGLGAARELKKGELVLKVPRK 69

Query: 69  VLLTTQSLSLEDEKLAMALKRYPSLSSTQVDYAIWATEKAALKSRTEW--------RGVK 128
            L+TT+S+  +D KL+ A+  + SLSSTQ+  ++    + + + ++ W        R   
Sbjct: 70  ALMTTESIIAKDLKLSDAVNLHNSLSSTQI-LSVCLLYEMSKEKKSFWYPYLFHIPRDYD 129

Query: 129 GLMQESNIKNQLQTFKAWLWASATWTVFLLTCEVEVACTKAFGSAQTRI----------- 188
            L    N + Q    +  +WA+   T     C+ E    K  GS    +           
Sbjct: 130 LLATFGNFEKQALQVEDAVWATEKATA---KCQSE---WKEAGSLMKELELKPKFRSFQA 189

Query: 189 -----LGCSFKALYVPWDEAGCLCPVGDLFNYAAPEGESLDVMDVSSFSPHASLNGDMTT 248
                   S + L+VPWD AGCLCPVGDLFNY AP   S       S +   ++      
Sbjct: 190 WLWASATISSRTLHVPWDSAGCLCPVGDLFNYDAPGDYSNTPQGPESAN---NVEEAGLV 249

Query: 249 DELHEEKRDTQWALTDGGFEENVSAYCFYARESYKKGEQVLLSYGTYSNLELLEYYGFLL 308
            E H E+      LTDGGFEE+V+AYC YAR +Y+ GEQVLL YGTY+NLELLE+YGF+L
Sbjct: 250 VETHSER------LTDGGFEEDVNAYCLYARRNYQLGEQVLLCYGTYTNLELLEHYGFML 309

Query: 309 QENPNDKVFIPMEHDIYS-SSSWPKESLYVHQNGNPSFALLSALRLWATHPNKR-RGVGH 368
           +EN NDKVFIP+E  ++S +SSWPK+SLY+HQ+G  SFAL+S LRLW    ++R + V  
Sbjct: 310 EENSNDKVFIPLETSLFSLASSWPKDSLYIHQDGKLSFALISTLRLWLIPQSQRDKSVMR 369

Query: 369 LAYAGSQLSIKNEILVMQWLSKNCHTVLNNLPTSVEEDNQLLCNICKIQDLQVPRELQKM 428
           L YAGSQ+S+KNEILVM+W+S+ C +VL +LPTSV ED  LL NI K+QD ++  E QK 
Sbjct: 370 LVYAGSQISVKNEILVMKWMSEKCGSVLRDLPTSVTEDTVLLHNIDKLQDPELRLE-QKE 429

Query: 429 LLTYGGEFCAFLETNGLVN---RNEAELHLSGKIKRSLERWKLAVQWRLLYKKALVDCIS 468
              +G E  AFL+ N L +    +   +  S K  R L +W+ +VQWRL YK+ L DCIS
Sbjct: 430 TEAFGSEVRAFLDANCLWDVTVLSGKPIEFSRKTSRMLSKWRWSVQWRLSYKRTLADCIS 481

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BLAST of Lsi05G003440 vs. TrEMBL
Match: A0A0A0L7L4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G307670 PE=4 SV=1)

HSP 1 Score: 715.3 bits (1845), Expect = 4.8e-203
Identity = 367/508 (72.24%), Postives = 393/508 (77.36%), Query Frame = 1


Query: 1   METEGSFGSLLRWAADHGISDPVDQQTSHSCLGRSLCVCFFPDAGGRGLGAVRQLNKGEL 60
           METEGS GSLLRWAADHGISD VDQ TSHSCLG SLCV FFPD GGRGL AVRQL KGEL
Sbjct: 1   METEGSLGSLLRWAADHGISDSVDQPTSHSCLGHSLCVSFFPDTGGRGLAAVRQLKKGEL 60

Query: 61  VLRVPKSVLLTTQSLSLED--------------------EKLAMALKRYPSL-------- 120
           VLR PKS+LLTTQSLSLED                      L   + + PS         
Sbjct: 61  VLRAPKSILLTTQSLSLEDEKLDMALKRYPSLSSTQKLTFCLLYEISKGPSSWWFPYLKH 120

Query: 121 ----------------SSTQVDYAIWATEKAALKSRTEWRGVKGLMQESNIKNQLQTFKA 180
                            + QVDYAIWATEKAALKSRT+WRGV+GLMQESNIK+QLQTFKA
Sbjct: 121 LPQSYDILATFGEFEKQALQVDYAIWATEKAALKSRTDWRGVEGLMQESNIKSQLQTFKA 180

Query: 181 WLWASATWTVFLLTCEVEVACTKAFGSAQTRILGCSFKALYVPWDEAGCLCPVGDLFNYA 240
           WLWASAT                            S + LYVPWDEAGCLCPVGDLFNYA
Sbjct: 181 WLWASAT---------------------------ISSRTLYVPWDEAGCLCPVGDLFNYA 240

Query: 241 APEGESLDVMDVSSFSPHASLNGDMTTDELHEEKRDTQWALTDGGFEENVSAYCFYARES 300
           APEGES + +DV SF  HASLN ++   EL EE+RD+QWALTDGGFEEN SAYCFYARES
Sbjct: 241 APEGESFNAVDVLSFPSHASLNDEL---ELLEEQRDSQWALTDGGFEENASAYCFYARES 300

Query: 301 YKKGEQVLLSYGTYSNLELLEYYGFLLQENPNDKVFIPMEHDIYSSSSWPKESLYVHQNG 360
           Y+KGEQVLLSYGTY+NLELLEYYGFLLQENPNDKVFIP+EHDIY SSSWPKESLY+HQNG
Sbjct: 301 YRKGEQVLLSYGTYTNLELLEYYGFLLQENPNDKVFIPIEHDIYGSSSWPKESLYIHQNG 360

Query: 361 NPSFALLSALRLWATHPNKRRGVGHLAYAGSQLSIKNEILVMQWLSKNCHTVLNNLPTSV 420
           NPSFALLSALRLWATHPNKRRGVGHLAYAGSQLS+KNEILVMQWLSKNCHTVLNNLPTS+
Sbjct: 361 NPSFALLSALRLWATHPNKRRGVGHLAYAGSQLSVKNEILVMQWLSKNCHTVLNNLPTSI 420

Query: 421 EEDNQLLCNICKIQDLQVPRELQKMLLTYGGEFCAFLETNGLVNRNEAELHLSGKIKRSL 465
           EEDNQLLCNI K+QDLQVPRELQK LLTYGGEFCAFLETNG+VNR+EAE H S K+KRSL
Sbjct: 421 EEDNQLLCNIAKVQDLQVPRELQKTLLTYGGEFCAFLETNGVVNRDEAESHSSQKLKRSL 478

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BLAST of Lsi05G003440 vs. TrEMBL
Match: A0A061ELB5_THECC (Set domain group 40, putative isoform 3 OS=Theobroma cacao GN=TCM_017553 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 1.4e-133
Identity = 259/470 (55.11%), Postives = 320/470 (68.09%), Query Frame = 1


Query: 2   ETEGSFGSLLRWAADHGISDPVDQQTSHSCLGRSLCVCFFPDAGGRGLGAVRQLNKGELV 61
           E  GS  S L+WAA  G+SD  +   S SCLG SL V +FPDAGGRGLGAVR + +GEL+
Sbjct: 24  EERGSLDSFLKWAAGLGVSDSPNPD-SCSCLGHSLGVSYFPDAGGRGLGAVRDITRGELL 83

Query: 62  LRVPKSVLLTTQSLSLEDEKLAMALKRYPSLSSTQVDYAIWATEKAALKSRTEWRGVKGL 121
           L+VPKS L+TT SL L DE+L+ ALK +PSLS  QVDYAIWA +KA  K+  EW+    L
Sbjct: 84  LKVPKSALITTHSL-LNDERLSTALKAHPSLSPAQVDYAIWAAQKALSKAEYEWKKATPL 143

Query: 122 MQESNIKNQLQTFKAWLWASATWTVFLLTCEVEVACTKAFGSAQTRILGCSFKALYVPWD 181
           M+E  +K Q  TF+AW+WA+ T                            S + L++PWD
Sbjct: 144 MKELKLKLQFLTFRAWIWATGT---------------------------ISSRTLHIPWD 203

Query: 182 EAGCLCPVGDLFNYAAPEGESLDVMDVSSFSPHASLNGDMTTDELHEEKRDTQWA--LTD 241
           EAGCLCPVGDLFNYAAP GE     D++ F    +L      D+L     DTQ +  LTD
Sbjct: 204 EAGCLCPVGDLFNYAAP-GE-----DLNGFDNVDNLQNGYALDDL-----DTQHSQRLTD 263

Query: 242 GGFEENVSAYCFYARESYKKGEQVLLSYGTYSNLELLEYYGFLLQENPNDKVFIPMEHDI 301
           G FEE+ +AYCFYA+ +YKKGEQVLLSYGTY+NLELLEYYGFLL++NPN+KVFIP+E DI
Sbjct: 264 GAFEEDAAAYCFYAKTNYKKGEQVLLSYGTYTNLELLEYYGFLLEDNPNEKVFIPLEPDI 323

Query: 302 YSSSSWPKESLYVHQNGNPSFALLSALRLWATHPNKRRGVGHLAYAGSQLSIKNEILVMQ 361
           +SSSSWP +SLY+HQNG PSFAL++ALR+WAT P +R+ + H AY+GSQLS  NEI VM 
Sbjct: 324 HSSSSWPNDSLYIHQNGRPSFALMAALRVWATPPYQRKSIRHQAYSGSQLSQDNEISVMT 383

Query: 362 WLSKNCHTVLNNLPTSVEEDNQLLCNICKIQDLQVPRELQKMLLTYGGEFCAFLETNGLV 421
           W++K CH  L  +PTS+E+DN LL    KIQ+     E  K +  +GGEFC  L+   L 
Sbjct: 384 WIAKKCHATLKAMPTSIEDDNLLLSFTDKIQEFDNLWEWGKAMPAFGGEFCNLLQATNL- 443

Query: 422 NRNEAELHLSGKIKRSLERWKLAVQWRLLYKKALVDCISYCTRTICSLSS 470
            RN+ E   S + K  ++RWKLAV WRL+YKK LVDCISYCT TI SLSS
Sbjct: 444 KRND-ESFASRRAKMLIDRWKLAVHWRLIYKKVLVDCISYCTDTINSLSS 451

[Close]

BLAST of Lsi05G003440 vs. TrEMBL
Match: B9H3F8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s07950g PE=4 SV=2)

HSP 1 Score: 471.9 bits (1213), Expect = 9.3e-130
Identity = 265/504 (52.58%), Postives = 324/504 (64.29%), Query Frame = 1


Query: 7   FGSLLRWAADHGISDPVDQQTSH-----SCLGRSLCVCFFPDAGGRGLGAVRQLNKGELV 66
           F   L+WAA+ GISD     + H     SCLG SL V  FPDAGGRGL AVR L KGELV
Sbjct: 37  FERFLKWAANLGISDCTTNLSLHPQSPTSCLGHSLTVSHFPDAGGRGLAAVRDLKKGELV 96

Query: 67  LRVPKSVLLTTQSLSLEDEKLAMALKR--YPSLSSTQV---------------------- 126
           LRVPKSVL+T  SL L+DEKL   +    Y SLS TQ+                      
Sbjct: 97  LRVPKSVLITRDSL-LKDEKLCSFVNNNTYSSLSPTQILAVCLLYEMGKGKSSWWYPYLM 156

Query: 127 ----DYAIWAT-EKAALKSRTEWRGVKGLMQESNIKNQLQTFKAWLWASATWTVFLLTCE 186
                Y + A+ +KA  K+++EW+    LM    +K QL TF+AW+WASAT         
Sbjct: 157 HLPRSYDVLASFKKAVSKAKSEWKEANSLMDALKLKPQLLTFRAWIWASAT--------- 216

Query: 187 VEVACTKAFGSAQTRILGCSFKALYVPWDEAGCLCPVGDLFNYAAPEGESLDV------M 246
                              S +AL++PWDEAGCLCPVGDLFNYAAP  ES D+      M
Sbjct: 217 ------------------ISSRALHIPWDEAGCLCPVGDLFNYAAPGEESNDLENVVHLM 276

Query: 247 DVSSFSPHASLNGDMTTDELHEEKRDTQWALTDGGFEENVSAYCFYARESYKKGEQVLLS 306
           + SS    +  NG+ T D + ++       LTDGGF EN++AYCFYAR++YKKG QVLL 
Sbjct: 277 NASSLEDTSLSNGETTDDFIGDQPDIGLERLTDGGFNENMAAYCFYARKNYKKGTQVLLG 336

Query: 307 YGTYSNLELLEYYGFLLQENPNDKVFIPMEHDIYSSSSWPKESLYVHQNGNPSFALLSAL 366
           YGTY+NLELLE+YGFLL ENPNDKVFIP+E  +YS  SWPK S+Y+HQ+G PSFALLSAL
Sbjct: 337 YGTYTNLELLEHYGFLLNENPNDKVFIPLEPSMYSFISWPKVSMYIHQDGKPSFALLSAL 396

Query: 367 RLWATHPNKRRGVGHLAYAGSQLSIKNEILVMQWLSKNCHTVLNNLPTSVEEDNQLLCNI 426
           RLWAT PN+RR + HL Y+GS+LS+ NEI V++W+SKNC  +L+NLPT +EED+ LL  I
Sbjct: 397 RLWATPPNQRRSISHLVYSGSRLSVYNEISVLKWISKNCALILSNLPTVIEEDSLLLSTI 456

Query: 427 CKIQDLQVPRELQKMLLTYGGEFCAFLETNGL-VNRNEAELHLSGKIKRSLERWKLAVQW 470
            KI++   P EL   + T GGE  AFLE + L   +N +EL  SGK KR +ERWKLAVQW
Sbjct: 457 NKIENFDKPTEL---VCTSGGEARAFLEASDLQKGKNGSELMFSGKTKRVIERWKLAVQW 509

[Close]

BLAST of Lsi05G003440 vs. TrEMBL
Match: A0A067KHN9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10483 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 2.1e-121
Identity = 258/488 (52.87%), Postives = 313/488 (64.14%), Query Frame = 1


Query: 11  LRWAADHGISDP---VDQQTSHSCLGRSLCVCFFPDAGGRGLGAVRQLNKGELVLRVPKS 70
           L WAA+ GISD       +  +SC G SL +  FPDAGGRGLGA R L KGELVLRVPK 
Sbjct: 14  LEWAAELGISDSPYNFQSRNPNSCFGNSLTLSHFPDAGGRGLGAARDLWKGELVLRVPKP 73

Query: 71  VLLTTQSLSLEDEKLAMALKRYPSLSSTQVDYAIWATEKAALKSRTEWRGVKGLMQESNI 130
            LLT  SL L+D  L+  +  +PSLS TQ+       E    KS + W     LM     
Sbjct: 74  ALLTRDSL-LKDGLLSSFVNGHPSLSPTQILTVCLLYEMGKGKS-SFW--YPYLMHLPRS 133

Query: 131 KNQLQTF-----KAWLWASATWTVFLLTCEVEVACTKAFGSAQTRILGCSF--------- 190
              L TF     +A+    A WT      + E    +A    Q   L   F         
Sbjct: 134 YETLATFSEFEKQAFQVDDAVWTTEKAISKAESEWKEANLLMQELKLKPRFLTLRAWIWA 193

Query: 191 ------KALYVPWDEAGCLCPVGDLFNYAAPEGESLDVMDVSS----FSPHASLNGDMTT 250
                 + L++PWDEAGCLCPVGDLFNYAAP  ES  +    S     SP  SL+    T
Sbjct: 194 SATISSRTLHIPWDEAGCLCPVGDLFNYAAPGEESTGLESAESCMLNSSPQGSLSCGHPT 253

Query: 251 DELHEEKRDTQ-WALTDGGFEENVSAYCFYARESYKKGEQVLLSYGTYSNLELLEYYGFL 310
           D L+E + D     LTDGGF+E++ AYCFYAR++YKKGEQVLLSYGTY+NLELLE+YGF+
Sbjct: 254 DYLYEGRFDAHLQRLTDGGFDEDLDAYCFYARKNYKKGEQVLLSYGTYTNLELLEHYGFV 313

Query: 311 LQENPNDKVFIPMEHDIYSSSSWPKESLYVHQNGNPSFALLSALRLWATHPNKRRGVGHL 370
           L ENPNDKVFIP+E  +YSS+SWPKES+Y+HQ+G PSFALLSALRLWAT PN+RR VGHL
Sbjct: 314 LDENPNDKVFIPLEPSMYSSNSWPKESMYIHQDGKPSFALLSALRLWATPPNQRRSVGHL 373

Query: 371 AYAGSQLSIKNEILVMQWLSKNCHTVLNNLPTSVEEDNQLLCNICKIQDLQVPRELQKML 430
           AY+GSQLS++NE  V++W+SK+CH +LNNLPT VEED+ LL  I KIQ+L  P EL +ML
Sbjct: 374 AYSGSQLSVENETWVLKWISKSCHEILNNLPTKVEEDHLLLSTIDKIQNLYNPMELGQML 433

Query: 431 LTYGGEFCAFLETNGL-VNRNEAELHLSGKIKRSLERWKLAVQWRLLYKKALVDCISYCT 470
             + GEF  FLE + +   +N  EL LS K K+++ERWKLAVQWR  YKK +VDCIS CT
Sbjct: 434 CQFKGEFRDFLEASSIGKGKNGDELMLSSKTKQAIERWKLAVQWRFRYKKIVVDCISSCT 493

[Close]

BLAST of Lsi05G003440 vs. TrEMBL
Match: V4SX96_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011537mg PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 6.3e-118
Identity = 250/490 (51.02%), Postives = 310/490 (63.27%), Query Frame = 1


Query: 2   ETEGSFGSLLRWAADHGISDPVDQQTSHS--CLGRSLCVCFFPDAGGRGLGAVRQLNKGE 61
           E + S   LL+WAA+ GI+D   Q  S S  CLG SL V  FP+AGGRGL A R L KGE
Sbjct: 3   EEDESLEKLLKWAAEMGITDSTIQNPSRSRNCLGHSLTVSHFPEAGGRGLAAARDLTKGE 62

Query: 62  LVLRVPKSVLLTTQSLSLEDEKLAMALKRYPSLSSTQVDYAIWATEKAALKSRTEWRGVK 121
           L+LRVPK+ L TT+ L   D+K ++A+ R+  LS +Q+       E    KS   +  + 
Sbjct: 63  LILRVPKTALFTTECLLKSDQKRSLAVNRHLFLSPSQILIVCLLYEVGKGKSSRWYTYLM 122

Query: 122 GLMQESNI--------KNQLQTFKA-WL-----------WASATWTVFLLTCEVEVACTK 181
            L +   I        K  LQ   A W            W  A   +  L  + ++   K
Sbjct: 123 LLPRCYEILATFGPFEKQALQVDDAIWAAEKAVSKAESEWKQAIKLMEELKLKPQLLSFK 182

Query: 182 AFGSAQTRILGCSFKALYVPWDEAGCLCPVGDLFNYAAP-EGE--SLDVMDVSSFSPHAS 241
           A+  A   +   S + +++ WDEAGCLCPVGDLFNYAAP EGE  ++ + DV  + P   
Sbjct: 183 AWLWASATV---SSRTMHISWDEAGCLCPVGDLFNYAAPGEGEESNIGIEDVEGWMPAPC 242

Query: 242 LNGDMTTDELHEEKRDTQW-ALTDGGFEENVSAYCFYARESYKKGEQVLLSYGTYSNLEL 301
           L    TTD L  EK +     LTDG FEE+V++YCFYAR +YK+GEQVLLSYGTY+NLEL
Sbjct: 243 LPKGDTTDVLDSEKFNGHLRRLTDGRFEEDVNSYCFYARNNYKRGEQVLLSYGTYTNLEL 302

Query: 302 LEYYGFLLQENPNDKVFIPMEHDIYSSSSWPKESLYVHQNGNPSFALLSALRLWATHPNK 361
           LE+YGFLL ENPNDKVFI +E  +YS  SWP+ES Y+ QNG PSFALLSALRLW T  N+
Sbjct: 303 LEHYGFLLNENPNDKVFISLEPGMYSCCSWPRESQYIDQNGKPSFALLSALRLWMTPANQ 362

Query: 362 RRGVGHLAYAGSQLSIKNEILVMQWLSKNCHTVLNNLPTSVEEDNQLLCNICKIQDLQVP 421
           RR VGHLAY+G QLS+ NEI VM+WLS N   +LN+LPTS EED  LLC I KIQD+   
Sbjct: 363 RRSVGHLAYSGHQLSVDNEISVMKWLSNNSRVMLNSLPTSKEEDALLLCAIDKIQDIYTA 422

Query: 422 RELQKMLLTYGGEFCAFLETNGLVNRNE-AELHLSGKIKRSLERWKLAVQWRLLYKKALV 465
            EL+K+L  +GGE C FLE  G+  R   A+L LS K K S++RWKLA+QWRL YKK L 
Sbjct: 423 MELKKVLSDFGGEVCTFLENYGVQCRQRGAKLSLSRKTKLSMQRWKLAIQWRLRYKKTLA 482

[Close]

BLAST of Lsi05G003440 vs. TAIR10
Match: AT5G17240.1 (AT5G17240.1 SET domain group 40)

HSP 1 Score: 371.7 bits (953), Expect = 6.7e-103
Identity = 223/489 (45.60%), Postives = 296/489 (60.53%), Query Frame = 1


Query: 9   SLLRWAADHGISDPVDQQTSH-SCLGRSLCVCFFPDAGGRGLGAVRQLNKGELVLRVPKS 68
           + LRWAA+ GISD +D      SCLG SL V  FPDAGGRGLGA R+L KGELVL+VP+ 
Sbjct: 10  TFLRWAAEIGISDSIDSSRFRDSCLGHSLSVSDFPDAGGRGLGAARELKKGELVLKVPRK 69

Query: 69  VLLTTQSLSLEDEKLAMALKRYPSLSSTQVDYAIWATEKAALKSRTEW--------RGVK 128
            L+TT+S+  +D KL+ A+  + SLSSTQ+  ++    + + + ++ W        R   
Sbjct: 70  ALMTTESIIAKDLKLSDAVNLHNSLSSTQI-LSVCLLYEMSKEKKSFWYPYLFHIPRDYD 129

Query: 129 GLMQESNIKNQLQTFKAWLWASATWTVFLLTCEVEVACTKAFGSAQTRI----------- 188
            L    N + Q    +  +WA+   T     C+ E    K  GS    +           
Sbjct: 130 LLATFGNFEKQALQVEDAVWATEKATA---KCQSE---WKEAGSLMKELELKPKFRSFQA 189

Query: 189 -----LGCSFKALYVPWDEAGCLCPVGDLFNYAAPEGESLDVMDVSSFSPHASLNGDMTT 248
                   S + L+VPWD AGCLCPVGDLFNY AP   S       S +   ++      
Sbjct: 190 WLWASATISSRTLHVPWDSAGCLCPVGDLFNYDAPGDYSNTPQGPESAN---NVEEAGLV 249

Query: 249 DELHEEKRDTQWALTDGGFEENVSAYCFYARESYKKGEQVLLSYGTYSNLELLEYYGFLL 308
            E H E+      LTDGGFEE+V+AYC YAR +Y+ GEQVLL YGTY+NLELLE+YGF+L
Sbjct: 250 VETHSER------LTDGGFEEDVNAYCLYARRNYQLGEQVLLCYGTYTNLELLEHYGFML 309

Query: 309 QENPNDKVFIPMEHDIYS-SSSWPKESLYVHQNGNPSFALLSALRLWATHPNKR-RGVGH 368
           +EN NDKVFIP+E  ++S +SSWPK+SLY+HQ+G  SFAL+S LRLW    ++R + V  
Sbjct: 310 EENSNDKVFIPLETSLFSLASSWPKDSLYIHQDGKLSFALISTLRLWLIPQSQRDKSVMR 369

Query: 369 LAYAGSQLSIKNEILVMQWLSKNCHTVLNNLPTSVEEDNQLLCNICKIQDLQVPRELQKM 428
           L YAGSQ+S+KNEILVM+W+S+ C +VL +LPTSV ED  LL NI K+QD ++  E QK 
Sbjct: 370 LVYAGSQISVKNEILVMKWMSEKCGSVLRDLPTSVTEDTVLLHNIDKLQDPELRLE-QKE 429

Query: 429 LLTYGGEFCAFLETNGLVN---RNEAELHLSGKIKRSLERWKLAVQWRLLYKKALVDCIS 468
              +G E  AFL+ N L +    +   +  S K  R L +W+ +VQWRL YK+ L DCIS
Sbjct: 430 TEAFGSEVRAFLDANCLWDVTVLSGKPIEFSRKTSRMLSKWRWSVQWRLSYKRTLADCIS 481

[Close]

BLAST of Lsi05G003440 vs. NCBI nr
Match: gi|659114393|ref|XP_008457032.1| (PREDICTED: protein SET DOMAIN GROUP 40 isoform X4 [Cucumis melo])

HSP 1 Score: 781.2 bits (2016), Expect = 1.0e-222
Identity = 387/469 (82.52%), Postives = 410/469 (87.42%), Query Frame = 1


Query: 1   METEGSFGSLLRWAADHGISDPVDQQTSHSCLGRSLCVCFFPDAGGRGLGAVRQLNKGEL 60
           METEGSFGSLLRWAADHGISD +DQ TS SCLGRSLCV FFPD+GGRGL AVRQLNKGEL
Sbjct: 1   METEGSFGSLLRWAADHGISDSIDQHTSRSCLGRSLCVSFFPDSGGRGLAAVRQLNKGEL 60

Query: 61  VLRVPKSVLLTTQSLSLEDEKLAMALKRYPSLSSTQVDYAIWATEKAALKSRTEWRGVKG 120
           +LR PKSVLLTTQSLSLEDEKLAMALK +PSLSSTQVDYAIWATEKAALKSR +WRGVKG
Sbjct: 61  ILRAPKSVLLTTQSLSLEDEKLAMALKIFPSLSSTQVDYAIWATEKAALKSRMDWRGVKG 120

Query: 121 LMQESNIKNQLQTFKAWLWASATWTVFLLTCEVEVACTKAFGSAQTRILGCSFKALYVPW 180
           LMQESNIKNQLQTFKAWLWASAT                            S + LYVPW
Sbjct: 121 LMQESNIKNQLQTFKAWLWASAT---------------------------ISSRTLYVPW 180

Query: 181 DEAGCLCPVGDLFNYAAPEGESLDVMDVSSFSPHASLNGDMTTDELHEEKRDTQWALTDG 240
           DEAGCLCPVGDLFNYAAPEGES + MDV SF  HASLN ++   E  EE+RD+QW LTDG
Sbjct: 181 DEAGCLCPVGDLFNYAAPEGESFNAMDVLSFPSHASLNDEL---ESLEEQRDSQWDLTDG 240

Query: 241 GFEENVSAYCFYARESYKKGEQVLLSYGTYSNLELLEYYGFLLQENPNDKVFIPMEHDIY 300
           GFEEN SAYCFYARESYKKGEQVLLSYGTY+N+ELLEYYGFLLQENPNDKVFIP+EHDIY
Sbjct: 241 GFEENASAYCFYARESYKKGEQVLLSYGTYTNIELLEYYGFLLQENPNDKVFIPIEHDIY 300

Query: 301 SSSSWPKESLYVHQNGNPSFALLSALRLWATHPNKRRGVGHLAYAGSQLSIKNEILVMQW 360
            SSSWPKESLY+HQNGNPSFALLSALRLWATHPNKRRGVGHLAYAGSQLS+KNE LVMQW
Sbjct: 301 VSSSWPKESLYIHQNGNPSFALLSALRLWATHPNKRRGVGHLAYAGSQLSVKNETLVMQW 360

Query: 361 LSKNCHTVLNNLPTSVEEDNQLLCNICKIQDLQVPRELQKMLLTYGGEFCAFLETNGLVN 420
           LSKNCHTVLNNLPTS+EED+QLLCNI K+QDLQV REL+KMLLTYGGE CAFLETNG+VN
Sbjct: 361 LSKNCHTVLNNLPTSIEEDDQLLCNIAKVQDLQVQRELRKMLLTYGGECCAFLETNGVVN 420

Query: 421 RNEAELHLSGKIKRSLERWKLAVQWRLLYKKALVDCISYCTRTICSLSS 470
           R+EAE HLS K+KRSLERWKLAVQWRLLYKKALVDCI YCTRTICSLSS
Sbjct: 421 RDEAESHLSEKLKRSLERWKLAVQWRLLYKKALVDCIGYCTRTICSLSS 439

[Close]

BLAST of Lsi05G003440 vs. NCBI nr
Match: gi|659114361|ref|XP_008457031.1| (PREDICTED: protein SET DOMAIN GROUP 40 isoform X3 [Cucumis melo])

HSP 1 Score: 775.0 bits (2000), Expect = 7.4e-221
Identity = 387/474 (81.65%), Postives = 410/474 (86.50%), Query Frame = 1


Query: 1   METEGSFGSLLRWAADHGISDPVDQQTSHSCLGRSLCVCFFPDAGG-----RGLGAVRQL 60
           METEGSFGSLLRWAADHGISD +DQ TS SCLGRSLCV FFPD+GG     RGL AVRQL
Sbjct: 1   METEGSFGSLLRWAADHGISDSIDQHTSRSCLGRSLCVSFFPDSGGKLCFRRGLAAVRQL 60

Query: 61  NKGELVLRVPKSVLLTTQSLSLEDEKLAMALKRYPSLSSTQVDYAIWATEKAALKSRTEW 120
           NKGEL+LR PKSVLLTTQSLSLEDEKLAMALK +PSLSSTQVDYAIWATEKAALKSR +W
Sbjct: 61  NKGELILRAPKSVLLTTQSLSLEDEKLAMALKIFPSLSSTQVDYAIWATEKAALKSRMDW 120

Query: 121 RGVKGLMQESNIKNQLQTFKAWLWASATWTVFLLTCEVEVACTKAFGSAQTRILGCSFKA 180
           RGVKGLMQESNIKNQLQTFKAWLWASAT                            S + 
Sbjct: 121 RGVKGLMQESNIKNQLQTFKAWLWASAT---------------------------ISSRT 180

Query: 181 LYVPWDEAGCLCPVGDLFNYAAPEGESLDVMDVSSFSPHASLNGDMTTDELHEEKRDTQW 240
           LYVPWDEAGCLCPVGDLFNYAAPEGES + MDV SF  HASLN ++   E  EE+RD+QW
Sbjct: 181 LYVPWDEAGCLCPVGDLFNYAAPEGESFNAMDVLSFPSHASLNDEL---ESLEEQRDSQW 240

Query: 241 ALTDGGFEENVSAYCFYARESYKKGEQVLLSYGTYSNLELLEYYGFLLQENPNDKVFIPM 300
            LTDGGFEEN SAYCFYARESYKKGEQVLLSYGTY+N+ELLEYYGFLLQENPNDKVFIP+
Sbjct: 241 DLTDGGFEENASAYCFYARESYKKGEQVLLSYGTYTNIELLEYYGFLLQENPNDKVFIPI 300

Query: 301 EHDIYSSSSWPKESLYVHQNGNPSFALLSALRLWATHPNKRRGVGHLAYAGSQLSIKNEI 360
           EHDIY SSSWPKESLY+HQNGNPSFALLSALRLWATHPNKRRGVGHLAYAGSQLS+KNE 
Sbjct: 301 EHDIYVSSSWPKESLYIHQNGNPSFALLSALRLWATHPNKRRGVGHLAYAGSQLSVKNET 360

Query: 361 LVMQWLSKNCHTVLNNLPTSVEEDNQLLCNICKIQDLQVPRELQKMLLTYGGEFCAFLET 420
           LVMQWLSKNCHTVLNNLPTS+EED+QLLCNI K+QDLQV REL+KMLLTYGGE CAFLET
Sbjct: 361 LVMQWLSKNCHTVLNNLPTSIEEDDQLLCNIAKVQDLQVQRELRKMLLTYGGECCAFLET 420

Query: 421 NGLVNRNEAELHLSGKIKRSLERWKLAVQWRLLYKKALVDCISYCTRTICSLSS 470
           NG+VNR+EAE HLS K+KRSLERWKLAVQWRLLYKKALVDCI YCTRTICSLSS
Sbjct: 421 NGVVNRDEAESHLSEKLKRSLERWKLAVQWRLLYKKALVDCIGYCTRTICSLSS 444

[Close]

BLAST of Lsi05G003440 vs. NCBI nr
Match: gi|449456212|ref|XP_004145844.1| (PREDICTED: protein SET DOMAIN GROUP 40 [Cucumis sativus])

HSP 1 Score: 734.9 bits (1896), Expect = 8.5e-209
Identity = 376/513 (73.29%), Postives = 401/513 (78.17%), Query Frame = 1


Query: 1   METEGSFGSLLRWAADHGISDPVDQQTSHSCLGRSLCVCFFPDAGGRGLGAVRQLNKGEL 60
           METEGS GSLLRWAADHGISD VDQ TSHSCLG SLCV FFPD GGRGL AVRQL KGEL
Sbjct: 1   METEGSLGSLLRWAADHGISDSVDQPTSHSCLGHSLCVSFFPDTGGRGLAAVRQLKKGEL 60

Query: 61  VLRVPKSVLLTTQSLSLED--------------------EKLAMALKRYPSL-------- 120
           VLR PKS+LLTTQSLSLED                      L   + + PS         
Sbjct: 61  VLRAPKSILLTTQSLSLEDEKLDMALKRYPSLSSTQKLTFCLLYEISKGPSSWWFPYLKH 120

Query: 121 ----------------SSTQVDYAIWATEKAALKSRTEWRGVKGLMQESNIKNQLQTFKA 180
                            + QVDYAIWATEKAALKSRT+WRGV+GLMQESNIK+QLQTFKA
Sbjct: 121 LPQSYDILATFGEFEKQALQVDYAIWATEKAALKSRTDWRGVEGLMQESNIKSQLQTFKA 180

Query: 181 WLWASATWTVFLLTCEVEVACTKAFGSAQTRILGCSFKALYVPWDEAGCLCPVGDLFNYA 240
           WLWASAT                            S + LYVPWDEAGCLCPVGDLFNYA
Sbjct: 181 WLWASAT---------------------------ISSRTLYVPWDEAGCLCPVGDLFNYA 240

Query: 241 APEGESLDVMDVSSFSPHASLNGDMTTDELHEEKRDTQWALTDGGFEENVSAYCFYARES 300
           APEGES + +DV SF  HASLN ++   EL EE+RD+QWALTDGGFEEN SAYCFYARES
Sbjct: 241 APEGESFNAVDVLSFPSHASLNDEL---ELLEEQRDSQWALTDGGFEENASAYCFYARES 300

Query: 301 YKKGEQVLLSYGTYSNLELLEYYGFLLQENPNDKVFIPMEHDIYSSSSWPKESLYVHQNG 360
           Y+KGEQVLLSYGTY+NLELLEYYGFLLQENPNDKVFIP+EHDIY SSSWPKESLY+HQNG
Sbjct: 301 YRKGEQVLLSYGTYTNLELLEYYGFLLQENPNDKVFIPIEHDIYGSSSWPKESLYIHQNG 360

Query: 361 NPSFALLSALRLWATHPNKRRGVGHLAYAGSQLSIKNEILVMQWLSKNCHTVLNNLPTSV 420
           NPSFALLSALRLWATHPNKRRGVGHLAYAGSQLS+KNEILVMQWLSKNCHTVLNNLPTS+
Sbjct: 361 NPSFALLSALRLWATHPNKRRGVGHLAYAGSQLSVKNEILVMQWLSKNCHTVLNNLPTSI 420

Query: 421 EEDNQLLCNICKIQDLQVPRELQKMLLTYGGEFCAFLETNGLVNRNEAELHLSGKIKRSL 470
           EEDNQLLCNI K+QDLQVPRELQK LLTYGGEFCAFLETNG+VNR+EAE H S K+KRSL
Sbjct: 421 EEDNQLLCNIAKVQDLQVPRELQKTLLTYGGEFCAFLETNGVVNRDEAESHSSQKLKRSL 480

[Close]

BLAST of Lsi05G003440 vs. NCBI nr
Match: gi|659114359|ref|XP_008457030.1| (PREDICTED: protein SET DOMAIN GROUP 40 isoform X2 [Cucumis melo])

HSP 1 Score: 733.8 bits (1893), Expect = 1.9e-208
Identity = 378/513 (73.68%), Postives = 402/513 (78.36%), Query Frame = 1


Query: 1   METEGSFGSLLRWAADHGISDPVDQQTSHSCLGRSLCVCFFPDAGGRGLGAVRQLNKGEL 60
           METEGSFGSLLRWAADHGISD +DQ TS SCLGRSLCV FFPD+GGRGL AVRQLNKGEL
Sbjct: 1   METEGSFGSLLRWAADHGISDSIDQHTSRSCLGRSLCVSFFPDSGGRGLAAVRQLNKGEL 60

Query: 61  VLRVPKSVLLTTQSLSLED---------------------------EKLAMA-----LKR 120
           +LR PKSVLLTTQSLSLED                            K A +     LK 
Sbjct: 61  ILRAPKSVLLTTQSLSLEDEKLAMALKIFPSLSSTQKLTFCLLNEISKGASSRWFPYLKH 120

Query: 121 YPSL------------SSTQVDYAIWATEKAALKSRTEWRGVKGLMQESNIKNQLQTFKA 180
            P               + QVDYAIWATEKAALKSR +WRGVKGLMQESNIKNQLQTFKA
Sbjct: 121 LPQSYDILATFGEFEKQALQVDYAIWATEKAALKSRMDWRGVKGLMQESNIKNQLQTFKA 180

Query: 181 WLWASATWTVFLLTCEVEVACTKAFGSAQTRILGCSFKALYVPWDEAGCLCPVGDLFNYA 240
           WLWASAT                            S + LYVPWDEAGCLCPVGDLFNYA
Sbjct: 181 WLWASAT---------------------------ISSRTLYVPWDEAGCLCPVGDLFNYA 240

Query: 241 APEGESLDVMDVSSFSPHASLNGDMTTDELHEEKRDTQWALTDGGFEENVSAYCFYARES 300
           APEGES + MDV SF  HASLN ++   E  EE+RD+QW LTDGGFEEN SAYCFYARES
Sbjct: 241 APEGESFNAMDVLSFPSHASLNDEL---ESLEEQRDSQWDLTDGGFEENASAYCFYARES 300

Query: 301 YKKGEQVLLSYGTYSNLELLEYYGFLLQENPNDKVFIPMEHDIYSSSSWPKESLYVHQNG 360
           YKKGEQVLLSYGTY+N+ELLEYYGFLLQENPNDKVFIP+EHDIY SSSWPKESLY+HQNG
Sbjct: 301 YKKGEQVLLSYGTYTNIELLEYYGFLLQENPNDKVFIPIEHDIYVSSSWPKESLYIHQNG 360

Query: 361 NPSFALLSALRLWATHPNKRRGVGHLAYAGSQLSIKNEILVMQWLSKNCHTVLNNLPTSV 420
           NPSFALLSALRLWATHPNKRRGVGHLAYAGSQLS+KNE LVMQWLSKNCHTVLNNLPTS+
Sbjct: 361 NPSFALLSALRLWATHPNKRRGVGHLAYAGSQLSVKNETLVMQWLSKNCHTVLNNLPTSI 420

Query: 421 EEDNQLLCNICKIQDLQVPRELQKMLLTYGGEFCAFLETNGLVNRNEAELHLSGKIKRSL 470
           EED+QLLCNI K+QDLQV REL+KMLLTYGGE CAFLETNG+VNR+EAE HLS K+KRSL
Sbjct: 421 EEDDQLLCNIAKVQDLQVQRELRKMLLTYGGECCAFLETNGVVNRDEAESHLSEKLKRSL 480

[Close]

BLAST of Lsi05G003440 vs. NCBI nr
Match: gi|659114357|ref|XP_008457029.1| (PREDICTED: protein SET DOMAIN GROUP 40 isoform X1 [Cucumis melo])

HSP 1 Score: 727.6 bits (1877), Expect = 1.4e-206
Identity = 378/518 (72.97%), Postives = 402/518 (77.61%), Query Frame = 1


Query: 1   METEGSFGSLLRWAADHGISDPVDQQTSHSCLGRSLCVCFFPDAGG-----RGLGAVRQL 60
           METEGSFGSLLRWAADHGISD +DQ TS SCLGRSLCV FFPD+GG     RGL AVRQL
Sbjct: 1   METEGSFGSLLRWAADHGISDSIDQHTSRSCLGRSLCVSFFPDSGGKLCFRRGLAAVRQL 60

Query: 61  NKGELVLRVPKSVLLTTQSLSLED---------------------------EKLAMA--- 120
           NKGEL+LR PKSVLLTTQSLSLED                            K A +   
Sbjct: 61  NKGELILRAPKSVLLTTQSLSLEDEKLAMALKIFPSLSSTQKLTFCLLNEISKGASSRWF 120

Query: 121 --LKRYPSL------------SSTQVDYAIWATEKAALKSRTEWRGVKGLMQESNIKNQL 180
             LK  P               + QVDYAIWATEKAALKSR +WRGVKGLMQESNIKNQL
Sbjct: 121 PYLKHLPQSYDILATFGEFEKQALQVDYAIWATEKAALKSRMDWRGVKGLMQESNIKNQL 180

Query: 181 QTFKAWLWASATWTVFLLTCEVEVACTKAFGSAQTRILGCSFKALYVPWDEAGCLCPVGD 240
           QTFKAWLWASAT                            S + LYVPWDEAGCLCPVGD
Sbjct: 181 QTFKAWLWASAT---------------------------ISSRTLYVPWDEAGCLCPVGD 240

Query: 241 LFNYAAPEGESLDVMDVSSFSPHASLNGDMTTDELHEEKRDTQWALTDGGFEENVSAYCF 300
           LFNYAAPEGES + MDV SF  HASLN ++   E  EE+RD+QW LTDGGFEEN SAYCF
Sbjct: 241 LFNYAAPEGESFNAMDVLSFPSHASLNDEL---ESLEEQRDSQWDLTDGGFEENASAYCF 300

Query: 301 YARESYKKGEQVLLSYGTYSNLELLEYYGFLLQENPNDKVFIPMEHDIYSSSSWPKESLY 360
           YARESYKKGEQVLLSYGTY+N+ELLEYYGFLLQENPNDKVFIP+EHDIY SSSWPKESLY
Sbjct: 301 YARESYKKGEQVLLSYGTYTNIELLEYYGFLLQENPNDKVFIPIEHDIYVSSSWPKESLY 360

Query: 361 VHQNGNPSFALLSALRLWATHPNKRRGVGHLAYAGSQLSIKNEILVMQWLSKNCHTVLNN 420
           +HQNGNPSFALLSALRLWATHPNKRRGVGHLAYAGSQLS+KNE LVMQWLSKNCHTVLNN
Sbjct: 361 IHQNGNPSFALLSALRLWATHPNKRRGVGHLAYAGSQLSVKNETLVMQWLSKNCHTVLNN 420

Query: 421 LPTSVEEDNQLLCNICKIQDLQVPRELQKMLLTYGGEFCAFLETNGLVNRNEAELHLSGK 470
           LPTS+EED+QLLCNI K+QDLQV REL+KMLLTYGGE CAFLETNG+VNR+EAE HLS K
Sbjct: 421 LPTSIEEDDQLLCNIAKVQDLQVQRELRKMLLTYGGECCAFLETNGVVNRDEAESHLSEK 480

The following BLAST results are available for this feature:

BLAST of Lsi05G003440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SDG40_ARATH	1.2e-101	45.60	Protein SET DOMAIN GROUP 40 OS=Arabidopsis thaliana GN=SDG40 PE=2 SV=1	[more]

BLAST of Lsi05G003440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7L4_CUCSA	4.8e-203	72.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G307670 PE=4 SV=1	[more]
A0A061ELB5_THECC	1.4e-133	55.11	Set domain group 40, putative isoform 3 OS=Theobroma cacao GN=TCM_017553 PE=4 SV...	[more]
B9H3F8_POPTR	9.3e-130	52.58	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s07950g PE=4 SV=2	[more]
A0A067KHN9_JATCU	2.1e-121	52.87	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10483 PE=4 SV=1	[more]
V4SX96_9ROSI	6.3e-118	51.02	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011537mg PE=4 SV=1	[more]

BLAST of Lsi05G003440 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17240.1	6.7e-103	45.60	SET domain group 40	[more]

BLAST of Lsi05G003440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114393\|ref\|XP_008457032.1\|	1.0e-222	82.52	PREDICTED: protein SET DOMAIN GROUP 40 isoform X4 [Cucumis melo]	[more]
gi\|659114361\|ref\|XP_008457031.1\|	7.4e-221	81.65	PREDICTED: protein SET DOMAIN GROUP 40 isoform X3 [Cucumis melo]	[more]
gi\|449456212\|ref\|XP_004145844.1\|	8.5e-209	73.29	PREDICTED: protein SET DOMAIN GROUP 40 [Cucumis sativus]	[more]
gi\|659114359\|ref\|XP_008457030.1\|	1.9e-208	73.68	PREDICTED: protein SET DOMAIN GROUP 40 isoform X2 [Cucumis melo]	[more]
gi\|659114357\|ref\|XP_008457029.1\|	1.4e-206	72.97	PREDICTED: protein SET DOMAIN GROUP 40 isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR015353	Rubisco_LSMT_subst-bd
IPR001214	SET_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G003440.1	Lsi05G003440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001214	SET domain	PFAM	PF00856	SET	coord: 46..268 score: 9.
IPR001214	SET domain	PROFILE	PS50280	SET	coord: 34..268 score: 10
IPR015353	Rubisco LSMT, substrate-binding domain	GENE3D	G3DSA:3.90.1420.10		coord: 308..393 score: 4.1E-11coord: 437..463 score: 4.1
IPR015353	Rubisco LSMT, substrate-binding domain	PFAM	PF09273	Rubis-subs-bind	coord: 319..384 score: 2.
IPR015353	Rubisco LSMT, substrate-binding domain	unknown	SSF81822	RuBisCo LSMT C-terminal, substrate-binding domain	coord: 278..391 score: 3.0
None	No IPR available	GENE3D	G3DSA:3.90.1410.10		coord: 9..113 score: 1.7E-6coord: 114..281 score: 8.2
None	No IPR available	PANTHER	PTHR13271	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	coord: 435..469 score: 1.1E-141coord: 244..388 score: 1.1E-141coord: 2..215 score: 1.1E
None	No IPR available	PANTHER	PTHR13271:SF19	PROTEIN SET DOMAIN GROUP 40	coord: 435..469 score: 1.1E-141coord: 244..388 score: 1.1E-141coord: 2..215 score: 1.1E
None	No IPR available	unknown	SSF82199	SET domain	coord: 8..149 score: 5.76E-21coord: 177..286 score: 5.76

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G003440	Csa3G307670	Cucumber (Chinese Long) v2	culsiB212
Lsi05G003440	CSPI03G21300	Wild cucumber (PI 183967)	cpilsiB210
Lsi05G003440	Cucsa.375270	Cucumber (Gy14) v1	cgylsiB607
Lsi05G003440	CmaCh14G008320	Cucurbita maxima (Rimu)	cmalsiB249
Lsi05G003440	CmoCh14G008470	Cucurbita moschata (Rifu)	cmolsiB237
Lsi05G003440	Cla013207	Watermelon (97103) v1	lsiwmB361
Lsi05G003440	MELO3C020240	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G003440	ClCG05G011370	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G003440	MELO3C020240.2	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G003440	Cla97C05G093460	Watermelon (97103) v2	lsiwmbB329
Lsi05G003440	Bhi01G001500	Wax gourd	lsiwgoB447
Lsi05G003440	Cp4.1LG03g06050	Cucurbita pepo (Zucchini)	cpelsiB511
Lsi05G003440	CsGy3G020670	Cucumber (Gy14) v2	cgyblsiB199
Lsi05G003440	Carg26927	Silver-seed gourd	carlsiB464
Lsi05G003440	CsaV3_3G021090	Cucumber (Chinese Long) v3	cuclsiB231

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G003440	Cucumber (Gy14) v2	cgyblsiB192
Lsi05G003440	Silver-seed gourd	carlsiB700
Lsi05G003440	Cucurbita maxima (Rimu)	cmalsiB440
Lsi05G003440	Cucurbita moschata (Rifu)	cmolsiB430
Lsi05G003440	Cucurbita pepo (Zucchini)	cpelsiB470