Lsi05G003310 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATATTTATGGAGGCAAAAATTCTAATGCGAATAAACAAAATATCATACCCTAATAAATACTAGAAATTTTGATTATACTGACGATTCGAGATTTCTTGTTCCTGTTCGTGTTCGGAGGGCAGTTCATCTTCTTTGTCTTTCATGTCTCCAGTCCACCAATTGATTTAATTACTCGACGCAACGTTATCTTCATCAAGTGCAATTCCATATTCAGTTTCTTACTCTTTGAAACCGACGGTGACCGACCATGGATGGCGGAGAAGCAATTTGGGAAGAGATCGAGCGCTCTGAGAGGTATCATATCTAAATTTCCTGTTTTTTTCTTCTTTTTTCCAACAAAAACGTGGTCACATATCAGTTTGATTCATTCCTTATGTACGGAGTTGGAAACGTGATTCGTCAATGGGTTTTGCAGCTATCTTGTGTGCTCCATGTACGAGGAAGCATTAGGGCTAGCTTCCTCCGTTTTAAAGCGTATTTCTCAAGAGAAAAATGGCTGTGATAATGATATGATGGAATCAGCTGGTATGGTTTTAGTTCAATCTTTGAAGGAACTTGGAAGGTAGTGTTTATTATAACTACTTTCGTATTTTTAACCTTATGTTATGACCTATCACATATGCTAGTTTAGATTTCTACAATAACCAAATGACCCCTGAGTTTTGAAGGGCTGCGTATTGAATCAAACTCTAAAGTGATAATTATCAACTGTAATGTTTATTGTGATGGTAATCTTGATTAATGCAATGTTAATTTTGTTTGTCGATTTTTTAAGATATAATTTGCAGGACGTCGTTTCCTAATAGGTGGTGTATAATATGGACAACTTTCAAATTGTCTTCTCGTTACCTTCTAAGTTATTAGTATTTTCTTAATTGCTTAATGGAAAGACACTTCATATTGTTTATTGTATTGTGCATTAAACCAATTATTCTGTTCACTTGTGCACTTGCAGGACATCACATATAGTGGATGAGCTCAAAGTATCATTTCCCTCCGTTGCAGCCATCCCTGTAAATGTTCTTTTAACTGGGTAATCTCATTTACTGTCAAACATAATATCAAGCTAGTCTTGTAATGCATTCAATTCTCCTGTCCATTGATTGAAAATGTGAGTTTGTATCCAACGATCATAATGGGAAAGTAAAGAAATCTTGGTTGGTTCTCCTTAGTTACAGTGTCTGTAAATTGATCCCTATCATGCTAAAACCTTATCCTTTTCACAACTCTTTCCACTGAAGTATTTACAATATTTCTAAGATGAATAACTACCTTCCCAAAATGTTTTTGAGCTACCGTTATACTATTATTTTAATACATGTTGAAATAATTAGTGAATCTGGAGGACAGCGTTTATTTTGATGAATTAGATCTTTCGCTCGAGTCATGGAATAACCAGATTTGAAATAGGTAGTCAGTGATGCTATAAATCAATTGGACATGTGGAATGAGAAGAGTTTGCACCCCGTAGAGAGAAGTTATCATCTACTCCATTAATTCCATTTGTAATATGTTAGCATTCCTCCATTTGGCCCAACCAACTTCCTTTGAGTTACAGATGGATCTAATCATCCTTTTATCCACTTTTTCTAATTCAGTTTCTTGCTACATAACAACATCCGAATTGAGATTCAAAATCTTTGACTATAATTCTTTTGCTATAGTCTTTCAATAATCCTCTCACATTCTAGGATACAATCTTCATGAAGAACCATCTTCCCCTTCCTCGATCTTTTCAATACTTAACTTTTTGTAACTTACATCATATATCAGTTTCATACTTCTCTTTCTTGATTGAAATTCTCTCTCTCTAGGCTCTAGATTTACTTATTGTATGATTTGCTATATGTTTCTTTCTGATTTAACATTGTTCCTTATGTGATGTTGTCTTGTGAAGCTGGGAACAATTGGAGGTAGGCCATGAGTGTAATGCTAGAAATGGGGCCCAATGCCCCAACTATTTAACGGAATATATATAAGGTACAATGTGTTGGCCCAATGTTGGAAAGGGCAAGGTGTAACTCATACCTTTGTGGGTATAGATCAGTAACTTGGCGCCCGTCAATCTGAAGATTAATACTATTGACTTTCCTGATGTTAAACGTTGTAGGGTTAATTAATTGTCCTATGAAGTTTTTAGATGTGGGTGAGTCATATTGCTATGAGCATATTCTAATCGTTAATTTTACTATGCTCAATTTCTTAGGGCGTGTCTTCATATCTCGGAAGGTCTTTCTGATGTGCGATTTTTTCTAGAAGAGTTCCTTAGCAAGTGGAGTTTATTGAATGAAGAAATATATGTTCTTGTTGGCTCAAGAAATATTGACGACAGAGAACATTTTGATGGGCATGCTCAGTTGACTGTTGATGAATATCTCCAAGTTGTTGATATTTACCTCCAGACGCTCATAGAAATAGGTTTGAAGGATGTGGATCTTGCTGTTTCTTGGGTTGAGAAAGCTGCTTTACCTGAGGGAAAGCGTCAGGTAAATAGTTGTTTTTCATGTTCTACCGAATGCCATTTAAGAAAGTTTAATATTGGATTGGACATCAGAACATTTAGGTTGTCTATTAGTGGGGTTTTGATTTACAAAGAATTGAAAGTGAAATATGTCTTAGCCATGTTCTTGTGCTTATCCTTTGTTTCATTTATTTTTCTTCTCTAATGTTCCAACTATTTTTCCTTTTTCCAGGGCATCCAGCATGGTTTTGAATTTTTTTTGTTCTTTTTTATATATATCTGCTACGTCTACAACTTCGTAATAACTCTACTATTTTATCAATATTCATCAGTTCGCTGCATTTTTCATCTTTGTTAATGCATCTCAATAAATTCTCCAATGAATTTTGACGGATGAAGTATTTATTTAATCCTATCATTGCCGTCTTTATCAGTACTCTGTTGCATCAAATCCTTCCTCACAAGGATTTGGAAAACTCTTGGAGAGAAGTTTATGATTTGGTGAAAAATTGAATTGTCAACCGTGACTAAAGGCTTTTCCTTCAAAACTCTTTGGCTAGGTACTTTTGAGGAGGCTAGACTACCTGCAGTCTCTGAAAGCTGCCAGTTTGTCACAATCATCCCCTTCATCTTTGCTTAGAGATGACTATAAAACACGTTTATCTTCTTCAGAAGGACTTCAAGTATCAAGAGCTTCAAAAACAGCCTTAGAGCCTGGATATCATCAAGATGGAGGGAATGCTAACAGAGAAACAGTTCTAAGATTAAACAAACTTACAAAACCATGGTTTTGGCCGTTCCGTACCATCACATTGAAGTTCGGAAGTACTCGGCTCGTCATATCCACCGGAAGGATTGTGCTTACCTGTTTGCTAATCCTAATTTATTATCTGCTGCGAAGGAAATTAGCCACTTTGAAGAGGTATGTTTGTTGTCAAATAAAGAGCATAGTACTTCTTATAATTTTCAAAATCCTTTGATTCTAAATTCAAGTGGTAAAAACAATTTTCTACTTTCTTAAAGGCATACCGCTTACCTTGATTGATTGAAAGGCGTGTTTGATAGAAATTTGAAAACAAACTTGTATTTCATGTTTTCATATATGTGTTTAGTAGTAGATTCAGAAATTGAATTTTAGTTTAAATAATTGTTTTAAATGTATTTGATATTATATTTATAAACCATCAAAGTGGCTGTAGTTATCCATTGAATATTAGGTTGACTATAAACTATTATTAATTTATTTATGAACAAATTTTATATGAAATATTTTGTAATAGTATATATTTTATAATACATTGCATAATCCTTTTTTAATTGTTTAAAGAAATGAATCGAGTATATAACATGGAATATTGTATTTCTAGTGGTTTTTATCTTTATTTAATATAATTCTGCATTTTAAAAAATATATATGGATACATAGGAAACAAAAAATATATATTTTTATATTCTTAGAATTTATATTGTTAGGATCATAGAATTGAAAACAGTTTTAAGAAATAGAATCTAGATTGTCAGCCAAACACATATTTGTTGAAAAAACATAAAACAGAATCTACATTTCCAACCAAACCGTCTCTTAACCTCCTGTCTAAATGATTTGAATTTCTTTCTTCCTTTTTAGAGCTTAATCTTCTAGTTTATGGATACTTTTTCATTTTTATATCGATGAGAAGTTGTTCGTATAAAAAAAAATGTCGTAATTAGAAGATGGACAACATTGTTCATATAATTGCAGCAATGATGTTATCTTATGTTTCTCTTAATTCTTCACAATTTCGTGGAGGTTATTTGTTGCTGGTGAAATTATGTTAATCTTATGTTTGTTGTTGTAAACTCAGGATGGCTCAAAAACAGGGTTCGTCCATAAAGAAAGCAGTAGTAGACTTGTGGCAGCTTGCATTTTCATATCAAGTTAACCCTTTAGCAATTGCTCAACCCCTTTCTGGAGCAGCTCCTGGAGTCCCATGATTCTTTCTAAACCGTATTTGTATTCTGTCATTTCATACAAAGAAGCATTTTTCTTTAATGGGACTTCTCTTCCCTTTGCTTCATTGTGCTGCAGAACTCATTGAAGAATAAAATCAAGTTAAAGCTTACCATTTGGAAGATCA AAATATTTATGGAGGCAAAAATTCTAATGCGAATAAACAAAATATCATACCCTAATAAATACTAGAAATTTTGATTATACTGACGATTCGAGATTTCTTGTTCCTGTTCGTGTTCGGAGGGCAGTTCATCTTCTTTGTCTTTCATGTCTCCAGTCCACCAATTGATTTAATTACTCGACGCAACGTTATCTTCATCAAGTGCAATTCCATATTCAGTTTCTTACTCTTTGAAACCGACGGTGACCGACCATGGATGGCGGAGAAGCAATTTGGGAAGAGATCGAGCGCTCTGAGAGCTATCTTGTGTGCTCCATGTACGAGGAAGCATTAGGGCTAGCTTCCTCCGTTTTAAAGCGTATTTCTCAAGAGAAAAATGGCTGTGATAATGATATGATGGAATCAGCTGGTATGGTTTTAGTTCAATCTTTGAAGGAACTTGGAAGGACATCACATATAGTGGATGAGCTCAAAGTATCATTTCCCTCCGTTGCAGCCATCCCTGTAAATGTTCTTTTAACTGGGGCGTGTCTTCATATCTCGGAAGGTCTTTCTGATGTGCGATTTTTTCTAGAAGAGTTCCTTAGCAAGTGGAGTTTATTGAATGAAGAAATATATGTTCTTGTTGGCTCAAGAAATATTGACGACAGAGAACATTTTGATGGGCATGCTCAGTTGACTGTTGATGAATATCTCCAAGTTGTTGATATTTACCTCCAGACGCTCATAGAAATAGGTTTGAAGGATGTGGATCTTGCTGTTTCTTGGGTTGAGAAAGCTGCTTTACCTGAGGGAAAGCGTCAGGTACTTTTGAGGAGGCTAGACTACCTGCAGTCTCTGAAAGCTGCCAGTTTGTCACAATCATCCCCTTCATCTTTGCTTAGAGATGACTATAAAACACGTTTATCTTCTTCAGAAGGACTTCAAGTATCAAGAGCTTCAAAAACAGCCTTAGAGCCTGGATATCATCAAGATGGAGGGAATGCTAACAGAGAAACAGTTCTAAGATTAAACAAACTTACAAAACCATGGTTTTGGCCGTTCCGTACCATCACATTGAAGTTCGGAAGTACTCGGCTCGTCATATCCACCGGAAGGATTGTGCTTACCTGTTTGCTAATCCTAATTTATTATCTGCTGCGAAGGAAATTAGCCACTTTGAAGAGGATGGCTCAAAAACAGGGTTCGTCCATAAAGAAAGCAGTAGTAGACTTGTGGCAGCTTGCATTTTCATATCAAGTTAACCCTTTAGCAATTGCTCAACCCCTTTCTGGAGCAGCTCCTGGAGTCCCATGATTCTTTCTAAACCGTATTTGTATTCTGTCATTTCATACAAAGAAGCATTTTTCTTTAATGGGACTTCTCTTCCCTTTGCTTCATTGTGCTGCAGAACTCATTGAAGAATAAAATCAAGTTAAAGCTTACCATTTGGAAGATCA ATGGATGGCGGAGAAGCAATTTGGGAAGAGATCGAGCGCTCTGAGAGCTATCTTGTGTGCTCCATGTACGAGGAAGCATTAGGGCTAGCTTCCTCCGTTTTAAAGCGTATTTCTCAAGAGAAAAATGGCTGTGATAATGATATGATGGAATCAGCTGGTATGGTTTTAGTTCAATCTTTGAAGGAACTTGGAAGGACATCACATATAGTGGATGAGCTCAAAGTATCATTTCCCTCCGTTGCAGCCATCCCTGTAAATGTTCTTTTAACTGGGGCGTGTCTTCATATCTCGGAAGGTCTTTCTGATGTGCGATTTTTTCTAGAAGAGTTCCTTAGCAAGTGGAGTTTATTGAATGAAGAAATATATGTTCTTGTTGGCTCAAGAAATATTGACGACAGAGAACATTTTGATGGGCATGCTCAGTTGACTGTTGATGAATATCTCCAAGTTGTTGATATTTACCTCCAGACGCTCATAGAAATAGGTTTGAAGGATGTGGATCTTGCTGTTTCTTGGGTTGAGAAAGCTGCTTTACCTGAGGGAAAGCGTCAGGTACTTTTGAGGAGGCTAGACTACCTGCAGTCTCTGAAAGCTGCCAGTTTGTCACAATCATCCCCTTCATCTTTGCTTAGAGATGACTATAAAACACGTTTATCTTCTTCAGAAGGACTTCAAGTATCAAGAGCTTCAAAAACAGCCTTAGAGCCTGGATATCATCAAGATGGAGGGAATGCTAACAGAGAAACAGTTCTAAGATTAAACAAACTTACAAAACCATGGTTTTGGCCGTTCCGTACCATCACATTGAAGTTCGGAAGTACTCGGCTCGTCATATCCACCGGAAGGATTGTGCTTACCTGTTTGCTAATCCTAATTTATTATCTGCTGCGAAGGAAATTAGCCACTTTGAAGAGGATGGCTCAAAAACAGGGTTCGTCCATAAAGAAAGCAGTAGTAGACTTGTGGCAGCTTGCATTTTCATATCAAGTTAACCCTTTAGCAATTGCTCAACCCCTTTCTGGAGCAGCTCCTGGAGTCCCATGA MDGGEAIWEEIERSESYLVCSMYEEALGLASSVLKRISQEKNGCDNDMMESAGMVLVQSLKELGRTSHIVDELKVSFPSVAAIPVNVLLTGACLHISEGLSDVRFFLEEFLSKWSLLNEEIYVLVGSRNIDDREHFDGHAQLTVDEYLQVVDIYLQTLIEIGLKDVDLAVSWVEKAALPEGKRQVLLRRLDYLQSLKAASLSQSSPSSLLRDDYKTRLSSSEGLQVSRASKTALEPGYHQDGGNANRETVLRLNKLTKPWFWPFRTITLKFGSTRLVISTGRIVLTCLLILIYYLLRRKLATLKRMAQKQGSSIKKAVVDLWQLAFSYQVNPLAIAQPLSGAAPGVP
BLAST of Lsi05G003310 vs. TrEMBL
Match: A0A0A0L747_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G314740 PE=4 SV=1) HSP 1 Score: 523.1 bits (1346), Expect = 2.6e-145 Identity = 278/347 (80.12%), Postives = 312/347 (89.91%), Query Frame = 1
BLAST of Lsi05G003310 vs. TrEMBL
Match: B9SXW9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0974680 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 1.5e-84 Identity = 197/360 (54.72%), Postives = 237/360 (65.83%), Query Frame = 1
BLAST of Lsi05G003310 vs. TrEMBL
Match: V4UUV8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008766mg PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 3.7e-83 Identity = 183/345 (53.04%), Postives = 235/345 (68.12%), Query Frame = 1
BLAST of Lsi05G003310 vs. TrEMBL
Match: B9HBB3_POPTR (3-phosphoinositide-dependent protein kinase-1 OS=Populus trichocarpa GN=POPTR_0006s07830g PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 2.0e-81 Identity = 180/351 (51.28%), Postives = 240/351 (68.38%), Query Frame = 1
BLAST of Lsi05G003310 vs. TrEMBL
Match: F6HGI5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0130g00080 PE=4 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 2.9e-80 Identity = 187/355 (52.68%), Postives = 233/355 (65.63%), Query Frame = 1
BLAST of Lsi05G003310 vs. TAIR10
Match: AT3G10572.1 (AT3G10572.1 3-phosphoinositide-dependent protein kinase-1, putative) HSP 1 Score: 226.5 bits (576), Expect = 2.6e-59 Identity = 151/347 (43.52%), Postives = 206/347 (59.37%), Query Frame = 1
BLAST of Lsi05G003310 vs. NCBI nr
Match: gi|449456198|ref|XP_004145837.1| (PREDICTED: uncharacterized protein LOC101219185 isoform X1 [Cucumis sativus]) HSP 1 Score: 523.1 bits (1346), Expect = 3.7e-145 Identity = 278/347 (80.12%), Postives = 312/347 (89.91%), Query Frame = 1
BLAST of Lsi05G003310 vs. NCBI nr
Match: gi|659114422|ref|XP_008457045.1| (PREDICTED: uncharacterized protein LOC103496818 isoform X1 [Cucumis melo]) HSP 1 Score: 518.8 bits (1335), Expect = 7.1e-144 Identity = 273/347 (78.67%), Postives = 310/347 (89.34%), Query Frame = 1
BLAST of Lsi05G003310 vs. NCBI nr
Match: gi|778680814|ref|XP_011651401.1| (PREDICTED: uncharacterized protein LOC101219185 isoform X2 [Cucumis sativus]) HSP 1 Score: 490.3 bits (1261), Expect = 2.7e-135 Identity = 263/326 (80.67%), Postives = 294/326 (90.18%), Query Frame = 1
BLAST of Lsi05G003310 vs. NCBI nr
Match: gi|659114424|ref|XP_008457046.1| (PREDICTED: uncharacterized protein LOC103496818 isoform X2 [Cucumis melo]) HSP 1 Score: 484.6 bits (1246), Expect = 1.5e-133 Identity = 257/326 (78.83%), Postives = 291/326 (89.26%), Query Frame = 1
BLAST of Lsi05G003310 vs. NCBI nr
Match: gi|694364167|ref|XP_009361212.1| (PREDICTED: uncharacterized protein LOC103951531 [Pyrus x bretschneideri]) HSP 1 Score: 330.1 bits (845), Expect = 4.7e-87 Identity = 193/354 (54.52%), Postives = 238/354 (67.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|